Metagenome / Metatranscriptome Family F055882

Overview

Basic Information

• Family ID: F055882
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 138
• Average Sequence Length: 40 residues
• Representative Sequence: KDANKPSLRRTSTSTDKSGDNKSDDDRPTLKRRDDSN
• Number of Associated Samples: 123
• Number of Associated Scaffolds: 138

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 88.41 %
• Associated GOLD sequencing projects: 116
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (73.913 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.594 % of family members)
• Environment Ontology (ENVO): Unclassified (23.913 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (39.855 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00285	Citrate_synt	22.46
PF07244	POTRA	4.35
PF13490	zf-HC2	3.62
PF08281	Sigma70_r4_2	2.90
PF03466	LysR_substrate	2.17
PF00072	Response_reg	1.45
PF00535	Glycos_transf_2	1.45
PF01061	ABC2_membrane	1.45
PF05649	Peptidase_M13_N	1.45
PF13188	PAS_8	1.45
PF13185	GAF_2	1.45
PF01752	Peptidase_M9	0.72
PF13492	GAF_3	0.72
PF00171	Aldedh	0.72
PF00291	PALP	0.72
PF07690	MFS_1	0.72
PF13340	DUF4096	0.72
PF05163	DinB	0.72
PF13620	CarboxypepD_reg	0.72
PF00732	GMC_oxred_N	0.72
PF03703	bPH_2	0.72
PF00582	Usp	0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0372	Citrate synthase	Energy production and conversion [C]	22.46
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.72
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.72

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.91 %
Unclassified	root	N/A	26.09 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.91 %
Unclassified	root	N/A	26.09 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.91 %
Unclassified	root	N/A	26.09 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.28 %
Unclassified	root	N/A	26.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.09 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.09 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.52 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.07 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000893|AP72_2010_repI_A001DRAFT_1005836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2331
3300002245|JGIcombinedJ26739_100239498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1704
3300002245|JGIcombinedJ26739_100463810	All Organisms → cellular organisms → Bacteria	1144
3300004092|Ga0062389_102412037	Not Available	696
3300004092|Ga0062389_104219829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540
3300005167|Ga0066672_10191831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299
3300005295|Ga0065707_10242613	All Organisms → cellular organisms → Bacteria	1151
3300005445|Ga0070708_100583241	All Organisms → cellular organisms → Bacteria	1054
3300005468|Ga0070707_100301580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1557
3300005540|Ga0066697_10302120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	941
3300005602|Ga0070762_11084040	All Organisms → cellular organisms → Bacteria → Acidobacteria	551
3300005618|Ga0068864_100966127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844
3300005841|Ga0068863_100225594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1806
3300005844|Ga0068862_102362648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	543
3300006059|Ga0075017_100059052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2594
3300006086|Ga0075019_10999773	Not Available	540
3300006162|Ga0075030_100196390	All Organisms → cellular organisms → Bacteria	1625
3300006162|Ga0075030_100536163	Not Available	930
3300006176|Ga0070765_100615396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1024
3300006796|Ga0066665_11354027	All Organisms → cellular organisms → Bacteria → Acidobacteria	549
3300009038|Ga0099829_11004652	Not Available	692
3300009101|Ga0105247_10218154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290
3300009174|Ga0105241_10049159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3211
3300009518|Ga0116128_1088993	Not Available	922
3300009521|Ga0116222_1458840	Not Available	556
3300009616|Ga0116111_1040711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1407
3300009632|Ga0116102_1026257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1972
3300009637|Ga0116118_1012043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3363
3300009698|Ga0116216_10928895	All Organisms → cellular organisms → Bacteria	520
3300009709|Ga0116227_10694640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769
3300009759|Ga0116101_1032233	All Organisms → cellular organisms → Bacteria	1075
3300009764|Ga0116134_1055447	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504
3300009824|Ga0116219_10514085	All Organisms → cellular organisms → Bacteria → Acidobacteria	662
3300010048|Ga0126373_12910335	Not Available	534
3300010358|Ga0126370_12519598	Not Available	513
3300010373|Ga0134128_10138498	All Organisms → cellular organisms → Bacteria → Acidobacteria	2754
3300010376|Ga0126381_101541871	All Organisms → cellular organisms → Bacteria	960
3300010376|Ga0126381_103331345	All Organisms → cellular organisms → Bacteria	633
3300010376|Ga0126381_104090526	All Organisms → cellular organisms → Bacteria → Acidobacteria	567
3300010379|Ga0136449_101070220	Not Available	1288
3300011080|Ga0138568_1024680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623
3300011269|Ga0137392_10409032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1126
3300011271|Ga0137393_10103354	All Organisms → cellular organisms → Bacteria	2329
3300011271|Ga0137393_10237795	All Organisms → cellular organisms → Bacteria	1544
3300012199|Ga0137383_11083562	All Organisms → cellular organisms → Bacteria → Acidobacteria	581
3300012207|Ga0137381_11324561	All Organisms → cellular organisms → Bacteria → Acidobacteria	613
3300012362|Ga0137361_11267027	All Organisms → cellular organisms → Bacteria → Acidobacteria	661
3300012363|Ga0137390_10420768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1313
3300012363|Ga0137390_11305634	All Organisms → cellular organisms → Bacteria → Acidobacteria	671
3300012519|Ga0157352_1014711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	879
3300012917|Ga0137395_10523373	All Organisms → cellular organisms → Bacteria → Acidobacteria	855
3300012971|Ga0126369_12669170	All Organisms → cellular organisms → Bacteria	584
3300013100|Ga0157373_10427362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	951
3300013105|Ga0157369_10905999	All Organisms → cellular organisms → Bacteria	904
3300013297|Ga0157378_10506055	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207
3300014325|Ga0163163_11273254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798
3300014489|Ga0182018_10296714	Not Available	880
3300014492|Ga0182013_10092811	All Organisms → cellular organisms → Bacteria → Acidobacteria	2068
3300014838|Ga0182030_10609960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1050
3300016294|Ga0182041_11276589	Not Available	671
3300016445|Ga0182038_11843426	Not Available	546
3300016750|Ga0181505_10525170	All Organisms → cellular organisms → Bacteria	593
3300017822|Ga0187802_10137077	All Organisms → cellular organisms → Bacteria	932
3300017822|Ga0187802_10332139	All Organisms → cellular organisms → Bacteria → Acidobacteria	595
3300017933|Ga0187801_10322195	All Organisms → cellular organisms → Bacteria	632
3300017933|Ga0187801_10353936	Not Available	604
3300017943|Ga0187819_10114084	All Organisms → cellular organisms → Bacteria	1613
3300017946|Ga0187879_10668560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578
3300017948|Ga0187847_10043664	All Organisms → cellular organisms → Bacteria → Acidobacteria	2594
3300017970|Ga0187783_11087673	Not Available	576
3300017972|Ga0187781_10625711	Not Available	776
3300017973|Ga0187780_10956140	Not Available	623
3300017975|Ga0187782_10344844	Not Available	1127
3300017988|Ga0181520_10650427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	726
3300017995|Ga0187816_10064510	Not Available	1545
3300018004|Ga0187865_1320670	All Organisms → cellular organisms → Bacteria → Acidobacteria	509
3300018023|Ga0187889_10046951	All Organisms → cellular organisms → Bacteria → Acidobacteria	2333
3300018042|Ga0187871_10632758	All Organisms → cellular organisms → Bacteria	594
3300018058|Ga0187766_10376817	All Organisms → cellular organisms → Bacteria	934
3300018062|Ga0187784_11531902	All Organisms → cellular organisms → Bacteria → Acidobacteria	528
3300018085|Ga0187772_10380671	All Organisms → cellular organisms → Bacteria	979
3300018090|Ga0187770_11096300	All Organisms → cellular organisms → Bacteria	642
3300018468|Ga0066662_10096853	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075
3300019240|Ga0181510_1264943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603
3300019888|Ga0193751_1074472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375
3300021088|Ga0210404_10115945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1371
3300021170|Ga0210400_10394993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140
3300021171|Ga0210405_11295472	All Organisms → cellular organisms → Bacteria → Acidobacteria	535
3300021181|Ga0210388_10537137	All Organisms → cellular organisms → Bacteria	1025
3300021478|Ga0210402_10756176	All Organisms → cellular organisms → Bacteria → Acidobacteria	896
3300021559|Ga0210409_11260525	All Organisms → cellular organisms → Bacteria → Acidobacteria	615
3300025500|Ga0208686_1036937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189
3300025906|Ga0207699_11488409	Not Available	501
3300025914|Ga0207671_10636347	All Organisms → cellular organisms → Bacteria	850
3300025922|Ga0207646_11749718	All Organisms → cellular organisms → Bacteria → Acidobacteria	533
3300025935|Ga0207709_10676066	All Organisms → cellular organisms → Bacteria	824
3300025972|Ga0207668_10399958	All Organisms → cellular organisms → Bacteria	1161
3300026078|Ga0207702_10971770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	842
3300027652|Ga0209007_1021866	Not Available	1651
3300027655|Ga0209388_1218316	Not Available	524
3300027846|Ga0209180_10051983	All Organisms → cellular organisms → Bacteria	2262
3300027846|Ga0209180_10217022	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102
3300027862|Ga0209701_10059119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2445
3300027875|Ga0209283_10251004	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173
3300027895|Ga0209624_10291109	All Organisms → cellular organisms → Bacteria	1087
3300027903|Ga0209488_11237095	Not Available	501
3300027908|Ga0209006_10106998	All Organisms → cellular organisms → Bacteria → Acidobacteria	2476
3300027908|Ga0209006_10372603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207
3300027911|Ga0209698_10678633	Not Available	786
3300028759|Ga0302224_10118261	Not Available	1027
3300028871|Ga0302230_10215060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745
3300029943|Ga0311340_10370521	Not Available	1329
3300030617|Ga0311356_10467894	Not Available	1236
3300030646|Ga0302316_10294017	All Organisms → cellular organisms → Bacteria → Acidobacteria	657
3300030659|Ga0316363_10389425	All Organisms → cellular organisms → Bacteria → Acidobacteria	543
3300030707|Ga0310038_10214138	All Organisms → cellular organisms → Bacteria	912
3300030906|Ga0302314_10887068	Not Available	878
3300031057|Ga0170834_104609478	All Organisms → cellular organisms → Bacteria	1954
3300031474|Ga0170818_108214814	All Organisms → cellular organisms → Bacteria	555
3300031544|Ga0318534_10487361	Not Available	705
3300031708|Ga0310686_100215654	Not Available	1491
3300031938|Ga0308175_100491251	Not Available	1303
3300031942|Ga0310916_10702202	Not Available	856
3300031954|Ga0306926_10188838	All Organisms → cellular organisms → Bacteria	2557
3300031962|Ga0307479_11260097	All Organisms → cellular organisms → Bacteria	701
3300031962|Ga0307479_11678202	Not Available	589
3300031962|Ga0307479_11694941	Not Available	586
3300032160|Ga0311301_10045714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10278
3300032160|Ga0311301_11282036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928
3300032174|Ga0307470_10501952	All Organisms → cellular organisms → Bacteria	885
3300032180|Ga0307471_102780553	All Organisms → cellular organisms → Bacteria → Acidobacteria	621
3300032180|Ga0307471_104202363	Not Available	508
3300032205|Ga0307472_101929906	All Organisms → cellular organisms → Bacteria → Acidobacteria	590
3300032805|Ga0335078_10184362	All Organisms → cellular organisms → Bacteria	2917
3300032893|Ga0335069_12178303	All Organisms → cellular organisms → Bacteria → Acidobacteria	580
3300033807|Ga0314866_056239	Not Available	652
3300033822|Ga0334828_039847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343
3300033982|Ga0371487_0507973	Not Available	506

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.86%
Host-Associated	Host-Associated	10.14%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.57%
Aquatic	Environmental → Aquatic	20.29%
Plants	Host-Associated → Plants	10.14%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.77%
Freshwater	Environmental → Aquatic → Freshwater	16.67%
Peat	Environmental → Terrestrial → Peat	5.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.80%
Sediment	Environmental → Aquatic → Sediment	3.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.90%
Roots	Host-Associated → Plants → Roots	0.72%
Peat Moss	Host-Associated → Plants → Peat Moss	0.72%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Loam	Environmental → Terrestrial → Soil → Loam	8.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.72%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.72%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.07%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.45%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.72%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300011080	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental
3300029943	I_Palsa_N3 coassembly	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A001DRAFT_10058361	3300000893	Forest Soil	DSNKPSLRRTANPSDKTDEKKSDDDDRPTLKRRDDSN*
JGIcombinedJ26739_1002394981	3300002245	Forest Soil	DGSKPSLRRTSASSDSKNGDSKSDSDDDRPTLKRRDDSSN*
JGIcombinedJ26739_1004638101	3300002245	Forest Soil	KDANKPSLRRTSTSSSDGNGNANGQSDDDRPTLKRRDDSSSN*
Ga0062389_1024120371	3300004092	Bog Forest Soil	KDVNKPTLRRTSSADQSGKDAGSTDDGHPTLKRRDDTSN*
Ga0062389_1042198291	3300004092	Bog Forest Soil	RKMVDHKDAGKPSLRRASSTDKNGTDDKTSDDDHPTLKRRDDSSSN*
Ga0066672_101918311	3300005167	Soil	GSRPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ*
Ga0065707_102426131	3300005295	Switchgrass Rhizosphere	KESGKPSLRRTTTSDKTGSDKDGKDKDDDRPTLKRREDQ*
Ga0070708_1005832411	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EKDSNKPSLRRTANPTDKSSDSKSDDDRPTLKRRDDSSN*
Ga0070707_1003015801	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RHKVIEEKDGSRPSLRRTSSTDKTSSGSDKSDDDRPTLKRREDKPDQN*
Ga0066697_103021203	3300005540	Soil	ESGKPSLRRTASKDKTTSDKSADDDRPTLKRRDDQNQN*
Ga0070762_110840401	3300005602	Soil	KDGKKPSLRRTSTADKSGSDPNSTDDGRPTLKRRDDSN*
Ga0068864_1009661273	3300005618	Switchgrass Rhizosphere	LDKNEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0068863_1002255941	3300005841	Switchgrass Rhizosphere	EKDTNKPSLRRTSSTDKSGKDTKSGDDDRPTLKRREDQN*
Ga0068862_1023626481	3300005844	Switchgrass Rhizosphere	KEDSNKPSLRRTSSTDKNGTDDEGNDDDRPTLKRRDDSN*
Ga0075017_1000590525	3300006059	Watersheds	HKILDKKDDGKKPSLRRTSTTDKNGSDSKGNDDDRPTLKRRDDSSN*
Ga0075019_109997732	3300006086	Watersheds	RPSLRRTANPSDTTKDDSKQDDDRPTLKRRDDSSN*
Ga0075030_1001963903	3300006162	Watersheds	DEKDSSKPSLRRTSNSSDKSEDGKKDDDDRPTLKRRDDSN*
Ga0075030_1005361631	3300006162	Watersheds	TKPSLRRTSNSTDKTGDTKSDDDRPTLKRRDDSSN*
Ga0070765_1006153961	3300006176	Soil	KVIEEKDGSKPSLRRTSTTDKTGGTNTNSDDDRPTLKRRDDDSGQNNPSPTNPSQN*
Ga0066665_113540271	3300006796	Soil	NKPSLRRTSSPDKSGKDTKNDDDRPTLKRRPDSQDQ*
Ga0099829_110046521	3300009038	Vadose Zone Soil	RPSLRRTSSSDKTSTGSDKSDDDRPTLKRRDDKPDQN*
Ga0105247_102181541	3300009101	Switchgrass Rhizosphere	DKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0105241_100491591	3300009174	Corn Rhizosphere	QEKKEDPNKPSLRRTSSADKSGKDDKGNDDDRPTLKRRDDNN*
Ga0116128_10889933	3300009518	Peatland	GNKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQNQQ*
Ga0116222_14588401	3300009521	Peatlands Soil	IDQKDSSKPSLRRTSNPSDTSNDGKSDDDRPTLKRRDDSSN*
Ga0116111_10407111	3300009616	Peatland	EKDGSKPSLRRTSTSDKSAGTDKSGSDDDRPTLKRRDDSQNQNQQ*
Ga0116102_10262573	3300009632	Peatland	EKDGSKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQN*
Ga0116118_10120431	3300009637	Peatland	KIIEEKDGSKPSLRRTSTSDKTSSTDKSGDDDRPTLKRRDDNPNQN*
Ga0116216_109288951	3300009698	Peatlands Soil	DKDSSKPSLRRTSNPSDKSGDTKSDDDRPTLKRRDDSSN*
Ga0116227_106946401	3300009709	Host-Associated	DSNRPSLRRASTADKSGSDKSGNSDDDRPTLKRRDDTPDQTQQQ*
Ga0116101_10322331	3300009759	Peatland	KPSLRRTSTSGSDKTGDSTNDDDRPTLKRRDDSSSN*
Ga0116134_10554471	3300009764	Peatland	NKPSLRRTSAGSDGDTGNGQSDDDRPTLKRRDGSSD*
Ga0116219_105140851	3300009824	Peatlands Soil	PSLRRASSTDKNGTDDKSSDDDRPTLKRRDDGSN*
Ga0126373_129103351	3300010048	Tropical Forest Soil	VVDEKDNNKPSLRRTSSADKSGKDTSNGDDRPTLKRRGDQQ*
Ga0126370_125195981	3300010358	Tropical Forest Soil	PSLRRASTNDKSGKGGDDKSADDDRPTLKRREDKQD*
Ga0134128_101384981	3300010373	Terrestrial Soil	NEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0126381_1015418711	3300010376	Tropical Forest Soil	KPSLRRTSNTSDKSSDGKNDDDRPTLKRRDDSNDSN*
Ga0126381_1033313452	3300010376	Tropical Forest Soil	LLDKNDANKPSLRRTTNTSDKTDDKKDDEHPTLKRRDDSN*
Ga0126381_1040905261	3300010376	Tropical Forest Soil	ILDQKDSNRPSLRRTANPSDTTKDDKDKQDDDRPTLKRRDDSPN*
Ga0136449_1010702202	3300010379	Peatlands Soil	ANKPSLRRTANSGDNTGDQKSDDDRPTLKRRDDSSN*
Ga0138568_10246801	3300011080	Peatlands Soil	IEEKDGSKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQN*
Ga0137392_104090324	3300011269	Vadose Zone Soil	EGGKPSLRRTSSADKSGKDDKDKDDDRPTLKRRDDSNNN*
Ga0137393_101033541	3300011271	Vadose Zone Soil	NKPSLRRTSTTTDDKTGDSKDDDRPTLKRRDDSSN*
Ga0137393_102377952	3300011271	Vadose Zone Soil	TNKASLRRTSAGDKHGQDTKDDDDRPTLKRRDDEN*
Ga0137383_110835621	3300012199	Vadose Zone Soil	KVVDEKESGKPSLRRTASKDKTTSDKGADDDRPTLKRRDDQNQN*
Ga0137381_113245612	3300012207	Vadose Zone Soil	SKPSLRRTSTTDKSSDKNGDKGGDDDRPTLHRRDD*
Ga0137361_112670272	3300012362	Vadose Zone Soil	TKPSLRRTSSSDKSGKDDKTDDDRPTLKRRDDTKQN*
Ga0137390_104207683	3300012363	Vadose Zone Soil	GSRPSLRRTSSTDKSTGTDKSDDERPTLKRRADKPDKN*
Ga0137390_113056341	3300012363	Vadose Zone Soil	SLRRTSTPDKNGSDDKTGDDGRPTLKRRDDSSSN*
Ga0157352_10147113	3300012519	Unplanted Soil	GTKPSLRRTSTADKTSDKNGDKGGDDDRPTLHRRDD*
Ga0137395_105233733	3300012917	Vadose Zone Soil	DANKPSLRRTSTTTDDKTGDSKDDDRPTLKRRDDSSN*
Ga0126369_126691701	3300012971	Tropical Forest Soil	EKDSNKPSLRRTSNTSDKSDEKKSDDDDRPTLKRRDDSN*
Ga0157373_104273621	3300013100	Corn Rhizosphere	KNEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0157369_109059991	3300013105	Corn Rhizosphere	LDEKDANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDD*
Ga0157378_105060552	3300013297	Miscanthus Rhizosphere	EYRLMIVHENDTNKQSLRRTSSTDKSGKDTKSGDYDRPTLKRREDQN*
Ga0163163_112732541	3300014325	Switchgrass Rhizosphere	KPSLRRTTTSDKTGSDKDGKDKDDDRPTLKRREDQ*
Ga0182018_102967141	3300014489	Palsa	DGSKPSLRRTSTSDKTGTSGTDSSDDDRPTLKRRDDSPDQTQQQQQ*
Ga0182013_100928111	3300014492	Bog	HKVIEEKDSSKPSLRRTSTSDKTSGTDKSGDDDRPTLKRRDDSPSQN*
Ga0182030_106099603	3300014838	Bog	SLRRATSSQGDSTNPDDNTKSADDRPTLKRRDDQ*
Ga0182041_112765891	3300016294	Soil	KDSAKPSLRRTSNTTDKSDDKKDDDDRPTLKRREDSN
Ga0182038_118434262	3300016445	Soil	DSAKPSLRRTSNPGDKSDDKKDDDDRPTLKRRDDSN
Ga0181505_105251701	3300016750	Peatland	IDQKDSNKPSLRRTSNTSDTSSDGKSDDDRPTLKRRDDSSN
Ga0187802_101370772	3300017822	Freshwater Sediment	RDENKPSLRRTSAPSDDKTSDGKTDDDRPTLKRRDDSSN
Ga0187802_103321392	3300017822	Freshwater Sediment	KKPSLRRASTTDKNGSDDKGTSSDDDHPTLKRRDDSNNN
Ga0187801_103221951	3300017933	Freshwater Sediment	LDQKDSSKPSLRRTSNPSNKSEDGKTSDDDRPTLKRRDDTN
Ga0187801_103539361	3300017933	Freshwater Sediment	NKPSLRRTSNPTDSTGDSTKSDDDRPTLKRRDDSSN
Ga0187819_101140844	3300017943	Freshwater Sediment	NKPTLRRTSSADQSGKDQGNTDDGHPTLKRRDDSNNN
Ga0187879_106685602	3300017946	Peatland	DGNKPSLRRTSTSDKTSGTDSSSNDDDRPTLKRRDDNPNQTQQQ
Ga0187847_100436641	3300017948	Peatland	QRDENKPSLRRTSTSSGDDKSGTNGDDDRPTLKRRDDSSN
Ga0187783_110876732	3300017970	Tropical Peatland	DENKPSLRRTASSGGDNGSGSSNDDDRPTLKRRDDSSNN
Ga0187781_106257113	3300017972	Tropical Peatland	KPSLRRTSNTSDKSSDGKNDDDRPTLKRRDDSNDSN
Ga0187780_109561402	3300017973	Tropical Peatland	DQKEGNKPTLRRASSADKSGKDQGSTDDEHPTLKRRDDNN
Ga0187782_103448441	3300017975	Tropical Peatland	NKPSLRRTSNPNDNSGDSKQDDDRPTLKRRDDSSN
Ga0181520_106504271	3300017988	Bog	KDSAPSLRRTSKPADKSTSGDSKNDDDRPTLKRRDD
Ga0187816_100645101	3300017995	Freshwater Sediment	LDQRDENKPSLRRTSAPSDDKTSDGKTDDDRPTLKRRDDSSN
Ga0187865_13206701	3300018004	Peatland	LDQRDENKPSLRRTSASGDSKSGTTNPDDDRPTLKRRDDSSN
Ga0187889_100469511	3300018023	Peatland	KDGNKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQNQQ
Ga0187871_106327581	3300018042	Peatland	HKVIDEKDSNKPSLRRTSNPSDSSGDGKTDDDRPTLKRRPSDDQ
Ga0187766_103768171	3300018058	Tropical Peatland	EKDANKPSLRRTSNPNDKTGTDQGNKDDDRPTLKRRDDSSN
Ga0187784_115319021	3300018062	Tropical Peatland	LDQKDSNKPSLRRTSNPNDNSGDQKQDDDRPTLKRRDDSSN
Ga0187772_103806711	3300018085	Tropical Peatland	NKPSLRRTSNPNDNSGDQKQDDDRPTLKRRDDSSN
Ga0187770_110963001	3300018090	Tropical Peatland	NKPSLRRTSTSSGDNTGNSQGDDDRPTLKRRDDSSN
Ga0066662_100968532	3300018468	Grasslands Soil	KKGNKPSLRRTSSPDKSGKDTKNDDDRPTLKRRPDSQDQ
Ga0181510_12649431	3300019240	Peatland	HKVNDEKDASRPSLRRASNTDKTGGGTDSSSDDDRPTLKRRDDSPDQTTQQQQ
Ga0193751_10744723	3300019888	Soil	RPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ
Ga0210404_101159451	3300021088	Soil	KDANKPSLRRTSTSTDKSGDNKSDDDRPTLKRRDDSN
Ga0210400_103949931	3300021170	Soil	IDNKDTGKPSLRRTSSTSNTGKDGTSSDDDKPTLKRRDDSN
Ga0210405_112954721	3300021171	Soil	GNKPSLRRTSTADKSGDKNGDKGGDDDRPTLHRRDD
Ga0210388_105371372	3300021181	Soil	DEKDANKPSLRRTSNTSDKSSDGKSDDDRPTLKRRDDSSN
Ga0210402_107561761	3300021478	Soil	KGGTKPSLRRTSTADKPSDKNGDKGGDDDRPTLHRRDD
Ga0210409_112605252	3300021559	Soil	KPSLRRTASTDKSGDKNGDKTDDDRPTLHRRDDFK
Ga0208686_10369373	3300025500	Peatland	ANKPSLRRTSAGSDGDTGNGQSDDDRPTLKRRDGSSD
Ga0207699_114884091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	KIQEKKEDPNKPSLRRTSSADKSGKDDKGNDDDRPTLKRRDDNN
Ga0207671_106363472	3300025914	Corn Rhizosphere	DANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDDSN
Ga0207646_117497182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	KESGKPSLRRTSSADKTNGKDDKDKDDDRPTLKRRDDSNNN
Ga0207709_106760661	3300025935	Miscanthus Rhizosphere	DNNKPSLRRTTTSDKTSTDKDGKDKDDDRPTLKRREDQN
Ga0207668_103999582	3300025972	Switchgrass Rhizosphere	PSLRRTTTSDKTSTDKDGKDKDDDRPTLKRREDQN
Ga0207702_109717703	3300026078	Corn Rhizosphere	KNRPSLRRTSTPDKNGSDDKTGNDDDRPTLKRRDDSSSN
Ga0209007_10218662	3300027652	Forest Soil	DQKDANKPSLRRTSAGSDGNTGNGQTDDDRPTLKRRDDSSSN
Ga0209388_12183162	3300027655	Vadose Zone Soil	EKDGSRPSLRRTSSSDKTSTGSDKSDDDRPTLKRREDKPDQN
Ga0209180_100519831	3300027846	Vadose Zone Soil	VREEKDGSRPSLRRTSSTDKSTGTDKSDDERPTLKRRDDKPDQN
Ga0209180_102170223	3300027846	Vadose Zone Soil	RHKVIEEKDGSRPSLRRTSSSDKTSSGSDKSDDDRPTLKRREDKPDQN
Ga0209701_100591191	3300027862	Vadose Zone Soil	ILDKKDDGKKPSLRRTSTPDKNGSDSKGNDDDRPTLKRRDDSSN
Ga0209283_102510041	3300027875	Vadose Zone Soil	IENRHKVLEEKDGSRPSLRRTSSTDKSTGTDKSDDERPTLKRRDDKPDQN
Ga0209624_102911091	3300027895	Forest Soil	PSLRRTSAGSSDGNNGSGQTDDDRPTLKRREDSSN
Ga0209488_112370951	3300027903	Vadose Zone Soil	KVIEEKDGSRPSLRRTSSTDKSSTGSDKSDDDRPTLKRREDKPDQN
Ga0209006_101069982	3300027908	Forest Soil	WTPLDEKDGNKPSLRRTSNSSDTSDKSDTKSDDDRPTLKRRDDSN
Ga0209006_103726031	3300027908	Forest Soil	SNKPSLRRTSNTSDTSSTDKKDDDRPTLKRRDDSSSN
Ga0209698_106786332	3300027911	Watersheds	TKPSLRRTSNSTDKTGDTKSDDDRPTLKRRDDSSN
Ga0302224_101182611	3300028759	Palsa	KPSLRRTSNTSDSSNTGGDQQQQGDDRPTLKRRDDSSN
Ga0302230_102150601	3300028871	Palsa	LDQKDANKPSLRRTSTTDKSGNTTDNSDDDRPTLKRRDDSPDQSQTQQQ
Ga0311340_103705211	3300029943	Palsa	KDANKPSLRRTSASTDSSGNDKSDDDRPTLKRRDDSSN
Ga0311356_104678942	3300030617	Palsa	GNKPSLRRTSNTDSKSGNTQTDDDRPTLKRRDDSSN
Ga0302316_102940172	3300030646	Palsa	ENKPSLRRTSTSGSDKTGDSTDDDRPTLKRRDDSSSN
Ga0316363_103894251	3300030659	Peatlands Soil	ASKPSLRRASSTDKNGTDDKSSDDDRPTLKRRDDGSN
Ga0310038_102141381	3300030707	Peatlands Soil	EKDTNKPSLRRTSNTTDKSGDTKSDDDRPTLKRRDDSSN
Ga0302314_108870682	3300030906	Palsa	DSNKPSLRRTSNTSDNSGSTTQSDDDRPTLKRRDDSSN
Ga0170834_1046094781	3300031057	Forest Soil	GSRPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ
Ga0170818_1082148141	3300031474	Forest Soil	KDANKPSLRRTSNTSDKSDDKKDDERPTLKRRDDSN
Ga0318534_104873612	3300031544	Soil	QKDSAKPSLRRTSNPTDKSDDGKKDDDDRPTLKRREDSN
Ga0310686_1002156542	3300031708	Soil	VIDDKDSSKPSLRRTSNPSDTSTDGKSDDDRPTLKRRDDSSN
Ga0308175_1004912512	3300031938	Soil	DEKDANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDDSN
Ga0310916_107022022	3300031942	Soil	LDQKDSAKPSLRRTSNTGDKSDDKKDDDDRPTLKRRDDSN
Ga0306926_101888381	3300031954	Soil	LDQKDSAKPSLRRTSNTTDKSDDKKDDDDRPTLKRREDSN
Ga0307479_112600972	3300031962	Hardwood Forest Soil	DSNRPSLRRTSNTTDKSGDQKTDDDRPTLKRRDDSN
Ga0307479_116782021	3300031962	Hardwood Forest Soil	KDANKPSLRRTANTTDKSGDTKSDDDRPTLKRRDDSN
Ga0307479_116949411	3300031962	Hardwood Forest Soil	DSSKPSLRRTANTTDKSGDTKSDDDRPTLKRRDDSN
Ga0311301_1004571410	3300032160	Peatlands Soil	DKDSSKPSLRRTSNPSDKSGDTKSDDDRPTLKRRDDSSN
Ga0311301_112820363	3300032160	Peatlands Soil	VIEEKDGNKPSLRRTSTSDKTSGTDKSGDDDDRPTLKRRDDSQGQTQQQ
Ga0307470_105019521	3300032174	Hardwood Forest Soil	KVLDQKDGNKPSLRRTSASSDDKSGDSKTDDDRPTLKRRDDSSN
Ga0307471_1027805532	3300032180	Hardwood Forest Soil	KEGSKPSLRRASTSDKSGKDDKTDDDRPTLKRRDDTKQN
Ga0307471_1042023632	3300032180	Hardwood Forest Soil	ETNRPSLRRASAGDNNGQDNKNDDDRPTLKRRADQN
Ga0307472_1019299061	3300032205	Hardwood Forest Soil	DDGKKPSLRRTSTPDKNGSDDKTSDDGRPTLKRRDDSSN
Ga0335078_101843625	3300032805	Soil	KDGNKPSLRRASNPNDNSGDQKQDDDRPTLKRREDSN
Ga0335069_121783032	3300032893	Soil	KPSLRRTSSTDKTSQDGKTSDDDHPTLKRRDDNNN
Ga0314866_056239_539_652	3300033807	Peatland	EGNKPTLRRASSADKSGKDQGSTDDEHPTLKRRDDNN
Ga0334828_039847_1218_1343	3300033822	Soil	KDGSKPSLRRTSSTDKTSTGTDKSDDDRPTLKRRDDTPNQN
Ga0371487_0507973_362_505	3300033982	Peat Soil	HKVIEEKDSSKPSLRRTSTSDKTSGTDTSSDDDRPTLKRRDDNPNQN