Metagenome / Metatranscriptome Family F055916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	59 residues
Representative Sequence	MPSVPITLPLLRLGRLELGPGLRAFQPGPAASDLVVTAAVEVPESVSEPQYAWDVAWADA
Number of Associated Samples	120
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.56 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	87.68 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.043 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.058 % of family members)
Environment Ontology (ENVO)	Unclassified (34.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.55% β-sheet: 0.00% Coil/Unstructured: 95.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00730	HhH-GPD	11.59
PF07883	Cupin_2	7.97
PF03069	FmdA_AmdA	3.62
PF14552	Tautomerase_2	2.17
PF00126	HTH_1	2.17
PF13672	PP2C_2	1.45
PF00440	TetR_N	1.45
PF13302	Acetyltransf_3	1.45
PF02826	2-Hacid_dh_C	0.72
PF03466	LysR_substrate	0.72
PF05175	MTS	0.72
PF01590	GAF	0.72
PF13551	HTH_29	0.72
PF11271	PorA	0.72
PF14716	HHH_8	0.72
PF13560	HTH_31	0.72
PF03706	LPG_synthase_TM	0.72
PF13649	Methyltransf_25	0.72
PF01872	RibD_C	0.72
PF00881	Nitroreductase	0.72
PF04116	FA_hydroxylase	0.72
PF00441	Acyl-CoA_dh_1	0.72
PF01544	CorA	0.72
PF03988	DUF347	0.72
PF08669	GCV_T_C	0.72
PF06912	DUF1275	0.72
PF07992	Pyr_redox_2	0.72
PF13180	PDZ_2	0.72
PF13545	HTH_Crp_2	0.72
PF01593	Amino_oxidase	0.72
PF04542	Sigma70_r2	0.72
PF00903	Glyoxalase	0.72
PF00365	PFK	0.72
PF01523	PmbA_TldD	0.72
PF08281	Sigma70_r4_2	0.72
PF12802	MarR_2	0.72
PF04993	TfoX_N	0.72
PF00196	GerE	0.72
PF00582	Usp	0.72
PF13191	AAA_16	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0177	Endonuclease III	Replication, recombination and repair [L]	11.59
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	11.59
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	11.59
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	11.59
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	11.59
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	3.62
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.72
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.72
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.72
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.72
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.72
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.72
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.72
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.04 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.04 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.04 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.35 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.93 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	17.39 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	15.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.72 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	15.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	1.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.72 %
Stackebrandtia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia	0.72 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	15.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Actinoallomurus spadix	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	1.45 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.72 %
Stackebrandtia nassauensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia → Stackebrandtia nassauensis	0.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	15.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Actinoallomurus spadix	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	1.45 %
Stackebrandtia nassauensis DSM 44728	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia → Stackebrandtia nassauensis → Stackebrandtia nassauensis DSM 44728	0.72 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101211139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300003218\|JGI26339J46600_10050484	Not Available	1114	Open in IMG/M
3300003505\|JGIcombinedJ51221_10377471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005171\|Ga0066677_10237272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300005437\|Ga0070710_10276793	Not Available	1087	Open in IMG/M
3300005440\|Ga0070705_100074153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2068	Open in IMG/M
3300005467\|Ga0070706_100137144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2283	Open in IMG/M
3300005471\|Ga0070698_100736640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	928	Open in IMG/M
3300005536\|Ga0070697_101126562	Not Available	699	Open in IMG/M
3300005536\|Ga0070697_101829899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	543	Open in IMG/M
3300005591\|Ga0070761_10758165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300005615\|Ga0070702_100700528	Not Available	772	Open in IMG/M
3300006175\|Ga0070712_101238620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300006578\|Ga0074059_11691119	Not Available	547	Open in IMG/M
3300006579\|Ga0074054_11868179	Not Available	513	Open in IMG/M
3300006605\|Ga0074057_12318647	Not Available	671	Open in IMG/M
3300006755\|Ga0079222_11433455	Not Available	642	Open in IMG/M
3300006854\|Ga0075425_100089450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3489	Open in IMG/M
3300009089\|Ga0099828_11591389	Not Available	575	Open in IMG/M
3300009143\|Ga0099792_11062283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300009521\|Ga0116222_1170422	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300009522\|Ga0116218_1222894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	849	Open in IMG/M
3300010048\|Ga0126373_13237297	Not Available	507	Open in IMG/M
3300010358\|Ga0126370_10397146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1132	Open in IMG/M
3300010359\|Ga0126376_10018423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4513	Open in IMG/M
3300010361\|Ga0126378_12204242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300010366\|Ga0126379_10326906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1552	Open in IMG/M
3300010366\|Ga0126379_11340306	Not Available	822	Open in IMG/M
3300010379\|Ga0136449_102876588	Not Available	677	Open in IMG/M
3300010379\|Ga0136449_103185637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	634	Open in IMG/M
3300012198\|Ga0137364_10410714	Not Available	1014	Open in IMG/M
3300012202\|Ga0137363_11210904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	642	Open in IMG/M
3300012209\|Ga0137379_11166348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	677	Open in IMG/M
3300012363\|Ga0137390_10831097	Not Available	881	Open in IMG/M
3300012971\|Ga0126369_13651774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	504	Open in IMG/M
3300016294\|Ga0182041_10255422	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300016319\|Ga0182033_11684724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	574	Open in IMG/M
3300016341\|Ga0182035_10547625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	994	Open in IMG/M
3300016371\|Ga0182034_10451146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300016387\|Ga0182040_10764065	Not Available	794	Open in IMG/M
3300016422\|Ga0182039_11379509	Not Available	640	Open in IMG/M
3300017823\|Ga0187818_10503714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	543	Open in IMG/M
3300017924\|Ga0187820_1099282	Not Available	836	Open in IMG/M
3300017926\|Ga0187807_1020067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	2062	Open in IMG/M
3300017932\|Ga0187814_10068226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300017933\|Ga0187801_10321824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300017937\|Ga0187809_10081220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Stackebrandtia → Stackebrandtia nassauensis → Stackebrandtia nassauensis DSM 44728	1070	Open in IMG/M
3300017937\|Ga0187809_10207852	All Organisms → cellular organisms → Bacteria → Terrabacteria group	696	Open in IMG/M
3300017937\|Ga0187809_10330803	Not Available	567	Open in IMG/M
3300017942\|Ga0187808_10037402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2023	Open in IMG/M
3300017946\|Ga0187879_10823469	Not Available	519	Open in IMG/M
3300017955\|Ga0187817_10971205	Not Available	544	Open in IMG/M
3300018001\|Ga0187815_10036483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2081	Open in IMG/M
3300018006\|Ga0187804_10424635	All Organisms → cellular organisms → Bacteria → Terrabacteria group	591	Open in IMG/M
3300018025\|Ga0187885_10254202	Not Available	802	Open in IMG/M
3300018086\|Ga0187769_11080693	Not Available	607	Open in IMG/M
3300020581\|Ga0210399_10479705	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1035	Open in IMG/M
3300020582\|Ga0210395_11023616	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300021181\|Ga0210388_10138849	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300021406\|Ga0210386_11230636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300021478\|Ga0210402_10798059	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300022557\|Ga0212123_10141121	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1876	Open in IMG/M
3300022709\|Ga0222756_1083568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	525	Open in IMG/M
3300024275\|Ga0247674_1030813	Not Available	632	Open in IMG/M
3300024283\|Ga0247670_1048048	Not Available	770	Open in IMG/M
3300025906\|Ga0207699_10398230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300025916\|Ga0207663_10323172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1160	Open in IMG/M
3300025916\|Ga0207663_10473473	Not Available	969	Open in IMG/M
3300025929\|Ga0207664_11091181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300025932\|Ga0207690_11415980	Not Available	581	Open in IMG/M
3300026377\|Ga0257171_1008066	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300027047\|Ga0208730_1009947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300027058\|Ga0209111_1025253	Not Available	723	Open in IMG/M
3300027604\|Ga0208324_1204018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300027648\|Ga0209420_1162270	Not Available	608	Open in IMG/M
3300027738\|Ga0208989_10238151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300027875\|Ga0209283_10369268	Not Available	939	Open in IMG/M
3300027884\|Ga0209275_10517281	Not Available	681	Open in IMG/M
3300028789\|Ga0302232_10614037	Not Available	534	Open in IMG/M
3300028884\|Ga0307308_10544119	Not Available	557	Open in IMG/M
3300029951\|Ga0311371_10659214	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300029951\|Ga0311371_12416129	Not Available	538	Open in IMG/M
3300030520\|Ga0311372_11814049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	727	Open in IMG/M
3300030524\|Ga0311357_10025922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6126	Open in IMG/M
3300030580\|Ga0311355_11007458	All Organisms → cellular organisms → Bacteria → Terrabacteria group	748	Open in IMG/M
3300030618\|Ga0311354_11049844	All Organisms → cellular organisms → Bacteria → Terrabacteria group	747	Open in IMG/M
3300031234\|Ga0302325_10279036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2741	Open in IMG/M
3300031234\|Ga0302325_10880796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300031561\|Ga0318528_10118199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1401	Open in IMG/M
3300031561\|Ga0318528_10551014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	619	Open in IMG/M
3300031564\|Ga0318573_10029009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2574	Open in IMG/M
3300031681\|Ga0318572_10503692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300031708\|Ga0310686_114247883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300031708\|Ga0310686_119390523	All Organisms → cellular organisms → Bacteria → Terrabacteria group	853	Open in IMG/M
3300031708\|Ga0310686_119401842	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300031713\|Ga0318496_10566686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	628	Open in IMG/M
3300031719\|Ga0306917_10889813	Not Available	697	Open in IMG/M
3300031723\|Ga0318493_10904998	Not Available	500	Open in IMG/M
3300031747\|Ga0318502_10511446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300031764\|Ga0318535_10164394	Not Available	991	Open in IMG/M
3300031765\|Ga0318554_10496099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300031765\|Ga0318554_10762194	Not Available	542	Open in IMG/M
3300031778\|Ga0318498_10128563	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031781\|Ga0318547_10937106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	541	Open in IMG/M
3300031782\|Ga0318552_10385199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	714	Open in IMG/M
3300031782\|Ga0318552_10681800	Not Available	524	Open in IMG/M
3300031792\|Ga0318529_10432719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	612	Open in IMG/M
3300031792\|Ga0318529_10482601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031794\|Ga0318503_10301101	Not Available	521	Open in IMG/M
3300031805\|Ga0318497_10140697	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300031819\|Ga0318568_10110619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1653	Open in IMG/M
3300031819\|Ga0318568_10408194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	846	Open in IMG/M
3300031823\|Ga0307478_10946033	All Organisms → cellular organisms → Bacteria → Terrabacteria group	720	Open in IMG/M
3300031845\|Ga0318511_10071735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1432	Open in IMG/M
3300031846\|Ga0318512_10212128	Not Available	949	Open in IMG/M
3300031860\|Ga0318495_10264163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	769	Open in IMG/M
3300031894\|Ga0318522_10013787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2502	Open in IMG/M
3300031896\|Ga0318551_10747429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300031912\|Ga0306921_10594555	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300031912\|Ga0306921_11564049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	718	Open in IMG/M
3300031941\|Ga0310912_11351709	Not Available	539	Open in IMG/M
3300031946\|Ga0310910_11273455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	569	Open in IMG/M
3300032001\|Ga0306922_11634857	Not Available	640	Open in IMG/M
3300032008\|Ga0318562_10051775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2253	Open in IMG/M
3300032009\|Ga0318563_10551955	Not Available	622	Open in IMG/M
3300032041\|Ga0318549_10080568	Not Available	1394	Open in IMG/M
3300032044\|Ga0318558_10025072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2462	Open in IMG/M
3300032065\|Ga0318513_10132514	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300032068\|Ga0318553_10109706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1412	Open in IMG/M
3300032094\|Ga0318540_10387915	Not Available	675	Open in IMG/M
3300032094\|Ga0318540_10593394	Not Available	534	Open in IMG/M
3300032261\|Ga0306920_102307264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300032897\|Ga0335071_11245353	Not Available	689	Open in IMG/M
3300033134\|Ga0335073_11719796	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300033158\|Ga0335077_11546600	Not Available	633	Open in IMG/M
3300033289\|Ga0310914_11819272	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.55%
Host-Associated	Host-Associated	1.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Aquatic	Environmental → Aquatic	11.59%
Plants	Host-Associated → Plants	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.43%
Freshwater	Environmental → Aquatic → Freshwater	10.87%
Peat	Environmental → Terrestrial → Peat	6.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.32%
Loam	Environmental → Terrestrial → Soil → Loam	15.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1012111392	3300002245	Forest Soil	MPDAPNTLPLLRLGRLVLDPELRALQPGHDASGLVATATVEVPDSVSEPQYAWDVALADAAREAGTLG
JGI26339J46600_100504843	3300003218	Bog Forest Soil	MTDAPVTLPLLRLGRLELDPGLRALQPGLAASDLVVTATVEVPESASEPQYAWDVA
JGIcombinedJ51221_103774712	3300003505	Forest Soil	MPDHSNITHPLLRLGRLPLGPGLRDLAPGSTGTDPVVTATVAVPDSSVSQAYAWDVAW
Ga0066677_102372721	3300005171	Soil	MPDAPNTLPLLRLGRLALDPGLRALQPGHDASGLVVTATVEVPDSVSEPQYAW
Ga0070710_102767931	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VESIERPLLRLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAW
Ga0070705_1000741533	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAPNTLPLLRLGRLVLDPGLRAFQPGHDASSLVATATIEVPDSVSEPQYAWDVALADAAREAGELG
Ga0070706_1001371441	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPDAPNTLPLLRLGRLELDPGLRALQPGQDASGLVATATVEVPDSVSEQQHAWDVALADAAREAG
Ga0070698_1007366401	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MADSPNTPPLLRLGRLELDPGLRALQPGQDASDLVATATVEVPDSVSEPQYAWDVALADAAREA
Ga0070697_1011265621	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAWEVAWA
Ga0070697_1018298992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MADTSITLPLLKLGRLQLDPGLRAIQPGSAASDLVVTAMVPVPESSANRQYAWDV
Ga0070761_107581651	3300005591	Soil	MQMITHPLLRLGRLELDPGLRALQPGSAASGLVVTATVAVPDTSADRSSAWDVAWADAAREAAEL
Ga0070702_1007005282	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAWEVAW
Ga0070712_1012386201	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDAPNSLPLLRLGRLVLDPGLRALQPGHDASGLVATATVEVPDSVSEPEYAWDVA
Ga0074059_116911192	3300006578	Soil	VEAIERPLLRLGRLELDAGLRALRPGPAVSDLVVTAAVEVPVSGSEPQYAWEVAWADAG
Ga0074054_118681792	3300006579	Soil	VEAIERPLLSLGRLELDAGLRALRPGPAVSDLVVTAAVEVPVSSSEPQYAWDVAWADAVREAESLGA
Ga0074057_123186471	3300006605	Soil	VEAIERPLLKLGRLELDAGLRALRPGAAASDLVVTAAVEVPESESERQYAWDV
Ga0079222_114334552	3300006755	Agricultural Soil	VEAIEHPLLRLGQLELDAGRRALRPGTAASELVVTATVEVPVSDSEPQYAWE
Ga0075425_1000894501	3300006854	Populus Rhizosphere	MPEGRIELPLLRLGRLELRPGLRALQPGQAASGLIVTAMVQVPDSGSERQYAW
Ga0099828_115913891	3300009089	Vadose Zone Soil	MPEGRSALPLLRLGRLELGPGLRALQPGPAASGLVVTAMIQVPDSGSERQYAW
Ga0099792_110622831	3300009143	Vadose Zone Soil	MPDAPLAHPLLKLGRLELDPALRAFQPGPAVSDLVVTATVEVPDSASERQQAWDVAWADAGREA
Ga0116222_11704221	3300009521	Peatlands Soil	MPDKPMITLPLLRLGRLQLSPGLRALQPGSAAASGLVVTATVIVPDSPADRQYAWDVAW
Ga0116218_12228942	3300009522	Peatlands Soil	MAGKPMITLPLLRLGRLQLDPALRVLQPGSAASGLVVTATVAVPDTPADRSYAWDVAWADAARE
Ga0126373_132372972	3300010048	Tropical Forest Soil	MPEGRSELPLLRLGRLELGPELRALQPAQAASGLIVTAMIQVPDSGSERQYAWDVAWSDA
Ga0126370_103971462	3300010358	Tropical Forest Soil	MPEGQSALPLLRLGRLEIGPGLRALQPGPAASGLVVTAVVQVPDSGSERQYAWDVAWSDAAREA
Ga0126376_100184231	3300010359	Tropical Forest Soil	MPTNPLLRLGRLALSPELRALQPGPGLVVTATVGVPDSSSERQHAWD
Ga0126378_122042421	3300010361	Tropical Forest Soil	MPTVPTTRPLLRLGRLELDPGLRALQPGSAASGLVVTATVEVPESVSEQPYAWEVAWAD
Ga0126379_103269061	3300010366	Tropical Forest Soil	MPEGQSALPLLRLGRLEIGPGLRALQPGPAASGLVVTAVVQVPDSGSERQYAWDVAW
Ga0126379_113403061	3300010366	Tropical Forest Soil	MPEGRNALPVLRLGRLELGPRLRALQPGHAASGLVVTAIVQMPDSGSERQYAWDVAWSDAAREA
Ga0136449_1028765881	3300010379	Peatlands Soil	MPDHPNITHPLLRLGRLPLGPGLRALAPGSPASGLMVTATVSVPDSATSRGYAWDVAW
Ga0136449_1031856371	3300010379	Peatlands Soil	MPDAPNTLPLLRLGRLELDPGLRALQPGQDASDLVATATVEVPDSESEPQQAWDVALADAAREAGK
Ga0137364_104107142	3300012198	Vadose Zone Soil	MPEGQSALPLLKLGRLELGPGLRALQPGAASGLVVTAMIEVPDSASDRQYAWEVAWS
Ga0137363_112109041	3300012202	Vadose Zone Soil	MPDPLNITHPLLRLGRLPLGPGLRDLAPGSAAPDLVVTATVAVPDSSVSQAYAWDVAWADAVREAGQRG
Ga0137379_111663481	3300012209	Vadose Zone Soil	MPDAPNTLPLLRLGRLELDPALRALRPGRDASGLVATATVEVPDSVSEPQHAWDV
Ga0137390_108310971	3300012363	Vadose Zone Soil	MSERPVALPLLRLGRLELGLGLRALQPGLAASGLVVTAMIQVPDSGSERQYAWDVAWSDA
Ga0126369_136517742	3300012971	Tropical Forest Soil	MPDSTTITHPLLRLGRLTLGQGLRGLAPGSSASGLMVTATVTVPDSAVSRSYAWDVAWADAVREA
Ga0182041_102554224	3300016294	Soil	MPYAQGTNPLLRLGRLELDPELRAFQAGSAASDLVVTATVEVPDSVSEPQYAWDVAWADAGREAGE
Ga0182033_116847242	3300016319	Soil	MPERQSALPLLRLGRLELGPGLRALEPGPAASGLVVTAMVQVPDSGSERQYAWDVAWSDAAR
Ga0182035_105476253	3300016341	Soil	MPETPIITHPLLRLGRLPLGPGLRGLSPGSGPADLVVTATVAVPDAPVSRSYAWDVAWADAVREASQ
Ga0182034_104511461	3300016371	Soil	MPEGRNALPVLRLGRLELGPGLRALQPGQAASGLVATAILQMPDSGSERQYAWDVAWSDAAREA
Ga0182040_107640651	3300016387	Soil	MSDELIAFPLLRLGRLELEGGLRALRPGSAPSGLVVTAMVEVPESVSEPQYAWDVAWADAVRQ
Ga0182039_113795092	3300016422	Soil	MPEGRNALPVLRLGRLELGPGLRALQPGQAASGLVATAILQMPDSGSERQYAWDVAWSDAAREAGTLAAD
Ga0187818_105037141	3300017823	Freshwater Sediment	MPDSPIITHPLLRLGRLALGPGLHGLPPGSAESGLVVTATVAVPDAPVSRSYAWDVAWADAVREAS
Ga0187820_10992821	3300017924	Freshwater Sediment	MPGSLIVTHPLLRLGRLSLGPELRGLVPGQPGPGLVVTATVTVPDAPVS
Ga0187807_10200671	3300017926	Freshwater Sediment	MPDTPIAVPLLRLGRLELDPGLRALEPGSVASDLVVTATVEVPVSVSEPQYAW
Ga0187814_100682261	3300017932	Freshwater Sediment	MPDTPIAVPLLRLGRLELDPGLRALEPGSVASDLVVTATVEVPVSVSEPQYAWDVAWAD
Ga0187801_103218241	3300017933	Freshwater Sediment	MITLPLLRLGRLQLDPALRVLQPGSAASGLVVTATVAVPDTPADRSYAWDVAWA
Ga0187809_100812203	3300017937	Freshwater Sediment	MPHAPDNVALLRLGRLELDPGLRALQPGSAASDLVVTATVEVPESGSEPGYAWDVAWADAMREASEL
Ga0187809_102078522	3300017937	Freshwater Sediment	MPDSPKITHPLLRLGRLALGPGLHGLPPGSAESGLVVTATVAVPDAPV
Ga0187809_103308031	3300017937	Freshwater Sediment	VEAIERPLLRLGRLELDAGLRVLRPGRAASDLVVTATVEVPVSDSEPQYAWEVAWADAG
Ga0187808_100374021	3300017942	Freshwater Sediment	MITLPLLRLGRLQLDPALRVLQPGSAASGLVVTATVAVPDTPADRSYAWDVAWADAAREAGRLGA
Ga0187879_108234691	3300017946	Peatland	MPASPNSTHPLQRLGRLSLSPALRGLEPDPAGSDLAVTATVAVPDAPVSRSTAWEVAWADAAREA
Ga0187817_109712052	3300017955	Freshwater Sediment	LPRPPPVGCDGSMPDTPIAVPLLRLGRLELDPGLRALEPGSVASDLVVTATVEVPVSVSE
Ga0187815_100364831	3300018001	Freshwater Sediment	MPDSPKITHPLLRLGRLALGPGLHGLPPGSAESGLVVTATVAAPDAPVSRSYAWDVA
Ga0187804_104246352	3300018006	Freshwater Sediment	MPDSPIITHPLLRLGRLALGPGLHGLPPGSAESGLVVTATVAVPDAPVSRSY
Ga0187885_102542022	3300018025	Peatland	MITLPLLRLGRLQLDPGLRALRPGSARPGHVVTATVTVPDSSADQQYAWDVAWA
Ga0187769_110806931	3300018086	Tropical Peatland	MPDTPIITHPLLRLGRLPLEPGLRGLAPGTAESGLVATATVAAPDSSTSRAYA
Ga0210399_104797052	3300020581	Soil	MPDHPNITHPFLRLGRLPLGPGLRGLAPGLPASGLMVTATVSVP
Ga0210395_110236161	3300020582	Soil	MPHAPDNVALLRLGRLELSPALRALQPGPAVSDLVVTATVEVPESGSEPGYAWDVAWADAMREA
Ga0210405_101932221	3300021171	Soil	MPDAPNTLPLLRLGRLELDPGLRALQPGQDASDLVATATVEVPDSESEPQHAW
Ga0210388_101388491	3300021181	Soil	MPDAPNTLPLLRLGRLELDPGLRTLQPGQDASGLVATATVEVPDSESEPQYAWDVAL
Ga0210386_112306362	3300021406	Soil	MPDHSNITHPLLRLGRLPLGPGLRDLAPGSAGADLVVTATVAVPDSSVSQASAWDVAWADAVREAGQRG
Ga0210402_107980592	3300021478	Soil	MPDAPLALPLLKLGRLELDPALRAVQPGPAVSDLVVTATVEVPDSASERQQAWDVAW
Ga0212123_101411214	3300022557	Iron-Sulfur Acid Spring	MPDHSNITHPLLRLGRLPLGPGLRDLAPGSAGADLVVTATVAVPDSSVSQASAWDVAWA
Ga0222756_10835681	3300022709	Soil	MPDAPNTLPLLRLGRLELDPGLRALQPGQNASDLVATATVEVPDSESEPQHAWDVALADAAREAGKL
Ga0247674_10308132	3300024275	Soil	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAWEVAWTDAG
Ga0247670_10480481	3300024283	Soil	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPLY
Ga0207699_103982301	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTAMVEVPVSDSEPQYAWEVAWADA
Ga0207663_103231722	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPDAPNSLPLLRLGRLVLDPGLRALQPGHDASGLVATATVEVPDSVSEPEYAWDVALADA
Ga0207663_104734733	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAWEV
Ga0207664_110911812	3300025929	Agricultural Soil	MPEGRIELPLLRLGRLELRPGLRALQPGQAASGLIVTAMVQVPDSGSERQYAWDVAWSDAAREAS
Ga0207690_114159802	3300025932	Corn Rhizosphere	VEAIERPLLLLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSSRSMPGRW
Ga0257171_10080661	3300026377	Soil	MPDAPNTLPLLRLGRLVLDPGLRAFQPGHDASSLVATATVEVPDSVSEPQYAWDVALADA
Ga0208730_10099473	3300027047	Forest Soil	MPDHSNITHPLLRLGRLPLGPGLRDLAPGSTGTNPVVTATVAVPDSSVSKAYAWDVA
Ga0209111_10252532	3300027058	Forest Soil	VEAIERPLLRLGRLELDAGLRALRPGPAASDLVVTATVEVPVSDSEPQYAW
Ga0208324_12040182	3300027604	Peatlands Soil	MITLPLLRLGRLQLDPALRVLQPGSAASGLVVTATVAVPDTPADRSYAWDVAWADAARE
Ga0209420_11622701	3300027648	Forest Soil	MPHSPNNLPLLRLGRLELGPELRAFQPGSSASDLVVTATVEVPDSPSEQQNAWDVAWADAIREASGLGA
Ga0208989_102381512	3300027738	Forest Soil	MPDAPNTLPLLRLGRLVLDPELRALQPGHDASGLVATATVEVPDSVSEPQYAWDVALADAAR
Ga0209283_103692681	3300027875	Vadose Zone Soil	MITLPLLRLGRLQLDPGLRALQPGSAASGLVVTATVPVPDSSADRQYAWDV
Ga0209275_105172812	3300027884	Soil	MPHSPNNLPLLKLGRLELGPELRAFQPSSSASDLVVTATVEVPDSPSEQQNAWDVAWADA
Ga0302232_106140371	3300028789	Palsa	MPDHSNITHPLLRLGQLPLGPGLRDLTPGSAPSDLVVTATVAVPDSSVSQSY
Ga0307308_105441191	3300028884	Soil	VEAIERPLLRLGRLELDAGLRALRPGPAASDLVVTAAVEVPVSDSEPQYAWEVA
Ga0311371_106592141	3300029951	Palsa	MTGKKEITLPLLKLGRLPLDPALRARQPGSAASGLVVTATVPVPDAPTERQYAWEVAWADAVR
Ga0311371_124161291	3300029951	Palsa	MPDHSNITHPLLRLGQLPLGPGLRDLTPGSAPSDLVVTAAVAVPDSSVS
Ga0311372_118140491	3300030520	Palsa	MTGKTTITHPLLRLGRLQLDPALRALQPGSAGLVVTATVAVPDTSAERSYAWDVAWADAA
Ga0311357_100259221	3300030524	Palsa	MPDHSNITHPLLRLGQLPLGPGLRDLTPGSAPSDLVVTAAVAVPDSSVSQSYAWDVAWTD
Ga0311355_110074581	3300030580	Palsa	MPANPNITHPLQRLGHLSLTPGLRELAPDAAQPGLAVTATVAVP
Ga0311354_110498441	3300030618	Palsa	MPDHSNITHPLLRLGQLPLGPGLRDLTPGSAPSDLVVTAAVAVPDSSVSQSYAWDVAWTDAVREA
Ga0302325_102790361	3300031234	Palsa	MTGKTTITHPLLRLGRLQLDPALRALQPGSAGLVVTATVAVPDTSAERSYAWDVAW
Ga0302325_108807963	3300031234	Palsa	MPDHSNITHPLLRLGQLPLGPGLRDLTPGSAPSDLVVTAAVAVPDSSVSQSYAWDVAWTDAVREASEQG
Ga0318528_101181994	3300031561	Soil	MITHPLLRLGRLPLGPGLRGLSPGSGPADLVVTATVAVPDAPVSRSYAWDVAWADAVREASQLG
Ga0318528_105510142	3300031561	Soil	MPYAQGTNPLLRLGRLELDPELRAFQAGSAASDLVVTATVEVPDSVSEPQYA
Ga0318573_100290096	3300031564	Soil	MPYAQGTNPLLRLGRLELDPELRAFQPGSAASDLVVTATVEVPDSVSEPQYAW
Ga0318573_102771952	3300031564	Soil	MTRPLLRLGRLELDPGLRAVQPDSAASGPVVTATVEVPESVSERQ
Ga0318572_105036921	3300031681	Soil	MPYAQGTNPLLRLGRLELDPELRAFQAGSAASDLVVTATVEVPDSVSEPQYAW
Ga0310686_1142478831	3300031708	Soil	MPDHSNITHPLLRLGRLPLGPGLRDLAPNSAGSDLVVTATVAVPDSSVSQAYAW
Ga0310686_1193905232	3300031708	Soil	MPDHSNITHPLLRLGRLPLGAGLRDLAPGSAGSDLVVTATVAVPDSSVSQAYAWDVAWAD
Ga0310686_1194018421	3300031708	Soil	MPDHSNITHPLLRLGRLPLGPGLRDLAPGSAGSDLVVTATVAVPDSSVSQAYAWDVAWAD
Ga0318496_105666862	3300031713	Soil	MPSVPVTLPLLRLGRLELDPGLRAFQPGAAASGLVVTATVEVPESVSEQQYAWDVA
Ga0306917_108898131	3300031719	Soil	MPETPIITHPLLRLGRLPLGPGLRGLSPGSGPADLVVTATVAVPDAPVSRSYAW
Ga0318493_109049981	3300031723	Soil	MTRPLLRLGRLELDPALRAVQPDSAASGPVVTATVEVPESVSERQYAWEVAWADAVR
Ga0318502_105114461	3300031747	Soil	MSSASIALPLSRLGRLELDPGLRALQSGPAGSDLVVTATVELPESASERQHAWDVAWADAVRQAGR
Ga0318535_101643942	3300031764	Soil	MSDELIAFPLLRLGRLELEGGLRALRPGSAPSGLVVTAMVEVPESVSEPQYAWDVAWAD
Ga0318554_104960991	3300031765	Soil	MSSASIALPLSRLGRLELDPGLRALQSGPAGSDLVVTATVELPDSASERQHAWDVA
Ga0318554_107621941	3300031765	Soil	MTRPLLRLGRLELDPGLRAVQPDSAASGPVVTATVEVPESVSERQYAWEVAWADAVR
Ga0318498_101285633	3300031778	Soil	MPYAQGTNPLLRLGRLELDPELRAFQAGSAASDLVVTATVEVPDSVSEPQYAWD
Ga0318547_109371061	3300031781	Soil	MPSVPITLPLLRLGRLELGPGLRAFQPGPAASDLVVTAAVEVPESVSEPQYAWDVAWADAVREASQL
Ga0318552_103851992	3300031782	Soil	MTRPLLRLGRLELDPGLRAVQPDSAASGPVVTATVEVPESVSERQYAWEVAWADAVREAGRLG
Ga0318552_106818001	3300031782	Soil	MPDSTTITHPLLRLGRLARGPGLRALAPGSAGSGLVATATVAAPESPVSRPYAWDVAWAD
Ga0318529_104327191	3300031792	Soil	MPERQSALPLLRLGRLELGPGLRALEPGPAASGLVVTAMVQVPDSGSERQYAWDVAWSDAAREAKR
Ga0318529_104826012	3300031792	Soil	MPYAQGTNPLLRLGRLELDPELRAFQPGSAASDLVVTATVEVPDSVSEPQYAWDVAWADAVREA
Ga0318503_103011012	3300031794	Soil	MTRPLLRLGRLELDPALRAVQPDSAASGPVVTATVEVPESVSERQYA
Ga0318497_101406971	3300031805	Soil	MPEGQGALPLLRLGRLELGPGLRAFQPAPPASGLVVTAMVQVPDSASERQYAWDVAWSDAAREASGLGV
Ga0318568_101106191	3300031819	Soil	MSNAPIAIPLLRLGRLELGPGLRALRLDPAASDLVVTATVEAPESASEPQYAWDVAWADAVR
Ga0318568_104081942	3300031819	Soil	MPSVPITLPLLRLGRLELGPGLRAFQPGPAASDLVVTAAVEVPESVSEPQYARDVAWADAVREASQLG
Ga0307478_109460332	3300031823	Hardwood Forest Soil	MPDHSNITHPLLRLGRLPLGPGLRDLVPGTAGSDLVVTATVAVPDSSVSQAYAWDVAWTDAVREAGQL
Ga0318511_100717353	3300031845	Soil	MPDSTTITHPLLRLGRLALGPGLRALAPGSAGSGLVATATVAAPESPVSRPYAWDVA
Ga0318512_102121282	3300031846	Soil	MSDELIAFPLLRLGRLELEGGLRALRPGSAPSGLVVTAMVEVPESVSEPQYAWDVAWRTA
Ga0318495_102641632	3300031860	Soil	MPSVPVTLPLLRLGRLELDPGLRAFQPGAAASGLVVTATVEVPESVSEQQYAWDVAWADAVRQAG
Ga0318522_100137871	3300031894	Soil	MPEGRNALPVLRLGRLELGPGLRDFQPGQAASDLVVTAVVQVPDSGSERQYAWDVAWSDAAREAG
Ga0318551_107474291	3300031896	Soil	MSNAPIAIPLLRLGRLELGPGLRALRLDPAASDLVVTATVEAPESASEPQYAWDVAWADAVREAETL
Ga0306921_105945551	3300031912	Soil	MPYAQGTNPLLRLGRLELDPELRAFQAGSAASDLVVTATVEVPDSVSEPQYAWDVAWA
Ga0306921_115640491	3300031912	Soil	MPSVPMTRPLLRLGRLELDPALRAVQPDSAASGPVVTATVEVPESVSERQYAWEVAWADAVREAGR
Ga0310912_113517091	3300031941	Soil	MPEGQGALPLLRLGRLELGPGLRAFQPAPPASGLVVTAMVQVPDSASERQYAWDVAWSDAAREASGLG
Ga0310910_112734552	3300031946	Soil	MPDYPNITHPLLRLGRLSLGPGLRALAPGSAASGLMVTATVSVPDSATSRSYAWDVAWADAVREASLQ
Ga0306922_116348571	3300032001	Soil	MPDHPNITHPLLRLGRLPLGPGLRALAPGSAASGLMVTATVSVPDSATSRS
Ga0318562_100517751	3300032008	Soil	MTRPLLRLGRLELDPGLRAVQPDSAASGPVVTATVEVPESVSERQYAWEVAWADAVREAG
Ga0318563_105519552	3300032009	Soil	MPSVPVIRPLLRLGRLELDPGLRAFQPGSAASGLVVTATVEVPESVSEQQYAWDVAW
Ga0318549_100805681	3300032041	Soil	MPEGQGALPLLRLGRLELGPGLRAFQPAPPASGLVVTAMVQVPDSASERQYAWDVAW
Ga0318558_100250721	3300032044	Soil	MPEGRNALPVLRLGRLELGPGLRALQPGQAASGLVATAILQMPDSGSERQYAWDVAWSD
Ga0318513_101325141	3300032065	Soil	MSDALIAFPLLRIGRLELGRGLRALQPGSASAGPVVTAMVEVPASVSEPQYSWDVAWADAVRQATSQEY
Ga0318553_101097062	3300032068	Soil	MSSASIALPLSRLGRLELDPGLRALQSGPAGSDLVVTATVELPESASERQHAWDVA
Ga0318540_103879152	3300032094	Soil	MPEGQGALPLLRLGRLELGPGLRAFQPAPPASGLVVTAMVQVPDSASERQYAWDVAWSD
Ga0318540_105933941	3300032094	Soil	MSSASIALPLSRLGRLELDPGLRALRSGPAGSDLVVTATVELPESASERQHAWDVAWAD
Ga0306920_1023072641	3300032261	Soil	MSSASIALPLSRLGRLELDPGLRALQSGPAGSDLVVTATVELPESASERQHAWDVAWADAVR
Ga0335071_112453531	3300032897	Soil	MSDASIAFPLLRLGRLELGRGLRALQPGSAPAGLVVTAMVEVPESVSEPQYSWDVAWADAVRQ
Ga0335073_117197962	3300033134	Soil	MPHAPNTLPLLRLGRLELGPELRAFQPGPDASDLVVTATVEVPDSPSEQQDAWDV
Ga0335077_115466001	3300033158	Soil	MPHTPDTLPLLRLGRLVLGPELRALQPSPAASDLVVTATVEVPDSPSQQQDAWDVAWA
Ga0310914_118192722	3300033289	Soil	MPSVPITLPLLRLGRLELGPGLRAFQPGPAASDLVVTAAVEVPESVSEPQYAWDVAWADA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences