Metagenome / Metatranscriptome Family F055908

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055908
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	59 residues
Representative Sequence	GRYYYLTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMMEG
Number of Associated Samples	118
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	92.03 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.551 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.217 % of family members)
Environment Ontology (ENVO)	Unclassified (23.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.36% β-sheet: 0.00% Coil/Unstructured: 38.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00293	NUDIX	29.71
PF08241	Methyltransf_11	1.45
PF00535	Glycos_transf_2	1.45
PF06823	DUF1236	0.72
PF00732	GMC_oxred_N	0.72
PF07681	DoxX	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.83 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	94.20 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.49 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.49 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.62 %
Unclassified	root	N/A	1.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.49 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	4.35 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.62 %
Unclassified	root	N/A	1.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.49 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	4.35 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	3.62 %
Unclassified	root	N/A	1.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.49 %
Rhodopseudomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	4.35 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3.62 %
Unclassified	root	N/A	1.45 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0749949	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300004643\|Ga0062591_101007974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300005166\|Ga0066674_10175596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300005169\|Ga0066810_10033912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300005181\|Ga0066678_10169182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300005184\|Ga0066671_10214241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300005347\|Ga0070668_101605739	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005363\|Ga0008090_10107778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300005366\|Ga0070659_100408864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	1147	Open in IMG/M
3300005436\|Ga0070713_100350345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	1370	Open in IMG/M
3300005437\|Ga0070710_10178614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1327	Open in IMG/M
3300005447\|Ga0066689_10305612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300005457\|Ga0070662_100500443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	1013	Open in IMG/M
3300005467\|Ga0070706_100781036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300005468\|Ga0070707_101345354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300005536\|Ga0070697_100831853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300005548\|Ga0070665_101042645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300005713\|Ga0066905_100176167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1572	Open in IMG/M
3300005713\|Ga0066905_100609902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	925	Open in IMG/M
3300005713\|Ga0066905_101186023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300005713\|Ga0066905_101844821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300005713\|Ga0066905_102303347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300005764\|Ga0066903_103675815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005764\|Ga0066903_105768199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300005764\|Ga0066903_106774919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005764\|Ga0066903_107274611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300006028\|Ga0070717_11097922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300006046\|Ga0066652_100391497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300006175\|Ga0070712_101772740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300006178\|Ga0075367_10213300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	1207	Open in IMG/M
3300006195\|Ga0075366_10350567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp.	906	Open in IMG/M
3300006796\|Ga0066665_11614854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300006800\|Ga0066660_10411681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1119	Open in IMG/M
3300006846\|Ga0075430_101512024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	551	Open in IMG/M
3300006904\|Ga0075424_102716674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300009137\|Ga0066709_101524220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300009147\|Ga0114129_13403310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300009177\|Ga0105248_11710586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300009545\|Ga0105237_12292213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300009792\|Ga0126374_11352310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300010043\|Ga0126380_11623498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300010359\|Ga0126376_11601620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300010362\|Ga0126377_13579781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300010366\|Ga0126379_10028473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4321	Open in IMG/M
3300010376\|Ga0126381_103589984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300010376\|Ga0126381_103981744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300010398\|Ga0126383_12694109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300010398\|Ga0126383_13654461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300012202\|Ga0137363_10832827	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300012205\|Ga0137362_11254056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300012360\|Ga0137375_10956021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300012907\|Ga0157283_10072558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300012908\|Ga0157286_10335190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300012917\|Ga0137395_11068158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300012918\|Ga0137396_10889896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300012924\|Ga0137413_11109801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300012960\|Ga0164301_10116777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300012961\|Ga0164302_11470478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300012971\|Ga0126369_13257158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300013105\|Ga0157369_12435204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300013306\|Ga0163162_11442459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300014487\|Ga0182000_10558491	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300015200\|Ga0173480_10900098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300015372\|Ga0132256_100124477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2549	Open in IMG/M
3300015374\|Ga0132255_101368714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1069	Open in IMG/M
3300016270\|Ga0182036_11038332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300016294\|Ga0182041_11430273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300016319\|Ga0182033_10031810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3382	Open in IMG/M
3300016341\|Ga0182035_12087651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300016357\|Ga0182032_10959428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300016371\|Ga0182034_10195051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300016371\|Ga0182034_10496830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300016371\|Ga0182034_11246601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300016404\|Ga0182037_12023594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300016445\|Ga0182038_11670976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300017654\|Ga0134069_1106271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300017657\|Ga0134074_1235695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300017965\|Ga0190266_10167054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1011	Open in IMG/M
3300017965\|Ga0190266_10298788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300018031\|Ga0184634_10558300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300018074\|Ga0184640_10463001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300018076\|Ga0184609_10584847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300018468\|Ga0066662_10410495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300020002\|Ga0193730_1194022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300020579\|Ga0210407_11003725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300021078\|Ga0210381_10369002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300021082\|Ga0210380_10263841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300021168\|Ga0210406_10368944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1155	Open in IMG/M
3300021560\|Ga0126371_12158970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300021560\|Ga0126371_12446966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300021560\|Ga0126371_12752749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300022694\|Ga0222623_10314098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300022694\|Ga0222623_10408046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300025885\|Ga0207653_10412390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300025901\|Ga0207688_10424539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300025915\|Ga0207693_11271569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300025916\|Ga0207663_10500034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300025930\|Ga0207701_10090757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2749	Open in IMG/M
3300026317\|Ga0209154_1306392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300026326\|Ga0209801_1300471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300028711\|Ga0307293_10124362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300028782\|Ga0307306_10029809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1289	Open in IMG/M
3300028784\|Ga0307282_10174704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1022	Open in IMG/M
3300028784\|Ga0307282_10234061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300028787\|Ga0307323_10059879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1347	Open in IMG/M
3300028814\|Ga0307302_10401787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300028824\|Ga0307310_10253605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300028876\|Ga0307286_10033887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1693	Open in IMG/M
3300028878\|Ga0307278_10390266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300028884\|Ga0307308_10440925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300031561\|Ga0318528_10008856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4500	Open in IMG/M
3300031573\|Ga0310915_10830158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300031668\|Ga0318542_10311662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300031680\|Ga0318574_10176809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300031719\|Ga0306917_10012318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4976	Open in IMG/M
3300031720\|Ga0307469_12334576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300031740\|Ga0307468_100349765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1101	Open in IMG/M
3300031751\|Ga0318494_10002047	All Organisms → cellular organisms → Bacteria → Proteobacteria	8430	Open in IMG/M
3300031769\|Ga0318526_10202371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300031795\|Ga0318557_10124725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300031799\|Ga0318565_10571144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300031832\|Ga0318499_10349562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300031846\|Ga0318512_10026210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2457	Open in IMG/M
3300031846\|Ga0318512_10541858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300031890\|Ga0306925_11298127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300031890\|Ga0306925_11926644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031941\|Ga0310912_10096469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2170	Open in IMG/M
3300031947\|Ga0310909_10169937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1801	Open in IMG/M
3300031959\|Ga0318530_10075933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300031959\|Ga0318530_10378715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300032054\|Ga0318570_10412005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300032060\|Ga0318505_10180309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300032065\|Ga0318513_10105008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300032065\|Ga0318513_10350280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300032205\|Ga0307472_102514426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300032261\|Ga0306920_103819178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.41%
Host-Associated	Host-Associated	11.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	11.59%
Aquatic	Environmental → Aquatic	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.97%
Sediment	Environmental → Aquatic → Sediment	3.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Roots	Host-Associated → Plants → Roots	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.57%
Loam	Environmental → Terrestrial → Soil → Loam	13.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07499491	3300000033	Soil	GAGRYYYLTWLLTLLVVAVWVRAEGVELLRRWFPDVCRRVAKHPASIAMAHGLDRIARMIA*
Ga0062591_1010079741	3300004643	Soil	YAGAGRYYYLTWLLTLLVVAVWVRAEGVELLRRWFPDVCRRVAKHPASIAMAHGLDRIARMIA*
Ga0066674_101755961	3300005166	Soil	YLTWLLTLLVVAAWVHGEGLNLLRRYCPRFSARMAKHPGRLALARGLQRMAGMVQRQ*
Ga0066810_100339122	3300005169	Soil	SAGRYYYLTWLLTLLVVAVWVHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA*
Ga0066678_101691821	3300005181	Soil	WVHGEGLSLLRRYCPRFSARMAKHPGRLALARGLQRMAGMLERCPRGRLLPSC*
Ga0066671_102142411	3300005184	Soil	RYYYLTWLLTLLVVAAWVHGEGLEIVRRRFPRLTDRLAKHPACLALARALRRMGEMVAG*
Ga0070668_1016057391	3300005347	Switchgrass Rhizosphere	YYYLTWLLTLLVVAAWVHGEGIDILRRRFPDFSERIAKHPASVAFVRGLDRIGGMIA*
Ga0008090_101077782	3300005363	Tropical Rainforest Soil	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLVIVRRWFPHVSARVAKHPASLALARGLNSMSEMVQP*
Ga0070659_1004088641	3300005366	Corn Rhizosphere	LFYASAGRYYYLTWLLTLLVVAVWVHGEGIEIVRRRFPNFSQRVAKHRAGIAFVHGLGRVARMVA*
Ga0070713_1003503453	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QQAVGLFYASAGRYYYLTWLLTLLVVAVWLHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA*
Ga0070710_101786141	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LVVAAWVHGEGLDMMRRRFPRLTERVAKHPACLALARALRRMGEMVEG*
Ga0066689_103056121	3300005447	Soil	WLLTLLVVAAWVHGEGLGLLRRYCPRFSARMAKHPGRVAVARGLQRMTGMVQRQ*
Ga0070662_1005004431	3300005457	Corn Rhizosphere	GLFYASAGRYYYLTWLLTLLVVAVWLHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA*
Ga0070706_1007810362	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLPVVRRWFPRFTQRVAKHPASLALARGLARMSEMMQR*
Ga0070707_1013453542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PGDGRYHYLTWLLTLLVVAAWVHGEGLPVVRRWFPRFTQRVAKHPASLALARGLARMSEMMQR*
Ga0070697_1008318531	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AQHCVALFYPGDGRYHYLTWLLTLLVVAAWVHGEGLPIVRRWFPRFTQRGAKHPASLALAHGLDREMVER*
Ga0070665_1010426451	3300005548	Switchgrass Rhizosphere	AGATLVQQAVGLFYASAGRYYYLTWLLTLLVVAAWAYGEGIDVIRRRFPDFSQRIAKHPASVAFVRGLDRIGGMIA*
Ga0066905_1001761673	3300005713	Tropical Forest Soil	TLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMLRG*
Ga0066905_1006099021	3300005713	Tropical Forest Soil	ALTQQCVGLFYATAGRYYYLTWLLTLLVVAVWVHGEAAEMFRGRFPSLSERIARHGASEALERSLRRCAHMLASR*
Ga0066905_1011860232	3300005713	Tropical Forest Soil	LLVTAAWVHGEGLELFRRRFPTFTQRIAKHPARLALARGLQRMAAMVQR*
Ga0066905_1018448211	3300005713	Tropical Forest Soil	WVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLNSMSEMMEG*
Ga0066905_1023033471	3300005713	Tropical Forest Soil	LFYPGDGRYHYLTWLLTLLVVAAWVHGEGLDIVRRWFPHFSARVAKHPASLALTRGLARMSEMVER*
Ga0066903_1036758152	3300005764	Tropical Forest Soil	TLAQHCVALFYPGDGRYHYLTWLLTLLVVAAWVHGEVLPVLRRWFPRFTQRVAKHPASLALARGLGRMSEMLRG*
Ga0066903_1057681991	3300005764	Tropical Forest Soil	VALFYPGDGRYHYLTWLLTLLVVAAWVNGEGLVIVRRWFPHVSARVAKHPASLALARGLNSMSEMVRG*
Ga0066903_1067749191	3300005764	Tropical Forest Soil	LLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLERMSEMTQR*
Ga0066903_1072746111	3300005764	Tropical Forest Soil	ALFYPADGRYYYLTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMLRG*
Ga0070717_110979221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GRYYYLTWLLTLLVVAAWVHGEGLDMMRRRFPRFADRVAKHPACLALAGAFRRMGEMVEG
Ga0066652_1003914972	3300006046	Soil	IFYIIYGRYYYLTWLLTLLVVAAWVHGEGIVLCRRWFPVLSARVTTHPASVALARGLRHLSCMLPSAQH*
Ga0070712_1017727401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ALFYASAGRYYYLTWLLTLLVVAAWVHGEGLDMMRRRFPRFADRVAKHPACLALAGAFRRMGEMVEG*
Ga0075367_102133003	3300006178	Populus Endosphere	LTWLLTLLVVAVWVQGEGLEIIRRRFPDFSQRVAKHRASVALARGLDRIAGMIA*
Ga0075366_103505671	3300006195	Populus Endosphere	ASAGRYYYLTWLLTLLVVAVWVHGEGNEIVRRRFPNFSQRVAKHRAGIAFVHGLGRVARMVA*
Ga0066665_116148541	3300006796	Soil	PHPGDGRYHYLTWLLTLLVVAAWVHGEGLPIVRRWFPHFSARVTKHPASLALARGLDRMSEMLQR*
Ga0066660_104116812	3300006800	Soil	WVHGEGLDIARRRFPRFADRVAKHPAGLALARGLRRMGEMVER*
Ga0075430_1015120241	3300006846	Populus Rhizosphere	LDLLRRRFPDFTQRLAKYPARLALARGLHRMAAMVQR*
Ga0075424_1027166741	3300006904	Populus Rhizosphere	WVHGEGLPVVRRWFPRFTQRVAKHPASLALARGLARMSEMMQR*
Ga0066709_1015242201	3300009137	Grasslands Soil	HCVALFYPGDGRYHYLTWLLTLLVVAAWVHGEGLPVVRRWFPRFTQRVAKHPASLALARGLARMSEMMQR*
Ga0114129_134033101	3300009147	Populus Rhizosphere	VAAWVHGEGLDLLRRRFPAFTQRIAKNPARLALARYLQRMCAMLQR*
Ga0105248_117105862	3300009177	Switchgrass Rhizosphere	FYASAGRYYYLTWLLTLLVVMVWLHGDGIDILRRRFPDATQRIAKHPASLVFVRGLDRIGGMIT*
Ga0105237_122922132	3300009545	Corn Rhizosphere	QGVGLFYAGAGRYYYLTWLLTLLVVAVWVRAEGVELLRRWFPDVCRRVAKHPASIAMAHGLDRIARMIA*
Ga0126374_113523101	3300009792	Tropical Forest Soil	LFYPGDGRYHYLTWLLTLLVVAAWVHGEVLPVLRRWFPRFTQRVAKHPASLALARGLGRMSEMLRG*
Ga0126380_116234981	3300010043	Tropical Forest Soil	VVAAWVHGEGLDMARRRFPRFADRVAKHPACRALARALRRMGEMVEG*
Ga0126376_116016201	3300010359	Tropical Forest Soil	YYYLTWLLTLLVVAAWVHGEGLDIVRRRFPHFSARVAKHPASLALTRGLARMSEMLER*
Ga0126377_135797812	3300010362	Tropical Forest Soil	GRYYYLTWLLTLLVVAVWVHGEGIALVRRRFPRLSQRVAEHPASAALGRDLDRIARPLDRDSR*
Ga0126379_100284736	3300010366	Tropical Forest Soil	LFYPADGRYYYLTWLLTLLVAAACVHGEGLDLLRRRFPAFAERVAKHPACLALARGLQRMAAMVER*
Ga0126381_1035899842	3300010376	Tropical Forest Soil	LFYPGDGRYHYLTWLLTLLVVAAWVNGEGLVIVRRWFPHVSARVAKHPASLALARGLNSMSEMVQP*
Ga0126381_1039817442	3300010376	Tropical Forest Soil	FYPADGRYYYLTWLLTLLVVAAWVHGEGVEIVGRWFPGFTQRVAKHPASLALARGLARMSEMMER*
Ga0126383_126941092	3300010398	Tropical Forest Soil	GRYYYLTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMMEG
Ga0126383_136544611	3300010398	Tropical Forest Soil	RYHYLTWLLTLLVVAAWVHGEGLAIVRRWFPHISARVAKHPASLALARGLNSMSEMVER*
Ga0137363_108328272	3300012202	Vadose Zone Soil	DLARRRFPRVTERIAEHPACLALARGLRRMGEMVEG*
Ga0137362_112540562	3300012205	Vadose Zone Soil	LLTLLVVAAWVHGEGLPIVRRWFPRFTQRVTKHPASLALARGLDRMCEMVER*
Ga0137375_109560211	3300012360	Vadose Zone Soil	YLTWLLTLLVVAVWINGEGIDLVRRRFPGFSERVAKHPASVALAGGLDRMSRMLDARS*
Ga0137390_119177331	3300012363	Vadose Zone Soil	WLLTLLVVAVWVEGEGIELSNKWFPGLVERLAKRPASLAIARGLDRMARLLDWGRAPP*
Ga0157283_100725582	3300012907	Soil	ASAGRYYYLTWLLTLLVVAVWWHDEGIEIVRRRFPDFCQRIAKHRGSIKFARGLDRIARMIA*
Ga0157286_103351901	3300012908	Soil	RYYYLTWLLTLLVVAAWVHGEGLDMMRRRFPRLTERVAKHPACLALARALRRMGEMVEG*
Ga0137395_110681582	3300012917	Vadose Zone Soil	AWVNGEGLDIVRRWFPRFTQRVAKHPASLALARGLARMSEMLQR*
Ga0137396_108898962	3300012918	Vadose Zone Soil	VVAAWVHGEGLPIVRRWFPQFCAWVAKHPASLALARGLDRMSEMMQR*
Ga0137413_111098011	3300012924	Vadose Zone Soil	GRYYYLTWLLTLLAVAAWVHGGGIDIFRRRFPDFSQRFANNPASLALARGLDRIARAIA*
Ga0164301_101167772	3300012960	Soil	VAAWVHGEGLDMMRRRFPRFADRVAKHPACLALAGAFRRMGEMVEG*
Ga0164302_114704781	3300012961	Soil	SAGRYYYLTWLLTLLVVAAWVHGEGIDMIRRRFPDFSQRIAKHPASVAFVRGLDRIGGMIA*
Ga0126369_132571581	3300012971	Tropical Forest Soil	PGDGRYHYLTWLLTLLVVAAWVHGEVLPVLRRWFPRFTQRVAKHPASLALARGLGRMSEMLRG*
Ga0157369_124352042	3300013105	Corn Rhizosphere	RYYYLTWLLTLLVVAVWLHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA*
Ga0163162_114424591	3300013306	Switchgrass Rhizosphere	AGATLVQQAVGLFYANAGRYYYLTWLLTLLVVAAWVHGEGIDILRRRFPDFSERIAKHPASVAFVRGLDRIGGMVA*
Ga0182000_105584911	3300014487	Soil	AWVHGEGLDLLRRRFPDFTQRVAKHPACLVLAHGLQRMAAMVER*
Ga0173480_109000982	3300015200	Soil	GLFYASAGRYYYLTWLLTLLVVAAWVHGEGIDMIRRRCRPDFSQRIARHPASVAFVRGLDRIGGMIG*
Ga0132256_1001244771	3300015372	Arabidopsis Rhizosphere	SAGRYYYLTWLLTLLVVMVWLHGDGIDILRRRFPDATQRIAKHPASLVFVRGLDRIGGMIT*
Ga0132255_1013687141	3300015374	Arabidopsis Rhizosphere	YYLAWLLTLLVVAAWVHGEGIDIFRRRFPDFTQRVANNPASLALARGLDRITRSIA*
Ga0182036_110383322	3300016270	Soil	LFYPGDGRYHYLTWLLSLLVVAAWVHGEGLAIVRRWFPHFNARVAKHPANLALARGLDRMSEMVRG
Ga0182041_114302732	3300016294	Soil	YHYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLERMSEMLEG
Ga0182033_100318101	3300016319	Soil	YPGDGRYHYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLARMSEMVEG
Ga0182035_120876512	3300016341	Soil	PADGRYYYLTWLLTLLLVAAWVHGEGLVMLRRWFPGFTQRVVKHPVSLALARGLARMSEMLQR
Ga0182032_109594282	3300016357	Soil	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLGIVRRWFPHFSARVAKHPLSLALARGLARMSEMLEG
Ga0182034_101950513	3300016371	Soil	AWVRGEGLVIVRRWFPHFSARVAKHPASLALTRGLTRMSEMVQG
Ga0182034_104968302	3300016371	Soil	LVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLARMSEMLEG
Ga0182034_112466012	3300016371	Soil	LTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMMEG
Ga0182037_120235941	3300016404	Soil	WLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLDRMSEMMEG
Ga0182038_116709761	3300016445	Soil	LLTLLVVAAWVHGEVLPIARRWFPQFSARVAKHPASLALARGLGRMSEMVQR
Ga0134069_11062712	3300017654	Grasslands Soil	GTLLVVAAWVHGEGLNLLRRYCPRFSARMAKHPGRLALARGLQRMAGMVQRQ
Ga0134074_12356952	3300017657	Grasslands Soil	LDLLRRRFPDFFERIAKHRACLALARALHRMAAMLER
Ga0190266_101670541	3300017965	Soil	GATLAQQAVGLFYAGAGRYYYLAWLLTLLVVAAWVHGEGIAIFHRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0190266_102987881	3300017965	Soil	ASAMLVQQCVVTFYAAAGRYQYLTWLLTSLVVAAWVEREGLPLLRRRFPAFTARVAHHPLSAALARGLARLSAA
Ga0184634_105583001	3300018031	Groundwater Sediment	GRYYYLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSRRVANNPASLALARGLDRIARAIA
Ga0184640_104630012	3300018074	Groundwater Sediment	WLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARVIA
Ga0184609_105848472	3300018076	Groundwater Sediment	RYYYLAWLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0066662_104104952	3300018468	Grasslands Soil	TLLVVAAWVHGEGLNLLRRYCPRFSARMAKHPGRLALARGLQRMAGMLERCPRGRLLPSC
Ga0193730_11940222	3300020002	Soil	WLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0210407_110037251	3300020579	Soil	YAIAGRYYYLTWLLTLLVVAAWVHGEGLDIARRGFPRVTERVAKHPARLALARGLRRMGEMMKG
Ga0210381_103690022	3300021078	Groundwater Sediment	ASAGRYYYLTWLLTLLVVMVWVHGEGIVMIRRRFPDFSQRIAKHPATVAFVRGLDRIGGMIA
Ga0210380_102638412	3300021082	Groundwater Sediment	QAVGLFYASAGRYYYLTWLLTLLVVAAWVHGEGIDIFRRRCPDFSQRVANNPASLALARGLDRIARAIA
Ga0210406_103689443	3300021168	Soil	WVHGEVLPIARRWFPRFTQRMAKRPASLALARGLDRMSEMLQR
Ga0126371_121589702	3300021560	Tropical Forest Soil	AAWVNGEGLAIVRRWSPHVSARVAKHPASLALARGLNSMSEMVRG
Ga0126371_124469661	3300021560	Tropical Forest Soil	QGVGLFLLTAGRYYYLTWLLTLLIVAAWVHGEGLDLVRRRFPDFAARIAKNRARVAAAGVLARMARMLA
Ga0126371_127527492	3300021560	Tropical Forest Soil	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLVIVRRWFPHVSARVAKHPASLALARGLNSMSEMVQP
Ga0222623_103140981	3300022694	Groundwater Sediment	AGATLVQQAVGLFYASAGRYYYLAWLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0222623_104080462	3300022694	Groundwater Sediment	TLAQQAVGLFYAGAGRYYYLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASLALARGLDRIARALA
Ga0207653_104123902	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VATLVQQAVGLFYASAGRYYYLTWLLTLLVVAVWLHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA
Ga0207688_104245391	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	SAGRYYYLTWLLTLLVVAAWVHGEGIDMIRRRCRPDFSQRIARHPASVAFVRGLDRIGGMIA
Ga0207693_112715693	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HGEGLDMMRRRFPRLTERVAKHPACLALARALRRMGEMVEG
Ga0207663_105000343	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LVVAAWVHGEGLDMMRRRFPRLTERVAKHPACLALARALRRMGEMVEG
Ga0207701_100907575	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TAVATLVQQAVGLFYASAGRYYYLTWLLTLLVVAVWLHDEGIEIVRRRFPDFCQRIAKHRGSIKFVRGLDRIARMIA
Ga0209154_13063921	3300026317	Soil	GDGRYHYLTWLLTLLVVAAWVHGEGLPIVRRWFPHFSARVAKHPASLALARGFGRMSEMVQR
Ga0209801_13004711	3300026326	Soil	ALCYPGDGRYHYLTWLLTLLVVAAWVHGEGLPIVRRWFPHFSARVAKHPASLALARGFGRMSEMVQR
Ga0307293_101243622	3300028711	Soil	LVQQAVGLFYASAGRYYYLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASRALARGLDRIARAIA
Ga0307306_100298091	3300028782	Soil	TAGATLVQQAVGLFYANAGRYYYLTWLLTLLAVAAWVHGEGIDILRRRFPDFSERIAKHPASVAFVRGLDRIGGMIA
Ga0307282_101747043	3300028784	Soil	GRYYYLAWLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0307282_102340611	3300028784	Soil	EGLDMMRRRFPRFADRVAKHPACLALARALRRMGEMVEG
Ga0307323_100598791	3300028787	Soil	YYLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASLALARGLDRIARVIA
Ga0307302_104017871	3300028814	Soil	YLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0307310_102536052	3300028824	Soil	AGATLVQQAVGLFYASAGRYYYLTWLLTLLVVAAWVHGEGIDIFRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0307286_100338874	3300028876	Soil	TLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0307278_103902662	3300028878	Soil	AVGLFYASAGRYYYLTWLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0307308_104409252	3300028884	Soil	RTLYYLAWLLTLLVVAAWVHGEGIDILRRRFPDFSQRVANNPASLALARGLDRIARAIA
Ga0318528_100088568	3300031561	Soil	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLARMSEMVEG
Ga0310915_108301582	3300031573	Soil	AQHCVALFYPGDGRYHYLTWLLTLLVVAAWVHGEGLGIVRRWFPHFSARVAKHPLSLALARGLARMSEMLEG
Ga0318542_103116621	3300031668	Soil	HYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLERMSEMLEG
Ga0318574_101768091	3300031680	Soil	LVVAAWVHGEGLAMLRRWFPRFTQRVAKHPVSLALARGLNSMSEMTQR
Ga0306917_100123187	3300031719	Soil	LVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLERMSEMLEG
Ga0307469_123345761	3300031720	Hardwood Forest Soil	ATLVQQCVGIFYATAGRYYYLTWLLTLLVVTVWINAEGIDLVRRRFPGFSERVARHPASVALARGLDRMSRMLDARS
Ga0307468_1003497653	3300031740	Hardwood Forest Soil	YLTWLLTLLVVAVWVHDEGIEIVRRRFPDFSQRVTKHRASIAFARGLDRIVRMIA
Ga0318494_1000204712	3300031751	Soil	HYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLARMSEMVEG
Ga0318526_102023712	3300031769	Soil	RYHYLTWLLTLLVVAAWVNGEGLDIVRRWFPHFSVRVAKHPLSLALARGLDRMSEMLER
Ga0318557_101247252	3300031795	Soil	YYYLTWLLTLLLVAAWVHGEGLATLRRWFPRFTQRVAKHPASLALARGLARMSEMMEG
Ga0318565_105711442	3300031799	Soil	WLLTLLVVAAWVHGEVLPIARRWFPQFSARVAKHPASLALARGLGRMSEMVQR
Ga0307473_112223501	3300031820	Hardwood Forest Soil	GRYHYLTWLLTLLVVAAWVEGEGIERLTKRFPGSLERLARRPASLAIARGLDRMARLLD
Ga0318499_103495622	3300031832	Soil	LLVMAAWVNGEGLAIVRRWFPHFSARLAKHPASLALAHGLARMSEMVER
Ga0318512_100262104	3300031846	Soil	PGDGRYHYLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLERMSEMLEG
Ga0318512_105418581	3300031846	Soil	FYPADGRYYYLTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPVSLALARGLARMSEMMEG
Ga0306925_112981272	3300031890	Soil	LTWLLTLLVVAAWVRGEGLVIVRRWFPHFSARVAKHPASLALTRGLTRMSEMVQG
Ga0306925_119266441	3300031890	Soil	RYYYLTWLLTLLVVAAWVHGEGLVMLRRWFPGFTQRVAKHPASLALARGLERMSEMTQR
Ga0310912_100964691	3300031941	Soil	YLTWLLTLLVVAAWVHGEGLVMLRRWFPRFTQRVAKHPASLALARGLERMSEMLEG
Ga0310909_101699371	3300031947	Soil	LTWLLTLLVVAAWVHGEGLPIVRRWFPRFTQRVAKHPAGLALARGLDRMCEMLQR
Ga0318530_100759331	3300031959	Soil	YYLTWLLTLLLVAAWVHGEGLATLRRWFPRFTQRVAKHPASLALARGLARMSEMMEG
Ga0318530_103787151	3300031959	Soil	TLAQHCVALFYPGDGRYHYLTWLLTLLVVAAWVNGEGLVIVRRWFPHFSARVAKHPASLALTHGLARMSEMVQG
Ga0318570_104120051	3300032054	Soil	FYPGDGRYHYLTWLLTLLVVAAWVHGEGLAIVRRWFPHISARVAKHPASLALARGLNSMSEMVER
Ga0318505_101803092	3300032060	Soil	VALFYPGDGRYHYLTWLLTLLVVAAWVNGEGLDIVRRWFPHFSVRVAKHPLSLALARGLDRMSEMLER
Ga0318513_101050083	3300032065	Soil	AWVNGEGLAIVRRWFPHFSARLAKHPASLALAHGLARMSEMVER
Ga0318513_103502801	3300032065	Soil	LTLLVVAAWVHGEVLPIARRWFPQFSARVAKHPASLALARGLGRMSEMVQR
Ga0307472_1025144261	3300032205	Hardwood Forest Soil	LTWLLTLLVVAVWVHGEGIDMIRRRFPDFSQRIAKHRASVAFVRGLDVIGRMIA
Ga0306920_1038191781	3300032261	Soil	GVALFYPADGRYYYLTWLLTLLVVAAWVHGEGLATLRRWFPRFTQRVAKHPASLALARGLARMSEMLQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055908

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences