Metagenome / Metatranscriptome Family F055960

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	52 residues
Representative Sequence	MDELSKLGGFALLGDADPVPQSLLLSYPEQAKTLKLLYEVSRELTSILDREE
Number of Associated Samples	111
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.49 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	90.58 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.681 % of family members)
Environment Ontology (ENVO)	Unclassified (37.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.928 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.25% β-sheet: 0.00% Coil/Unstructured: 53.75%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04116	FA_hydroxylase	10.14
PF02775	TPP_enzyme_C	4.35
PF02698	DUF218	4.35
PF13620	CarboxypepD_reg	3.62
PF03703	bPH_2	2.90
PF04389	Peptidase_M28	2.17
PF03551	PadR	1.45
PF07676	PD40	1.45
PF13185	GAF_2	0.72
PF13492	GAF_3	0.72
PF03306	AAL_decarboxy	0.72
PF13505	OMP_b-brl	0.72
PF17147	PFOR_II	0.72
PF01590	GAF	0.72
PF13581	HATPase_c_2	0.72
PF06808	DctM	0.72
PF02954	HTH_8	0.72
PF04773	FecR	0.72
PF03544	TonB_C	0.72
PF00155	Aminotran_1_2	0.72
PF07228	SpoIIE	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	10.14
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	4.35
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	4.35
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	2.90
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	2.90
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.45
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.45
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.45
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3527	Alpha-acetolactate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.54 %
Unclassified	root	N/A	22.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.54 %
Unclassified	root	N/A	22.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.54 %
Unclassified	root	N/A	22.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.49 %
Unclassified	root	N/A	22.46 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.81 %
Unclassified	root	N/A	22.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.17 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.90 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.45 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.72 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.72 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.17 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.90 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.45 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.72 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.74 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.90 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.45 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.72 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.72 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.74 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.90 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1.45 %
Parcubacteria group bacterium GW2011_GWA2_47_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_7	0.72 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Acidobacteria bacterium 13_1_20CM_58_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10101096	Not Available	732	Open in IMG/M
3300002562\|JGI25382J37095_10261581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	521	Open in IMG/M
3300004080\|Ga0062385_10205264	Not Available	1067	Open in IMG/M
3300004092\|Ga0062389_100995858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1023	Open in IMG/M
3300004267\|Ga0066396_10120045	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005167\|Ga0066672_10782767	Not Available	602	Open in IMG/M
3300005332\|Ga0066388_102453380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	947	Open in IMG/M
3300005435\|Ga0070714_101174080	Not Available	749	Open in IMG/M
3300005439\|Ga0070711_100381219	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300005447\|Ga0066689_10025828	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300005459\|Ga0068867_101661462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005467\|Ga0070706_100200219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1865	Open in IMG/M
3300005468\|Ga0070707_102180373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005518\|Ga0070699_100430208	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005552\|Ga0066701_10515755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005568\|Ga0066703_10456634	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005586\|Ga0066691_10080536	All Organisms → cellular organisms → Bacteria → Acidobacteria	1801	Open in IMG/M
3300005591\|Ga0070761_10199268	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005921\|Ga0070766_11147336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006052\|Ga0075029_100351221	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300006174\|Ga0075014_100124311	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300006796\|Ga0066665_11046507	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300006797\|Ga0066659_11868980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006804\|Ga0079221_10449220	Not Available	818	Open in IMG/M
3300006852\|Ga0075433_11562968	Not Available	569	Open in IMG/M
3300007265\|Ga0099794_10069752	All Organisms → cellular organisms → Bacteria → Acidobacteria	1720	Open in IMG/M
3300007265\|Ga0099794_10091240	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300007265\|Ga0099794_10691529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300009038\|Ga0099829_11529811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300009088\|Ga0099830_11037850	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300009089\|Ga0099828_10433368	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300009089\|Ga0099828_11324517	Not Available	637	Open in IMG/M
3300009090\|Ga0099827_10931522	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300009090\|Ga0099827_11223311	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300009090\|Ga0099827_11850015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009143\|Ga0099792_10859168	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300010043\|Ga0126380_11996010	Not Available	531	Open in IMG/M
3300010046\|Ga0126384_11062639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	740	Open in IMG/M
3300010303\|Ga0134082_10031485	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300010343\|Ga0074044_10478303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300010358\|Ga0126370_10713625	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010359\|Ga0126376_10424905	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300010360\|Ga0126372_11920784	Not Available	637	Open in IMG/M
3300010361\|Ga0126378_10152595	All Organisms → cellular organisms → Bacteria → Acidobacteria	2353	Open in IMG/M
3300010376\|Ga0126381_102332143	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010396\|Ga0134126_10527767	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358	Open in IMG/M
3300011120\|Ga0150983_14106122	Not Available	601	Open in IMG/M
3300011269\|Ga0137392_10048926	Not Available	3172	Open in IMG/M
3300011271\|Ga0137393_10136456	All Organisms → cellular organisms → Bacteria → Acidobacteria	2036	Open in IMG/M
3300012096\|Ga0137389_10017750	All Organisms → cellular organisms → Bacteria	4933	Open in IMG/M
3300012189\|Ga0137388_10427126	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300012189\|Ga0137388_10978904	Not Available	781	Open in IMG/M
3300012198\|Ga0137364_10523736	Not Available	892	Open in IMG/M
3300012198\|Ga0137364_11197238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012198\|Ga0137364_11415134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012202\|Ga0137363_10250726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1438	Open in IMG/M
3300012203\|Ga0137399_10843543	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300012205\|Ga0137362_10450059	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300012205\|Ga0137362_10597063	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300012206\|Ga0137380_11334896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300012207\|Ga0137381_11802694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012210\|Ga0137378_10889241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300012211\|Ga0137377_11625592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012351\|Ga0137386_10207953	Not Available	1405	Open in IMG/M
3300012363\|Ga0137390_10024586	All Organisms → cellular organisms → Bacteria → Acidobacteria	5652	Open in IMG/M
3300012363\|Ga0137390_11197805	Not Available	707	Open in IMG/M
3300012405\|Ga0134041_1204089	Not Available	708	Open in IMG/M
3300012582\|Ga0137358_10352333	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300012582\|Ga0137358_10768760	Not Available	642	Open in IMG/M
3300012683\|Ga0137398_10097546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1843	Open in IMG/M
3300012683\|Ga0137398_10364810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300012923\|Ga0137359_10988604	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_7	723	Open in IMG/M
3300012923\|Ga0137359_11204417	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300012924\|Ga0137413_11017319	Not Available	651	Open in IMG/M
3300012925\|Ga0137419_10588387	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300012925\|Ga0137419_10610184	Not Available	877	Open in IMG/M
3300015052\|Ga0137411_1038160	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300015052\|Ga0137411_1056762	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300015052\|Ga0137411_1313331	Not Available	4957	Open in IMG/M
3300015054\|Ga0137420_1425431	All Organisms → cellular organisms → Bacteria → Acidobacteria	4045	Open in IMG/M
3300015241\|Ga0137418_10127082	All Organisms → cellular organisms → Bacteria → Acidobacteria	2268	Open in IMG/M
3300016404\|Ga0182037_10352706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1199	Open in IMG/M
3300017936\|Ga0187821_10474225	Not Available	521	Open in IMG/M
3300018086\|Ga0187769_11164813	Not Available	583	Open in IMG/M
3300018468\|Ga0066662_10521074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300018482\|Ga0066669_11421708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300020580\|Ga0210403_10227719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_58_21	1529	Open in IMG/M
3300020580\|Ga0210403_10284634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1355	Open in IMG/M
3300020581\|Ga0210399_10969097	Not Available	687	Open in IMG/M
3300020583\|Ga0210401_10129653	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300021170\|Ga0210400_10605379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300021170\|Ga0210400_11185508	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300021401\|Ga0210393_10283024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1346	Open in IMG/M
3300021401\|Ga0210393_10782037	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300021406\|Ga0210386_11646420	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300021420\|Ga0210394_11428675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300021477\|Ga0210398_10885141	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300021479\|Ga0210410_10390311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300021479\|Ga0210410_11702674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300022726\|Ga0242654_10180086	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300024179\|Ga0247695_1000889	All Organisms → cellular organisms → Bacteria	4343	Open in IMG/M
3300024271\|Ga0224564_1031836	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300025910\|Ga0207684_10202476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300025910\|Ga0207684_11006262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300026088\|Ga0207641_11730722	Not Available	627	Open in IMG/M
3300026277\|Ga0209350_1129778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300026301\|Ga0209238_1254615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300026557\|Ga0179587_10229467	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300026557\|Ga0179587_10829167	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300027297\|Ga0208241_1086068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300027655\|Ga0209388_1031920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300027660\|Ga0209736_1124786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300027737\|Ga0209038_10255997	Not Available	524	Open in IMG/M
3300027829\|Ga0209773_10459003	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300027846\|Ga0209180_10164270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1280	Open in IMG/M
3300027884\|Ga0209275_10082718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1612	Open in IMG/M
3300027903\|Ga0209488_10649071	Not Available	761	Open in IMG/M
3300028047\|Ga0209526_10503317	Not Available	789	Open in IMG/M
3300028536\|Ga0137415_10522796	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300028536\|Ga0137415_10703518	Not Available	823	Open in IMG/M
3300028536\|Ga0137415_10807292	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300031057\|Ga0170834_112868964	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300031708\|Ga0310686_118651580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300031718\|Ga0307474_10802551	Not Available	744	Open in IMG/M
3300031720\|Ga0307469_10935395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300031720\|Ga0307469_12517636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031754\|Ga0307475_10014609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5347	Open in IMG/M
3300031754\|Ga0307475_10584570	Not Available	894	Open in IMG/M
3300031754\|Ga0307475_10767529	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300031792\|Ga0318529_10156099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1051	Open in IMG/M
3300031912\|Ga0306921_10742133	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300031941\|Ga0310912_10725390	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300032008\|Ga0318562_10321931	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300032009\|Ga0318563_10583760	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300032052\|Ga0318506_10162910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300032892\|Ga0335081_10279860	All Organisms → cellular organisms → Bacteria → Acidobacteria	2225	Open in IMG/M
3300032895\|Ga0335074_11298526	Not Available	601	Open in IMG/M
3300033290\|Ga0318519_10338700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.75%
Aquatic	Environmental → Aquatic	5.07%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.75%
Freshwater	Environmental → Aquatic → Freshwater	3.62%
Sediment	Environmental → Aquatic → Sediment	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.54%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101010961	3300001471	Forest Soil	VAHSKMDDLSKLSSYAILGDVDPIPQSLLTAFPEQAKTLALL
JGI25382J37095_102615811	3300002562	Grasslands Soil	MDDLSKLGAFALLGDADPVPQSLFLTHPEQAKTLMLLYEVSRELTSILDREELLRR
Ga0062385_102052643	3300004080	Bog Forest Soil	MEQPTRLAQKMEDLSKLSSYAILGDVDPVPRSLLTAFPEQAKTLTLLYEVSRE
Ga0062389_1009958581	3300004092	Bog Forest Soil	VEDISQLGAYGILGDVDPVPPSFLNAYPEQAKTLALLYDVSRELTSILDRE
Ga0066396_101200452	3300004267	Tropical Forest Soil	MEESAKLAPLSIEGDAHPVPQSLFLVFPEQAKTLTLLYDVSRELTAILDRETL
Ga0066672_107827672	3300005167	Soil	MEDLSKIGSFALLGDADPVPQSLFLSHPDQANTLTLLYEVSREVTSILDREELLRRV
Ga0066388_1024533802	3300005332	Tropical Forest Soil	LDDPAKLGSFALLGEADPVPQSLFVAYPEQAKTLTLLHDVSRELASILD
Ga0070714_1011740801	3300005435	Agricultural Soil	MDEAAKLAPLLVGDADPVPPSLFTSFPEQANTLSLLYEVSREITSIL
Ga0070711_1003812193	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEDLSKLASYALLGDADPVPVSLLTAFPEQAKTLTLLYEVSRELTSILDREELLRR
Ga0066689_100258285	3300005447	Soil	MEDVSKFGAFALLGDADPVPQSLFASHPEQAKTLLLLYEVSRELTSILDREELL
Ga0068867_1016614622	3300005459	Miscanthus Rhizosphere	MDDVAKVAALPLTGEADPVPQSLLLSFPEQAKTLGLLYDVSRELTSILD
Ga0070706_1002002194	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSILDREELLGRIAER
Ga0070707_1021803731	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSILDREE
Ga0070699_1004302081	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDELSQLASQTDPIPQSLLATFPEQAKTLGLLYDVSRELTSILDREELLRRI
Ga0066701_105157551	3300005552	Soil	MSWLGSTLSPMDELSQLASLPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSILDREE
Ga0066703_104566342	3300005568	Soil	MEDLSKIGSFALLGDADPVPQSLFLSHPDQANTLALLYEVSREVTSILDRE
Ga0066691_100805363	3300005586	Soil	MADLSKVDAFALLGDADPVPQSLFLSHPEQAQTLALLYEVSREVTSILD
Ga0070761_101992683	3300005591	Soil	MEDISQIGAYGILGDVDPVPQSLLSAYPEQAKTLSLLYEVSRELTSILDREQLLFR
Ga0070766_111473361	3300005921	Soil	MEDISQLGAYGILGDVDPVPQSLLTAYPEQAKTLSLLYEVSRELTSILDRE
Ga0075029_1003512212	3300006052	Watersheds	MEDIPNLGSFALLGDADPVPQSLYFSHPEQAQTLALLYDISREVTSIL
Ga0075014_1001243111	3300006174	Watersheds	MEDVSKLGSFALLGDADPVPQSLYFSHPEQAQTLALLYDISREVTSILDREELLGRVAE
Ga0066665_110465072	3300006796	Soil	MDELSKLGGFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREE
Ga0066659_118689801	3300006797	Soil	MDELSKLGAFSLLGDTDPVPESLLVSYPEQAKTLMLLYEVSRELTSILDRQELL
Ga0079221_104492203	3300006804	Agricultural Soil	MDDLSKLASYAILGDADSVPPSLLTAFPEQAKTLTLLNDVSRE
Ga0075433_115629681	3300006852	Populus Rhizosphere	MDEAAKLAHFPLMGDADPVPASLFVSHPEQANTLSLLYDVSREITSIL
Ga0099794_100697523	3300007265	Vadose Zone Soil	MDDLSKLGAFAMVGEADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREEL
Ga0099794_100912403	3300007265	Vadose Zone Soil	MDEAAKLAPFPLVGDADPVPASLFTSYPEQANTLSLLYEVSREITSILDRE
Ga0099794_106915292	3300007265	Vadose Zone Soil	MDDLSKLGAFALVGEADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREEL
Ga0099829_115298111	3300009038	Vadose Zone Soil	MDDLSKLGAFALLGDADPVPQSLFLTHPEQAKTLMLLYEVSRELTSILDREEL
Ga0099830_110378502	3300009088	Vadose Zone Soil	MADLSKIDGFALLGDADPVPQSLFLSHPEQAQTLALLYEVSREVTSI
Ga0099828_104333681	3300009089	Vadose Zone Soil	MADLSKIDAFALLGDADPVPQSLFLSHPEQAQTLALLYEVSREVTSILDREELLRRV
Ga0099828_113245171	3300009089	Vadose Zone Soil	MDDLSKLGAFALLGDADPVPQSLFVSYPEQAKTLMLLYEVSRELTSILD
Ga0099827_109315222	3300009090	Vadose Zone Soil	VIEDLSKIGSFALLGDADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREELLRRV
Ga0099827_112233112	3300009090	Vadose Zone Soil	MDELSKLGAFAMLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDR
Ga0099827_118500151	3300009090	Vadose Zone Soil	VDELSQLAALPPSGEVDAVPQSLLTAFPEQAKTLGLLYDVSRELTSILDREELLGRIAE
Ga0099792_108591681	3300009143	Vadose Zone Soil	MDNPAGKLAPFALVGDADPVPASLFVSHPEQASTLALLYEVSREITSILDREEL
Ga0126380_119960101	3300010043	Tropical Forest Soil	LAEALPTVDETSQLGSFALLGDADPVPQSLFVAYPEQAKTLTLLHDVSRELASI
Ga0126384_110626391	3300010046	Tropical Forest Soil	MDDLGKVAALPLTGEADPVPQSFLASFPEQAKTLGLLYDVSRELTSIVDREELLQRITEL
Ga0134082_100314853	3300010303	Grasslands Soil	MEDFSKTGSFALLGDADAVPQSLFLSHPDQANTLALLYDVSREVTSILDREELLRRV
Ga0074044_104783031	3300010343	Bog Forest Soil	MEDLSKLSSYAILGDVDPVPHSFLTAFPEQAKTLRLLYDVSRELASILDREQLLRRVAERIKRLV
Ga0126370_107136251	3300010358	Tropical Forest Soil	MEDSPKTTPLIVMGDADPVPASLFTAYPEQANTLALLYEVSREITSILDREE
Ga0126376_104249053	3300010359	Tropical Forest Soil	MDEESKVAPFPLIGDADPVPASLYVSFPEQANTLTLLYEVSREITSILDREELLR
Ga0126372_119207842	3300010360	Tropical Forest Soil	MKERAEGVSAVDDRTNFGSFALLGDADPVPQSLFVAYPEQAKTLALLHEVSRELTSILVREELLRRVAERIKKIV
Ga0126378_101525951	3300010361	Tropical Forest Soil	MGGGCLSLDELNKLGSFALLGDADPVPQSLFVAYPEQAKTLAILHEVSRELTSILDREEL
Ga0126381_1023321432	3300010376	Tropical Forest Soil	MDDLGKVAALPLTGEADPVPQSFLASFPEQAKTLGLLYDVSRELTSILDREELLQRITEL
Ga0134126_105277673	3300010396	Terrestrial Soil	MEDLSKLASYALLGDADPVPVSLLTAFPEQAKTLTLLYEVSRELTSI
Ga0150983_141061221	3300011120	Forest Soil	MDEAAKLAPFPLVGEADPVPASLFTSYPEQANTLSLLYDVSREITSIL
Ga0137392_100489261	3300011269	Vadose Zone Soil	MEDLSKIGSFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREEL
Ga0137393_101364563	3300011271	Vadose Zone Soil	MDETAAKLAPFALVGDADPVPASLYLSHPEQANTLALLYDVSREITSILDRQELLRQIAQ
Ga0137389_100177501	3300012096	Vadose Zone Soil	MNKLSKLGAFGLLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSIL
Ga0137388_104271261	3300012189	Vadose Zone Soil	MEDVSKFGAFALLGDADPVPQSLFASHPEQAKTLLLLYEVSRELTSILDREE
Ga0137388_109789042	3300012189	Vadose Zone Soil	MENVSKFGAFALLGDADPVPQSLYASHPDQAKTMLLLYEVSRELTYILDREELLRRVA
Ga0137364_105237361	3300012198	Vadose Zone Soil	LDEVNKLGSFALLGDADPVPQSLFVAYPEQAKTLALLHEVSRELTSILDREELL
Ga0137364_111972382	3300012198	Vadose Zone Soil	MDELSKLGGFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSIL
Ga0137364_114151341	3300012198	Vadose Zone Soil	MEDLSKIGSFAPLGDADPVPQSLFLSHPEQANTLTLLYEVSREITSILDREELLRRV
Ga0137363_102507261	3300012202	Vadose Zone Soil	MKARPDTLMEDLSKIGAFALLGDADPVPQSLFLSHPEQANTLALLYEVSREV
Ga0137399_108435432	3300012203	Vadose Zone Soil	MEDLSKIGSFALLGDADPVPQSLFLSHPHQANTLALLYEVSREVTSILDREELLRRVAER
Ga0137362_104500591	3300012205	Vadose Zone Soil	MADLSKIDAFALLGDADPVPQSLFLSHPEQAQTLALLYEVSREVTSILDREELL
Ga0137362_105970631	3300012205	Vadose Zone Soil	MDELSKLGGFALLGDADPVPQSLLLSYPEQAKTLKLLYEVSRELTSILDREE
Ga0137380_113348961	3300012206	Vadose Zone Soil	VDDFSKLGAYALVGDADPVPQSLFVAYPEQAKTLALLHEVSRELASI
Ga0137381_118026942	3300012207	Vadose Zone Soil	MDELSKLGGFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTS
Ga0137378_108892412	3300012210	Vadose Zone Soil	MEARRRTPAMEDLPQLGAFALLGDADPVPQSLFLSHPEQAGTLALLYDVSRELTSILDR
Ga0137377_116255922	3300012211	Vadose Zone Soil	MDELSKLGAFAMLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREE
Ga0137386_102079532	3300012351	Vadose Zone Soil	MNDLSKLGAFALLGDADPVPQSLFLTHPEQAKTLMLLYEVSRELTSILDREELL
Ga0137390_100245865	3300012363	Vadose Zone Soil	MDELSKLGGFALLGDADPVPQSLLISYPEQAKTLKLLYEVSRELTSILDREE
Ga0137390_111978051	3300012363	Vadose Zone Soil	MDELSKLGAFAMLGDADPVPQSLLLSYPEQAKTLKLLYEVSRELTSILD
Ga0134041_12040892	3300012405	Grasslands Soil	LDDPTKLGSFALLGDADPVPQSLFVAYPEQAKTLALLHEVSRELTAILDREELL
Ga0137358_103523331	3300012582	Vadose Zone Soil	MEDLSKLGGFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREELLRRV
Ga0137358_107687601	3300012582	Vadose Zone Soil	MDEAAKLAPFPLVGDADPVPASLFTSYPEQANTLSLLYEVSREITSI
Ga0137398_100975461	3300012683	Vadose Zone Soil	MTEDLSKIGSFALLGDADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREELL
Ga0137398_103648101	3300012683	Vadose Zone Soil	MEDLSKIGSFALLGDADPVPQSLFLSHPEQANTLTLLYEVSREITSILDREELLRR
Ga0137359_109886041	3300012923	Vadose Zone Soil	MSWLNMAFAPMDELSQLATLPPSGDADPVPQTLLAAFPEQAKTLGLLY
Ga0137359_112044171	3300012923	Vadose Zone Soil	MEDLSKIGTFALLGDADPVPQSLFLSHPDQANTLALLYEVSREVTSILDREEL
Ga0137413_110173192	3300012924	Vadose Zone Soil	MDEAAKLAPFPFVGDADPVPASLFVSYPEQANTLALLYEVSREITSILDR
Ga0137419_105883872	3300012925	Vadose Zone Soil	MDEAAKLAPFPFVGDADPVPASLFVSYPEQANTLALLYEVSREITSILDREELLR
Ga0137419_106101841	3300012925	Vadose Zone Soil	MDELSKLGAFALLGDADPVPQSLLVSYPEQAKTLMLLHEVSRELTSI
Ga0137411_10381601	3300015052	Vadose Zone Soil	MEELSKLGAFALLGDADPVPQGLYVSFPEQAKTLTLLYEVSRELTSILDRQ
Ga0137411_10567622	3300015052	Vadose Zone Soil	MEDFSKIGSFALLGDADPVPQSLFQSHPEQANTLALLYEVSREVTSILD
Ga0137411_13133315	3300015052	Vadose Zone Soil	MDEAAKLAPFPFVGDADPVPASLFVSYPEQANTLALLYEVSREITSSSIAKNYCAA*
Ga0137420_14254312	3300015054	Vadose Zone Soil	MADLSKIDAFALLGDADPVPQSLFLSHPEQARPRSLYEVSREVTSILDREELLPASPSASRKS*
Ga0137418_101270821	3300015241	Vadose Zone Soil	MADLSKIDAFALLGDADPVPQSLFLSHPEQAQTLALLYEVSREVTSILDR
Ga0182037_103527062	3300016404	Soil	MTWPGSTLSPMDELSQLASLPLQGEADPVPQSLLAAFPDQAKTLGLLY
Ga0187821_104742251	3300017936	Freshwater Sediment	MEDLSKIGSFALLGDADPVPQSLFFSHPEQAHTLALLYEVSREFTAILDREELLRR
Ga0187769_111648132	3300018086	Tropical Peatland	MADPIIAGSFSFLEEADPVPKSLFVSFPEQAKTLTLLYEVSRELASILDRQELLRR
Ga0066662_105210742	3300018468	Grasslands Soil	MADLSKIDSFALLGDADPVPQSLFLSHPEQAQTLTLLYEVSREVTSILDREELLRRV
Ga0066669_114217081	3300018482	Grasslands Soil	MDELSQLAALPPQVEADPIPQSLVAAFPDQAKTLGLLYDVSRELTSILDRKELLGRIAE
Ga0210403_102277191	3300020580	Soil	MDEAAKLAPFPLVGDADPVPASLFTAYPEQANTLSLLYEVSREITSILDREE
Ga0210403_102846341	3300020580	Soil	MEDISQLGAYGILGDVDPVPPSFLTAYPEQAKTLALLYDVS
Ga0210399_109690971	3300020581	Soil	MAEQLKPGAFPLLGDADPVPHSLLATYPEHADTLLLLYEISREFTAILDREELLRRVAQR
Ga0210401_101296531	3300020583	Soil	MDEAAKLAPFPLVGDADPVPASLFTSYPEQANTLSLLYDVSREITSILDRE
Ga0210400_106053793	3300021170	Soil	MDEAAKLAPFPLVGDADPVPPSLFASYPEQANTLSLLYEVSREITSILDREEL
Ga0210400_111855081	3300021170	Soil	MEDVSKLGSFALLGEADPVPQSLFLSHPEQAQTLALLYDISREVTSILDREEL
Ga0210393_102830243	3300021401	Soil	MEDISQLGAYGILGDVDPVPPSLLTAYPEQAKTLSLLYEVSR
Ga0210393_107820371	3300021401	Soil	MEDISQLGAYGILGDVDPVPQSLLTAYPEQAKTLSLL
Ga0210386_116464202	3300021406	Soil	MEDAAKLASYAILGDVDPVPQSLLTAFPEQAKTLTLLYDVSRELT
Ga0210394_114286751	3300021420	Soil	MDESTGLGPFALLGDADPVPQSLFLAYPEQAKTLLLLYEVSRELTSILDREE
Ga0210398_108851411	3300021477	Soil	MEDAAKLASYAILGDVDPVPQSLLTAFPEQAKTLTLLYDVSRELTSILDRE
Ga0210410_103903111	3300021479	Soil	MEDAAKLASYAILGDVDPVPQSLLTAFPEQAKTLTLLYDVSRELTS
Ga0210410_117026741	3300021479	Soil	MEDISQLGAYGILGDVDPVPPSFLTAYPEQAKTLALLYDVSRELTSILDREQLLF
Ga0242654_101800861	3300022726	Soil	KRTVMEDLSKLGGFALLGDADPVPQSLLVSYPEQAKTLRLLYEVSRELTSILDREELLRRVAESVKNCGL
Ga0247695_10008897	3300024179	Soil	MEDLSKLASYALLGDADPVPVSLLTAFPEQAKTLTLLYEVSRELTSIL
Ga0224564_10318362	3300024271	Soil	MEDFPQLGSYAILGDVDPVPQSLLSAYPEQAKTLTLLYDVS
Ga0207684_102024761	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSWPGSTLSTMDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSILDR
Ga0207684_110062622	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSILDREELL
Ga0207641_117307221	3300026088	Switchgrass Rhizosphere	MDEAAKLAPFPLMGDADPVPASLFVSHPEQANTLSLLYDVSREITSILD
Ga0209350_11297782	3300026277	Grasslands Soil	MDELSKLGGFALLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREEL
Ga0209238_12546151	3300026301	Grasslands Soil	MEDLSKIGSFALLGDADLVPQSLFLSHPEQANTLTLLYEVSREITSILD
Ga0179587_102294673	3300026557	Vadose Zone Soil	MDNPAAKLAPFALVGDADPVPASLFVSHPEQANTLALLYEVSREITSILDREELLRR
Ga0179587_108291671	3300026557	Vadose Zone Soil	MTGPNMDDQSKTAAFPLTGDADPVAAGVLGSYPEQASTLSLLYEVSREITSILDR
Ga0208241_10860681	3300027297	Forest Soil	MEDISQLGAYGILGDVDPVPPSLLTAYPEQAKTLSLLYEVSRELTSILDREQVL
Ga0209388_10319201	3300027655	Vadose Zone Soil	MEDVSKFGAFALLGDADPVPQSLFASHPEQAKTLLLLYEVSRELTSILDREELLRRV
Ga0209736_11247861	3300027660	Forest Soil	MRIISDMDEQPKPSPFPLVGDPDPVPASLLASYPEQANTLALLYEVSREITSILDREEL
Ga0209038_102559971	3300027737	Bog Forest Soil	MEDISQLGAYGILGDVDPVPPSLLTAYPEQAKTLSLLYEVSRELTSIL
Ga0209773_104590032	3300027829	Bog Forest Soil	MDDLSKLSSYAILGDVDPVPRSLLTAFPEQAKTLTLLYEVSR
Ga0209180_101642701	3300027846	Vadose Zone Soil	MMEDLSKIGSFALLGDADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREE
Ga0209275_100827181	3300027884	Soil	MEDISQLGAYGILGDVDPVPPSFLTAYPEQAKTLALLYDVSRE
Ga0209488_106490712	3300027903	Vadose Zone Soil	MGVRFRTSSMEDLPQLGAFALLGDADPVPQSLFLSHPEQAGTLALLYDVSRE
Ga0209526_105033171	3300028047	Forest Soil	MNELSKLGAFGLLGDADPVPQSLLVSYPEQAKTLKLLYEVSRELTSILDREELLR
Ga0137415_105227961	3300028536	Vadose Zone Soil	MDELSKLGAFALLGDADPVPQSLFLSHPEQANTLALLYEVSREVTSILDREELLRRV
Ga0137415_107035181	3300028536	Vadose Zone Soil	MDEATKLASLPLLGDVDSVPASLFVSYPEQANTLALLYEVSREITSI
Ga0137415_108072922	3300028536	Vadose Zone Soil	MEDLSKIASFALVGEADPIPRSLFLSHPDQANTLALLYEVSREVTSILDREEL
Ga0170834_1128689641	3300031057	Forest Soil	MDDLSKLSSYAILGDVDPVPRSLLTAFPEQAKTLTLLYDVSRELTSILDREEL
Ga0310686_1186515801	3300031708	Soil	MEDFPQLGSYAILGDVDPVPQSLLSAFPEQAKTLTLLYDVSRE
Ga0307474_108025511	3300031718	Hardwood Forest Soil	MTEDLSKIGSFALLGDTDPVPQSLFLSHPEQANTLALLYEVSREVTSILDR
Ga0307469_109353951	3300031720	Hardwood Forest Soil	MSWPGSTLSPMDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSRELTSI
Ga0307469_125176361	3300031720	Hardwood Forest Soil	MSWPGSTLSPMDELSQLAALPPQGEADPVPQSLLAAFPEQAKTLGLLYDVSREL
Ga0307475_100146091	3300031754	Hardwood Forest Soil	MDEAAKLAPFPLVGDADPVPASLFTSYPEQANTLSLLYDVSREITSIL
Ga0307475_105845702	3300031754	Hardwood Forest Soil	MDEAAKVAPFPLVGDADPVPASLFTSYPEQANTLSLLYDVSREITSIL
Ga0307475_107675291	3300031754	Hardwood Forest Soil	MDEGTKLAPFPLVGDADPVPASLFASYPEQANTLSLLYEVSREITSILDREELLR
Ga0318529_101560992	3300031792	Soil	MTWPGSTLSPMDELSQLASLPLQGEADPVPQSLLAAFPDQAKTLGLLYDVSRELTSILDREEL
Ga0306921_107421331	3300031912	Soil	MEELAKVAALPLTGEADPVPQSLLATFPEQAKTLGLLYDVSRELTSIL
Ga0310912_107253902	3300031941	Soil	MEDLYKVAALPLTGEADPVPQSLLASFPEQAKTLGLLYDVSRELTSILDREEL
Ga0318562_103219312	3300032008	Soil	MEELAKVAALPLTGEADPVPQSLLATFPEQAKTLGLLYDVSRELTSI
Ga0318563_105837601	3300032009	Soil	MEDLYKVAALPLTGEADPVPQSLLASFPEQAKTLGLLYDVSRELTSILDREELLQRIT
Ga0318506_101629102	3300032052	Soil	MDDLGKVAALPLTGEADPVPQSFLASFPEQAKTLGLLYDVSRELTSILDREELLQRITE
Ga0335081_102798601	3300032892	Soil	MDDASKLEAFTLLGDADPVPRTLFAAYPEQANTLMLLYEVSRELASILDRQELLRRVAELIK
Ga0335074_112985262	3300032895	Soil	MEDLSKLASYAILGDVDPVPRSLLSAFPEQAKTLG
Ga0318519_103387002	3300033290	Soil	MDDLGKVAALPLTGEADPVPQSFLASFPEQAKTLGLLYDVSRELTSILDREELLQRITELVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences