Metagenome / Metatranscriptome Family F055870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	100 residues
Representative Sequence	RKLVSLRTLRWDELGKSALTAVVAGGLSLEVARSVTPFISGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP
Number of Associated Samples	112
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.19 %
% of genes near scaffold ends (potentially truncated)	97.10 %
% of genes from short scaffolds (< 2000 bps)	88.41 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.188 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.217 % of family members)
Environment Ontology (ENVO)	Unclassified (23.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.116 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.88% β-sheet: 0.00% Coil/Unstructured: 37.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04519	Bactofilin	12.32
PF13781	DoxX_3	4.35
PF12732	YtxH	2.90
PF14559	TPR_19	2.90
PF03023	MurJ	2.17
PF13761	DUF4166	2.17
PF15780	ASH	1.45
PF02630	SCO1-SenC	1.45
PF07676	PD40	1.45
PF09348	DUF1990	1.45
PF01039	Carboxyl_trans	0.72
PF12867	DinB_2	0.72
PF13676	TIR_2	0.72
PF00069	Pkinase	0.72
PF03852	Vsr	0.72
PF13304	AAA_21	0.72
PF13391	HNH_2	0.72
PF00486	Trans_reg_C	0.72
PF13545	HTH_Crp_2	0.72
PF14072	DndB	0.72
PF13432	TPR_16	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	12.32
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.90
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	2.17
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	2.17
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	2.17
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.72
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.72
COG3727	G:T-mismatch repair DNA endonuclease Vsr, very short patch repair protein	Replication, recombination and repair [L]	0.72
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.19 %
Unclassified	root	N/A	26.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.19 %
Unclassified	root	N/A	26.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.19 %
Unclassified	root	N/A	26.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
Unclassified	root	N/A	26.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.22 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.22 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.80 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.22 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.22 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.45 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.22 %
Gimesia maris	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris	1.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10226207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1217	Open in IMG/M
3300001648\|JGI20242J16303_105547	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300002245\|JGIcombinedJ26739_100307644	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris	1469	Open in IMG/M
3300002245\|JGIcombinedJ26739_100552953	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300002245\|JGIcombinedJ26739_100556224	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300002245\|JGIcombinedJ26739_101225678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300004080\|Ga0062385_10866309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	597	Open in IMG/M
3300004092\|Ga0062389_101433066	Not Available	875	Open in IMG/M
3300005538\|Ga0070731_10027906	All Organisms → cellular organisms → Bacteria	3843	Open in IMG/M
3300005541\|Ga0070733_10125691	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005598\|Ga0066706_10072555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2414	Open in IMG/M
3300005602\|Ga0070762_10609042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	726	Open in IMG/M
3300005610\|Ga0070763_10532589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005610\|Ga0070763_10696902	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005921\|Ga0070766_10210197	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300006028\|Ga0070717_10388719	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300006176\|Ga0070765_101622868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300009520\|Ga0116214_1005657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4492	Open in IMG/M
3300009521\|Ga0116222_1127855	Not Available	1094	Open in IMG/M
3300009524\|Ga0116225_1218882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300009525\|Ga0116220_10571104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300009552\|Ga0116138_1150304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300009624\|Ga0116105_1007827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2170	Open in IMG/M
3300009634\|Ga0116124_1209203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300009764\|Ga0116134_1110424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300009839\|Ga0116223_10504754	Not Available	704	Open in IMG/M
3300010339\|Ga0074046_10058201	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300010379\|Ga0136449_103170828	Not Available	636	Open in IMG/M
3300011120\|Ga0150983_10212328	Not Available	584	Open in IMG/M
3300011120\|Ga0150983_10859850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	960	Open in IMG/M
3300011120\|Ga0150983_14095049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	979	Open in IMG/M
3300011120\|Ga0150983_16014774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	668	Open in IMG/M
3300011271\|Ga0137393_10632338	Not Available	918	Open in IMG/M
3300012924\|Ga0137413_10251978	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300014167\|Ga0181528_10310635	Not Available	853	Open in IMG/M
3300014201\|Ga0181537_10669795	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300014489\|Ga0182018_10051509	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300014489\|Ga0182018_10376210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	762	Open in IMG/M
3300014489\|Ga0182018_10602773	Not Available	576	Open in IMG/M
3300014501\|Ga0182024_10395280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1790	Open in IMG/M
3300014657\|Ga0181522_11025059	Not Available	512	Open in IMG/M
3300017935\|Ga0187848_10329840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300017935\|Ga0187848_10333540	Not Available	630	Open in IMG/M
3300017948\|Ga0187847_10516479	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300018009\|Ga0187884_10009413	All Organisms → cellular organisms → Bacteria	6041	Open in IMG/M
3300018013\|Ga0187873_1275686	Not Available	619	Open in IMG/M
3300018017\|Ga0187872_10305643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300018042\|Ga0187871_10543271	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300018044\|Ga0187890_10011961	All Organisms → cellular organisms → Bacteria	5499	Open in IMG/M
3300018047\|Ga0187859_10098101	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300018062\|Ga0187784_11574894	Not Available	520	Open in IMG/M
3300018086\|Ga0187769_10093103	All Organisms → cellular organisms → Bacteria → Acidobacteria	2156	Open in IMG/M
3300019786\|Ga0182025_1292440	All Organisms → cellular organisms → Bacteria → Acidobacteria	2242	Open in IMG/M
3300020579\|Ga0210407_10601442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	857	Open in IMG/M
3300020579\|Ga0210407_10889509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	683	Open in IMG/M
3300020580\|Ga0210403_10207922	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris	1606	Open in IMG/M
3300020583\|Ga0210401_10107012	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300020583\|Ga0210401_10244054	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300021088\|Ga0210404_10283921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	907	Open in IMG/M
3300021170\|Ga0210400_10621854	Not Available	890	Open in IMG/M
3300021180\|Ga0210396_11357895	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300021401\|Ga0210393_10291859	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300021401\|Ga0210393_11159779	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300021404\|Ga0210389_11344938	Not Available	546	Open in IMG/M
3300021406\|Ga0210386_10252552	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300021406\|Ga0210386_10534994	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300021407\|Ga0210383_10098209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2462	Open in IMG/M
3300021420\|Ga0210394_11142715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	670	Open in IMG/M
3300021432\|Ga0210384_11239410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	650	Open in IMG/M
3300021474\|Ga0210390_10303507	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300021474\|Ga0210390_11279897	Not Available	589	Open in IMG/M
3300021476\|Ga0187846_10122438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300021559\|Ga0210409_11401072	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300022721\|Ga0242666_1028493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1091	Open in IMG/M
3300022722\|Ga0242657_1020686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1241	Open in IMG/M
3300022732\|Ga0224569_117027	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300022873\|Ga0224550_1027461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	806	Open in IMG/M
3300023250\|Ga0224544_1069080	Not Available	514	Open in IMG/M
3300024227\|Ga0228598_1054158	Not Available	796	Open in IMG/M
3300024271\|Ga0224564_1074418	Not Available	678	Open in IMG/M
3300024295\|Ga0224556_1035278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300025414\|Ga0208935_1014804	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025612\|Ga0208691_1016122	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300027117\|Ga0209732_1038622	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300027297\|Ga0208241_1086138	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300027439\|Ga0209332_1082165	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300027609\|Ga0209221_1145537	Not Available	591	Open in IMG/M
3300027629\|Ga0209422_1025484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1464	Open in IMG/M
3300027729\|Ga0209248_10222636	Not Available	554	Open in IMG/M
3300027729\|Ga0209248_10222900	Not Available	553	Open in IMG/M
3300027745\|Ga0209908_10101402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	712	Open in IMG/M
3300027745\|Ga0209908_10171267	Not Available	582	Open in IMG/M
3300027745\|Ga0209908_10211937	Not Available	534	Open in IMG/M
3300027783\|Ga0209448_10188969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300027795\|Ga0209139_10322194	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300027812\|Ga0209656_10015114	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	4795	Open in IMG/M
3300027824\|Ga0209040_10299293	Not Available	784	Open in IMG/M
3300027854\|Ga0209517_10517870	Not Available	647	Open in IMG/M
3300027855\|Ga0209693_10603314	Not Available	518	Open in IMG/M
3300027895\|Ga0209624_10421054	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300027903\|Ga0209488_10075932	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300028017\|Ga0265356_1014996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300028037\|Ga0265349_1018783	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300028759\|Ga0302224_10282092	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300028759\|Ga0302224_10403612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	555	Open in IMG/M
3300028779\|Ga0302266_10273903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300028779\|Ga0302266_10359782	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300028795\|Ga0302227_10298658	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300029882\|Ga0311368_10865302	Not Available	609	Open in IMG/M
3300029883\|Ga0311327_10519603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300029910\|Ga0311369_10846030	Not Available	736	Open in IMG/M
3300029911\|Ga0311361_10398347	All Organisms → cellular organisms → Bacteria → Acidobacteria	1449	Open in IMG/M
3300029911\|Ga0311361_10453948	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300029911\|Ga0311361_10820024	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300029951\|Ga0311371_11873284	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300029951\|Ga0311371_12068654	Not Available	601	Open in IMG/M
3300029952\|Ga0311346_10447502	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300029953\|Ga0311343_11385942	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300029954\|Ga0311331_11031312	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300029955\|Ga0311342_10128603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2606	Open in IMG/M
3300030011\|Ga0302270_10227848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300030013\|Ga0302178_10446582	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300030054\|Ga0302182_10176036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	920	Open in IMG/M
3300030058\|Ga0302179_10427155	Not Available	583	Open in IMG/M
3300030503\|Ga0311370_12113721	Not Available	557	Open in IMG/M
3300030506\|Ga0302194_10309319	Not Available	626	Open in IMG/M
3300031231\|Ga0170824_110988523	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300031525\|Ga0302326_11316283	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300031708\|Ga0310686_107633628	Not Available	567	Open in IMG/M
3300031708\|Ga0310686_112229482	Not Available	1387	Open in IMG/M
3300031754\|Ga0307475_10800037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300031754\|Ga0307475_11092576	Not Available	624	Open in IMG/M
3300031823\|Ga0307478_10619890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	905	Open in IMG/M
3300031823\|Ga0307478_11041411	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032160\|Ga0311301_10671556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1467	Open in IMG/M
3300032205\|Ga0307472_100827641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	849	Open in IMG/M
3300032828\|Ga0335080_11430608	Not Available	686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.99%
Aquatic	Environmental → Aquatic	18.84%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.70%
Peat	Environmental → Terrestrial → Peat	19.57%
Freshwater	Environmental → Aquatic → Freshwater	18.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Cave	Environmental → Terrestrial → Cave	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.84%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.70%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.17%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	2.17%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.17%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102262071	3300001593	Forest Soil	WLLHYRKMVSLRTLRWDELGKSALTAVVAGGISLEVAKSVTPFVSSHGSRITDLLQLGLISVTWAAATAVGLWLLKSQLPGDLRRRKQTAYPAVAHGESKEILGAGTQP*
JGI20242J16303_1055472	3300001648	Forest Soil	LRTLRWDELGKSAVIAVVAGGISLEVARSVTPFVSGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP*
JGIcombinedJ26739_1003076441	3300002245	Forest Soil	GKSALTAVIAGGISLEVTRSVTPLIPARSSRVADLLQLGLISVTWAAATGVGLRLLKSQLPNELRPRKKIAYPAVAQSEGKEILDAGTQP*
JGIcombinedJ26739_1005529532	3300002245	Forest Soil	GKSALTAVIAGGISLEVARSVTPLISARSSRVADLLQLGLISVTWAAATGVGLRLLKSQLPNELRPRMKVAYPAVAQSEGKEILDAGTQP*
JGIcombinedJ26739_1005562242	3300002245	Forest Soil	DLRWGELGKSALTAVIAGGISLEVARSVTPLISAHSSRVADLLQLALISVTWAAATGVGLRLLKSQLPNELRLRKKIAYPAVAQGEGKEILDAGTQP*
JGIcombinedJ26739_1012256782	3300002245	Forest Soil	AGGISLAVAKSVTPFISGHGSRIADLLQLGLITVTWGAATALGLVLLKSQLPNDLRRRKQSPFPAVTHGETKEILGAGTQP*
Ga0062385_108663091	3300004080	Bog Forest Soil	DIGIGANLLALALLLHYRKLVSLRTLRWDELGKSALTAVVAGGISLEVARSVIPFVSAQGSRIADLLQLSLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP*
Ga0062389_1014330663	3300004092	Bog Forest Soil	NLLALAWLLHYRKLVSLGGLPWGELGKAGLTAAVAGGISFEVAKVVPLTVSTLGSRMADVVQLALVSVTWAAAVAMGLWLLRSHLPRALRNRKGTAYPAVAQGETKEIMGAGREP*
Ga0070731_100279065	3300005538	Surface Soil	AVISLEVARGATALLAVQGSRTADVMQLALISVTWAAATAVGLWLLRSELPNDLRRRKAAYPAVAEGGSKEIMSTGTEP*
Ga0070733_101256911	3300005541	Surface Soil	ATLRWGELGKSALTAVIAGVISLEVAKIVTPVVSGRGSRVTDLLRLGLVSVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQGESREILGSGTQP*
Ga0066706_100725552	3300005598	Soil	LNLLALAWLLHYRKLVALGELRWGELGKSALTAVIAGAVSFEVAKVVPLSISGLGSRVADGLRLGLISITWAAAVAGGLWLLRSELPADLRRRRVAAYPAVAGAQAEETRGAGTQP*
Ga0070762_106090421	3300005602	Soil	HLRKLVSLGTLRWGELGKSALTAAVAGGVSLEVARSVTPFASGYGRRVIDLLQLALISITWAAAMALGLWLLRSQLPNDLRRRKATPNPGVAEGEGKEILGAGTQP*
Ga0070763_105325891	3300005610	Soil	ASDTGIGANLLALAWLLHHRKMVSLRTLRWDELGKSAFTAIAAGGISLEVARIVPPSAYGHGSRIADLLQLALITVTWAAATVLSLWLLKSQLPNDLRRRKQVAYPAVAHNEGKEILGAGTEP*
Ga0070763_106969021	3300005610	Soil	GIGANLLALALLLHYRKLVSLRNLRWDELGKSVLTAIVAGGISLAVARSVIPFASAQNSRIADVLQLGLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP*
Ga0070766_102101972	3300005921	Soil	LAWLLHYRKLVSLRTLRWDELGKSALIGVVAGGISLEVARSAMPFISGHGSRVADLLQLGLVSLTWAAATAVGLWLLRSQLPGDLRRRKAAYPAVAEGESKEILGAGTQP*
Ga0070717_103887193	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GELGKSGLTAIVAGGLSFRVAKIVPLSTSGHGSRSADLLQLGLITVTWAAAVAGGLWLLRSRLPLDLRRRKATAYPGVAQGESTEIIRTGGQP*
Ga0070765_1016228681	3300006176	Soil	VSLRTLRWDELGKSAFTAIAAGGISLEVARIVPPSAYGHGSRIADLLQLALITVTWAAATVLSLWLLKSQLPNDLRRRKQVAYPAVAHNEGKEILGAGTEP*
Ga0116214_10056571	3300009520	Peatlands Soil	MVSLKTLRWDELGKSGLTAVVAGGISLEVANSITPFVSGHGSRIADALQLALISVTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAEGESKEIMGAGTQP*
Ga0116222_11278552	3300009521	Peatlands Soil	LVAGAISLEVAKIVPLPRSGHGSRGADLLQLALISVTWAAATAGGLWLLRSQLPDDLRRRKATAYPGVAQGQSGEILGSGTQP*
Ga0116225_12188823	3300009524	Peatlands Soil	GLTAVVAGGISLEVAYSITPFVSGHGSRIADALQLALISVTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAEGESKEIMGAGTQP*
Ga0116220_105711042	3300009525	Peatlands Soil	SALTACIAGGISLEVSRSVAPFVSAQGSRVADLLQLALISLTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAEGEGKEIMGAGTQP*
Ga0116138_11503042	3300009552	Peatland	HWDELGKSALTAIVAGGISLEVAKSVPLPAYGHSSRITDLLQLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAHNEGKEILGAGTEP*
Ga0116105_10078271	3300009624	Peatland	NLLALAWLLHYRKLVSLRTLRWGELGKSAVTAVVAGGISLEVAKVVTPLVSRFGSRITDVLQLGLISLTWAAATALGLWLLKSQLPNDLRRRKKIAYPAVAQNEGKEILGAGTQP*
Ga0116124_12092031	3300009634	Peatland	LRWNELGKSALTAVIAGGISLEVARSVTPFVSGHGSRTADLLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILRAGTQP*
Ga0116134_11104242	3300009764	Peatland	GGISLEVAKSVPLPAYGHSSRITDLLQLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAHNEGKEILGAGTEP*
Ga0116223_105047541	3300009839	Peatlands Soil	HYRKLVSLRTLRWDELGKSALIAVVAGVVSLEVARSVTPFVSGYGSRVADVLQLGLISITWAAATAVGLWLLRSQLPNDLRRRKTAAYPGVAEGEGKEIMGAGTQP*
Ga0074046_100582014	3300010339	Bog Forest Soil	WDELGKSALTAVVAGGMSLEVAKIVTPLVAGQGSRIADLLQLGLISVTWAAATALGLWLLKSQLPNDLRRRKKVAYPAVAENEGKEILGAGTQP*
Ga0136449_1031708281	3300010379	Peatlands Soil	GAISLEVAKSVPLPPYGHGSRVADILQLALISVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQGEGKEIMDAGTQP*
Ga0150983_102123281	3300011120	Forest Soil	SPVAGGISLGVANSVTQLVSGYGSRFADVLQLVVISLTWAAATVVGLGLLKSQLPNDLRRRKTAYPAVAEGESKEIMGAGTQP*
Ga0150983_108598501	3300011120	Forest Soil	LGKSALTAMVAGGISLEVAKSVTPFVSAQGSRIADLVQLGLISVTWAAAAAAGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTRP*
Ga0150983_140950492	3300011120	Forest Soil	IGANLLALAWLLHYRKLVSLRTLRWDELGKSAVIGVVAGGISLEVAKSVTPFISRHGSRVADLLQLGLVSVTWAAATAVGLWLLRSQLPNDLKRRKTAYPAVAEGEGKEIMGAGTQP*
Ga0150983_160147741	3300011120	Forest Soil	LGKSALTAVVAGGISLEVARSVTPFVSAHGSRVADLLQLALISITWAAACAVGLWLLRSQLPQDLRRRKTAYPAVAEGESKEILGAGTQP*
Ga0137393_106323381	3300011271	Vadose Zone Soil	ALAWLLHYRKLVSLRTLRWDELGKSALIGVVAGGISLEVVNSVTPFVSAYGSRVGDLLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKTAYPAVAEGESKEIMGAGTQP*
Ga0137413_102519781	3300012924	Vadose Zone Soil	IGIGANLLALAWLLHYRKLVSMRTLRWDELGKSAVIGVVAGGISLEVAKSVTPLLSSQGSRVSDLLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKTAYPAVAEGESKEIMGAGTQP*
Ga0181528_103106352	3300014167	Bog	AVTALVAGGISLETARNIPLPTFGRASRIPDLLHLTFVTLTWAAATAVGLWLLKSQLPNDLRRKQIAYPAVAQNEAKEILGAGTQP*
Ga0181537_106697951	3300014201	Bog	VVGLAFASDFGIGANLLALALLLHLRKLVSLGTLRWGELGKSAVTAVFAGVLSLEVARGIMPFISGHGSRIADVLQLVVISLTWAAATALGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEILGAGTQP*
Ga0182018_100515094	3300014489	Palsa	LALLLHYRKLVSLRTLRWDELGKSALTAVVAGGLSLEVARNVTPFISGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP*
Ga0182018_103762102	3300014489	Palsa	YRKLVSLRTLRWDELGKSALTAAIAGGVSLEVVRSITPLVSGHGSRVVDVLQLALISITWAAATAVGLWLLRSQLPNDLRRRKATPYPAVAEGEAKEIMGAGTQP*
Ga0182018_106027732	3300014489	Palsa	LALLLHYRKLVSLRTLRWDELGKSALTAVVAGGLSLEVARSVTPFISGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP*
Ga0182024_103952801	3300014501	Permafrost	MVSLKTLHWDELGKSALTAIVAGGISLEVAKSVPLPAYGHSSRVTDLLRLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAYNQGKEILGAGTEP*
Ga0181522_110250591	3300014657	Bog	RWGELGKSAVTGVVAGGISLEVARSVPLPALGNGSRSTDFLQLGLITVTWAAATAAGLWLLKSQLPNDLRRRKQIAYPGVAQTEGKEIMDAGTQP*
Ga0187848_103298401	3300017935	Peatland	LGKSALTAIVAGGISLEVAKSVPLPAYGHSSRITDLLQLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187848_103335402	3300017935	Peatland	WLLHYRKMVSLRTLRWDELGKSALTAIVAGGISLEVARIVPPSAYGHGSRVADLLQLALITVTWAAATLLGLWLLKSQLPNDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187847_105164791	3300017948	Peatland	IGANLLALAFLLHFRKLVSLGTMRWGELGKSAVTAVVAGVLSLEVARSITPFISGHGSRVADVLQLVVISLTWAAATALGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEIMGAGTQP
Ga0187884_100094131	3300018009	Peatland	LAWLLDYRKMVSLRTLRWDELGKSAFTAIAAGGISLEVARIVPPSAYGHGSRVADLLQLALITVTWAAATLLGLWLLKSQLPNDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187873_12756862	3300018013	Peatland	GGISLEVARIVPPSAYGHGSRVADLLQLALITVTWAAATLLGLWLLKSQLPNDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187872_103056432	3300018017	Peatland	TAIVAGGISLEVAKSVPLPAYGHSSRITDLLQLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187871_105432712	3300018042	Peatland	LLALALLLNFRRLVSLRTLRWGELGKSALTAVVAGGISLEVAKSIIPFISAQGSRVADLVQLGLISVTWAAAGSVGLWLLKSQLPNDLRRRKATAYPAVAEGE
Ga0187890_100119616	3300018044	Peatland	YGVVGLAFASDTGIGANLLALAWLLHYRKMVSLRTLRWDELGKSALTAIVAGGISLEVARIVPPSAYGHGSRVADLLQLALITVTWAAATLLGLWLLKSQLPNDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0187859_100981012	3300018047	Peatland	RWDELGKSAFTAIVACAISLEVAKIVPLTAAGHATRVTDLLQLALISVTWAAASALGLWLLKSQLPSDLRRRRQVAYPAVAQNETKEILGAGTQP
Ga0187784_115748941	3300018062	Tropical Peatland	LLHYRKLVSLRGLRWDELGKSGLTAIIAGGLSLEVARSLTPFVSGYVSRIADFLQLALISVTWAAAALLGLWLLRSSLPNDLRRRKTEYPGVAEGESEEILGAGTQP
Ga0187769_100931032	3300018086	Tropical Peatland	AVVAGGISLEVAKSATPFLSRYSSRVADVLQLGLISITWAAATAVGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEIMGAGTQP
Ga0182025_12924403	3300019786	Permafrost	MVSLRTLRWDELGKSALTAVVAGAISLEVAKSVPLPAYGHGSRVTDLLQLALISLTWAAATLLGLWLLKSQLPNDLRRRKVTAYPAVAQVEGKEIIEAGTEP
Ga0210407_106014422	3300020579	Soil	DIGIGMNLLALAWLLHYRKLVSLATLRWGELGKSALTAMIAGGISLEVAKIVTPVVSGRGSRITDLLQLGLVTVTWAAATAVGLWLLKSQLPSDLRRRKATAYPAVAQGEGREILGSGTQ
Ga0210407_108895092	3300020579	Soil	VSLRTLRWDELGKSALTAVVAGGISLEVAKSVALPALGNGSRLSDILQLALISVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAKGEGKEILGTGTQP
Ga0210403_102079221	3300020580	Soil	LALLLHHRKLVSLRTLRWDELGKSALTAMVAGGISLEVAKSMTPFVSAQGSRIADLLRLSLISVTWAAAAVVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP
Ga0210401_101070121	3300020583	Soil	KLVSLRNLRWDELGKSVLTAIVAGGISLAVARSVIPFVSAQNSRIADVLQLGLISVTWAAAAAVGLWLLRSQLPNDLRRRKATAYSAVAEGESKEILGSGTQP
Ga0210401_102440541	3300020583	Soil	TLRWDELGKSALTAMVAGGISLVVARSVIPIVSARGSRIADLLQLGLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGQSKEILGSGTQP
Ga0210404_102839212	3300021088	Soil	MVAGGISLEVAKSVTPFVSAQGSRIADLVQLGLISVTWAAAAAAGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTRP
Ga0210400_106218541	3300021170	Soil	LVAIAGLLHYRKMVSLRTLRWDELGKSALTALVAGGISLEVARIVPMPAFGHASRLTDILQLVLVSVTWGAAAALGLWLLKSQLPGDLRRRKQVAYPAVAQNETKEIMGAGTQP
Ga0210396_113578951	3300021180	Soil	AGGISLEVAKSVTPLIAGQGSRVADLLQLGLISVTWAAATAAGLWILKSQLPNDLRRGKATAYPAVAEGESKEILGAGTQP
Ga0210393_102918591	3300021401	Soil	AWLLHYRKMVSLGDLRWGELGKSALTAVIAGGISLEVARSVTPLISARSSRVADLLQLGLISVTWAAATGVGLRLLKSQLPNELRPRRKIAYPAVAQSEGKEILDAGTQP
Ga0210393_111597792	3300021401	Soil	VSLRTLRWDELGKSAVIGMVAGGVSLEVSRSFAPFVSGHGSRVADLLHLGLISLTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEDKEIMGAGTQP
Ga0210389_113449382	3300021404	Soil	ALAWLLHYRKMVSLRTLRWGELGKSALTAVVAGGISLEVARSVTPFVSAHGSRVADLLQLALISITWAAACAVGLWLLRSQLPQDLRRRKTAYPAVAEGESKEILGAGTQP
Ga0210386_102525523	3300021406	Soil	GGISLEVARSVTPLIPAHSSRVADLVQLGLISVTWAAATGVGLRLLKSQLPNELRPRKKIAYPAVAQSEGKEILDAGTQP
Ga0210386_105349941	3300021406	Soil	IGANLFALAWLLHYRKMVSLGTLRWGELGKSAVIAVVAGGISLGVADSVTQLVSGYGSRFADVLQLVVISLTWAAATVVGLGLLKSQLPNDLRRRKTAYPAVAEGESKEIMGAGTQP
Ga0210383_100982093	3300021407	Soil	LRWGELGESALTAVVAGGISLEVARSVTHFISGYDSRFVDLLRLALISITWAAAVALGLWLLRSQLPNDLRRRKATAYPAVAEGESKEIMGAGTQP
Ga0210394_111427151	3300021420	Soil	ALALLLHYRKLVSLRTLRWDELGKSALTAAVAGGISLEVARSVIPFVSAQGSRIADLLQLSLISVTWAAAAAVGLWLLRSQLPNDLRRRKAAAYPAAAEGESKEILGSGTQP
Ga0210384_112394102	3300021432	Soil	LVSLRTLRWGELGKSALIGIVAGGVSLEAAKGVTPFISGDGSRLADLLQLGLVSITWAAATVVGLWLLRSQLPGDLRRRRAAYPAVAEGESKEILGAGTQP
Ga0210390_103035071	3300021474	Soil	VSLGTLRWNELGKSALTAVVAGVVSLEVARGVTPFISGHGSRVADVLQLGLISITWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGESKEIMGAGTQP
Ga0210390_112798971	3300021474	Soil	HYKKLVSLRTLRWDELGKSVLTAVVAGGLSLEVAKTIPLPAYGHGSRLTDVLQLALISVTWAAAAAVGLWLLRSQLPNDLRRRKATAYPAVAEGEGKEIMGAGTQP
Ga0187846_101224383	3300021476	Biofilm	GVVAGFISLEVAKNFTPLVGGHGSRAADLLQLGLISVTWAAATAAGLWLLKSQLPNDLRRRQATAYPAVAEGEGKEILGAGTQP
Ga0210409_114010721	3300021559	Soil	DELGKSALIAVVAGGISLEVARSVTPFISGHGSRVADVLQLALISLTWAAATAAGLWLLRSQLPSDLRRRKTAYPAVAEGESKEIMGAGTQP
Ga0242666_10284931	3300022721	Soil	LHYRKMVSLKTLRWDELGKSATTALAAGGISLEVARSVTPLVSAHGSRISDVLQLAVISVTWAAAATLGLWILRSQLPRDLRRRKATSYPGVAQAESKEILDAGRQP
Ga0242657_10206861	3300022722	Soil	ALTAVIAGGISLEVAKIVTPVVSGRGSRVTDLLQLSLVSVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQGESREILGAGTQP
Ga0224569_1170272	3300022732	Rhizosphere	ALACLLHYRKMVSLRTLRWDELGKSALTAVVAGVISLEVAKIVPLPAQGHGSRLTDVLQLALISVTWAAATAVGLWLLKSQLPNDLRRRKKIAYPAVAQNEGREIMDAGRQP
Ga0224550_10274611	3300022873	Soil	GKSALIAVVAGVASLEVARSVTPFISGYGSRVADVLQLALISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP
Ga0224544_10690801	3300023250	Soil	AGGISFAVARAAPASSAEHGSRLGDVLQLALITVTWAAATAAGLWLLRSQLPGDLRRRRATAYPGVAEAEGKEILGSGTQP
Ga0228598_10541581	3300024227	Rhizosphere	AALRWDELGKSALTAVVAGVVSLEVARSVTPFVSARGSRVADILQLGLISVTWAAATAVGLWLLKSQLPNDLRRRKAAAYPAVAHGEGKEIMGAGTQP
Ga0224564_10744181	3300024271	Soil	WDELGKSALTAIVAGGISLQVAKTVPLPAYGRGSRITDVLQLTLITVTWAAATTLGLWLLKSQLPNDLRRRKQVAYPAVAHNEGKEILGAGTEP
Ga0224556_10352782	3300024295	Soil	VIAGGISLEVARSVTPFVSGHGSRTADLLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILRAGTQP
Ga0208935_10148041	3300025414	Peatland	NLLALAWLLHYRKLVSLRTLRWGELGKSAVTAVVAGGISLEVAKVVTPLVSRFGSRITDVLQLGLISLTWAAATALGLWLLKSQLPNDLRRRKKIAYPAVAQNEGKEILGAGTQP
Ga0208691_10161223	3300025612	Peatland	VTAVVAGGISLEVAKVVTPLVSRFGSRITDVLQLGLISLTWAAATALGLWLLKSQLPNDLRRRKKIAYPAVAQNEGKEILGAGTQP
Ga0209732_10386222	3300027117	Forest Soil	LHYRKMVSLGDLRWGELGKSALTAVIAGGISLEVARSVTPLIPARSSRVADLLQLGLISVTWAAATGVGLRLLKSQLPNELRPRRKIAYPAVAQSEGKEILDAGTQP
Ga0208241_10861381	3300027297	Forest Soil	DELGKSALTALVAGGISLEVARIVPMPAFGHASRLTDILQLVLVSVTWGAAAALGLWLLKSQLPGDLRRRKQVAYPAVAQNETKEIMGAGTQP
Ga0209332_10821651	3300027439	Forest Soil	TAVVAGGISLEVAKSVTPFVSSHGSRITDLLQLGLISVTWAAATAVGLWLLKSQLPGDLRRRKQTAYPAVAHGESKEILGAGTQP
Ga0209221_11455372	3300027609	Forest Soil	LLALAWLLHYRKMVSLRTLRWDELGKSALTAIAAGGISLEVAKTVPLPAYGHASRIADILQLALLSVTWAAATAAGLWLLKSQLPSDLRRRKQIAYPAVAQSGGKEIMDTGTQP
Ga0209422_10254841	3300027629	Forest Soil	AWLLHYRKMVSLGDLRWGELGKSALTAVIAGGISLEVAKSVTPFVSSHGSRITDLLQLGLISVTWAAATAVGLWLLKSQLPGDLRRRKQTAYPAVAHGESKEILGAGTQP
Ga0209248_102226362	3300027729	Bog Forest Soil	LALAWLLHYRKLVSLRTLRWDELGKSALTAVVAGGVGLEVAKGVTPFVSAQGSRVADLLQLSLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP
Ga0209248_102229002	3300027729	Bog Forest Soil	NLLALALLLHYRKLVSLRTLRWDELGKSALTAVVAGGISLEVARSVIPFVSAQGSRIADLLQLSLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP
Ga0209908_101014022	3300027745	Thawing Permafrost	HYRKLVSLRTLRWDELGKSALIAVVAGVASLEVARSVTPFISGYGSRVADVLQLALISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP
Ga0209908_101712671	3300027745	Thawing Permafrost	NLFALALLLHLRKLVSLQTLRWGELGKSALTAAVAGGVSVEVARSVTPFFYGHSSRVVDVLQLALISITWAAATALGLWLLRSQLPNDLRRRKATPNLGVAEGEGKEILGAGTQP
Ga0209908_102119371	3300027745	Thawing Permafrost	RKLVSLRTLRWDELGKSALTAVVAGGLSLEVARSVTPFISGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP
Ga0209448_101889692	3300027783	Bog Forest Soil	WDEMGKSALTACVAGGISLEVSRSVAPFVSAHGSRFADLLQLALISVTWAAAAAVGLWLLSSQLPNDLRRRKATAYPAVAEGESKEIMGAGTQL
Ga0209139_103221942	3300027795	Bog Forest Soil	RWDELGKSALTAVVAGGISLEVARSVIPFVSAQGSRIADLLQLSLISVTWAAAAAVGLWLLKSQLPNDLRRRKATAYPAVAEGESKEILGSGTQP
Ga0209656_100151148	3300027812	Bog Forest Soil	IGANLLALALLLHYRKLVSLRTLRWDELGKSALTGAVAGGISLAVARSVTPFVSAQGSRVADLLQLALISLTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAEGEGKEIMGAGTQP
Ga0209040_102992932	3300027824	Bog Forest Soil	LKTLRWDELGKSALTAIVAGGISLEVAKSVPLQGYGRSSRIADLLQLGLISVTWAAATLAGLWLLKSQLPSDLRRRKQIAYPAVAHNEGKEILGAGTEP
Ga0209517_105178701	3300027854	Peatlands Soil	KSALTAIVAGAISLEVAKSVPLPPYGHGSRVADILQLALISVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQGEGKEIMDAGTQP
Ga0209693_106033141	3300027855	Soil	WLLHHRKMVSLRTLRWDELGKSAFTAIAAGGISLEVARIVPPSAYGHGSRIADLLQLALITVTWAAATVLSLWLLKSQLPNDLRRRKQVAYPAVAHNEGKEILGAGTEP
Ga0209624_104210541	3300027895	Forest Soil	RKMVSLRTLRWDELGKSGLTAVVAGGISFEVARSVTPFVAGHGSRIADLLQLGLISITWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQVESKEIMGAGTQP
Ga0209488_100759325	3300027903	Vadose Zone Soil	AVVAGGLSLEVAKSVTPFVSGHGSRVVDLLQLGLISVTWAAATAVGLWLLKSQLPNDLRRRKAAYPAVAEGEGKEILGAGTQP
Ga0265356_10149961	3300028017	Rhizosphere	DELGKSAFTAIAAGGISLEVARIVPPSAYGHGSRIADLLQLALITVTWAAATVLSLWLLKSQLPNDLRRRKQVAYPAVAHNEGEEILGAGTEP
Ga0265349_10187831	3300028037	Soil	KMVSLRTLRWDELGKSALTAVVAGVISLEVAKIVPLPAQGHGSRLTDVLQLALISVTWAAATAVGLWLLKSQLPNDLRRRKKIAYPAVAQNEGREIMDAGRQP
Ga0302224_102820922	3300028759	Palsa	LAVLLHYRKLVSLGTLRWGELGKSAVTAVVAGVLSLEVARGITPFISGRGSRVADVLQLGLISVTWAAATALGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEILGAGTQP
Ga0302224_104036121	3300028759	Palsa	LTAVVAGGLSLEVARSVTPFISGYGSRVADVLQLGLISVTWAAATAVGLWLLRSQLPNDLRRRKAAAYPGVAEGEGKEIMGAGTQP
Ga0302266_102739031	3300028779	Bog	VAGGISLEVARSLTPFVSGHGSRTADVLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILGAGTQP
Ga0302266_103597821	3300028779	Bog	AFLLHFRKLVSLGTMRWGELGKSAVTAVVAGVLSLEVARSITPFISGHGSRVADVLQLVVISLTWAAATALGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEIMGAGTQP
Ga0302227_102986582	3300028795	Palsa	ALALLLHYRKLVSLRELRWGELGKSAVTAAVAGGISLEVARSIPLPYGHGSRITDLLQLALISLTWAAATSVGLWLLGSQLPNDLRRRKRTAYPGVAQSESKEILGAGTQP
Ga0311368_108653022	3300029882	Palsa	LTAVVAGGISVEVAKSIPLPAYGHGSRLTDVLQLALISVTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAQVEGKEILGAGTQP
Ga0311327_105196031	3300029883	Bog	AVVAGGISLEVARSLTPFVSGHGSRTADVLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILRAGTQP
Ga0311369_108460301	3300029910	Palsa	LHNKKLVSLGALRWDELGKSALTAVVAGGISVEVAKSIPLPAYGHGSRLTDVLQLALISVTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAQVEGKEILGAGTQP
Ga0311361_103983472	3300029911	Bog	TLRWNELGKSALTAVIAGGISLEVARSVTPFVSGHGSRTADLLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILRAGTQP
Ga0311361_104539481	3300029911	Bog	TLRWDELGKSALTGVVAGVVSLEVAKSVTPLVSRQGSRVADLMQLGLISVTWAAATALGLWLLRSQLPNDLRRRKATAYPAVAQGEGKEILAAGTQP
Ga0311361_108200241	3300029911	Bog	LRWDELGKSALTGVVAGVVSLEVAKSVTPLVSRQGSRMADLMQLGLISVTWAAATALGLWLLRSQLPRDLRRRKVTAYPAVAQGEGKEILAAGTQP
Ga0311371_118732841	3300029951	Palsa	VSLRTLRWDELGKSALTAVVAGGISLEVAKNIPLPAFGHGSRMTDLLQLALVSVTWAAATALGLWILKSQLPQDLRRRKRIAYPAVAQNETKEIMGAGTQP
Ga0311371_120686541	3300029951	Palsa	ALALLLHLRKLVSLQTLRWGELGKSALTAAVAGGVSLEVARSVTPFVSGHSSRVVDVLQLALISITCAAATTLGLWLLRSQLPNDLRRRKATPNPVVAEDEGKEILGAGTQP
Ga0311346_104475021	3300029952	Bog	LVSLGTLRWDELGKSALTGVVAGVVSLEVAKSVTPLVSRQGSRMADLMQLGLISVTWAAATALGLWLLRSQLPRDLRRRKVTAYPAVAQGEGKEILAAGTQP
Ga0311343_113859422	3300029953	Bog	AGVVSLEVAKSVTPLVSRQGSRMADLMQLGLISVTWAAATALGLWLLRSQLPRDLRRRKVTAYPAVAQGEGKEILAAGTQP
Ga0311331_110313122	3300029954	Bog	LGTLRWDELGKSALTGVVAGVVSLEVAKSVTPLVSRQGSRMADLMQLGLISVTWAAATALGLWLLRSQLPRDLRRRKVTAYPAVAQGEGKEILAAGTQP
Ga0311342_101286031	3300029955	Bog	VSLRTLRWNELGKSALTAVVAGGISLEVARSLTPFVSGHGSRTADVLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILGAGTQP
Ga0302270_102278482	3300030011	Bog	GKSALTAVVAGGISLEVARSLTPFVSGHGSRTADVLQLGLLSITWAAAVAVGLWLLKSQLPNDLRRRKKTAYPAVAEGEGKEILGAGTQP
Ga0302178_104465821	3300030013	Palsa	AGVLSLEVARGITPFISGRGSRVADVLQLGLISVTWAAATALGLWLLRSQLPNDLRRRKAAAYPAVAEGESKEILGAGTQP
Ga0302182_101760361	3300030054	Palsa	TLRWGELGKSALTAAVAGGVSLEVARSVTPFVSGYGRRVIDLVQLALISITWAAATALGLWLLRSQLPNDLRRRKRTPNPGVAEGEGKEIPGAGTQP
Ga0302179_104271552	3300030058	Palsa	KSALTAAVAGGVSLEVARSVTPFVSGYGRRVIDLLQLALISITWAAATALGLWLLRSQLPYDLRRRKRTPNPGVAEGEGKEIPGAGTQP
Ga0311370_121137211	3300030503	Palsa	ELGKSALTAVVAGGISVEVAKSIPLPAYGHGSRLTDVLQLALISVTWAAATAVGLWLLRSQLPNDLRRRKATAYPAVAQVEGKEILGAGTQP
Ga0302194_103093191	3300030506	Bog	VAGGISLEVARSVPLPALGNGSRSTDFLQLGLITVTWAAATAAGLWLLKSQLPNDLRRRKQIAYPGVAQTEGKEIMDAGTQP
Ga0170824_1109885231	3300031231	Forest Soil	LAWLLHYRKLVSLSSVRWDELGKSALVGVIAGGISLEAAKIVTPVVSDRGIRVTDVLQLGLVSVTWAAATAVGLWLLKSQLPNDLRRRKATAYPAVAQGESREILGSGTQP
Ga0302326_113162831	3300031525	Palsa	SDIGIGANLLALAWLLHYRKMVSLRTLRWDELGKSALTAVVAGGISLEVAKNIPLPAFGHGSRMTDLLQLALVSVTWAAATALGLWILKSQLPQDLRRRKRIAYPAVAQNETKEIMGAGTQP
Ga0310686_1076336281	3300031708	Soil	ALALLLHYRKLVSLKTLHWDELGKSALTAGVAGGISFEVAKTVIPFVSGHGSRVADLLQLALISITWAAAVALGLWLLRSQLPNDLRRRKTTAYPAEAEGEGKEIMGAGTQP
Ga0310686_1122294823	3300031708	Soil	LRTLRWDELGKSALTAVVAGGISLEVAKGITPFVSGHGSRIADLLQLFLISVTWAAATAAGLWFLKSQLPNDLRRRKATAYLAVAEGEGKEILGAGTQP
Ga0307475_108000372	3300031754	Hardwood Forest Soil	AWLLHYRKMVSLRTLRWDELGKSALTAAVAGGLSLGVAKSVVPLASGYSSRVADLLQLGLISVTWAAATVVGLWLLKSQLPNDLRRRKVAAYAAVAEGESKEIMGAGTQP
Ga0307475_110925761	3300031754	Hardwood Forest Soil	YRKLVSLGELPWAELGKSALTAVVAGGISFEVAKIVPLSTSGAGSRMADLLRLGLISLTWAAATAGGLCLLRSQLPHDLRRRRVTAYPGVAEGQSKEILGSGTQP
Ga0307478_106198902	3300031823	Hardwood Forest Soil	GMNLLALAWLLHYRKLVSLATLRWGELGKSALTAVVAGGISLEVAKIVTPVVSGRGSRITDLLQLGLVTVTWAAATAVGLWLLKSQLPSDLRRRKATAYPAVAQGESKEILGAGTQP
Ga0307478_110414111	3300031823	Hardwood Forest Soil	NLLALAWLLHYRKMVSLGDLRWGELGKSALTAVIAGGISLEVARSATPLIPAHSSRVADLLQLGLISVTWAAASGVGLRLLKSQLPNELRPRKKIAYPAVAQSEGKEIQDAGTQP
Ga0311301_106715561	3300032160	Peatlands Soil	ANLLALALLLHYRKLVSLRTLRWDELGKSALTAMVAGGISLAVARSVIPFVSAQGSRIADLLQLSLISVTWAAAAAVGLWLLKSRLPNDLRRRKATAYPAVAEGESKEILGSGTQP
Ga0307472_1008276411	3300032205	Hardwood Forest Soil	SDIGIGINLLALAWLLDYRKLVSLGELQWGELGKSGLTAIVAGGLSFRVAQIVPLSSSGHGSRAADLLRLGMITVTWAAAVAGGLWLLRSRLPLDLRRRKATAYPGVAQGESTEIIRTGAQP
Ga0335080_114306081	3300032828	Soil	QWKELGKAALTAIISGFISLQVAKAAPLPVSSRGSRAADLLQLGLISITWAAATAGGLWLLRSQLPNDLRRRRATAYPGVAAGQTKEILGSGREP
Ga0314861_0247586_481_822	3300033977	Peatland	VALAWLLHWKKLVRLRGLRWVELGKAALTAVVAGGISFEVAKIVPLATSGHGSRMADLTQLGLVTVTWAAAVAVGLWLLGSELPQDLRRHKGAVYPAVAQGGSKEILGSGREP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences