Metagenome / Metatranscriptome Family F055923

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055923
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	83 residues
Representative Sequence	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR
Number of Associated Samples	106
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.23 %
% of genes near scaffold ends (potentially truncated)	21.74 %
% of genes from short scaffolds (< 2000 bps)	89.86 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.536 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04545	Sigma70_r4	4.35
PF14833	NAD_binding_11	2.17
PF00311	PEPcase	2.17
PF12833	HTH_18	2.17
PF13683	rve_3	2.17
PF09900	DUF2127	1.45
PF00589	Phage_integrase	1.45
PF00005	ABC_tran	1.45
PF03547	Mem_trans	1.45
PF03061	4HBT	0.72
PF01458	SUFBD	0.72
PF02245	Pur_DNA_glyco	0.72
PF03466	LysR_substrate	0.72
PF05973	Gp49	0.72
PF00881	Nitroreductase	0.72
PF03741	TerC	0.72
PF13673	Acetyltransf_10	0.72
PF01381	HTH_3	0.72
PF07080	DUF1348	0.72
PF02954	HTH_8	0.72
PF13333	rve_2	0.72
PF03886	ABC_trans_aux	0.72
PF05685	Uma2	0.72
PF03576	Peptidase_S58	0.72
PF13602	ADH_zinc_N_2	0.72
PF01641	SelR	0.72
PF13610	DDE_Tnp_IS240	0.72
PF02538	Hydantoinase_B	0.72
PF00108	Thiolase_N	0.72
PF04392	ABC_sub_bind	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	2.17
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.45
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	1.45
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.45
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.72
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.72
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.72
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.72
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.72
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.72
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.72
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	13.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.45 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.17 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.72 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.17 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.17 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.45 %
Nitrosospira briensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	0.72 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.17 %
Bradyrhizobium sp. WSM3983	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	1.45 %
Nitrosospira briensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	0.72 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908036\|A5_v_NODE_47089_len_1144_cov_6_500000	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300001593\|JGI12635J15846_10049308	All Organisms → cellular organisms → Bacteria → Proteobacteria	3223	Open in IMG/M
3300001593\|JGI12635J15846_10095248	All Organisms → cellular organisms → Bacteria → Proteobacteria	2146	Open in IMG/M
3300001593\|JGI12635J15846_10120966	All Organisms → cellular organisms → Bacteria → Proteobacteria	1849	Open in IMG/M
3300004463\|Ga0063356_100656315	Not Available	1432	Open in IMG/M
3300005178\|Ga0066688_10274175	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005181\|Ga0066678_10176730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1351	Open in IMG/M
3300005187\|Ga0066675_10983330	Not Available	635	Open in IMG/M
3300005347\|Ga0070668_100496426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1056	Open in IMG/M
3300005436\|Ga0070713_100001532	All Organisms → cellular organisms → Bacteria → Proteobacteria	14755	Open in IMG/M
3300005447\|Ga0066689_10598183	Not Available	696	Open in IMG/M
3300005455\|Ga0070663_101276215	Not Available	647	Open in IMG/M
3300005471\|Ga0070698_100373839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1357	Open in IMG/M
3300005552\|Ga0066701_10014510	All Organisms → cellular organisms → Bacteria	3730	Open in IMG/M
3300005559\|Ga0066700_10846918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	612	Open in IMG/M
3300005764\|Ga0066903_102953621	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300005764\|Ga0066903_103814817	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300005764\|Ga0066903_105935750	Not Available	640	Open in IMG/M
3300005994\|Ga0066789_10005955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	5373	Open in IMG/M
3300006175\|Ga0070712_100839380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	790	Open in IMG/M
3300006196\|Ga0075422_10491706	Not Available	555	Open in IMG/M
3300006797\|Ga0066659_10363583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1127	Open in IMG/M
3300006871\|Ga0075434_100636498	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300009012\|Ga0066710_102722101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300009029\|Ga0066793_10821395	Not Available	528	Open in IMG/M
3300009088\|Ga0099830_11033196	Not Available	681	Open in IMG/M
3300009089\|Ga0099828_10810740	Not Available	838	Open in IMG/M
3300009089\|Ga0099828_11318115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	639	Open in IMG/M
3300009090\|Ga0099827_11037244	Not Available	712	Open in IMG/M
3300009090\|Ga0099827_11473036	Not Available	593	Open in IMG/M
3300009091\|Ga0102851_10064656	All Organisms → cellular organisms → Bacteria → Proteobacteria	3013	Open in IMG/M
3300009162\|Ga0075423_11179418	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300009167\|Ga0113563_10387357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1486	Open in IMG/M
3300009177\|Ga0105248_10508563	Not Available	1358	Open in IMG/M
3300010154\|Ga0127503_11092281	Not Available	627	Open in IMG/M
3300010336\|Ga0134071_10169734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1067	Open in IMG/M
3300010366\|Ga0126379_10251275	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300010398\|Ga0126383_10879071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	982	Open in IMG/M
3300011269\|Ga0137392_10707214	Not Available	834	Open in IMG/M
3300011269\|Ga0137392_10942399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	710	Open in IMG/M
3300011269\|Ga0137392_11227974	Not Available	608	Open in IMG/M
3300011270\|Ga0137391_10185216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1813	Open in IMG/M
3300012096\|Ga0137389_10574882	Not Available	968	Open in IMG/M
3300012189\|Ga0137388_10164109	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300012189\|Ga0137388_10523044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1102	Open in IMG/M
3300012189\|Ga0137388_10655713	Not Available	975	Open in IMG/M
3300012202\|Ga0137363_11532349	Not Available	558	Open in IMG/M
3300012206\|Ga0137380_11092393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	680	Open in IMG/M
3300012207\|Ga0137381_10917833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	757	Open in IMG/M
3300012207\|Ga0137381_11337027	Not Available	609	Open in IMG/M
3300012209\|Ga0137379_10175298	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300012210\|Ga0137378_10113359	All Organisms → cellular organisms → Bacteria → Proteobacteria	2497	Open in IMG/M
3300012210\|Ga0137378_10991675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	754	Open in IMG/M
3300012211\|Ga0137377_11177433	Not Available	696	Open in IMG/M
3300012349\|Ga0137387_10085240	Not Available	2180	Open in IMG/M
3300012349\|Ga0137387_11309334	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012350\|Ga0137372_10203968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1580	Open in IMG/M
3300012354\|Ga0137366_10553642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	828	Open in IMG/M
3300012357\|Ga0137384_10151838	Not Available	1938	Open in IMG/M
3300012362\|Ga0137361_10477764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1145	Open in IMG/M
3300012363\|Ga0137390_10115003	All Organisms → cellular organisms → Bacteria → Proteobacteria	2663	Open in IMG/M
3300012363\|Ga0137390_10505467	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300012363\|Ga0137390_10737875	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012363\|Ga0137390_11255394	Not Available	687	Open in IMG/M
3300012363\|Ga0137390_11426561	Not Available	636	Open in IMG/M
3300012363\|Ga0137390_11544443	Not Available	603	Open in IMG/M
3300012532\|Ga0137373_10297639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1284	Open in IMG/M
3300012683\|Ga0137398_10949060	Not Available	598	Open in IMG/M
3300012944\|Ga0137410_11306229	Not Available	628	Open in IMG/M
3300014325\|Ga0163163_12625933	Not Available	561	Open in IMG/M
3300015193\|Ga0167668_1025824	Not Available	1307	Open in IMG/M
3300015193\|Ga0167668_1047624	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300016294\|Ga0182041_10112192	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300016294\|Ga0182041_10738078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	876	Open in IMG/M
3300017657\|Ga0134074_1312487	Not Available	574	Open in IMG/M
3300017966\|Ga0187776_10575957	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300019888\|Ga0193751_1064381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1521	Open in IMG/M
3300021432\|Ga0210384_11702924	Not Available	536	Open in IMG/M
3300025290\|Ga0207673_1043024	Not Available	635	Open in IMG/M
3300025901\|Ga0207688_10907399	Not Available	558	Open in IMG/M
3300025923\|Ga0207681_10771532	Not Available	802	Open in IMG/M
3300025941\|Ga0207711_11335997	Not Available	659	Open in IMG/M
3300026291\|Ga0209890_10001645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	10067	Open in IMG/M
3300026326\|Ga0209801_1061204	Not Available	1686	Open in IMG/M
3300026332\|Ga0209803_1233484	Not Available	642	Open in IMG/M
3300026358\|Ga0257166_1073118	Not Available	502	Open in IMG/M
3300026497\|Ga0257164_1007073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300026532\|Ga0209160_1318618	Not Available	530	Open in IMG/M
3300026551\|Ga0209648_10551569	Not Available	644	Open in IMG/M
3300026920\|Ga0208575_1009071	Not Available	970	Open in IMG/M
3300027565\|Ga0209219_1002548	Not Available	3590	Open in IMG/M
3300027565\|Ga0209219_1016345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300027587\|Ga0209220_1056959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1042	Open in IMG/M
3300027587\|Ga0209220_1140362	Not Available	627	Open in IMG/M
3300027591\|Ga0209733_1101188	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027645\|Ga0209117_1032132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1632	Open in IMG/M
3300027651\|Ga0209217_1056161	Not Available	1178	Open in IMG/M
3300027660\|Ga0209736_1063338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1035	Open in IMG/M
3300027674\|Ga0209118_1063798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1070	Open in IMG/M
3300027674\|Ga0209118_1087758	Not Available	887	Open in IMG/M
3300027674\|Ga0209118_1103210	Not Available	805	Open in IMG/M
3300027674\|Ga0209118_1206033	Not Available	529	Open in IMG/M
3300027678\|Ga0209011_1085768	Not Available	927	Open in IMG/M
3300027727\|Ga0209328_10034179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1564	Open in IMG/M
3300027882\|Ga0209590_10460342	Not Available	822	Open in IMG/M
3300027903\|Ga0209488_10622455	Not Available	781	Open in IMG/M
3300028379\|Ga0268266_10570806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300031668\|Ga0318542_10745421	Not Available	513	Open in IMG/M
3300031720\|Ga0307469_10700670	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300031740\|Ga0307468_101101072	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300031765\|Ga0318554_10272886	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300031768\|Ga0318509_10317039	Not Available	873	Open in IMG/M
3300031781\|Ga0318547_10720574	Not Available	620	Open in IMG/M
3300031798\|Ga0318523_10600363	Not Available	542	Open in IMG/M
3300031820\|Ga0307473_10272613	Not Available	1050	Open in IMG/M
3300031820\|Ga0307473_10467790	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031820\|Ga0307473_10687234	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031896\|Ga0318551_10261845	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300031910\|Ga0306923_11940134	Not Available	600	Open in IMG/M
3300031947\|Ga0310909_11455689	Not Available	547	Open in IMG/M
3300032001\|Ga0306922_10357737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1566	Open in IMG/M
3300032076\|Ga0306924_10724681	Not Available	1115	Open in IMG/M
3300032118\|Ga0315277_11365624	Not Available	616	Open in IMG/M
3300032180\|Ga0307471_101448776	Not Available	846	Open in IMG/M
3300032180\|Ga0307471_103258641	Not Available	575	Open in IMG/M
3300032180\|Ga0307471_104338994	Not Available	501	Open in IMG/M
3300032205\|Ga0307472_100055017	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300032205\|Ga0307472_101642881	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300032205\|Ga0307472_101656250	Not Available	631	Open in IMG/M
3300032516\|Ga0315273_10755902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1271	Open in IMG/M
3300032516\|Ga0315273_11334943	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300032828\|Ga0335080_11420189	Not Available	689	Open in IMG/M
3300033289\|Ga0310914_10823409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	827	Open in IMG/M
3300033413\|Ga0316603_10883453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	842	Open in IMG/M
3300033414\|Ga0316619_11340458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	637	Open in IMG/M
3300033419\|Ga0316601_102418736	Not Available	528	Open in IMG/M
3300033433\|Ga0326726_10380597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1336	Open in IMG/M
3300033482\|Ga0316627_102987397	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.58%
Host-Associated	Host-Associated	9.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.23%
Plants	Host-Associated → Plants	9.42%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.52%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Peat	Environmental → Terrestrial → Peat	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.59%
Loam	Environmental → Terrestrial → Soil → Loam	17.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.90%
Lake	Environmental → Aquatic → Freshwater → Lake	2.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.62%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.17%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_v_00113140	2124908036	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASTKRRSR
JGI12635J15846_100493082	3300001593	Forest Soil	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGKTIAEEIGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAPSKRRRSR*
JGI12635J15846_100952482	3300001593	Forest Soil	MARKKAPTNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSAVAKKAKAVAASKTRRSR*
JGI12635J15846_101209662	3300001593	Forest Soil	MARKKAPNNQGAVWTATDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSAPPAVRRSAVGKKVKTVAASKTRRSR*
Ga0063356_1006563152	3300004463	Arabidopsis Thaliana Rhizosphere	MVRKKVRSKQGAVWTTKDTAAIRRLVKAGAKGQTIAEEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS*
Ga0066688_102741751	3300005178	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0066678_101767302	3300005181	Soil	MARKKAPTNHGAMWTTKDLATIRRLVKTGATGKTIAEEIGRSVVALYQKASIEGISLSAHQAVRRSSAAKKAKGVAASKTRRSRLLSDGSVGR*
Ga0066675_109833301	3300005187	Soil	MARNKAPSNRGAVWTTKDLAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0070668_1004964261	3300005347	Switchgrass Rhizosphere	MVRKKVRSKQGAVWTTKDTAAIRCLVKAGAKGQTIAEEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS*
Ga0070713_1000015325	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MARKKAPSNQGAVWTRKDFAAIRRLVKTGATGKTIAEEIGRSVVALYQRASIEGISLSAHPMVRRSAVAKKTKGVAALKGRRSR*
Ga0066689_105981831	3300005447	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKTRRSR*
Ga0070663_1012762152	3300005455	Corn Rhizosphere	MVRKKVRSRQGAVWTTKDTAAIRRLVQAGAKGQTIADEIGRSLAALYQKASIEGISLARTSTVRQSAAAKRA
Ga0070698_1003738393	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARKKAPSNQGAVWTTKDFAAIRRLLKTGATGKTIAKQIGRSVVALYQKTSLEGISLSARPTVRRSAVAKKVKAVAPSKRRRSR*
Ga0066701_100145103	3300005552	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIERISLSARPTVRRSAVAKNAKAVAASKTRRSR*
Ga0066700_108469181	3300005559	Soil	MARKNAPSNQGAIWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSTRQAVQRSAVAKKAKAVAASKRRRSR*
Ga0066903_1029536212	3300005764	Tropical Forest Soil	MARKKTPSNQGAVWTAKDFAVIKRMVKSGAKGKEIAQAIGRSVVALYQKASVEGISLSAPRSAAKKSATKSRKPTSRR*
Ga0066903_1038148171	3300005764	Tropical Forest Soil	MARKRAPSNQGAVWTTKDFASIRRLVKAGATGKAIAKEIGRSVVALYQKASIEGISLSARPTVRRSTVAKKARAASKRRRSR*
Ga0066903_1059357502	3300005764	Tropical Forest Soil	MARKKTGNNHGAAWTTKDFAAIRRLVKVGASGKTIARELGRSVVAVYQKASVEGISLSARPKVQRSAMAKKAKAAASKTRRTG*
Ga0066789_100059553	3300005994	Soil	MAHKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKVVAASKMRRSRAR*
Ga0070712_1008393801	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MARKKAPSNQGAVWTRKDFAAIRRLVKTGATGKTIAEEIGRSVVALYQRASIEGISPSAHPMVRRSAVAKKTKGVAALKGRRSR*
Ga0075422_104917062	3300006196	Populus Rhizosphere	KVPSNQGATWTGKDMACIRRLVKAGATGKTIAAEIGRSIFALYQKASMEGISLSKARTVRRSAARRKALVISKSAYFPEIARVR*
Ga0066659_103635832	3300006797	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKNAKAVAASKTRRSR*
Ga0075434_1006364982	3300006871	Populus Rhizosphere	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGRTIAAKIGRSVVALYQKASIEGISLSARPAVRRSAVAKRAKGVAASKRRRSR*
Ga0066710_1027221011	3300009012	Grasslands Soil	ETSRHLRGEMPMARKKAPSNQGAVWTMKDLAVIRRLVKTGATGKTIAKKIGRSVVALYQKASIERISLSARPTVRRSAVAKKAKAVAASKRRRSR
Ga0066793_108213951	3300009029	Prmafrost Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSAVDKKAKAGAASKMRRARAR*
Ga0099830_110331961	3300009088	Vadose Zone Soil	PSNQGAVWTTKDFAAIRRLVKMSATGKTIAKKIGRSVVALYQKASLEGISLSAHPTVRRSAVAKKAKAVAASTRRRSR*
Ga0099828_108107402	3300009089	Vadose Zone Soil	MARKKAPSNYGAVWTRKDFAAIRRLVKAGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASTRRRSR*
Ga0099828_113181151	3300009089	Vadose Zone Soil	MVRKKAPSNQGAVWTTKDFAAIRRLVKTGAKGKTIAKKIGRSVVALYQKASIAGISLSARPTVRQSTVAKKAKAVAASKRRRSR*
Ga0099827_110372441	3300009090	Vadose Zone Soil	MARKKAPSNQGVVWTTKDFAAVRRLVKTGAMGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0099827_114730361	3300009090	Vadose Zone Soil	MARNEAPSNQGAVWTTKDFAAIRRLVKTGAKGKTIAKKIGRSVAALYQKASVEGISLSARPTFRRSAVAKKAKVVAPAKRRRSR*
Ga0102851_100646562	3300009091	Freshwater Wetlands	MARKKTPSNQGAAWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLQARPAVRRSAIGKKANPVAALKMRRSR*
Ga0075423_111794181	3300009162	Populus Rhizosphere	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGRTIAAKIGRSVVALYQKASIEGISLSARPAVRRLAVAKRAKGVAASKRRRSR*
Ga0113563_103873571	3300009167	Freshwater Wetlands	MARKKTPSNQGAAWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLQARPAVRRSAIGKKANPVAALKMRRS
Ga0105248_105085632	3300009177	Switchgrass Rhizosphere	MVRNKVRSKQGAVWTTKDTAAIRRLVKAGAKGQTIAEEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS*
Ga0127503_110922811	3300010154	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKRIGRSVFALYQKASIAGISLSPRPAVRGSAVAKEATAVAASKRRRSR*
Ga0134071_101697342	3300010336	Grasslands Soil	MARKKAPSNHGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKNSKAVAASKTRRSR*
Ga0126379_102512752	3300010366	Tropical Forest Soil	MARKRAPSNQGAVWTTKDIASIRRLVKAGATGKAIAKEIGRSVVALYQKASIEGISLSARPTVRRSTVAKKARAASKRRRSR*
Ga0126383_108790712	3300010398	Tropical Forest Soil	MARKRAPSNQGAVWTTKDFASIRRLVKAGATGKTIAKKIGRSVVALYQKASSEGISLSARPMVRRSTVAKKAKAIAASKRRRSR*
Ga0137392_107072142	3300011269	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVGKKAKAVAASKRRRSR*
Ga0137392_109423992	3300011269	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGAPGKTIAKKIGRSVVALYQKASIEGISLSARRTVRRSTVAKKAKAVAAAKRRRSR*
Ga0137392_112279741	3300011269	Vadose Zone Soil	YGAVWTRKDFAAIRRLVRTGATGKTIAEAIGRSVVAVYQKENIEGISLSRPAVRRSAAAKKAKAVAASKTRRSRQTSDGSLAGS*
Ga0137391_101852161	3300011270	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGAPGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASTRRRSR*
Ga0137389_105748821	3300012096	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTARRSAVAKKAKALAASTRRRSR*
Ga0137388_101641094	3300012189	Vadose Zone Soil	MARKKAPSNHGAVWTTKDFAAIRRLVKTGATGKTIAREIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAIAASKTRRSR*
Ga0137388_105230442	3300012189	Vadose Zone Soil	MARKKAPSNYGAVWTRKDFAAIRRLVRTGATGKTIAEAIGRSVVALYQKTSIEGISLSRPAVRRSAAAKKAKAVAASKTRRSR*
Ga0137388_106557132	3300012189	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVRTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASTRRRSR*
Ga0137363_115323491	3300012202	Vadose Zone Soil	MARKKAPSNHGAVWTTKDLAAIRRLAKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSPVAKKAKAVAASKRRRSR*
Ga0137380_110923931	3300012206	Vadose Zone Soil	WTTKDFAATRHLVKTGVTGKTIAEEIGRSVVVLYQTASIEGVSLSARPAVRISAATKKAEAVAAAKTRRSR*
Ga0137381_109178331	3300012207	Vadose Zone Soil	PMARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0137381_113370272	3300012207	Vadose Zone Soil	VGRGDALKYPNEGESPMARKKAPTNHGAMWTTKDLATIRRLVKTGATGKTIAEEIGRSVVALYQKASIEGISLSAHQAVRRSSAAKKAKGVAASKTRRSRLLSDGSVGR*
Ga0137379_101752982	3300012209	Vadose Zone Soil	MARKKAPSNQGVVWTTKDFAATRHLVKTGVTGKTIAEEIGRSVVVLYQTASIEGVSLSARPAVRISAATKKAEAVAAAKTRRSR*
Ga0137378_101133592	3300012210	Vadose Zone Soil	VWTTKDFAAIRRLVKMGATGKTIAKKIGRSVVALYQKASIEGISLSGRPTVRRSTVAKTAKAGAASKRRRSH*
Ga0137378_109916752	3300012210	Vadose Zone Soil	MTRKKAPSNQGAVWTTKDFAAIRRLVKMGATGKTIAKKIGRSVAALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0137377_111774331	3300012211	Vadose Zone Soil	MAREKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0137387_100852403	3300012349	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAPSKRRRSR*
Ga0137387_113093342	3300012349	Vadose Zone Soil	RKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAEEIRRSVPALYQKASLEGISLSTRSTVRRSAVAKKAKAVAASKRRRSR*
Ga0137372_102039682	3300012350	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSTVAKKAKAVVASKRRRSR*
Ga0137366_105536422	3300012354	Vadose Zone Soil	MARKKARSNQGALWTAKDFAVIRRLVKAGATGKTIAKKIGRSVVALYQKASIEGISLSGRPTVRHSAVAKKAKAVAASKRRRSR*
Ga0137384_101518382	3300012357	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKMGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSTVAKKAKAVVASKRRRSR*
Ga0137361_104777641	3300012362	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSG*
Ga0137390_101150032	3300012363	Vadose Zone Soil	MARKNAPSNQGVVWTTKDFAAIRRLVKTGATGKTIAREIGRSVVALYQKASIEGISLSAPPAVRRSALAKKAKAVAASKTRRSR*
Ga0137390_105054672	3300012363	Vadose Zone Soil	MARKKAPSNHGAVWTTKDFAAIRGLVRTGTTGKTIAKKIGRSVVALYQKASIEGISLSAPTTVRRSAAAK
Ga0137390_107378752	3300012363	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSTVAKKAKAVAASTRRRSR*
Ga0137390_112553941	3300012363	Vadose Zone Soil	MTRKKAPSNQGPVWTTKDFAAIRRLVKTGATGKTIAREIGLSVVAVYQKTNTEGISLAARPTVRRSAVAKKAKSIAASKTHRSR*
Ga0137390_114265612	3300012363	Vadose Zone Soil	MARKKAPSNQGTVWTTKDFAAIRRLVKTGATGKTIAKQIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAIAASKTRRSR*
Ga0137390_115444431	3300012363	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVTKRAKAVAASTRRRSR*
Ga0137373_102976392	3300012532	Vadose Zone Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKRIGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAASKRRRSR*
Ga0137398_109490602	3300012683	Vadose Zone Soil	MARNKAPSNHGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSAVAKKAKAVAASKRRRSR*
Ga0137410_113062291	3300012944	Vadose Zone Soil	MARKKAPSNQCAGWTTKDFAAIRRLVKTGATGKTIAKKIGHSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR*
Ga0163163_126259331	3300014325	Switchgrass Rhizosphere	MIRNKVRSRQGAVWTTKDTAAIRRLVKAGAAGQTIADEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS*
Ga0167668_10258242	3300015193	Glacier Forefield Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASTRRRSR*
Ga0167668_10476241	3300015193	Glacier Forefield Soil	MAHKKAPSNHGVVWTTKDFAAIRRLVNTGATGKTIAEAIGRSVVALYQKASLEGISLSARPAVRRSTSAKKAKSVAASKMRRSG*
Ga0182041_101121921	3300016294	Soil	MARKKTPGNQGAAWTTKDFAAIRRLVKKGATGKTIAEKIGRSVVALYQKASVEGISLSARPAVRRSAVAKKANALAGSKRRRSR
Ga0182041_107380781	3300016294	Soil	MARKRAPGNHGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIEGISLSARPTVRRSTVAKKPRAASKRRRSR
Ga0134074_13124871	3300017657	Grasslands Soil	MARKKAPSNQGALWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIERISLSARPTVRRSAVAKKAKAVAASKRRRSR
Ga0187776_105759571	3300017966	Tropical Peatland	MARKKTPGNQGAAWTTKDFAAIRRLVKKGATGKTIAEKIGRSVVALYQKASVEGISLSARPAARRSAAAKKANAIAESKRRRSR
Ga0193751_10643812	3300019888	Soil	MARTKAPSNQGAVWTAKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKGKAVAASTRRRSR
Ga0210384_117029241	3300021432	Soil	MTRKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEDISLSAPPTVRRSAVAKKAKAVAASKRRRSR
Ga0207673_10430242	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MARKKVPSNQGATWTGKDMACIRRLVKAGATGKTIAAEIGRSIFALYQKASMEGISLSKARTVRRSAARRKALVISKSAYFPEIARVR
Ga0207688_109073991	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ACIRRLVKAGATGKTIAAEIGRSIFALYQKASMEGISLSKARTVRRSAARRKALVISKSAYFPEIARVR
Ga0207681_107715322	3300025923	Switchgrass Rhizosphere	MVRKKVRSKQGAVWTTKDTAAIRRLVKAGAKGQTIAEEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS
Ga0207711_113359971	3300025941	Switchgrass Rhizosphere	TKDTAAIRRLVQAGAKGQTIADEIGRSLAALYQKASIEGISLARTATVRRSVAVKKAKAFTASKKRRRSS
Ga0209890_1000164512	3300026291	Soil	MAHKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKARIEGISLSARPTVRRSAVAKKAKVVAASKMRRSRAR
Ga0209801_10612041	3300026326	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAV
Ga0209803_12334841	3300026332	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKTRRSR
Ga0257166_10731181	3300026358	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSTKKAKAVAASKRRRSR
Ga0257164_10070732	3300026497	Soil	MSRKKAPSNQGAVWTTKDFAAIRRLVKTGAMGKAIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR
Ga0209160_13186181	3300026532	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIERISLSARPTVRRSAVAKNAKAVAASKTRRSR
Ga0209648_105515691	3300026551	Grasslands Soil	MARKKAPSNQGAVWTTKDFAVIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAASKRRRSR
Ga0208575_10090712	3300026920	Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGQTIAKKIGRSVVALYQKASIEGISLSVRPTVRRSAVVKKAKAVAASTRRRSR
Ga0209219_10025482	3300027565	Forest Soil	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGKTIAEEIGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAPSKRRRSR
Ga0209219_10163453	3300027565	Forest Soil	NQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRRSAVAKKAKAVAASKTRRSR
Ga0209220_10569591	3300027587	Forest Soil	MARKKAPSNQGAVWTTKDFVAIRRLVKTGATGKTIAKKIGRSVDALYQKASLEGISLSARPTVRRSTVAKKAKAVAASKMRRSR
Ga0209220_11403621	3300027587	Forest Soil	ATRRNVSTLTGRSMARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPAVRKSAAAKKAKAVAASKRRRSR
Ga0209733_11011882	3300027591	Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSSRPTVRRSAVAKKAKAVAASKTRRSR
Ga0209117_10321322	3300027645	Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR
Ga0209217_10561612	3300027651	Forest Soil	MARKKAPTNQDAAWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAVAASKRRRSR
Ga0209736_10633382	3300027660	Forest Soil	MARKKAPTNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASLQGISLSARLTVRRSAVAKKAKAVAASTKRRSR
Ga0209118_10637981	3300027674	Forest Soil	ERRHVEASRHLRGERSTARKKTPAKHGAVWTTKDFAAIRRLVTTGATGKTIAEKIGRSVVALYQKASIEGISLSARPAVRRSAMGNKAKAVAETKRRRSR
Ga0209118_10877581	3300027674	Forest Soil	RKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKAIAASTRRRSR
Ga0209118_11032101	3300027674	Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKRIGRSVVALYQKASIEGISLSGRPTVRRSAVAKKAKAVAASTRRRSR
Ga0209118_12060331	3300027674	Forest Soil	PDIYEERGMARKKAPSNQGAVWTTKDFAAIRRLVKTGVTGKTIAKEIGRSVVALYQKASIEGISLSSRPTVRRSAVANKAKAVAASKTRRAR
Ga0209011_10857681	3300027678	Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKALAASKTRRSR
Ga0209328_100341792	3300027727	Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKEIGRSVVALYQKASLEGISLSGRRAVRRSAVAKKVKAVGH
Ga0209590_104603421	3300027882	Vadose Zone Soil	MARKKAPSNQGVVWTTKDFAAVRRLVKTGAMGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSAVAKKAKVVAPAKRRRSR
Ga0209488_106224551	3300027903	Vadose Zone Soil	MARNKAPSNHGAVWTTKDLAAVRRLVKTGATGKMIAKKIGRSVVALYQKASIEGISLSARPAVRRSAVAKKAKAVAASKRRRSR
Ga0268266_105708061	3300028379	Switchgrass Rhizosphere	MARKKTPSNQGAVWTAKDFATIKRLVKSGEKGKAIAEAIGRSVVALYQKASVEGISLSARPAARKKAAPKKRKVAKA
Ga0318542_107454211	3300031668	Soil	MARKRAPSNQGAVWTTKDFAAIRRLVKAGVTGKTIAKKIGRSVGALYHKASIEGISLSARPTVRRSTVAKKPRAASKRRRSR
Ga0307469_107006702	3300031720	Hardwood Forest Soil	MARKKTPSNQGAVWTTKDLAAIRRLVKTGATGKTIAEKIGRSVVALYQKASVEGISLSAPLTVRRSAVAKK
Ga0307468_1011010722	3300031740	Hardwood Forest Soil	MARKKTPSNQGAAWTTKDFAAIRRLVKTGATGKTIAEKIGRSVVALYQKASVEGISLSAPPAVRRLAVAKKANAVAASKRRRFR
Ga0318554_102728862	3300031765	Soil	MARKKTPGNQGAAWTTKDFAAIRRLVKKGATGKTIAEKIGRSVVALYQKASVEGISLSARPAARRSAAAKK
Ga0318509_103170391	3300031768	Soil	MARKRAPSNQGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIEGISLSARPTVRRSTVAKK
Ga0318547_107205741	3300031781	Soil	ARNNHGAVWTRNDLAAIRRLVKMGATGKTIAAELGRSVVALYQKASIEGIPLSARPTVRRSAVVKKRKAVAAAKKRRFR
Ga0318523_106003631	3300031798	Soil	MARKKTPGNQGAAWTTRDFAAIRRLVKKGATGKTIAEKIGRSVVALYQKASVEGISLSARPAARRSAAAKKANAIAESKRRRSR
Ga0307473_102726132	3300031820	Hardwood Forest Soil	MARKKTPSNQGAVWTTKDFTAIRRLVKTGATGRTIAAKIGRSVVALYQKASIEGISLSARPAVRRSAVAKRAKGVAASKRRRSR
Ga0307473_104677902	3300031820	Hardwood Forest Soil	MARKKTPSNQGAAWTTKDFAAIRRLVKTGATGKTIAEKIGRSVVALYQKASVEGISLSAPPAVRRSAVAKKANAVAASKRRRSR
Ga0307473_106872341	3300031820	Hardwood Forest Soil	MARKKTGNNHGAAWTTKDFAAIRRLVKAGASGKAIAWELGRSVVAVYQKASVEGISLSGRPKVQRSAMAKKAKAAASKTRRTG
Ga0318551_102618452	3300031896	Soil	MARKKTPGNQGAAWTTKDFAAIRRLVKKGATGKTIAEKIGRSVVALYQKASVEGISLSARPAARRSAAAKKAN
Ga0306923_119401341	3300031910	Soil	MARKRAPSNQGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIESISLSARPTVRRSTVAKKPRAASKRRRSR
Ga0310909_114556891	3300031947	Soil	MARKRAPSNQGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIESISLSARPTVRRSTVAKKARAASKRRRSR
Ga0306922_103577372	3300032001	Soil	MARTRAPSNQGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIESISLSARPTVRRSTVAKKPRAASKRRRSR
Ga0306924_107246812	3300032076	Soil	MARKRAPSNQGAVWTTKDFAAIRRLVKAGATGKTIAKKIGRSVGALYHKASIESISLSARPTVRRSTVAKKPRAASKR
Ga0315277_113656242	3300032118	Sediment	MARKKAPGNHGAVWTTKDFATIRRLIRTGATGKSIAKVLGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAASKRRRSR
Ga0307471_1014487761	3300032180	Hardwood Forest Soil	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGRTIAAKIGRSVVALYQKASIEGISLSARPAVRRSTVAKRAKGVAASKRRRSR
Ga0307471_1032586411	3300032180	Hardwood Forest Soil	MARKKTGNNHGAAWTTKDFAAIRRLVKAGASGKAIAWELGRSVVAVYQKASVEGISLSARPKVQRSAMAKKAKAAASKTRRTG
Ga0307471_1043389941	3300032180	Hardwood Forest Soil	MARKKTPSNQGAVWTTKDLAAIRRLVKTGVTGKTIAEKIGRSVVALYQKASVEGISLQARPAVRRSAVGKKANAVAASKRRRSR
Ga0307472_1000550175	3300032205	Hardwood Forest Soil	MARKRTPSNQGAIWTTKDFAAIRRLVKTGATGKTIAEKIGRSVVALYQKASVEGISLQARPAVRRSAVGKKANIVAASKRRRSR
Ga0307472_1016428812	3300032205	Hardwood Forest Soil	MARKKTPSNQGAAWTTKDFAAIRRLVKTGAKGKTIAEKIGRSVVALYQKASVEGISLSAPPAVRRSAVAKKANAVTASKRRRSR
Ga0307472_1016562502	3300032205	Hardwood Forest Soil	MARKKAPSNQGAVWTTKDFAAIRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSPVAKKGKAVAASKRRGSR
Ga0315273_107559022	3300032516	Sediment	MARKKAPSKHGAVWTTKDFAAIRRLVKTGATGKTIAKVLGRSVVALYQKASIEGISLSPRPAVRKSAVAKKARAVAASKTRRSR
Ga0315273_113349432	3300032516	Sediment	MARKKAPGNHGAVWTTKDFATIRRLIRTGATGKSIAKVLGRSVVALYQKASIEGISLSARPMVRRSAVAKKAKAVAASK
Ga0335080_114201891	3300032828	Soil	MARKKTPSNQGAVWTTKDFAAIRRLVKTGATGKMIAEKIGRSVVALYQKASVEGISLSAPSAVRRSAVAKKANAVARTKRRRSR
Ga0310914_108234091	3300033289	Soil	MARKKTPSNQGAVWTTRDFAAIRRLVKTGAAGKTIAEKIGRSVVALYQKASIEGISLSARPTVRRSTVAKKPRAASKRRRSR
Ga0316603_108834531	3300033413	Soil	MARKKTPSNQGAAWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLQARPAVRRSAIGKKANPVAA
Ga0316619_113404581	3300033414	Soil	MARKKTPSNQGATWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLQARPAVRRSAIGKKANPA
Ga0316601_1024187361	3300033419	Soil	MARKKTPSNQGAAWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLRARPAVRRSAIGKKANPVAALKMRRSR
Ga0326726_103805971	3300033433	Peat Soil	MARKKAPSNQGAVWTTKDFAAVRRLVKTGATGKTIAKKIGRSVVALYQKASIEGISLSARPTVRRSTVAKKAKAVAASKRRRSR
Ga0316627_1029873971	3300033482	Soil	MARKKTPSNQGAAWTSKDFAAIRRLVKTGATGKTIAAKIGRSVVALYQKASVEGISLQARPAVRRSAIGKKANPVAALKMRRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055923

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences