Metagenome / Metatranscriptome Family F055888

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055888
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	63 residues
Representative Sequence	MRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAIIERNFDT
Number of Associated Samples	99
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.57 %
% of genes near scaffold ends (potentially truncated)	20.29 %
% of genes from short scaffolds (< 2000 bps)	81.16 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.493 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.290 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.68% β-sheet: 2.30% Coil/Unstructured: 54.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1j8mf1	1j8m	0.69516
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1ls1a1	1ls1	0.68234
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1okkd1	1okk	0.65674
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1wgwa1	1wgw	0.6461
a.24.13.0: automated matches	d6n9ba1	6n9b	0.64451

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02668	TauD	5.07
PF00795	CN_hydrolase	5.07
PF00909	Ammonium_transp	3.62
PF09537	DUF2383	3.62
PF00202	Aminotran_3	2.90
PF02597	ThiS	2.90
PF06850	PHB_depo_C	2.90
PF12695	Abhydrolase_5	2.17
PF00903	Glyoxalase	2.17
PF13650	Asp_protease_2	2.17
PF00296	Bac_luciferase	2.17
PF05853	BKACE	2.17
PF00528	BPD_transp_1	1.45
PF07366	SnoaL	1.45
PF03733	YccF	1.45
PF09297	zf-NADH-PPase	1.45
PF13458	Peripla_BP_6	1.45
PF02604	PhdYeFM_antitox	1.45
PF09296	NUDIX-like	1.45
PF03061	4HBT	0.72
PF01903	CbiX	0.72
PF02012	BNR	0.72
PF02518	HATPase_c	0.72
PF01547	SBP_bac_1	0.72
PF03741	TerC	0.72
PF13416	SBP_bac_8	0.72
PF12860	PAS_7	0.72
PF02656	DUF202	0.72
PF01061	ABC2_membrane	0.72
PF00067	p450	0.72
PF06035	Peptidase_C93	0.72
PF04280	Tim44	0.72
PF13515	FUSC_2	0.72
PF14559	TPR_19	0.72
PF01494	FAD_binding_3	0.72
PF02566	OsmC	0.72
PF02540	NAD_synthase	0.72
PF07859	Abhydrolase_3	0.72
PF00034	Cytochrom_C	0.72
PF08028	Acyl-CoA_dh_2	0.72
PF13561	adh_short_C2	0.72
PF13091	PLDc_2	0.72
PF01804	Penicil_amidase	0.72
PF05981	CreA	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.07
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	3.62
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	2.90
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	2.90
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	2.90
COG2816	NADH pyrophosphatase NudC, Nudix superfamily	Nucleotide transport and metabolism [F]	2.90
COG4553	Poly-beta-hydroxyalkanoate depolymerase	Lipid transport and metabolism [I]	2.90
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	2.17
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.17
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.45
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.45
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.45
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	1.45
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.45
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2124	Cytochrome P450	Defense mechanisms [V]	0.72
COG3045	Periplasmic catabolite regulation protein CreA (function unknown)	Signal transduction mechanisms [T]	0.72
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	0.72
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.72
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.72
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.72
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.72
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.72
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.72
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.72
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.72
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.72

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.06 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.07 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.72 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.62 %
Alphaproteobacteria bacterium 13_1_20CM_3_64_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.72 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.62 %
Alphaproteobacteria bacterium 13_1_20CM_3_64_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.72 %
Candidatus Accumulibacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	0.72 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.72 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.52 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2.17 %
Alphaproteobacteria bacterium 13_1_20CM_3_64_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.72 %
unclassified Sorangiineae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae	0.72 %
Candidatus Accumulibacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	0.72 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.52 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2.17 %
Alphaproteobacteria bacterium 13_1_20CM_3_64_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.17 %
Sphingomonas sp. Root50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. Root50	0.72 %
Sorangiineae bacterium NIC37A_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	0.72 %
Candidatus Accumulibacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	0.72 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z02IXUQX	Not Available	537	Open in IMG/M
3300001356\|JGI12269J14319_10000350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43670	Open in IMG/M
3300005518\|Ga0070699_100455225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300005529\|Ga0070741_10547506	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300005531\|Ga0070738_10161728	Not Available	1076	Open in IMG/M
3300005534\|Ga0070735_10002777	All Organisms → cellular organisms → Bacteria → Proteobacteria	15617	Open in IMG/M
3300005534\|Ga0070735_10189816	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005537\|Ga0070730_10781571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300005538\|Ga0070731_10138656	Not Available	1612	Open in IMG/M
3300005538\|Ga0070731_10391630	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300005541\|Ga0070733_10267461	Not Available	1126	Open in IMG/M
3300005541\|Ga0070733_10630474	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005542\|Ga0070732_10013285	All Organisms → cellular organisms → Bacteria → Proteobacteria	4558	Open in IMG/M
3300005542\|Ga0070732_10163149	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005554\|Ga0066661_10430231	Not Available	808	Open in IMG/M
3300006176\|Ga0070765_100154667	All Organisms → cellular organisms → Bacteria → Proteobacteria	2049	Open in IMG/M
3300006796\|Ga0066665_11551547	Not Available	519	Open in IMG/M
3300006804\|Ga0079221_10770496	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006903\|Ga0075426_11248585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300007982\|Ga0102924_1226832	Not Available	788	Open in IMG/M
3300009012\|Ga0066710_102159671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	815	Open in IMG/M
3300009038\|Ga0099829_11659627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300009088\|Ga0099830_10501885	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300009089\|Ga0099828_11694876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	556	Open in IMG/M
3300009090\|Ga0099827_10411071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1157	Open in IMG/M
3300009090\|Ga0099827_10539857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300009090\|Ga0099827_11779508	Not Available	537	Open in IMG/M
3300009090\|Ga0099827_11858900	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009137\|Ga0066709_103756182	Not Available	551	Open in IMG/M
3300009143\|Ga0099792_10953127	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010048\|Ga0126373_10021279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5489	Open in IMG/M
3300010048\|Ga0126373_10502975	Not Available	1255	Open in IMG/M
3300010048\|Ga0126373_13017366	Not Available	525	Open in IMG/M
3300010379\|Ga0136449_101080830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. Root50	1279	Open in IMG/M
3300010379\|Ga0136449_101674821	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300010396\|Ga0134126_10443130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300010396\|Ga0134126_11258398	Not Available	821	Open in IMG/M
3300012199\|Ga0137383_10384415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300012200\|Ga0137382_10330606	Not Available	1067	Open in IMG/M
3300012202\|Ga0137363_10354868	Not Available	1214	Open in IMG/M
3300012206\|Ga0137380_10299673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300012209\|Ga0137379_11575630	Not Available	556	Open in IMG/M
3300012210\|Ga0137378_11403390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300012211\|Ga0137377_10444925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300012211\|Ga0137377_10807690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	871	Open in IMG/M
3300012361\|Ga0137360_10892538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300012362\|Ga0137361_10783010	Not Available	869	Open in IMG/M
3300012363\|Ga0137390_11189878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	710	Open in IMG/M
3300012917\|Ga0137395_11264168	Not Available	512	Open in IMG/M
3300012925\|Ga0137419_10332058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	1171	Open in IMG/M
3300012927\|Ga0137416_11788821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300012930\|Ga0137407_11677848	Not Available	605	Open in IMG/M
3300014501\|Ga0182024_10002502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	45439	Open in IMG/M
3300015241\|Ga0137418_10351996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	1215	Open in IMG/M
3300015264\|Ga0137403_11557076	Not Available	513	Open in IMG/M
3300017822\|Ga0187802_10054168	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300017823\|Ga0187818_10002703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7447	Open in IMG/M
3300017924\|Ga0187820_1056423	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300017927\|Ga0187824_10205938	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300017928\|Ga0187806_1073070	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300017930\|Ga0187825_10008976	All Organisms → cellular organisms → Bacteria	3345	Open in IMG/M
3300017934\|Ga0187803_10035892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1969	Open in IMG/M
3300017970\|Ga0187783_10127569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1875	Open in IMG/M
3300017972\|Ga0187781_10544922	Not Available	834	Open in IMG/M
3300017973\|Ga0187780_10206630	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300017973\|Ga0187780_10878118	Not Available	651	Open in IMG/M
3300017973\|Ga0187780_11332799	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300017994\|Ga0187822_10232645	Not Available	627	Open in IMG/M
3300018001\|Ga0187815_10491618	Not Available	525	Open in IMG/M
3300018044\|Ga0187890_10781221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	540	Open in IMG/M
3300018062\|Ga0187784_10918857	Not Available	696	Open in IMG/M
3300018433\|Ga0066667_10405326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300018433\|Ga0066667_11081219	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300019887\|Ga0193729_1198819	Not Available	685	Open in IMG/M
3300020583\|Ga0210401_10147734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2198	Open in IMG/M
3300021388\|Ga0213875_10387588	Not Available	666	Open in IMG/M
3300021404\|Ga0210389_10510753	Not Available	945	Open in IMG/M
3300021420\|Ga0210394_10054313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3495	Open in IMG/M
3300021420\|Ga0210394_10972166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300021432\|Ga0210384_10127224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2286	Open in IMG/M
3300021441\|Ga0213871_10127095	Not Available	763	Open in IMG/M
3300021474\|Ga0210390_11606569	Not Available	512	Open in IMG/M
3300021477\|Ga0210398_10530319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	958	Open in IMG/M
3300021560\|Ga0126371_10072220	All Organisms → cellular organisms → Bacteria → Proteobacteria	3360	Open in IMG/M
3300021560\|Ga0126371_10099466	Not Available	2894	Open in IMG/M
3300021560\|Ga0126371_10286478	Not Available	1770	Open in IMG/M
3300022522\|Ga0242659_1036813	Not Available	822	Open in IMG/M
3300022717\|Ga0242661_1163617	Not Available	506	Open in IMG/M
3300026551\|Ga0209648_10350014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_3_64_12	1016	Open in IMG/M
3300027706\|Ga0209581_1075298	Not Available	1215	Open in IMG/M
3300027725\|Ga0209178_1172982	Not Available	755	Open in IMG/M
3300027842\|Ga0209580_10007480	All Organisms → cellular organisms → Bacteria → Proteobacteria	4662	Open in IMG/M
3300027842\|Ga0209580_10193986	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300027842\|Ga0209580_10320591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300027867\|Ga0209167_10333810	Not Available	822	Open in IMG/M
3300027869\|Ga0209579_10075109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1788	Open in IMG/M
3300027869\|Ga0209579_10263025	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300027882\|Ga0209590_10096743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1756	Open in IMG/M
3300027882\|Ga0209590_10435564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300027905\|Ga0209415_10001422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	45900	Open in IMG/M
3300027905\|Ga0209415_10027527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8373	Open in IMG/M
3300027968\|Ga0209061_1097126	Not Available	1043	Open in IMG/M
3300027986\|Ga0209168_10017297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4129	Open in IMG/M
3300027986\|Ga0209168_10271328	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300028047\|Ga0209526_10037279	All Organisms → cellular organisms → Bacteria → Proteobacteria	3423	Open in IMG/M
3300028536\|Ga0137415_10877699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300028906\|Ga0308309_10124012	All Organisms → cellular organisms → Bacteria → Proteobacteria	2040	Open in IMG/M
3300029636\|Ga0222749_10645246	Not Available	579	Open in IMG/M
3300030712\|Ga0307921_1030068	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300030740\|Ga0265460_11717126	Not Available	639	Open in IMG/M
3300030743\|Ga0265461_12006479	Not Available	660	Open in IMG/M
3300031670\|Ga0307374_10008454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15377	Open in IMG/M
3300031670\|Ga0307374_10018044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9195	Open in IMG/M
3300031670\|Ga0307374_10028185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6648	Open in IMG/M
3300031670\|Ga0307374_10149998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1815	Open in IMG/M
3300031708\|Ga0310686_108821718	Not Available	1126	Open in IMG/M
3300031708\|Ga0310686_109368848	Not Available	707	Open in IMG/M
3300031708\|Ga0310686_109389800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	637	Open in IMG/M
3300031708\|Ga0310686_113325829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031753\|Ga0307477_11013900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300032160\|Ga0311301_11943263	Not Available	691	Open in IMG/M
3300032770\|Ga0335085_10082351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4218	Open in IMG/M
3300032770\|Ga0335085_11372794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300032783\|Ga0335079_10000308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56274	Open in IMG/M
3300032805\|Ga0335078_10161701	All Organisms → cellular organisms → Bacteria	3155	Open in IMG/M
3300032805\|Ga0335078_10374644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300032892\|Ga0335081_10335764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1978	Open in IMG/M
3300032892\|Ga0335081_11670677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	696	Open in IMG/M
3300032892\|Ga0335081_12195404	Not Available	581	Open in IMG/M
3300032895\|Ga0335074_10250788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2083	Open in IMG/M
3300032895\|Ga0335074_10398539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300032895\|Ga0335074_10574936	Not Available	1136	Open in IMG/M
3300032895\|Ga0335074_11391841	Not Available	569	Open in IMG/M
3300032895\|Ga0335074_11545376	Not Available	524	Open in IMG/M
3300033134\|Ga0335073_11385888	Not Available	688	Open in IMG/M
3300033158\|Ga0335077_10367027	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300033158\|Ga0335077_11520083	Not Available	640	Open in IMG/M
3300033513\|Ga0316628_103473930	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.86%
Aquatic	Environmental → Aquatic	7.97%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.86%
Freshwater	Environmental → Aquatic → Freshwater	7.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.25%
Clay	Environmental → Terrestrial → Soil → Clay	3.62%
Loam	Environmental → Terrestrial → Soil → Loam	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.80%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	15.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030712	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - OX-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_03634050	2170459004	Grass Soil	MRPKVSFDSRNIWRRLETCKTVAQAYGWPPDDITRFGREVEQAFSYEDAMAIIERDFDVFRKREFEAS
JGI12269J14319_1000035032	3300001356	Peatlands Soil	MRPRVSFDDTNIWRRLQTCELVARAQGWHPNDVIAFGAEIRDAFSYEEAMAIIEREFDVIR*
Ga0070699_1004552252	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MATRPNVSFDGTNIWRRLEACELVARAHGWRPNDVIHFADEIRGAFSDEEATEFIEREFDIV*
Ga0070741_105475061	3300005529	Surface Soil	MRLKVSFDSQHIGRRLETCEVVARACGWHPNDIIHFSAEVRDAFSYEEAMAVIEREFDVVR*
Ga0070738_101617282	3300005531	Surface Soil	MATRPKVSFASENIWKRLETCELVARAHGWHPNDIVHFHDEVRDAFSYEEANAVIEREFDVV*
Ga0070735_1000277721	3300005534	Surface Soil	MTKRPKVSFDSENIWKRLEACELVARAHGWHPNDIVHFRDEVRDAFSYEEANSIIEREFDVV*
Ga0070735_101898163	3300005534	Surface Soil	MVWSILVNAVTMRPKVSFDSENIWKRLETCELVARAHGWHPNDIVHFRDEVRDAFSYEEANAIIEREFDIV*
Ga0070730_107815712	3300005537	Surface Soil	MRPKVSFDSMNIWRRLEMCKTVARAYGWKSADISSFTEEVSEAFSYEEAMAIIKRDFDISEETKDQLLGF*
Ga0070731_101386563	3300005538	Surface Soil	MRPTVQFDGTNIWQRLQSCKIVAQAYGWHPNDIIHFTEEVESAFSYEEAMAIIEREFQVAR*
Ga0070731_103916302	3300005538	Surface Soil	MRPKVSFTSKHILRRLQACQTVAEAYGWHPNDIINFSREVGAAFSYEEAMAIIEREFDTVSER*
Ga0070733_102674612	3300005541	Surface Soil	MTRPKVSFETQNIWTRLEACKSVAEAYGWHPNDIIHFSEEVQKAFTYEEAMAIIEREFDVALPTA*
Ga0070733_106304741	3300005541	Surface Soil	MRPRVSFTSPNIWTRLETCKTVAQAHGWHPNDIINLTSEIEDAFSYEEAMAI
Ga0070732_100132854	3300005542	Surface Soil	MTRPKVSFETPNIWTRLETCKSVAEAYGWHPNDIIHFTAEVQTAFTYEEAMAIIEREFDVLCQRHNRPAWA*
Ga0070732_101631492	3300005542	Surface Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDDIVRFGREVEQAFSYEDAMAVIERDFDILRKWEA*
Ga0066661_104302311	3300005554	Soil	MRPKISFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK*
Ga0070765_1001546671	3300006176	Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWRPNDIMSFAKEVRDAFTYEEAMAIVERYFDIINRTK*
Ga0066665_115515471	3300006796	Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK*
Ga0079221_107704962	3300006804	Agricultural Soil	MVMRPKVSFDSENIWKRLDICELVARAHGWHPNDIIHFRDEVRDAFSYEEANSIIAREFDVV*
Ga0075426_112485851	3300006903	Populus Rhizosphere	MRPRVSFDSRNIWRRLEVCKTVAHAYGWPPDDIIRFSREVEQAFSYEDAMAVIERDFDISKQTRV*
Ga0102924_12268321	3300007982	Iron-Sulfur Acid Spring	MRPKVSFDSDNIWRRLEACKDVARAYGWNSSEITSFVEEVREAFSYEEAMAVIKRNFDTVEKFRDRVRGVF
Ga0066710_1021596711	3300009012	Grasslands Soil	ARQVAMRPKVFFDDGHIQRRLEACVTVARAHGWHPNDIINFTREVEAAFSYEEAMAIIRREFDTVS
Ga0099829_116596271	3300009038	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAIIERNFDT
Ga0099830_105018852	3300009088	Vadose Zone Soil	MRPKVSFDDRHIQRRLEACQTVAQAHGWHPNDILAFTKEVEDAFSYEDAMAIIRREFDTSTA*
Ga0099828_116948761	3300009089	Vadose Zone Soil	MRPKVSFDDRHIQRRLEACQTVAQAHGWHPNDILAFTKEVEEAFSYEEAMAIIRREFDTSVA*
Ga0099827_104110712	3300009090	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEDAMAIIERDFDTLKK*
Ga0099827_105398572	3300009090	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWPSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK*
Ga0099827_117795081	3300009090	Vadose Zone Soil	MIGWGAMRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAVIERDFDTLKK*
Ga0099827_118589001	3300009090	Vadose Zone Soil	MRPKVSFADRHIQRRLEACQTVAQAHGWHPSDILAFTKEVEDAFSYEDAMAIIRREFDTSTA*
Ga0066709_1037561821	3300009137	Grasslands Soil	MGAMRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIRFGREVEQAFSYEDAMAVIERDFDVFKRRV*
Ga0099792_109531272	3300009143	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACEIVAKAYGWHPNAIISFTREVREAFAYEDAMAIIERDFDILKEP*
Ga0126373_100212799	3300010048	Tropical Forest Soil	MATRPKVSFDSANIWKRLETCELVARAHGWHPNDIIHFHDEVRDAFSYEEANAVIAREFDVV*
Ga0126373_105029753	3300010048	Tropical Forest Soil	MQAKLAYRPKVSFASDNIWTRLQTCKIVAQAHGWHPNDIIHFSEEVLVAFSYEEAMAVIEREFEIARRRA*
Ga0126373_130173661	3300010048	Tropical Forest Soil	MRPKVLLDSLNIERRLRACESVAQAYGWHPNDIANFASEVRSAFSYEEAMAIIEREFDVALTSA*
Ga0136449_1010808301	3300010379	Peatlands Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRPDDIVRFGREVEQAFSYEDAMAVIERDFDILRKREG*
Ga0136449_1016748211	3300010379	Peatlands Soil	MAPAMTRPRVSFDSANIWKRLQTCQTVAQAHGWHPNDIINFAAEVREAFSYEEAMNVIRREFDIVR*
Ga0134126_104431302	3300010396	Terrestrial Soil	MATRPKVSFDSTNIWRRLEACELVARAHGWRPNDVIHFADEIRGAFSDEEATEFIEREFDIV*
Ga0134126_112583982	3300010396	Terrestrial Soil	MRLKVSFDSEHIFRRLETCRVVAQAYGWHPNDIIHFTDEVRDAFSYEEAMAVIEREFDVVG*
Ga0137383_103844152	3300012199	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIRFGREVEQAFSYEDAMAVIERDFDVFKRREVEPL*
Ga0137382_103306063	3300012200	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWHPNAIISFTREVREAFAYEDAMAIIERDFDILKEP*
Ga0137363_103548681	3300012202	Vadose Zone Soil	SFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK*
Ga0137380_102996732	3300012206	Vadose Zone Soil	MIGWGAMRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIRFGREVEQAFSYEDAMAVIERDFDTLKK*
Ga0137379_115756301	3300012209	Vadose Zone Soil	MIGWGAMRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAVIERDFDVFKRREVEPL*
Ga0137378_114033902	3300012210	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAIIERNFD
Ga0137377_104449252	3300012211	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIRFGREVEQAFSYEDAMAVIERDFDTLKK*
Ga0137377_108076902	3300012211	Vadose Zone Soil	MRPKVSFDSGNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK*
Ga0137360_108925382	3300012361	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERDFDTLKK*
Ga0137361_107830102	3300012362	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWHPNAIISFTREMREAFAYEDAMAIIERDFDILKEP*
Ga0137390_111898781	3300012363	Vadose Zone Soil	DRHILRLLEACETVAQAHGWHPNDILAFTKEVEEAFSYEDAMAIIRREFDTSVA*
Ga0137395_112641681	3300012917	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAVIERDFDTLKK*
Ga0137419_103320582	3300012925	Vadose Zone Soil	MRPKVSFDSRNIWRRLETCEIVAKAYGWHPNAIISFTREVREAFAYEDAMAIIERDFDILKEP*
Ga0137416_117888211	3300012927	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNF
Ga0137407_116778481	3300012930	Vadose Zone Soil	RNIWRRLEACEIVAKAYGWHPNAIISFTREVREAFAYEDAMAIIERDFDILKEP*
Ga0182024_100025027	3300014501	Permafrost	MRPKVSFDSKNIWRRLETCKTVAQAYGWRSDEIIKFGREVEQAFSYEEAMAVIERDFDTLKK*
Ga0137418_103519962	3300015241	Vadose Zone Soil	MRPKVSFDSRNIWRRLETCEIVAKAYGWHPNAIVSFTTEVREAFAYEDAMAIIERDFDILKEP*
Ga0137403_115570762	3300015264	Vadose Zone Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWHPNAIISFTTEVREAFAYEDAMAIIERDFD
Ga0187802_100541682	3300017822	Freshwater Sediment	MAMRPKVSFDSDNIWKRLETCELVARAHGWHPNDIIQFTDEVRDAFSYEEANAIIEREFDIV
Ga0187818_100027036	3300017823	Freshwater Sediment	MRPKVSFDSRNIWRRLETCKTVAHAYGWRPDEIIRFGREVEEAFSYEDAMAVIERDFDILKKREG
Ga0187820_10564231	3300017924	Freshwater Sediment	MATRPKVSFDSTNIWRRLEACELVARAHGWHPNDIIQFTDEVRDAFSYEEANAIIEREFDIV
Ga0187824_102059381	3300017927	Freshwater Sediment	MMRPKVSFETPNIWTRLETCKSVAEAYGWHPNDIIHFTEEVQTAFTYEEAMA
Ga0187806_10730702	3300017928	Freshwater Sediment	MAMRPKVSFDSDNIWKRLETCALVARAHGWHPNDIIQFTDEVRDAFSYEEANAIIEREFDIV
Ga0187825_100089765	3300017930	Freshwater Sediment	MRPKVSFETPNIWTRLETCKSVAEAYGWHPNDIIHFTEEVQTAFTYEEAMAIIEREFDVALPAA
Ga0187803_100358922	3300017934	Freshwater Sediment	MRPKVLFDSRNIWRRLETCKTVAHAYGWRPDEIIRFGREVEEAFSYEDAMVVIERDFDILKKREG
Ga0187783_101275693	3300017970	Tropical Peatland	MRPKVSFNSDDIWKRLQTCKTVAAAHGWHPNDIVNFAEEVRQAFSYEEAMAIIEREFDTI
Ga0187781_105449222	3300017972	Tropical Peatland	VDDAAAREDALDRMTRPRVSFDSKNIWRRLEACQTVARAYGWHPNDVIAFSQEVRTAFSYEDAMAVIERRFQVIR
Ga0187780_102066301	3300017973	Tropical Peatland	MTRPRVSFDSANIWRRLQTCETVAQAHGWHPNDIINFAAEVREAFSYEEAMHVIQREFDIVR
Ga0187780_108781182	3300017973	Tropical Peatland	MRPRVTFDSENIWERLQTCELVARAHGWHPNDIINFATEVHDAFSYEEAMAIIEREFYVS
Ga0187780_113327991	3300017973	Tropical Peatland	MRPKVSFDSRHIRRRLELCRTVAQAHGWHPNDIINFTREVEEAFSYEEAMAIIRREFDIAPSNPYS
Ga0187822_102326452	3300017994	Freshwater Sediment	MATRPKVSFDSTNIWRRLEACELVARAHGWHPNDIIQFTDEVRGAFSYEEANAIIEREFDIV
Ga0187815_104916181	3300018001	Freshwater Sediment	MTVRPKVSFDSDNIWKRLETCTLVARAHGWHPNDIVHFTDEVRDAFSYEEANSIIEREFDVV
Ga0187890_107812212	3300018044	Peatland	MRLKVSFDSGNISSRLHHCQVVAQAYGWHPNDIINFSEEVRDAFSYEEAMAVIEREFDVV
Ga0187784_109188571	3300018062	Tropical Peatland	MKRPRISFDDKNIWLRLRTCTTVAQAHGWHPNDIISFTAEVQEAFTYEEAMAIIEREFDVSLV
Ga0066667_104053262	3300018433	Grasslands Soil	MRPKVSFDSRNIWRRLEACKTVAQAYGWPPDDIIRFGREVEQAFSYEDAMAVIERDFDTLKK
Ga0066667_110812192	3300018433	Grasslands Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK
Ga0193729_11988191	3300019887	Soil	MRPKVSFDSRNIWRRLETCEIVAKAYGWHPNAIISFTREVREAFAYEDAMAIIERDFDILKEP
Ga0210401_101477342	3300020583	Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWRPNDIMSFAKEVRDAFTYEEAMAIVERYFDIINRTK
Ga0213875_103875882	3300021388	Plant Roots	LEHDAAGEIIGERAMARPRVAFDSRNIWRRLETCETVARAYGWHSNDIIAFTGAVRAAFSYEDAMAIILRHFDVTG
Ga0210389_105107532	3300021404	Soil	MRPKVLLDSLNIERRLRACESVARAYGWHPNDIANFVGEVRGAFSYEEAMAIIEREFDIR
Ga0210394_100543131	3300021420	Soil	MRPKVSFDSRNIWRRLEACKTVAQAYGWRSDEIIKFGREVEQAFSYEEAMAVIERDFDTLKK
Ga0210394_109721661	3300021420	Soil	MRPKVSFDSKNIWRRLETCKTVAQAYGWRPDEIINFGKEVEEAFSYEEAMAVIERDFDTLKK
Ga0210384_101272243	3300021432	Soil	MRPKVSFDSRNIWRRLEACEIVARAYGWRPNDVMSFAKEVRDAFTYEEAMAIVERYFDIINRTK
Ga0213871_101270951	3300021441	Rhizosphere	MRPKVSFDSKNIWRRLAACTTVAQAYGWHSAEISSFSQEVETAFSYEEAMAVIEREFDVIETVPRWRAYLKMSG
Ga0210390_116065691	3300021474	Soil	MRPKVLLDSPNIERRLRACEGVARAYGWHPNDIANFASEVREAFSYEEAMAIIEREFDIR
Ga0210398_105303192	3300021477	Soil	MRPKVHFSSPDIWQRLQTCKAVAQAHGWHPNDIINFTEEVRDAFSYEEAMEIIEREFDTV
Ga0126371_100722202	3300021560	Tropical Forest Soil	MATRPKVSFDSANIWKRLETCELVARAHGWHPNDIIHFHDEVRDAFSYEEANAVIAREFDVV
Ga0126371_100994662	3300021560	Tropical Forest Soil	MATRPKVSFDSANIWKRLETCELVARAHGWHPNDIVHFHDEVRDAFSYEEANAVIEREFDVV
Ga0126371_102864783	3300021560	Tropical Forest Soil	MQAKVADRPRVSFESDNIWTRLESCKIVARAHGWHPNDIIHFSEEVLIAFSYEEAMAIIEREFEVAQPRG
Ga0242659_10368132	3300022522	Soil	MRPKVLLDSPNIERRLRACEGVARAYGWHPNDIANFASEVREAFSYEEAMAVIEREFDIR
Ga0242661_11636171	3300022717	Soil	MRPKVLLDSLNIERRLKACESVAQAYGWHPNDILNFANEVREAFSYEEAMAIIEREFDVG
Ga0209648_103500141	3300026551	Grasslands Soil	MRAKVSFDSRNIWRRLEACEIVAQAYGWRPNDIIIFTKEVREAFTYEDAMAIIERDFDILKEP
Ga0209581_10752982	3300027706	Surface Soil	MRPKVSFDSPNIWRRLETCELVARAHGWHPNDIVHFVDEVRSAFSYEEANEIIEREFDVV
Ga0209178_11729822	3300027725	Agricultural Soil	RCIGIDVMVMRPKVSFDSENIWKRLDICELVARAHGWHPNDIIHFRDEVRDAFSYEEANSIIAREFDVV
Ga0209580_100074806	3300027842	Surface Soil	MTRPKVSFETPNIWTRLETCKSVAEAYGWHPNDIIHFTAEVQTAFTYEEAMAIIEREFDVLCQRHNRPAWA
Ga0209580_101939861	3300027842	Surface Soil	LILWGAMRPKVSFDSRNIWRRLEVCKTVAQAYGWRSDDIVRFGREVEQAFSYEDAMAVIERDFDILRKWEA
Ga0209580_103205911	3300027842	Surface Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWCPDDIIRLAREVEQAFSYEDAMAVIERDFDILRKREA
Ga0209167_103338101	3300027867	Surface Soil	MTRPKVSFETQNIWTRLEACKSVAEAYGWHPNDIIHFSEEVQKAFTYEEAMAIIEREFDVALPTA
Ga0209579_100751093	3300027869	Surface Soil	MRPTVQFDGTNIWQRLQSCKIVAQAYGWHPNDIIHFTEEVESAFSYEEAMAIIEREFQVA
Ga0209579_102630252	3300027869	Surface Soil	MRPKVSFTSKHILRRLQACQTVAEAYGWHPNDIINFSREVGAAFSYEEAMAIIEREFDTVSER
Ga0209590_100967431	3300027882	Vadose Zone Soil	KVSFDSRNIWRRLEVCKTVAQAYGWRSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK
Ga0209590_104355642	3300027882	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWPSDEISNFGKEVEQAFSYEEAMAVIERNFDTLKK
Ga0209415_1000142239	3300027905	Peatlands Soil	MRPRVSFDDTNIWRRLQTCELVARAQGWHPNDVIAFGAEIRDAFSYEEAMAIIEREFDVI
Ga0209415_100275272	3300027905	Peatlands Soil	MRPKVSFDDPHIRRRLEMCQIVARAHGWHPNDIVAFSNEVEAAFSYEEAMAIIYREFDTTAS
Ga0209061_10971261	3300027968	Surface Soil	SIRSGEAMRRLKVSFDSMHIDRRLETCQMVARASGWHPNDIIAFTDEVRDAFSYEEAMAVIERAFDVVR
Ga0209168_100172972	3300027986	Surface Soil	MTKRPKVSFDSENIWKRLEACELVARAHGWHPNDIVHFRDEVRDAFSYEEANSIIEREFDVV
Ga0209168_102713283	3300027986	Surface Soil	MVWSILVNAVTMRPKVSFDSENIWKRLETCELVARAHGWHPNDIVHFRDEVRDAFSYEEANAIIEREFDIV
Ga0209526_100372794	3300028047	Forest Soil	MRVTMRPKVSFDSRNIWRRLETCEIVARAHGWHPNAIISFTREVRAAFAYEDAMAIIEREFDILK
Ga0137415_108776991	3300028536	Vadose Zone Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWPPDDIIKFGREVEQAFSYEDAMAVIERNFDTLKK
Ga0308309_101240123	3300028906	Soil	MRVAMRPKVSFDSRNIWRRLETCEIVAQAHGWHPNAIISFTREVRAAFAYEDAMAIIEREFDILK
Ga0222749_106452461	3300029636	Soil	LVQVTMRPKVSFDSRNIWRRLEACEIVARAYGWRPNDIMSFAKEVRDAFTYEEAMAIVERYFDIINRTK
Ga0307921_10300682	3300030712	Soil	MRPKVSFDSRHIGRRLHACQTVAQAYGWHPNDIISFTTEVEQAFSYEEAMAIIEREFDLIRDRGS
Ga0265460_117171261	3300030740	Soil	RNGGRRMRPKVLLDSPNIERRLRACEGVARAYGWHPNDIANFASEVREAFSYEEAMAIIEREFDIR
Ga0265461_120064791	3300030743	Soil	LSRDIRNGGRRMRPKVLLDSPNIERRLRACEGVARAYGWHPNDIANFANEVREAFSYEEAMAVIEREFDIR
Ga0307374_100084545	3300031670	Soil	MQSTVMMRPRVSFESPNIWQRLETCEMIARAQGWHPNDIINFTEEVREAFSYEEAMAIIAREFDIL
Ga0307374_100180443	3300031670	Soil	MRPKVSFDSRHIGRRLHACQTVAQAYGWHPNDIISFTTEVEQAFSYEEAMAIIEREFDTIRDRES
Ga0307374_100281858	3300031670	Soil	MQSTVMMRPRVSFDSPNIWQRLETCEMIARAQGWHPNDIIHFTEEVRDAFSYEEAMAIIAREFDIL
Ga0307374_101499981	3300031670	Soil	MRPTVSFESSNIWRRLQSCEIVAHAHGWHPNDIINFVQEVEEAFSYEEAMAVIEREFNVA
Ga0310686_1088217183	3300031708	Soil	MRRPRISFNDDNIWMRLRTCATVAQAHGWHPNDIISFTTEVQEAFTYEEAMAIIEREFDISHV
Ga0310686_1093688482	3300031708	Soil	MRLRVSFDSQNICKRLDTCRIVAQAYGWHPNDIINFSDEVRDAFSYEEAMAVIEREFDVV
Ga0310686_1093898001	3300031708	Soil	DIWKRLQSCQTVAQAHGWHPNDIITFAAEVRDAFSYEEAMAVIEREFDTHH
Ga0310686_1133258291	3300031708	Soil	NIWRRLEVCKTVAQAYGWRPDDIIRFGREVEQAFSYEDAMAVIERDFDILRKREA
Ga0307477_110139002	3300031753	Hardwood Forest Soil	VRPKVSFDSKNIWRRLETCKTVAQAYGWRSDEIIRFGREVEQAFSYEDAMAVIERDFDVLKRPG
Ga0311301_119432631	3300032160	Peatlands Soil	MRPKVSFDSRNIWRRLEVCKTVAQAYGWRPDDIVRFGREVEQAFSYEDAMAVIERDFDILRKREG
Ga0335085_100823515	3300032770	Soil	MRLKVSFDSSNIYRRLDTCKIVAQAYGWHPNDIIHFIEEVRQAFSYEEAMAVIEREFDIV
Ga0335085_113727942	3300032770	Soil	SPLLIYFSRESAVRPKVFFDSMNIWKRLEACETVAQAHGWHPNDIIHFAEEVREAFSYEEAMAIIEREFEPTS
Ga0335079_1000030839	3300032783	Soil	MTRPKVSFDSANIWRRLETCQTVAQAHGWHPNDIINFAAEVREAFSYEEAMTVIQREFDIVR
Ga0335078_101617014	3300032805	Soil	MAPVMNRPRVSFDSANIWRRLQTCQTVAQAHGWHPNDIINFAAEVREAFSYEEAMNIIRREFDVVR
Ga0335078_103746443	3300032805	Soil	MRPRVAFDGTNIWKQLEACQTVARAHGWHPNDIINFTEEVQTAFTYEEALDVIAREFDVVWSSADE
Ga0335081_103357644	3300032892	Soil	MRPKVSFDSRHIRRRLELCRTVAQAHGWHPNDIINFTREVEEAFSYEEAMAIIRREFDIAPSNPFS
Ga0335081_116706772	3300032892	Soil	MRPKVSFDSKHIGRRIEICQIVARAHGWGSREIAAFTQEVTRAFSYEEAMEIIDREFDTILVRFGP
Ga0335081_121954041	3300032892	Soil	MRPRVSFRSRNIWDRLRSCELVARAHRWHPNDILHFRQEVSSAFSWEEAMAVVEREFD
Ga0335074_102507882	3300032895	Soil	MRPKISFSSRDIWKRLETCKTVAAAHGWHPNDIINFAEEVREAFSYEEAMAIIDREFDTV
Ga0335074_103985392	3300032895	Soil	MAPVTMRPRVSFDSANIWKRLQTCQTVAQAHGWHPNDIISFSAEVREAFSYEEAMNIIRR
Ga0335074_105749362	3300032895	Soil	MAPVMMRPRVSFDSANIWKRLQTCQTVAQAHGWHPNDIISFSAEVREAFSYEEAMNIIRREFDVVR
Ga0335074_113918411	3300032895	Soil	MRPKVSFHSKNIWDRLQACTAVAQAHGWHPNDIITFSDEVREAFSYEEAMAIIEREFEFT
Ga0335074_115453762	3300032895	Soil	MRPKVHFSSPDIWRRLQTCKTVAEAHGWHPNDIIIFAEEVRDAFSYEEAMEIIEREFETI
Ga0335073_113858882	3300033134	Soil	MAPVTMRPRVSFDSANIWKRLQTCQTVAQAHGWHPNDIISFSAEVREAFSYEEAMNIIRREFDVVR
Ga0335077_103670271	3300033158	Soil	MRPRVSFRSRNIWDRLRRCELVARAHRWHPNDILHFRQEVSSAFSWEEAMAVVEREFDVV
Ga0335077_115200832	3300033158	Soil	AVMTRPKVAFDSANIWRRLQTCQTVAQAHGWHPNDIINFAAEVREAFSYEEAMSIIQREFDVVR
Ga0316628_1034739301	3300033513	Soil	MRLKVSFDSPNIYRRLDTCKIVAQAYGWHPNDIVNFSEEVREAFSYEEAMAVIKREFDIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055888

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences