Metagenome / Metatranscriptome Family F055963

Basic Information
Family ID	F055963
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	42 residues
Representative Sequence	MGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR
Number of Associated Samples	129
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.51 %
% of genes near scaffold ends (potentially truncated)	30.43 %
% of genes from short scaffolds (< 2000 bps)	88.41 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (92.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.696 % of family members)
Environment Ontology (ENVO)	Unclassified (40.580 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.826 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00196	GerE	46.38
PF05977	MFS_3	22.46
PF12697	Abhydrolase_6	5.07
PF07690	MFS_1	4.35
PF00561	Abhydrolase_1	4.35
PF13191	AAA_16	2.90
PF05331	DUF742	0.72
PF05960	DUF885	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	22.46
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.33 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.33 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.36 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	17.39 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.97 %
Unclassified	root	N/A	7.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.90 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %

Name	Rank	Taxonomy	Distribution
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	17.39 %
Unclassified	root	N/A	7.25 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.90 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.45 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	8.70 %
Unclassified	root	N/A	7.25 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.90 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.45 %
Sciscionella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella	0.72 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.25 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.80 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	4.35 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	2.17 %
Geodermatophilaceae bacterium URHB0048	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	2.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.90 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.45 %
unclassified Sciscionella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella	0.72 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.25 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.80 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	4.35 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	2.17 %
Geodermatophilaceae bacterium URHB0048	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	2.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.90 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.45 %
Sciscionella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella → Sciscionella sp.	0.72 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig02788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1992	Open in IMG/M
2170459005\|F1BAP7Q01DW5I8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
2199352024\|deeps__Contig_190064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300005147\|Ga0066821_1026419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300005159\|Ga0066808_1038458	Not Available	516	Open in IMG/M
3300005163\|Ga0066823_10157807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300005172\|Ga0066683_10465419	Not Available	774	Open in IMG/M
3300005175\|Ga0066673_10807654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300005179\|Ga0066684_10920121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	570	Open in IMG/M
3300005186\|Ga0066676_10404856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	920	Open in IMG/M
3300005327\|Ga0070658_10711844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300005331\|Ga0070670_100093532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2586	Open in IMG/M
3300005332\|Ga0066388_104023939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005336\|Ga0070680_100022374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5035	Open in IMG/M
3300005338\|Ga0068868_100184278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1733	Open in IMG/M
3300005338\|Ga0068868_101015179	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005345\|Ga0070692_11167526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300005353\|Ga0070669_101404138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300005364\|Ga0070673_100018301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5000	Open in IMG/M
3300005365\|Ga0070688_100451830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	961	Open in IMG/M
3300005434\|Ga0070709_10512885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	912	Open in IMG/M
3300005435\|Ga0070714_102506882	Not Available	500	Open in IMG/M
3300005437\|Ga0070710_11235031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	553	Open in IMG/M
3300005445\|Ga0070708_101203941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	708	Open in IMG/M
3300005458\|Ga0070681_10066933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3561	Open in IMG/M
3300005468\|Ga0070707_100188497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2011	Open in IMG/M
3300005545\|Ga0070695_100245612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1300	Open in IMG/M
3300005563\|Ga0068855_102089611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300005569\|Ga0066705_10580075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	691	Open in IMG/M
3300005764\|Ga0066903_108218829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005840\|Ga0068870_10130929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1457	Open in IMG/M
3300005842\|Ga0068858_100373100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1368	Open in IMG/M
3300005983\|Ga0081540_1000216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61035	Open in IMG/M
3300006173\|Ga0070716_101835969	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006581\|Ga0074048_13118591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300006605\|Ga0074057_11701157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300006606\|Ga0074062_12750551	Not Available	632	Open in IMG/M
3300006755\|Ga0079222_12244940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	544	Open in IMG/M
3300006755\|Ga0079222_12422680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300006800\|Ga0066660_11416658	Not Available	545	Open in IMG/M
3300006904\|Ga0075424_100107930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2938	Open in IMG/M
3300006954\|Ga0079219_10245823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1059	Open in IMG/M
3300007258\|Ga0099793_10087199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1431	Open in IMG/M
3300009098\|Ga0105245_13235865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300009177\|Ga0105248_11574213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300009792\|Ga0126374_10118958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1540	Open in IMG/M
3300010046\|Ga0126384_10153538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1775	Open in IMG/M
3300010046\|Ga0126384_10512408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1036	Open in IMG/M
3300010321\|Ga0134067_10116872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	926	Open in IMG/M
3300010321\|Ga0134067_10407313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300010337\|Ga0134062_10445501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	642	Open in IMG/M
3300010376\|Ga0126381_100980110	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300010396\|Ga0134126_12920095	Not Available	517	Open in IMG/M
3300011003\|Ga0138514_100086992	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012198\|Ga0137364_10928531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	659	Open in IMG/M
3300012200\|Ga0137382_10688731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	732	Open in IMG/M
3300012201\|Ga0137365_10320070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1148	Open in IMG/M
3300012208\|Ga0137376_11144924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Sciscionella → unclassified Sciscionella → Sciscionella sp.	665	Open in IMG/M
3300012285\|Ga0137370_10162161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1298	Open in IMG/M
3300012351\|Ga0137386_10183912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300012361\|Ga0137360_10527042	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012474\|Ga0157356_1016338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300012496\|Ga0157353_1018685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300012500\|Ga0157314_1011291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	785	Open in IMG/M
3300012507\|Ga0157342_1003711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1324	Open in IMG/M
3300012515\|Ga0157338_1036267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300012927\|Ga0137416_10697212	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012951\|Ga0164300_10121437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1181	Open in IMG/M
3300012985\|Ga0164308_11327589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	654	Open in IMG/M
3300012986\|Ga0164304_10225044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300015265\|Ga0182005_1238582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300015371\|Ga0132258_12914357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1188	Open in IMG/M
3300015372\|Ga0132256_100390713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1492	Open in IMG/M
3300015373\|Ga0132257_101062526	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300015373\|Ga0132257_101218527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300016357\|Ga0182032_10740729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300017792\|Ga0163161_11584972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300017937\|Ga0187809_10040208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1501	Open in IMG/M
3300018431\|Ga0066655_11356106	Not Available	514	Open in IMG/M
3300018482\|Ga0066669_11093110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	720	Open in IMG/M
3300019875\|Ga0193701_1042620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300019885\|Ga0193747_1042384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300020082\|Ga0206353_10775593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1988	Open in IMG/M
3300020170\|Ga0179594_10365795	Not Available	547	Open in IMG/M
3300020199\|Ga0179592_10305599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	706	Open in IMG/M
3300021088\|Ga0210404_10810624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300021401\|Ga0210393_11627749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300021403\|Ga0210397_10002889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10688	Open in IMG/M
3300021445\|Ga0182009_10267456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300021560\|Ga0126371_11877308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	719	Open in IMG/M
3300024245\|Ga0247677_1023759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300024249\|Ga0247676_1019858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300024254\|Ga0247661_1049060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	772	Open in IMG/M
3300024279\|Ga0247692_1024046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300025904\|Ga0207647_10150860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0048	1358	Open in IMG/M
3300025905\|Ga0207685_10201878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	935	Open in IMG/M
3300025908\|Ga0207643_10106318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1649	Open in IMG/M
3300025910\|Ga0207684_11010514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300025912\|Ga0207707_10121052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2288	Open in IMG/M
3300025914\|Ga0207671_11164944	Not Available	604	Open in IMG/M
3300025920\|Ga0207649_10365852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1071	Open in IMG/M
3300025922\|Ga0207646_10078678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2947	Open in IMG/M
3300025922\|Ga0207646_11355930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300025923\|Ga0207681_10494438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1001	Open in IMG/M
3300025928\|Ga0207700_10858161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	812	Open in IMG/M
3300025929\|Ga0207664_11809810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300025931\|Ga0207644_10213714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1526	Open in IMG/M
3300025933\|Ga0207706_10047348	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300025940\|Ga0207691_10756366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300025960\|Ga0207651_10433881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1124	Open in IMG/M
3300026089\|Ga0207648_10776295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	891	Open in IMG/M
3300026557\|Ga0179587_10111320	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300027725\|Ga0209178_1111622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300027775\|Ga0209177_10513213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300027817\|Ga0209112_10248211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300028755\|Ga0307316_10209693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300028824\|Ga0307310_10311777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300031170\|Ga0307498_10058057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300031231\|Ga0170824_104644311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300031718\|Ga0307474_10173618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1634	Open in IMG/M
3300031720\|Ga0307469_11993616	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031723\|Ga0318493_10238072	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300031740\|Ga0307468_100488772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	972	Open in IMG/M
3300031771\|Ga0318546_11315188	Not Available	508	Open in IMG/M
3300031805\|Ga0318497_10340853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	837	Open in IMG/M
3300032009\|Ga0318563_10476968	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032068\|Ga0318553_10061581	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300032770\|Ga0335085_10126771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3246	Open in IMG/M
3300032770\|Ga0335085_10147748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2954	Open in IMG/M
3300032770\|Ga0335085_11471678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	711	Open in IMG/M
3300032770\|Ga0335085_11732529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300032828\|Ga0335080_10009673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10085	Open in IMG/M
3300032955\|Ga0335076_10924656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300033004\|Ga0335084_10064034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3802	Open in IMG/M
3300033134\|Ga0335073_10107069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	3603	Open in IMG/M
3300033158\|Ga0335077_10267654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1886	Open in IMG/M
3300033475\|Ga0310811_10793799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300034817\|Ga0373948_0019064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1294	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.09%
Host-Associated	Host-Associated	23.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.36%
Plants	Host-Associated → Plants	23.91%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.59%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.17%
Loam	Environmental → Terrestrial → Soil → Loam	15.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.17%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055963

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00740190	2166559006	Grass Soil	VSNSLTASLTDLIFISIVPTLLLAGWLIVIFRATRDYDKP
E41_04880500	2170459005	Grass Soil	MGYVGNSLTASLTELIFISIVPTFLLAGWLIVIFR
deeps_03605740	2199352024	Soil	MGYVGNSLTASLTELIFISIVPTLLLAGWLIVIFRATRDYDRR
Ga0066821_10264191	3300005147	Soil	MGYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0066808_10384581	3300005159	Soil	MGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR*
Ga0066823_101578071	3300005163	Soil	MGYVGNSLTASLTELIFISIVPTFLLAGWLIVIFRATRDYDRR*
Ga0066683_104654192	3300005172	Soil	MGYVGNSLTASLTDLVFIAVIPTILLVGWLIVIFRATRDYDRRD*
Ga0066673_108076542	3300005175	Soil	MGYVDNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0066684_109201212	3300005179	Soil	MGYVGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0066676_104048562	3300005186	Soil	VDTILSASLTELIFISIIPTVLLAGWLIVIFRATRDYDKR*
Ga0070658_107118442	3300005327	Corn Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0070670_1000935323	3300005331	Switchgrass Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRAARDYDRR*
Ga0066388_1040239391	3300005332	Tropical Forest Soil	ATMGSVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0070680_1000223743	3300005336	Corn Rhizosphere	MGCVGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR*
Ga0068868_1001842782	3300005338	Miscanthus Rhizosphere	MGYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR*
Ga0068868_1010151792	3300005338	Miscanthus Rhizosphere	MGYVGNSLTASLTALIFISIVPTLLLAGWLIVIFRATRDYDRR*
Ga0070692_111675261	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PSTATMGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR*
Ga0070669_1014041382	3300005353	Switchgrass Rhizosphere	ATMGYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0070673_1000183013	3300005364	Switchgrass Rhizosphere	VGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0070688_1004518302	3300005365	Switchgrass Rhizosphere	MGCVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0070709_105128852	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKRD*
Ga0070714_1025068822	3300005435	Agricultural Soil	MGCVGNSLTASLTELIFISIVPTALLIGWLIAIFRATRDYDRR*
Ga0070710_112350312	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGYMGNSLTASLTSLLFISIVPTFLLAGWLIVIFRATRDYDKRD*
Ga0070708_1012039412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGYVGNSLTASLTALIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0070681_100669333	3300005458	Corn Rhizosphere	VGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR*
Ga0070707_1001884972	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGCVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR*
Ga0070695_1002456122	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGYVGNSLTASLTALIFISIVPTFLLAGWLIVIFRATRDYDRR*
Ga0068855_1020896111	3300005563	Corn Rhizosphere	MGYVGNSLTASLTALLFISIVPTFLLAGWLIVIFRATRDYDRR*
Ga0066705_105800751	3300005569	Soil	ASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0066903_1082188291	3300005764	Tropical Forest Soil	AATMGYVDNSLTASLTELIFISIVPTVLLAGWLIAIFRATRDYDRR*
Ga0068870_101309292	3300005840	Miscanthus Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDKRD*
Ga0068858_1003731002	3300005842	Switchgrass Rhizosphere	VGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0081540_100021611	3300005983	Tabebuia Heterophylla Rhizosphere	VGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0070716_1018359691	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGYVGNSLTASLTDLIFISIVPTVLLAGWLIVIFWATRDYDRR*
Ga0074048_131185911	3300006581	Soil	GNSLTASLTSLIFISIVPTFLLAGWLIMIFRATRDYDKRD*
Ga0074057_117011572	3300006605	Soil	MGYVGNSLTASLTELIFISIVPTLLLAGWLIVIFRATRDYDRR*
Ga0074062_127505512	3300006606	Soil	MGYMGNSLTASLTSLIFISIVPTFLLAGWLIMIFRATRDYDKRD*
Ga0079222_122449402	3300006755	Agricultural Soil	MGYVGNSLTASLTELIFISIIPTALLAGWLIAIFRATRDYDRR*
Ga0079222_124226802	3300006755	Agricultural Soil	LTASLTELIFISIIPTALLAGWLIVIFRATRDYDRR*
Ga0066660_114166582	3300006800	Soil	VNSSLTTSLAGLVFIAVVPTLLLAGWLIVIFRATRDYDPPSPGAR
Ga0075424_1001079302	3300006904	Populus Rhizosphere	MGHVGNSLTASLTALIFISIVPTLLLAGWLIVIFRATRDYDRR*
Ga0079219_102458232	3300006954	Agricultural Soil	MGYVGNSLTASLTELIFISIIPTALLAGWLIAIFRATRDYD
Ga0099793_100871992	3300007258	Vadose Zone Soil	VNSQLSASLTDLIFISVIPTLLLAGWLIVIFRSARDYDRRD*
Ga0105245_132358652	3300009098	Miscanthus Rhizosphere	MGCVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0105248_115742132	3300009177	Switchgrass Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFR
Ga0126374_101189581	3300009792	Tropical Forest Soil	MGYVDNSLTASLTELIFISIVPTVLLAGWLIAIFRATRDYDRR*
Ga0126384_101535381	3300010046	Tropical Forest Soil	MGFVGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0126384_105124082	3300010046	Tropical Forest Soil	MGYVDNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0134067_101168722	3300010321	Grasslands Soil	MGYMGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0134067_104073132	3300010321	Grasslands Soil	VNSSLTTSLAGLVFIAVVPTLLLAGWLIVIFRATRDYD
Ga0134062_104455012	3300010337	Grasslands Soil	MGYVGNSLTASLTDLVFISIVPTLLLVGWLIVIFRATRDYDRR*
Ga0126381_1009801103	3300010376	Tropical Forest Soil	MGYVPSHLTASLGDLIAISIVPTLLLAGWLISIYRAARSYD
Ga0134126_129200952	3300010396	Terrestrial Soil	MRYVGNSQTASLTALIFISIVPTVLLAGWLIVIFRSTRDYDRR*
Ga0138514_1000869922	3300011003	Soil	VDTIVSASLTELIFISIIPTVLLAGWLIAIFRATRDYDKR*
Ga0137364_109285312	3300012198	Vadose Zone Soil	MAHPALDSDNGYMGNSLTASLTSLIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0137382_106887311	3300012200	Vadose Zone Soil	LGRRTIGYVNSQTASLAGRVFIAVVPTLLLAGWLIVIFRATRDYDKRD*
Ga0137365_103200702	3300012201	Vadose Zone Soil	MGYVGNSLTASLTSLIFISIVPTVLLAGWLIAIFRATRDYDRR*
Ga0137376_111449241	3300012208	Vadose Zone Soil	TMGHVGNSLTASLTALIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0137370_101621611	3300012285	Vadose Zone Soil	MGYVGNSLTASLTELIFISIVPTLLLAGWLIAIFRAPRDYDRR*
Ga0137386_101839121	3300012351	Vadose Zone Soil	MCSRLGRRTIGYVSNSLTASLTDLVFIAVVPTLLLVGWLIVIFRSTRDYD
Ga0137360_105270422	3300012361	Vadose Zone Soil	VDTILSASLTELIFISIVPTALLAGWLIVIFRATRDYDKP*
Ga0157356_10163382	3300012474	Unplanted Soil	MGDVGNSLTASLTELIFISIIPTALLAGWLIVIFRATRDYDRR*
Ga0157353_10186852	3300012496	Unplanted Soil	ASLTELIFISIVPTALLAGWLIVIFRATRDYDRR*
Ga0157314_10112912	3300012500	Arabidopsis Rhizosphere	MGSVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0157342_10037112	3300012507	Arabidopsis Rhizosphere	MGDVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0157338_10362672	3300012515	Arabidopsis Rhizosphere	TATMGYVGNSLTASLTELIFISIIPTALLAGWLIAIFRATRDYDRR*
Ga0137416_106972121	3300012927	Vadose Zone Soil	MGYVGNSLTASLTSLIFISIVPTVLLAGWLIVIFRASRDYDRR*
Ga0164300_101214372	3300012951	Soil	MGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDRR*
Ga0164308_113275892	3300012985	Soil	MAYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKRD*
Ga0164304_102250442	3300012986	Soil	MGCVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDKRD*
Ga0182005_12385822	3300015265	Rhizosphere	MGSVGNSLTATLTELIFISIVPTLLLAGWLIAIFRATRDYDRR*
Ga0132258_129143572	3300015371	Arabidopsis Rhizosphere	GNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR*
Ga0132256_1003907132	3300015372	Arabidopsis Rhizosphere	MGSVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR*
Ga0132257_1010625262	3300015373	Arabidopsis Rhizosphere	VDKLSASLGDLIWIAIVPTLLLAGWLITIFRAAKDYDRPSP
Ga0132257_1012185272	3300015373	Arabidopsis Rhizosphere	MGYVGNSLTASLTELIFISIIPTALLAGWLIAIFRAT
Ga0182032_107407292	3300016357	Soil	MGKVDSHLTASLGDLIAIATVPTLLLAGWLIVIFRATRDYDRRD
Ga0163161_115849721	3300017792	Switchgrass Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0187809_100402082	3300017937	Freshwater Sediment	VGNSLTASLTDLLFIAIVPTALLAGWLIAIFRATRDYDRRD
Ga0066655_113561062	3300018431	Grasslands Soil	MGYVGNSLTASLTELIFISIIPTVLLAGWLIVIFRATRDYDKR
Ga0066669_110931102	3300018482	Grasslands Soil	MGYVGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR
Ga0193701_10426202	3300019875	Soil	MGYVGNSLTASLTALIFISIVPTFLLAGWLIVIFRATRDYDRR
Ga0193747_10423842	3300019885	Soil	MRYVGNSLTASLTALIFISVVPTFLLAGWLIVIFRATRDYDKRD
Ga0206353_107755932	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MGYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR
Ga0179594_103657951	3300020170	Vadose Zone Soil	MGYVGNSLTASLTSLIFISIVPTVLLAGWLIVIFRASRDYDRR
Ga0179592_103055992	3300020199	Vadose Zone Soil	VNSQLSASLTDLIFISVIPTLLLAGWLIVIFRSARDYDRRD
Ga0210404_108106242	3300021088	Soil	VGNSLTASLTDLLFIAIVPTALLAGWLIVIFRATRDYDRR
Ga0210393_116277492	3300021401	Soil	VGNSLTASLTDLLFIAIVPTALLAGWLIVIFRATRDYDRRD
Ga0210397_100028898	3300021403	Soil	MGYVGNSLTASLTELIFISIVPTALLVGWLIVIFRATRDYDRR
Ga0182009_102674562	3300021445	Soil	MGSVGNSLTATLTELIFISIVPTLLLAGWLIAIFRATRDYDRR
Ga0126371_118773082	3300021560	Tropical Forest Soil	VDKLSASLGDLIWIAIIPTLLLAGWLIAIFLAAKDYDRPSPG
Ga0247677_10237591	3300024245	Soil	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYD
Ga0247676_10198582	3300024249	Soil	MGCVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDKRD
Ga0247661_10490602	3300024254	Soil	STATMGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0247692_10240462	3300024279	Soil	MGCVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0207647_101508602	3300025904	Corn Rhizosphere	MGCVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR
Ga0207685_102018782	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR
Ga0207643_101063181	3300025908	Miscanthus Rhizosphere	LAATMGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKRD
Ga0207684_110105142	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGYVGNSLTASLTALIFISIVPTVLLAGWLIVIFRATRDYDRR
Ga0207707_101210522	3300025912	Corn Rhizosphere	VGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR
Ga0207671_111649442	3300025914	Corn Rhizosphere	MGYVGNSLTASLTALIFISIVPTLLLAGWLIVIFRATRDYDRR
Ga0207649_103658521	3300025920	Corn Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATR
Ga0207646_100786781	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SQLSASLGDLIFIAVVPTILLAGWLIIIFRATRDYDKPD
Ga0207646_113559301	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGNSLTASLTALIFISIVPTVLLAGWLIVIFRATRDYDRR
Ga0207681_104944382	3300025923	Switchgrass Rhizosphere	IPPSTATMGYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATRDYDRR
Ga0207700_108581612	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKRD
Ga0207664_118098102	3300025929	Agricultural Soil	MGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKR
Ga0207644_102137142	3300025931	Switchgrass Rhizosphere	MGCVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR
Ga0207706_100473484	3300025933	Corn Rhizosphere	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRGT
Ga0207691_107563662	3300025940	Miscanthus Rhizosphere	PSTATMGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR
Ga0207651_104338811	3300025960	Switchgrass Rhizosphere	VGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDRR
Ga0207648_107762952	3300026089	Miscanthus Rhizosphere	VGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0179587_101113203	3300026557	Vadose Zone Soil	VDTILSASLTELIFISIVPTALLAGWLIVIFRATRDYDKP
Ga0209178_11116222	3300027725	Agricultural Soil	MGYVGNSLTASLTELIFISIIPTALLAGWLIAIFRATRDYDRR
Ga0209177_105132132	3300027775	Agricultural Soil	MGSVGNSLTASLTELIFISIVPTLLLAGWLIAIFRATRDYDRR
Ga0209112_102482111	3300027817	Forest Soil	MTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0307316_102096932	3300028755	Soil	PLAATMGYVGNSLTASLTALIFISIVPTFLLAGWLIVIFRATRDYDRR
Ga0307310_103117771	3300028824	Soil	MGYMGNSLTASLTSLLFISIVPTFLLAGWLIVIFRATR
Ga0307498_100580572	3300031170	Soil	MRPGTATMGSVGNSLTASLTELIFISIVPTFLLAGWLIVIFRATRDYDRR
Ga0170824_1046443112	3300031231	Forest Soil	VSNSLTASLTDLIFISVVPTLLLAGWLIVIFRATRDYDKRP
Ga0307474_101736182	3300031718	Hardwood Forest Soil	PLAATMGYMGNSLTASLTSLLFISIVPTALLAGWLIVIFRATRDYDKRD
Ga0307469_119936161	3300031720	Hardwood Forest Soil	MGYVGNSLTASLTALLFISIVPTFLLAGWLIVIFRATRDYDRR
Ga0318493_102380721	3300031723	Soil	VDKLSASLGDLIWIAIVPTLLLAGWLIAIFRAAKDYD
Ga0307468_1004887721	3300031740	Hardwood Forest Soil	MGYVGNSLTASLTVLIFISIVPTVLLAGWLIVIFRATRDSDRR
Ga0318546_113151882	3300031771	Soil	VGNCLTASLTDLLFIAIVPTALLAGWLIAIFRATRDYDRRD
Ga0318497_103408532	3300031805	Soil	VGNSLTASLTDLLFIAIVPTALLAGWLTAIFRATRDYDRRD
Ga0318563_104769681	3300032009	Soil	VDKLSVSLGDLIWIAVVPTLLLAGWLIAIFRAARDYD
Ga0318553_100615811	3300032068	Soil	VDKLSASLGDLIWIAIVPTLLLAGWLIAIFRAAKDYDRPS
Ga0335085_101267712	3300032770	Soil	MGSVGNSLTASLTELIFISIVPTLLLAGWLITIFRATRDYDRR
Ga0335085_101477483	3300032770	Soil	VDSHLSASLGEIIVIAIVPAALLAGWLIAIFRATRDYDRPD
Ga0335085_114716782	3300032770	Soil	MRYVGNSLTASLTELIFISIVPTALLAGWLIAIFRATRDYDRR
Ga0335085_117325292	3300032770	Soil	VGNSLTASLTELIFISIVPTFLLAGWLIAIFRATRDYDRR
Ga0335080_100096734	3300032828	Soil	VDSHLSASLGDLIVIAIVPTALLAGWLIAIFRATRDYDRRD
Ga0335076_109246562	3300032955	Soil	MEYVGNSLTASLTELIFISIVPTVLLAGWLIVIFRAARDYDRR
Ga0335084_100640341	3300033004	Soil	VGNSLTASLTELIFISIVPTLLLAGWLITIFRATRDYDRR
Ga0335073_101070692	3300033134	Soil	MGSVGNSLTASLTELIFISIVPTVLLAGWLIVIFRATKDYDRRD
Ga0335077_102676543	3300033158	Soil	MGSVGNSLTASLTELIFISIVPTFLLAGWLIAIFRATRDYDRR
Ga0310811_107937991	3300033475	Soil	MGYVGNSLTASLTELIFISIVPTALLAGWLIAIFRAT
Ga0373948_0019064_856_990	3300034817	Rhizosphere Soil	MGYVGNSLTASLTELIFISIVPTALLAGWLIVIFRATRDYDKRD

Hidden Markov Model


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