Metagenome / Metatranscriptome Family F055951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055951
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	75 residues
Representative Sequence	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAK
Number of Associated Samples	129
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.55 %
% of genes near scaffold ends (potentially truncated)	94.20 %
% of genes from short scaffolds (< 2000 bps)	94.93 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.478 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.464 % of family members)
Environment Ontology (ENVO)	Unclassified (19.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.60% β-sheet: 0.00% Coil/Unstructured: 53.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF07726	AAA_3	43.80
PF01882	DUF58	0.73
PF03979	Sigma70_r1_1	0.73
PF13559	DUF4129	0.73
PF02738	MoCoBD_1	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.73
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.73

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.48 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.48 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.48 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.03 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	92.03 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	89.13 %
Unclassified	root	N/A	6.52 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	20.29 %
Unclassified	root	N/A	6.52 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.17 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	20.29 %
Unclassified	root	N/A	6.52 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.17 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	20.29 %
Unclassified	root	N/A	6.52 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.72 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Mycobacterium talmoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	20.29 %
Unclassified	root	N/A	6.52 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig127354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	987	Open in IMG/M
3300001978\|JGI24747J21853_1036692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300002245\|JGIcombinedJ26739_100211921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1830	Open in IMG/M
3300003505\|JGIcombinedJ51221_10231859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300004082\|Ga0062384_100426122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300005162\|Ga0066814_10087836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300005332\|Ga0066388_103791549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300005367\|Ga0070667_101050793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300005434\|Ga0070709_11725223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300005436\|Ga0070713_101090323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
3300005538\|Ga0070731_11101949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300005568\|Ga0066703_10566164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300005569\|Ga0066705_10345026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300005576\|Ga0066708_11056804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300005602\|Ga0070762_11177963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300005718\|Ga0068866_11299271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300005764\|Ga0066903_108914705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	509	Open in IMG/M
3300005921\|Ga0070766_10253914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1116	Open in IMG/M
3300006028\|Ga0070717_10950666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300006058\|Ga0075432_10267192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300006174\|Ga0075014_100541326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300006806\|Ga0079220_10172577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300006914\|Ga0075436_100650645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300006954\|Ga0079219_10235295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1074	Open in IMG/M
3300009038\|Ga0099829_10690846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300009137\|Ga0066709_102882586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300009143\|Ga0099792_11142725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300009522\|Ga0116218_1246741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	802	Open in IMG/M
3300010152\|Ga0126318_10234381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300010159\|Ga0099796_10044873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1512	Open in IMG/M
3300010301\|Ga0134070_10397560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300010320\|Ga0134109_10259624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300010321\|Ga0134067_10127708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	891	Open in IMG/M
3300010337\|Ga0134062_10152897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300010358\|Ga0126370_12349899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300010366\|Ga0126379_12335924	Not Available	635	Open in IMG/M
3300010876\|Ga0126361_11097432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300010880\|Ga0126350_11006413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300010880\|Ga0126350_11159367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	829	Open in IMG/M
3300011107\|Ga0151490_1462380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300012176\|Ga0153952_1125417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300012206\|Ga0137380_10114224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2467	Open in IMG/M
3300012207\|Ga0137381_10879049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300012355\|Ga0137369_11143154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300012356\|Ga0137371_10419074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1038	Open in IMG/M
3300012357\|Ga0137384_11269826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300012476\|Ga0157344_1003594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300012480\|Ga0157346_1011236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300012906\|Ga0157295_10421213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300012930\|Ga0137407_10611566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1023	Open in IMG/M
3300012975\|Ga0134110_10200067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300013105\|Ga0157369_10849627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300015245\|Ga0137409_10468267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1081	Open in IMG/M
3300015373\|Ga0132257_100423581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1621	Open in IMG/M
3300015374\|Ga0132255_101752367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	943	Open in IMG/M
3300016387\|Ga0182040_11429651	Not Available	586	Open in IMG/M
3300016404\|Ga0182037_11884754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300017821\|Ga0187812_1099786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	949	Open in IMG/M
3300017926\|Ga0187807_1172916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300017942\|Ga0187808_10152672	Not Available	1018	Open in IMG/M
3300017947\|Ga0187785_10430354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300017975\|Ga0187782_11126837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300017995\|Ga0187816_10363108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300018037\|Ga0187883_10216130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	982	Open in IMG/M
3300018038\|Ga0187855_10552906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300018058\|Ga0187766_10884483	Not Available	629	Open in IMG/M
3300018060\|Ga0187765_10065147	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300018060\|Ga0187765_10409985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300018060\|Ga0187765_10409985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300018085\|Ga0187772_10825459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300019787\|Ga0182031_1349603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1715	Open in IMG/M
3300019877\|Ga0193722_1134501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300020012\|Ga0193732_1055506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300021402\|Ga0210385_11109036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300021404\|Ga0210389_10660106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	820	Open in IMG/M
3300021404\|Ga0210389_11094070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300021406\|Ga0210386_11023858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300021407\|Ga0210383_11354107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300021474\|Ga0210390_10809182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	775	Open in IMG/M
3300024249\|Ga0247676_1013272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1273	Open in IMG/M
3300024331\|Ga0247668_1010518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1928	Open in IMG/M
3300025899\|Ga0207642_10841878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300025900\|Ga0207710_10679894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300025901\|Ga0207688_10014501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4283	Open in IMG/M
3300025903\|Ga0207680_10519227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	849	Open in IMG/M
3300025916\|Ga0207663_10692880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300025921\|Ga0207652_10341728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1351	Open in IMG/M
3300025928\|Ga0207700_10644615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	944	Open in IMG/M
3300026312\|Ga0209153_1292740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300026864\|Ga0209621_1001271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1334	Open in IMG/M
3300027047\|Ga0208730_1002403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300027775\|Ga0209177_10139970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300027842\|Ga0209580_10132735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1219	Open in IMG/M
3300027867\|Ga0209167_10152814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1212	Open in IMG/M
3300027869\|Ga0209579_10258086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	937	Open in IMG/M
3300027889\|Ga0209380_10412421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300028828\|Ga0307312_10580165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300028906\|Ga0308309_10987964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300028906\|Ga0308309_11464654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300029910\|Ga0311369_11426606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300030490\|Ga0302184_10024053	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300031226\|Ga0307497_10327757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300031543\|Ga0318516_10203414	Not Available	1144	Open in IMG/M
3300031544\|Ga0318534_10432002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300031544\|Ga0318534_10694124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300031668\|Ga0318542_10134851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1217	Open in IMG/M
3300031723\|Ga0318493_10288993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	882	Open in IMG/M
3300031748\|Ga0318492_10068808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1690	Open in IMG/M
3300031770\|Ga0318521_10468189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300031777\|Ga0318543_10333308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300031782\|Ga0318552_10529561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300031799\|Ga0318565_10515531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031805\|Ga0318497_10170748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1196	Open in IMG/M
3300031805\|Ga0318497_10281696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	924	Open in IMG/M
3300031805\|Ga0318497_10376800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	793	Open in IMG/M
3300031831\|Ga0318564_10284022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300031832\|Ga0318499_10347768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300031835\|Ga0318517_10496304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300031890\|Ga0306925_11343213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300032001\|Ga0306922_10901405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	918	Open in IMG/M
3300032009\|Ga0318563_10392136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300032009\|Ga0318563_10511079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300032025\|Ga0318507_10233795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300032052\|Ga0318506_10095882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1263	Open in IMG/M
3300032054\|Ga0318570_10039507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1916	Open in IMG/M
3300032064\|Ga0318510_10512013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300032180\|Ga0307471_104327922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300032770\|Ga0335085_11271200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	778	Open in IMG/M
3300032828\|Ga0335080_11361108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300032895\|Ga0335074_11508509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300032955\|Ga0335076_11102867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300033289\|Ga0310914_11120101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300033545\|Ga0316214_1068440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300033805\|Ga0314864_0024577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1275	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.68%
Host-Associated	Host-Associated	12.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.43%
Plants	Host-Associated → Plants	11.59%
Aquatic	Environmental → Aquatic	6.52%
Unclassified	Environmental → Unclassified	0.72%
Fungi	Host-Associated → Fungi	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.52%
Freshwater	Environmental → Aquatic → Freshwater	5.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Peat	Environmental → Terrestrial → Peat	1.45%
Sediment	Environmental → Aquatic → Sediment	0.72%
Unclassified	Environmental → Unclassified → Unclassified	0.72%
Roots	Host-Associated → Plants → Roots	0.72%
Mycelium	Host-Associated → Fungi → Mycelium	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.52%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.17%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026864	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01729230	2124908016		MIPNGPTSPAAGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARQHLPRI
JGI24747J21853_10366922	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRR
JGIcombinedJ26739_1002119213	3300002245	Forest Soil	MTDSSEFSLEWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPPRVSLRARPGTRRAFEG
JGIcombinedJ51221_102318591	3300003505	Forest Soil	MSFPSGPNGTGLDAPEFGFSLRWRSSRHARRLLTLGLAALFVATVARRPEFAGIAAPALLLLAAGRSQRR
Ga0062384_1004261222	3300004082	Bog Forest Soil	MSSTITPNEPGLRAPGTELELHWRSSRHARRLLTLALAGVFIAVLTRRPEFAGLAAPALLLLAAGRGVRQPPSI
Ga0066814_100878361	3300005162	Soil	MIPNGPGSPATSTEVKLRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARTLDRQLARITVRAKP
Ga0066388_1037915492	3300005332	Tropical Forest Soil	MIPNGPASSAAGTELELRWRSSRHTRRLLTLGLTGLLIAVLARRPEFAGLAAPALVLLAAGRSRPRRPRIIVRAKPTTRRAFEDERLA
Ga0070667_1010507931	3300005367	Switchgrass Rhizosphere	MIPNGPGSPAGGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLGAGRARRQLPRI
Ga0070709_117252232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIPNGPGSSAAATELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVR
Ga0070713_1010903232	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSSQAPNEVPSRPGTALKLRWRSSRHARRLLTLALTGAFIATLARRPEFAGLAAPALLLLAAGRVQRRPPRIT
Ga0070730_105218641	3300005537	Surface Soil	MSPPVPNEVPSRPGPGPGAAGGTTLELRWRPSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLA
Ga0070731_111019491	3300005538	Surface Soil	MAFSSQPNGPVPGAAGYQYSLQWRSSRHARRLLTLGLVALLVATVARRPEFAGLAAPALLLLA
Ga0066703_105661641	3300005568	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLAGLFLAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKP
Ga0066705_103450261	3300005569	Soil	MIPNGPGSSAAATELELRWRSSRHARRLLTLGLAGLFLAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPT
Ga0066708_110568042	3300005576	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARQQLPRIIVRAKPT
Ga0070762_111779632	3300005602	Soil	MSYLTPNDPGRRAAGTAVSVRWRSSRHARRLLTLGLFGVFIATITRRPEFAGLAAPALLLLAAGRIQRRPPRIAVRGQPSTRRAF
Ga0068866_112992711	3300005718	Miscanthus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPT
Ga0066903_1089147051	3300005764	Tropical Forest Soil	MIPNGPTSPAAGTELELHWRSSRHARRLLTLGLAGLFIGVLARRPEFAGLAAPALLLLVAGRVQRRPPRITVSARPSS
Ga0070766_102539141	3300005921	Soil	MSDSLTPNGAGRDAPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGR
Ga0070717_109506662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLAPNEVGSRPGTVLELRWRSSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLAAGRVQRRPPRITVRARPSSRR
Ga0075432_102671922	3300006058	Populus Rhizosphere	MIPNGPTSPAAGSELELRWRSSRHTRRLLTLGLTGLFIAVLVRRPEFAGLAAPALVLLAAGRARQ
Ga0075014_1005413261	3300006174	Watersheds	MPESMMPNGRGFLVAGHEHELRWRSSRHARRLLTLGLFGLFIATLARRPEFAGVAAPALLLLVAGR
Ga0079220_101725771	3300006806	Agricultural Soil	MSSLAPNDAGSRPGTALELRWRSSRHARRLLTLGLAGVFIATLARRPEFAGLAAPALLLLAAGRVQRRPP
Ga0075436_1006506452	3300006914	Populus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRITV
Ga0079219_102352952	3300006954	Agricultural Soil	MSTQATNGVAGSPGTALELRWRSSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLAAGRVQRRPPRITVRARPSSRRGFE
Ga0099829_106908461	3300009038	Vadose Zone Soil	MIPNEAGSPAPGAELTLRWRSSRHARRLLTLGLFGLFVATLAGRPEFAGVAAPALLLLVAGRVQRRPPRITGTSRGCASRNSSPSRAITSCAYFP
Ga0066709_1028825861	3300009137	Grasslands Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRVFEDERLA
Ga0099792_111427251	3300009143	Vadose Zone Soil	MIPNEAGSPAPGAELTLRWRSSRHARRLLTLGLFGLFVATLAGRPEFAGVAAPALLLLVAGRVQRRPPRITVRVRPSS
Ga0116218_12467411	3300009522	Peatlands Soil	MSSMVPNDPGPRVPGTELNLAWRSSRHARRLLTLGLFGVFVATLARRPEFAGVAAPALLLLAAGRVQRRPPRITVRARASSRRG
Ga0126318_102343811	3300010152	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALLLLAAGRARTLERQLPRITARAKPTTRRAF*
Ga0099796_100448733	3300010159	Vadose Zone Soil	MIPNGPGSSAAATELELRWRSSRHARRLLTLGLAGLFFAFLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRAFEGE
Ga0134070_103975602	3300010301	Grasslands Soil	MIPNGPGSPAAGPELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRISVRA
Ga0134109_102596241	3300010320	Grasslands Soil	MIPNGPGSSAAATELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPR
Ga0134067_101277081	3300010321	Grasslands Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALVLLAAGRARQQLPRIIVRAKPTTRRV
Ga0134062_101528972	3300010337	Grasslands Soil	MIPNGPGSPATGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARQYLPRIIVRAKPTTRRAFEDERLAVDVAV
Ga0126370_123498991	3300010358	Tropical Forest Soil	MIPDRPTSPAAGPELELHWRSSRHARRLLTLGMAGLFIAVLARRPEFAGLAAPALLLLAAGRSQRRPSQVRLRARPSTRRAFE
Ga0126379_123359241	3300010366	Tropical Forest Soil	MAFPSLPNEPSRDAAGTEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRRQRRPPRITLRARLST
Ga0126361_110974321	3300010876	Boreal Forest Soil	MSSMGPNDPGLRGPGTELQLTWRSSRHARRLLTLGLFGVFIATLARRPEFAGVAAPALLLLAGGGSGRVQRRPPRITVRAQPSSRRGFE
Ga0126350_110064133	3300010880	Boreal Forest Soil	MSVPSSPNGPARDAPGQEFSLAWRSSRHARRLLTLGLAALFIATAARRPEFAGLAAPALLLLAAGRG
Ga0126350_111593671	3300010880	Boreal Forest Soil	MSDSLTPNGTGRDAPDQEFSLQWRSSRHARRLLTLGLAGLFIAIVGRRPEFAGLAAPALLLLVAGRSQQRPPR
Ga0151490_14623801	3300011107	Soil	MIPNGPGSPATSTELKLHWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRAR
Ga0153952_11254171	3300012176	Attine Ant Fungus Gardens	MDTHGQEFSLQWRSSRHARRLLTLGLAALFIATVVRRPEFAGLAAPALLLLAAGRSQQRPPRVSLRARPSTRRAFEGEL
Ga0137380_101142244	3300012206	Vadose Zone Soil	MIPNGPGSPATSTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARRQRPRIIVRAKPTTRRAFEDERLAVDVAVLTG
Ga0137381_108790491	3300012207	Vadose Zone Soil	MIPNEAGSPAPGAEFALRWRSSRHARRLLTLGLFGLLVATLAGRPEFAGLAAPALLLLVAGRVQRRPPRITVRVRP
Ga0137369_111431541	3300012355	Vadose Zone Soil	MIPNGPGSPATSTELKLRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARWQRPRIIVRAKPTTRRAFEDERLAVD
Ga0137371_104190742	3300012356	Vadose Zone Soil	MIPNGPGSPAAGTELELRWRSSRHTRRLLTLGLAGLFLAVLARRPDFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRAFEGE
Ga0137384_112698261	3300012357	Vadose Zone Soil	MIPNGPASPAAGTELELRWRSSRHARRLLTLGLAGLFLAVLARRPEFAGLAAPALLLLLAAGRARRRPPRITL
Ga0157344_10035943	3300012476	Arabidopsis Rhizosphere	MSPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPPLVLLAAGRARTFDRQLAGITVRAKPTTRRAFEDERLA
Ga0157346_10112361	3300012480	Arabidopsis Rhizosphere	MSPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVGAKPTTRRVFE
Ga0157295_104212131	3300012906	Soil	MNPNGPTSPAAGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRARPQ
Ga0137407_106115661	3300012930	Vadose Zone Soil	MIPNGPASSATGTELKLRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRAQALERQLSRIIVRAKPTTRRAFE
Ga0134110_102000671	3300012975	Grasslands Soil	MIPNGPTSPAAGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALLLLAAGRARRQLPRIIVR
Ga0157369_108496272	3300013105	Corn Rhizosphere	MSTQATNGVASSPGTALELRWRSSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLAAGRVQRRPPRITVRARPSSRRGFE
Ga0137409_104682671	3300015245	Vadose Zone Soil	MIPNGPWSPAAGTELELRWRSSRHARRLLTLGLAGLFFAFLARRPEFAGLAAPALLLLAAGRAR
Ga0132257_1004235811	3300015373	Arabidopsis Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLGAGRARRQLPRIIVRAKPTTRRA
Ga0132255_1017523671	3300015374	Arabidopsis Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALLLLVAGRAQRRPPRITVSARP
Ga0182040_114296513	3300016387	Soil	MAFPSLPNGPARDAAGTEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRS
Ga0182037_118847542	3300016404	Soil	MSFPINPNGPGRDEPGQELSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRS
Ga0187812_10997862	3300017821	Freshwater Sediment	MAFSSRPNGTGQDAAGTEFSLRWQSSRHARRLLTLGLAALFIATAAGRPEFAGLAAPALLLLAAGRSQRRPPRVSLQARPSTRRAF
Ga0187807_11729162	3300017926	Freshwater Sediment	MSSSAPNGTGQDPAGTWFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQ
Ga0187808_101526721	3300017942	Freshwater Sediment	VHVDSPGQLSVRWRSSRHARRLLTLGLAGLFLATITRRPEFAGLAAPPLLLLAAGRSKRRPPRVSVQLRPSTLR
Ga0187785_104303541	3300017947	Tropical Peatland	MIPNGPGVPPPGTERELHWRSSRHARRLLTLGLAGLLVAVLARRPEFAGLAAPPLLLLVAGRVQRRPPRITMS
Ga0187782_111268372	3300017975	Tropical Peatland	MSSSFIPNDQSRRAAGTELDLRWRSSRHARRLLTLGLAAVFIAMVARRPEFAGVAAPALLLLAAGRSQRRPARISVRVRPSSRRAF
Ga0187816_103631082	3300017995	Freshwater Sediment	MAFSSRPNGTGQDAAGTEFSLRWQSSRHARRLLTLGLAALFIATAAGRPEFAGLAAPALLLLAAGRSQRRPPRVSLQARPS
Ga0187767_100820261	3300017999	Tropical Peatland	MSGVVSSRGSTVSLRWRSSRHARRLLTLGLVALFAATVARRPEFAGLAAPALLLLAAGRTQRR
Ga0187883_102161302	3300018037	Peatland	MSLMPNGPGLDGPGHELELGWRSSRHARRLLTLGVAGVFIATLARRPEFAGVAAPALLLLAAGRVQRRPPQVTVRVR
Ga0187855_105529062	3300018038	Peatland	MSLMPNGPGLDGPGHELELGWRSSRHARRLLTLGVAGVFIATLARRPEFAGVAAPALLLLAAGRVQRRP
Ga0187766_108844832	3300018058	Tropical Peatland	VSPRGSTVSLRWRSSRHARRLLTLGLAALFVATVARRPEFAGPAAPALLLLAAGRTQRRPPQISLRARPSTRRAFEG
Ga0187765_100651471	3300018060	Tropical Peatland	MSGVVSSRGSTVSLRWRSSRHARRLLTLGLVALFAATVARRPEFAGLAAPALLLLAAGRSQRRPPRITLRARLSTRRAFEG
Ga0187765_104099852	3300018060	Tropical Peatland	MPSMEPNEPASRPAGTELALSWRSSRHARRLLTLGLFGLFLATLTRRPEFAGLAAPALLLLAAGRVQRRPPRITVRAGPTR
Ga0187765_104099853	3300018060	Tropical Peatland	MIPNGPGSPAPGTELELHWRSSRHARRLLTLGLAGMFIAVLARRPEFAGLAAPALLLLVAGRVQRRPPRITVSARPAP
Ga0187772_108254591	3300018085	Tropical Peatland	MSSSFIPNDQSRRAAGTELDLRWRSSRHARRLLTLGLAAVFIAMVARRPEFAGVAAPALLLLAAGRSQRRPARISV
Ga0182031_13496033	3300019787	Bog	ELHWRSSRHARRLLTLGVAGVFIATLARRPEFAGVAAPALLLLAAGRVQRRPLRVTVRVQPSSGGPSKASRSR
Ga0193722_11345012	3300019877	Soil	MIPNGPGSPAAGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGR
Ga0193728_11636552	3300019890	Soil	MSSPAPNEVPSRPGSATGSGSGTTLELRWRSSRHARRLLTLGLAGVFVATLARRPEFAGLAAPALLLLAVSGLSGA
Ga0193732_10555061	3300020012	Soil	MIPNGPTSSAAGTELELRWRSSRHTRRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRTRRQRPRIIVRAKPTTRRAFEEERLAVDVTADGT
Ga0210385_111090361	3300021402	Soil	MSSPAPNEVPSRPGSGTGSGGGTTLELRWRSSRHARRLLTLGLAGLFFAFLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRALEGERLAVD
Ga0210389_106601061	3300021404	Soil	MIPNGPGSSASATELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRR
Ga0210389_110940702	3300021404	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALLLLAAGRSRTLERQ
Ga0210386_110238581	3300021406	Soil	MTDSSEFSLEWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPPRVSVRARPSTRRAF
Ga0210383_113541071	3300021407	Soil	MSDSLTPNGAGHDAPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRGQQRPPRVSLQ
Ga0210390_108091821	3300021474	Soil	MSDSLTPNGAGHDAPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLAAGRGQ
Ga0247676_10132723	3300024249	Soil	MSPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARR
Ga0247668_10105181	3300024331	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVRAK
Ga0207642_108418782	3300025899	Miscanthus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRTRRQL
Ga0207710_106798941	3300025900	Switchgrass Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRVFEG
Ga0207688_100145016	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRAR
Ga0207680_105192272	3300025903	Switchgrass Rhizosphere	MIPNGPGSPAGGTELELRWRSSRHARRLLTLGLTGLFIAILTRRPEFAGLAAPALLLLGAGRARRQLPRITVQAKSTTRRAF
Ga0207663_106928801	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKPTTRRVFEGER
Ga0207652_103417281	3300025921	Corn Rhizosphere	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLAAGRARRRPPRITVRAKP
Ga0207700_106446152	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIPNGPGSSAAATELELRWRSSRHARRLLTLGLAGLFFAVLARRPEFAGLAAPALLLLAAGRARRRPPRIT
Ga0207702_107771592	3300026078	Corn Rhizosphere	MSSLAPNEVGSRPGTVLELRWRSSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLAAGRVQRR
Ga0209153_12927401	3300026312	Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAAGRARRRPPRITVRAK
Ga0209621_10012713	3300026864	Forest Soil	MIPNGPGSPAAGTELELRWRSSRHARRLLTLGLTGLFIAILARRPEFAGLAAPALLLLVAGR
Ga0208730_10024033	3300027047	Forest Soil	MDTPGKEFSLQWRSSRHARRLLTLGLAALFIATVVRRPEFAGLAAPALLLLAAGRSQQRPPRVSLRARPSTR
Ga0209177_101399701	3300027775	Agricultural Soil	MSTQATNGVAGSPGTALELRWRSSRHARRLLTLGLAGLFIATLARRPEFAGLAAPALLLLAAGRVQRRPPRITVRARPSSRRGFEDE
Ga0209580_101327351	3300027842	Surface Soil	MDDPGQEFGLRWRSSRHARRLLTLGLAALFIATLARRPEFAGLAAPALLLLAAGRSQRRPPQVRLRARPGTRRAFEGELVAIDME
Ga0209167_101528142	3300027867	Surface Soil	MSSPNLQNEPGRGEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQRRPPQV
Ga0209579_102580862	3300027869	Surface Soil	MTYLTPNEPGHPTPGSAASVRWRSSRHARRLLTLGLFGVFIATITRRPEFAGLAAPALLLLAAGRVQRRPPQIMVRGRPSTRRA
Ga0209380_104124212	3300027889	Soil	MSDSLTPNGAGRDAPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRGQQRPPRVSLRARPSTRR
Ga0307312_105801652	3300028828	Soil	MIPNGPGSPAAGTELELRWRSSRHTRRLLTLGLTGLLIAVLARRPEFAGLAAPALVLLAAGRA
Ga0308309_109879642	3300028906	Soil	MSVPFSPNGAGRDGPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRS
Ga0308309_114646542	3300028906	Soil	MPESIMPNGRGFLVAGHEHELRWRSSRHARRLLTLGLFGLFIATLARRPEFAGVAAPALLLLAAGRVQRRPPRIRVAARPSSRR
Ga0311369_114266062	3300029910	Palsa	MSYLIPNDPGRPAAGTAASVRWRSSRHARRLLTLGLFGVFIATITRRPEFAGLAAPALLLLAAGRIQRRPPRVAVQGQPSTRRAFEGELVALD
Ga0302184_100240535	3300030490	Palsa	MSYLMPNDPGRHAAGTAVSVRWRSSRHARRLLTLGLFGVFIATITRRPEFAGLAAPALLLLAAGRIQRRPPRVAVQGQPSTRRAFEGELV
Ga0307497_103277572	3300031226	Soil	MIPNGPASPAAGTELELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLAVQGSGRARWRPPLITVRVK
Ga0318516_102034141	3300031543	Soil	MAFPALPNEPARDAAGTEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGPRWR
Ga0318534_104320022	3300031544	Soil	MIPNGPRSTAVGTQLELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLVAGRVQGRPPRI
Ga0318534_106941241	3300031544	Soil	MSFSLPNGAGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPTRVSLRARPS
Ga0318542_101348512	3300031668	Soil	MSFSLPNGAGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQQE
Ga0318493_102889931	3300031723	Soil	MIPNGPGSPAAGPELELRWRSSRHARRLLTLGLAGLFVAVLARRPEFAGLAAPALLLLVAGRAQRRPPRITVSARPS
Ga0318492_100688083	3300031748	Soil	MSSMEPNERAPSPAGTELALSWRSSRHARRLLTLGLFGVFIATLARRPEFAGLAAPALLLLA
Ga0318521_104681891	3300031770	Soil	MSSMGPNERAPSPTGTELALTWRSSRHARRLLTLGLFGVFIATLARRPEFAGLAAPALLLLAAGRIQRRPPQVTVRARPSSR
Ga0318543_103333081	3300031777	Soil	MIPNGPTSPAAGTELELHWRSSRHARRLLTLGMAGLFIAVLARRPEFAGLAAPALLLLAAGRAQRRPPRVAVSARPS
Ga0318552_105295612	3300031782	Soil	MSFSLPNGAGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAA
Ga0318565_105155311	3300031799	Soil	MSFPSFLNGPGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPSRVRLRARPS
Ga0318497_101707482	3300031805	Soil	MIPNGPGVPAPGTERELHWRSSRHARRLLTLGLAGLLIAVLARRPEFAGLAAPPLLLLVAGRAGASSAPWR
Ga0318497_102816962	3300031805	Soil	MIPNGPGSPAAGPELELRWRSSRHARRLLTLGLAGLFVAVLARRPEFAGLAAPALLLLVAGRAQRRPPRITVSARPSARRVF
Ga0318497_103768002	3300031805	Soil	MSFPINPNGPGRDEPGQELSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQRRPPRITLRA
Ga0318564_102840222	3300031831	Soil	MSFPSFLNGPGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALL
Ga0318499_103477681	3300031832	Soil	MIPNGPGVPAPGTELELHWRSSRHARRLLTLGLAGLFAAVLARRPEFAGLAAPALLLLVAGRV
Ga0318517_104963042	3300031835	Soil	MIPNGPGVPAPGTERELHWRSSRHARRLLTLGLAGLLIAVLARRPEFAGLAAPPLLLLVAGRVQRRPPRITM
Ga0306925_113432132	3300031890	Soil	MSFSLPNGAGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPTRVSLRA
Ga0306922_109014051	3300032001	Soil	MSSMGPNERAPSPTGTELALTWRSSRHARRLLTLGLFGVFIATLARRPEFAGLAAPALLLLAAGRAPRRPPRI
Ga0318563_103921361	3300032009	Soil	MSFPINPNGPGRDEPGQELSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQRRPPRITLRARLSTR
Ga0318563_105110792	3300032009	Soil	MSFPSFLNGPGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQQRPSRVR
Ga0318507_102337951	3300032025	Soil	MIPNGPGVPAPGTELELHWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLVEKGWVHRRPPRITVLVKPSARRVFE
Ga0318506_100958822	3300032052	Soil	MIPNGPGVPAPGTELELHWRSSRHARRLLTLGLAGLFAAVLARRPEFAGLAAPALLLLVAGRVQRRPPRITVSARSS
Ga0318570_100395074	3300032054	Soil	MSSPFPTNGPGRDEPGQEFSLQWRSSRHARRLLTLGLAALFIATVARRPEFAGLAAPALLLLAAGRSQRRPPR
Ga0318510_105120131	3300032064	Soil	MIPNGPTSPAAGTELELHWRSSRHARRLLTLGMAGLFIAVLARRPEFAGLAAPALLLLAAGRVQRRPPRVA
Ga0307471_1043279222	3300032180	Hardwood Forest Soil	MIPNGPGSSATTELELRWRSSRHARRLLTLGLAGLFFAVVARRPEFAGLAAPALLLLAAGRARRRPPRITVRAVPTTRRACEGV
Ga0335085_112712002	3300032770	Soil	MIPNGPAAPVASTEIELRWRSSRHARRLLTLGLTGLFIAVLARRPEFAGLAAPALVLLAAGRH
Ga0335080_113611082	3300032828	Soil	MIPNGPRVPASGTELELRWRSSRHARRLLTLGLAGLFVAVLARRPEFAGLAAPALLLLVAGRVQRRPPRITVS
Ga0335074_115085092	3300032895	Soil	MTPNDAGSPAPGTELELRWRSSRHARRLLTLGLAALFIAALARRPEFAGVAAPALLLLVAGRAQ
Ga0335076_111028671	3300032955	Soil	MIPNGPRVPASGTELELRWRSSRHARRLLTLGLAGLFVAVLARRPEFAGLAAPALLLLVAGRVQRRPPRITVSARL
Ga0310914_111201012	3300033289	Soil	MIPNGPRSTAVGTQLELRWRSSRHARRLLTLGLAGLFIAVLARRPEFAGLAAPALLLLVAGRVQGRPPRISVS
Ga0316214_10684402	3300033545	Roots	MSSPSIPNVPALDVPGHELELHWRSSRHARRLLTLGLAGVLIAVLARRPEFAGLAAPALLLLAAGRG
Ga0314864_0024577_1048_1275	3300033805	Peatland	MSLSSGVSPRGSTVTLRWRSSRHARRLLTLGLVALFVATVARRPEFAGLAAPALLLLAAGRTQRRPPRISLRARPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences