Metagenome / Metatranscriptome Family F055867

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055867
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	52 residues
Representative Sequence	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Number of Associated Samples	91
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.26 %
% of genes near scaffold ends (potentially truncated)	24.64 %
% of genes from short scaffolds (< 2000 bps)	71.01 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.464 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.638 % of family members)
Environment Ontology (ENVO)	Unclassified (31.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.797 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04909	Amidohydro_2	3.62
PF02738	MoCoBD_1	2.90
PF00106	adh_short	2.17
PF04264	YceI	2.17
PF07969	Amidohydro_3	2.17
PF00248	Aldo_ket_red	2.17
PF03009	GDPD	1.45
PF05960	DUF885	1.45
PF12840	HTH_20	1.45
PF01799	Fer2_2	1.45
PF14534	DUF4440	1.45
PF00990	GGDEF	1.45
PF13602	ADH_zinc_N_2	1.45
PF00440	TetR_N	1.45
PF04299	FMN_bind_2	1.45
PF13432	TPR_16	1.45
PF00111	Fer2	1.45
PF00196	GerE	1.45
PF07661	MORN_2	0.72
PF00563	EAL	0.72
PF00144	Beta-lactamase	0.72
PF04306	DUF456	0.72
PF13884	Peptidase_S74	0.72
PF04952	AstE_AspA	0.72
PF00593	TonB_dep_Rec	0.72
PF14081	DUF4262	0.72
PF13181	TPR_8	0.72
PF07638	Sigma70_ECF	0.72
PF13649	Methyltransf_25	0.72
PF02518	HATPase_c	0.72
PF00881	Nitroreductase	0.72
PF01266	DAO	0.72
PF08447	PAS_3	0.72
PF01906	YbjQ_1	0.72
PF13473	Cupredoxin_1	0.72
PF07992	Pyr_redox_2	0.72
PF07729	FCD	0.72
PF07152	YaeQ	0.72
PF13561	adh_short_C2	0.72
PF13489	Methyltransf_23	0.72
PF12694	cpYpsA	0.72
PF08281	Sigma70_r4_2	0.72
PF07495	Y_Y_Y	0.72
PF01738	DLH	0.72
PF08818	DUF1801	0.72
PF00043	GST_C	0.72
PF00270	DEAD	0.72
PF00135	COesterase	0.72
PF00561	Abhydrolase_1	0.72
PF08309	LVIVD	0.72
PF07715	Plug	0.72
PF00392	GntR	0.72
PF05199	GMC_oxred_C	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	2.17
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	1.45
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.45
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.72
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.72
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.72
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.72
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.72
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	0.72
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.72
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.72
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.72
COG2839	Uncharacterized conserved protein YqgC, DUF456 family	Function unknown [S]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.72
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.72
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.72
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.72
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.58 %
Unclassified	root	N/A	27.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.25 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.90 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.45 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.72 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.72 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.45 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.72 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.72 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.72 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.72 %
SAR86 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	0.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.45 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → environmental samples	0.72 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.72 %
Burkholderiales bacterium PBB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB5	0.72 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.72 %
unclassified Alteromonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae	0.72 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.72 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.45 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.72 %
uncultured Thiotrichaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → environmental samples → uncultured Thiotrichaceae bacterium	0.72 %
Alteromonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium	0.72 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.72 %
Burkholderiales bacterium PBB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB5	0.72 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.72 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.45 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.45 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.72 %
uncultured Thiotrichaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → environmental samples → uncultured Thiotrichaceae bacterium	0.72 %
Alteromonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium	0.72 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.72 %
Burkholderiales bacterium PBB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB5	0.72 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.72 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10031161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300001593\|JGI12635J15846_10416245	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300002245\|JGIcombinedJ26739_100020875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5636	Open in IMG/M
3300002245\|JGIcombinedJ26739_100393435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300002245\|JGIcombinedJ26739_101508896	Not Available	567	Open in IMG/M
3300004091\|Ga0062387_100439208	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300004152\|Ga0062386_100298827	Not Available	1283	Open in IMG/M
3300005165\|Ga0066869_10106924	Not Available	566	Open in IMG/M
3300005434\|Ga0070709_11341483	Not Available	578	Open in IMG/M
3300005537\|Ga0070730_10350298	Not Available	961	Open in IMG/M
3300005602\|Ga0070762_10346290	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005602\|Ga0070762_10843161	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005650\|Ga0075038_11075488	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005921\|Ga0070766_10245006	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005949\|Ga0066791_10094397	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300005993\|Ga0080027_10011173	All Organisms → cellular organisms → Bacteria → Proteobacteria	3213	Open in IMG/M
3300005994\|Ga0066789_10001864	All Organisms → cellular organisms → Bacteria	9189	Open in IMG/M
3300006059\|Ga0075017_100022431	All Organisms → cellular organisms → Bacteria	4110	Open in IMG/M
3300006176\|Ga0070765_101772187	Not Available	579	Open in IMG/M
3300006893\|Ga0073928_10237482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1402	Open in IMG/M
3300007265\|Ga0099794_10237118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	939	Open in IMG/M
3300009038\|Ga0099829_10767992	Not Available	801	Open in IMG/M
3300009143\|Ga0099792_11239300	Not Available	507	Open in IMG/M
3300009633\|Ga0116129_1002895	All Organisms → cellular organisms → Bacteria → Proteobacteria	8492	Open in IMG/M
3300009650\|Ga0105857_1241669	Not Available	537	Open in IMG/M
3300009759\|Ga0116101_1106107	Not Available	657	Open in IMG/M
3300010159\|Ga0099796_10116829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1021	Open in IMG/M
3300010876\|Ga0126361_10017578	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010876\|Ga0126361_10682521	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300010880\|Ga0126350_10958856	Not Available	599	Open in IMG/M
3300011120\|Ga0150983_11290989	Not Available	917	Open in IMG/M
3300011120\|Ga0150983_15721580	Not Available	665	Open in IMG/M
3300012205\|Ga0137362_10247098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1541	Open in IMG/M
3300012351\|Ga0137386_10487381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	888	Open in IMG/M
3300012361\|Ga0137360_10972459	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300012363\|Ga0137390_10545215	Not Available	1131	Open in IMG/M
3300012924\|Ga0137413_10028610	All Organisms → cellular organisms → Bacteria → Proteobacteria	3031	Open in IMG/M
3300012924\|Ga0137413_10041395	All Organisms → cellular organisms → Bacteria → Proteobacteria	2610	Open in IMG/M
3300012924\|Ga0137413_10402990	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300012924\|Ga0137413_11116088	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012924\|Ga0137413_11661516	Not Available	524	Open in IMG/M
3300012925\|Ga0137419_10326072	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300012925\|Ga0137419_10985429	Not Available	698	Open in IMG/M
3300012927\|Ga0137416_11641281	Not Available	586	Open in IMG/M
3300012929\|Ga0137404_10036686	All Organisms → cellular organisms → Bacteria	3670	Open in IMG/M
3300012929\|Ga0137404_11312576	Not Available	667	Open in IMG/M
3300012930\|Ga0137407_10090981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2594	Open in IMG/M
3300014492\|Ga0182013_10031311	All Organisms → cellular organisms → Bacteria → Proteobacteria	4445	Open in IMG/M
3300014501\|Ga0182024_10165218	All Organisms → cellular organisms → Bacteria → Proteobacteria	3083	Open in IMG/M
3300014501\|Ga0182024_10235664	All Organisms → cellular organisms → Bacteria → Proteobacteria	2468	Open in IMG/M
3300014501\|Ga0182024_10312233	All Organisms → cellular organisms → Bacteria → Proteobacteria	2071	Open in IMG/M
3300014501\|Ga0182024_10345381	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300014838\|Ga0182030_10051101	All Organisms → cellular organisms → Bacteria → Proteobacteria	6580	Open in IMG/M
3300014838\|Ga0182030_10129970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3303	Open in IMG/M
3300015203\|Ga0167650_1014251	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300015206\|Ga0167644_1000017	All Organisms → cellular organisms → Bacteria → Proteobacteria	159020	Open in IMG/M
3300015206\|Ga0167644_1000531	All Organisms → cellular organisms → Bacteria → Proteobacteria	35542	Open in IMG/M
3300015206\|Ga0167644_1006579	All Organisms → cellular organisms → Bacteria → Proteobacteria	6320	Open in IMG/M
3300015242\|Ga0137412_10128382	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300018034\|Ga0187863_10304178	Not Available	886	Open in IMG/M
3300019256\|Ga0181508_1401011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → environmental samples → uncultured Thiotrichaceae bacterium	519	Open in IMG/M
3300019789\|Ga0137408_1090628	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300019886\|Ga0193727_1051617	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300019886\|Ga0193727_1148083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	642	Open in IMG/M
3300019890\|Ga0193728_1012470	All Organisms → cellular organisms → Bacteria → Proteobacteria	4275	Open in IMG/M
3300019890\|Ga0193728_1099746	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300019890\|Ga0193728_1239746	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300019890\|Ga0193728_1256744	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300020021\|Ga0193726_1000581	All Organisms → cellular organisms → Bacteria	37344	Open in IMG/M
3300020021\|Ga0193726_1000921	All Organisms → cellular organisms → Bacteria → Proteobacteria	26288	Open in IMG/M
3300020021\|Ga0193726_1025217	All Organisms → cellular organisms → Bacteria → Proteobacteria	2984	Open in IMG/M
3300020021\|Ga0193726_1118695	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300020021\|Ga0193726_1197360	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300020034\|Ga0193753_10174963	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300020060\|Ga0193717_1006871	All Organisms → cellular organisms → Bacteria	5858	Open in IMG/M
3300020061\|Ga0193716_1090835	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300020199\|Ga0179592_10000288	All Organisms → cellular organisms → Bacteria → Proteobacteria	20172	Open in IMG/M
3300020199\|Ga0179592_10002483	All Organisms → cellular organisms → Bacteria → Proteobacteria	7669	Open in IMG/M
3300020579\|Ga0210407_10002455	All Organisms → cellular organisms → Bacteria → Proteobacteria	15896	Open in IMG/M
3300020579\|Ga0210407_10004362	All Organisms → cellular organisms → Bacteria	11180	Open in IMG/M
3300020579\|Ga0210407_10280044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1301	Open in IMG/M
3300020579\|Ga0210407_10620060	Not Available	842	Open in IMG/M
3300020579\|Ga0210407_11087156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	607	Open in IMG/M
3300020580\|Ga0210403_10062678	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300020580\|Ga0210403_10262564	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300020580\|Ga0210403_10797094	Not Available	751	Open in IMG/M
3300020580\|Ga0210403_10871710	Not Available	712	Open in IMG/M
3300020580\|Ga0210403_11092550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	620	Open in IMG/M
3300020581\|Ga0210399_10613949	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300020581\|Ga0210399_11033442	Not Available	660	Open in IMG/M
3300020581\|Ga0210399_11131310	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300020582\|Ga0210395_10024541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4428	Open in IMG/M
3300020583\|Ga0210401_11338231	Not Available	574	Open in IMG/M
3300021168\|Ga0210406_10362227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300021178\|Ga0210408_11338182	Not Available	542	Open in IMG/M
3300021401\|Ga0210393_10000008	All Organisms → cellular organisms → Bacteria → Proteobacteria	309871	Open in IMG/M
3300021401\|Ga0210393_10114353	All Organisms → cellular organisms → Bacteria → Proteobacteria	2154	Open in IMG/M
3300021401\|Ga0210393_11167406	Not Available	620	Open in IMG/M
3300021404\|Ga0210389_10207203	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300021405\|Ga0210387_10002919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13118	Open in IMG/M
3300021407\|Ga0210383_10375502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1226	Open in IMG/M
3300021407\|Ga0210383_10577260	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300021407\|Ga0210383_10732192	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300021411\|Ga0193709_1127808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	512	Open in IMG/M
3300021420\|Ga0210394_10024136	All Organisms → cellular organisms → Bacteria	5558	Open in IMG/M
3300021420\|Ga0210394_10720992	Not Available	873	Open in IMG/M
3300021432\|Ga0210384_10434199	Not Available	1183	Open in IMG/M
3300021475\|Ga0210392_10639459	Not Available	790	Open in IMG/M
3300021475\|Ga0210392_11077401	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300021478\|Ga0210402_10809890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB5	862	Open in IMG/M
3300021478\|Ga0210402_11143221	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021559\|Ga0210409_10687617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	894	Open in IMG/M
3300022557\|Ga0212123_10503873	Not Available	785	Open in IMG/M
3300023255\|Ga0224547_1000075	All Organisms → cellular organisms → Bacteria → Proteobacteria	20871	Open in IMG/M
3300024222\|Ga0247691_1016460	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300026291\|Ga0209890_10004485	All Organisms → cellular organisms → Bacteria	5966	Open in IMG/M
3300026291\|Ga0209890_10064502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium	1324	Open in IMG/M
3300026319\|Ga0209647_1163982	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300026557\|Ga0179587_10082839	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300027176\|Ga0208992_1003605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1730	Open in IMG/M
3300027176\|Ga0208992_1029370	Not Available	730	Open in IMG/M
3300027496\|Ga0208987_1087318	Not Available	569	Open in IMG/M
3300027562\|Ga0209735_1037583	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300027565\|Ga0209219_1095532	Not Available	733	Open in IMG/M
3300027903\|Ga0209488_11019323	Not Available	571	Open in IMG/M
3300027908\|Ga0209006_10019032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6229	Open in IMG/M
3300028017\|Ga0265356_1007155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	1291	Open in IMG/M
3300031057\|Ga0170834_103831400	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031231\|Ga0170824_102558186	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031231\|Ga0170824_121914008	Not Available	866	Open in IMG/M
3300031234\|Ga0302325_12896153	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031469\|Ga0170819_12034856	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031616\|Ga0307508_10745677	Not Available	592	Open in IMG/M
3300031708\|Ga0310686_102187234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2729	Open in IMG/M
3300031708\|Ga0310686_107570363	Not Available	651	Open in IMG/M
3300031715\|Ga0307476_11412611	Not Available	506	Open in IMG/M
3300031730\|Ga0307516_10000023	All Organisms → cellular organisms → Bacteria → Proteobacteria	190971	Open in IMG/M
3300032174\|Ga0307470_10265835	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.30%
Aquatic	Environmental → Aquatic	6.52%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.86%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.45%
Peat	Environmental → Terrestrial → Peat	1.45%
Roots	Host-Associated → Plants → Roots	1.45%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.45%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.42%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.17%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.45%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.45%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100311612	3300001546	Forest Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAANNK*
JGI12635J15846_104162452	3300001593	Forest Soil	DPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLIDPEPSATNK*
JGIcombinedJ26739_1000208758	3300002245	Forest Soil	MHTHPPIDPDDPSGATGEDVREPPLPGTQRTPREEFPRKGEVVDPEPATTNK*
JGIcombinedJ26739_1003934353	3300002245	Forest Soil	MHTHPPIDPDDPSGASGEDVRXPPLPGTQGTPREEFPRKGDLVDPEPAANNK*
JGIcombinedJ26739_1015088961	3300002245	Forest Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK*
Ga0062387_1004392083	3300004091	Bog Forest Soil	MHTLPPIDPDDPGGASGEDAREPPLPGTQGTPREEFPRKADLVDPEPAASNK*
Ga0062386_1002988271	3300004152	Bog Forest Soil	PIDPDDPSGTSGEDMREPPLPGTQGAPREEFPRKGELVDPEPSATNK*
Ga0066869_101069241	3300005165	Soil	MHTHPPIDPADPSGTTGEDVREPPLPGTQGTPREEFPRKGDLVDPGPAETNK*
Ga0070709_113414831	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHTHPPIDPADPSGTTGEDVREPPLPGTQGTPREEFPRKGDLVDPGPAESNK*
Ga0070730_103502981	3300005537	Surface Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGTAQRIPRQEFPRKGDVVDPEPSHTKK*
Ga0070762_103462903	3300005602	Soil	MHTHPPIDPDDPSGTSGEDMREPPLPGSQGAPREEFPRKGELVDPEPSATNK*
Ga0070762_108431612	3300005602	Soil	VTSIDRVFSVWQYGIKELRMHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK*
Ga0075038_110754882	3300005650	Permafrost Soil	MSGEDVREPPLPGTQGSAREEFPRKGELVDPEPAATNK*
Ga0070766_102450061	3300005921	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSAT
Ga0066791_100943972	3300005949	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGSAREEFPRKGELVDPEPAATNK*
Ga0080027_100111732	3300005993	Prmafrost Soil	MHTHPPIDPDDPGGATGEDVREPPLPGTQGTPREEFPRKGDLVDHEPAATKK*
Ga0066789_100018646	3300005994	Soil	MHTHPPIDPDDPSGASGEEVREPPLPGTQGIPREEFPRKGDLVDPEPAATKK*
Ga0075017_1000224313	3300006059	Watersheds	MHTHPPIDPDDPGGTSGEDVREPPLPDTQGAPREEFPRKGDLVDPAPASTNK*
Ga0070765_1017721872	3300006176	Soil	MHTNPPIDPDDPSGTSGDELREPPLPGATQRIPREEFPRKGDIVDPEPSHTKK*
Ga0073928_102374822	3300006893	Iron-Sulfur Acid Spring	MHTHPPIDPDDPSGTSGEDLREPPLPGTQGTPREEFPRKGDLVDPEPSATNK*
Ga0099794_102371181	3300007265	Vadose Zone Soil	MHTNPPIDPDDPSGTSGDEVREPPLPGATQRIPREEFPRKGDIVDPEPSHTKK*
Ga0099829_107679921	3300009038	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGTTQRIPREEFPRTGDLVDPEPSHTKK*
Ga0099792_112393002	3300009143	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGPTQRIPREEFPRKGDIVDPEPSHTKK*
Ga0116129_100289513	3300009633	Peatland	LIDLKERCMHTHPPIDPDDPSGTSGEDVREPPLPGTQGSPREEFPRKGDLVDPEPAATNK
Ga0105857_12416691	3300009650	Permafrost Soil	MCQYGFKEHHMHTHPPIDPDDPGGTSGEDVREPPLPGTQGTPREEFPRKGDLVDHEPAATKK*
Ga0116101_11061073	3300009759	Peatland	PDDPGGNSEEDLREPPLPGTQGTPREEIPRKGDLVDPDPAHTDR*
Ga0099796_101168291	3300010159	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGATQRIPREEFPRKGDVVDPEPSHTKK*
Ga0126361_100175782	3300010876	Boreal Forest Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNTQHIPREEFPRKGDIVDPEPAATNK*
Ga0126361_106825211	3300010876	Boreal Forest Soil	SGASGEDVRGPPLPGTQGTPREEFPRKGDLVDPEPAATNK*
Ga0126350_109588562	3300010880	Boreal Forest Soil	HDLEERLMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK*
Ga0150983_112909891	3300011120	Forest Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK*
Ga0150983_157215803	3300011120	Forest Soil	MHTHPLIDPDDPSGASGEDVREPPLPHTQGTPREEFPRKGDLVDP
Ga0137362_102470982	3300012205	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNAQHIPREEFPRKGDIVDPDPARTTK*
Ga0137386_104873811	3300012351	Vadose Zone Soil	MHTHPPIDPDDPSGPSGDEVREPPLPGTMQRIPREEIPRKGDVVDP
Ga0137360_109724592	3300012361	Vadose Zone Soil	MAVKEHHMHTHPPIDPDDPGGTSGEDVREPPLPGTQGTAREEFPRKGDLVDPEPAATNK*
Ga0137390_105452152	3300012363	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGTTQRIPREEFPRKGDLVDPEPSHTKK*
Ga0137413_100286103	3300012924	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNAQHIPREEFPRKGDLVDPEPSHTKK*
Ga0137413_100413953	3300012924	Vadose Zone Soil	MSMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK*
Ga0137413_104029903	3300012924	Vadose Zone Soil	SGDDVREPPLPGATQRIPREEFPRKGDVVDPEPSHTKK*
Ga0137413_111160881	3300012924	Vadose Zone Soil	PDDPSGPSGDEVREPPLPGTTPRIPREEFPRKGDIVDPEPSHTKK*
Ga0137413_116615163	3300012924	Vadose Zone Soil	MTMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPA
Ga0137419_103260722	3300012925	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNTQHIPREEFPRKGDIVDPDPARTTK*
Ga0137419_109854291	3300012925	Vadose Zone Soil	MTMHTHPPIDPDDPSGTSGEEVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK*
Ga0137416_116412811	3300012927	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGTTQRIPREESPRKGDIVDPEPSHTKK*
Ga0137404_100366863	3300012929	Vadose Zone Soil	MHTHPPIDPDDPGGTSGEDVREPPLPGTQGTAREEFPRKGDLVDPEPAATNK*
Ga0137404_113125761	3300012929	Vadose Zone Soil	MHTHPPIDPDDPSGPSGDEVREPPLLGTTQRMPREEFPRKGDVVDPEPSHTKK*
Ga0137407_100909812	3300012930	Vadose Zone Soil	MHTNPPIDPNDPSGPSGDDVREPPLPGATQRIPREEFPRKGDVVDPEPSHTKK*
Ga0182013_100313111	3300014492	Bog	MHTHPPIDPDDPGGTSGEDLREPPLPATQGMPREEIPRKGDLVDPDPASTDK*
Ga0182024_101652185	3300014501	Permafrost	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK*
Ga0182024_102356642	3300014501	Permafrost	MHTHPPIDPDDPGGTSGEDLREPPLPGTQGVPREEIPRKGDLVDPDPAATER*
Ga0182024_103122332	3300014501	Permafrost	MHTHPPIDPDDPSGASGEDLREPPLPGTLGMPREEFPRKGDIVDPEPAATNK*
Ga0182024_103453812	3300014501	Permafrost	MHTHPPIDPDDPSGTSGEEVREPPLPGTQGSPREEFPRKGGLVDPEPSATNK*
Ga0182030_1005110112	3300014838	Bog	MHTHPPIDPDDPSGSPGEDLREPPLPETQGTPREEFPRKGDLVDPDPAVTNK*
Ga0182030_101299703	3300014838	Bog	MHTHPPIDPDDPGGASGEDLREPPLPSTEGTPREEFPRKGDLVDPDPASTGK*
Ga0167650_10142513	3300015203	Glacier Forefield Soil	MHTHPPIDPDDPSGPSGDDVREPPLPGNTHHIPREEFPRRSDIVDPEPAKTTK*
Ga0167644_1000017131	3300015206	Glacier Forefield Soil	LFGARAYSILRTLIDLKERRMHTHPPIDPDDPSGTSGEDVREPPLPGTQGSPREEFPRKGDLVDPEPAATNK*
Ga0167644_100053125	3300015206	Glacier Forefield Soil	MHTHPPIDPDDPSGATGEDVREPPLPGTQRTPREEFPRKGEVVDPEPAATNK*
Ga0167644_10065794	3300015206	Glacier Forefield Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGTAQRIPREEFPRKGDIVDPEPSHTKK*
Ga0137412_101283822	3300015242	Vadose Zone Soil	MTMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK*
Ga0187863_103041782	3300018034	Peatland	MHTHPPIDPDDPGGNSEEDLREPPLPGTQGTPREEIPRKGDLVDPDPAHTDR
Ga0181508_14010112	3300019256	Peatland	MHTHPPIDPDDPGGVPAENLRESPLPGTRGTSREDILRKNELVDPDPADTAD
Ga0137408_10906281	3300019789	Vadose Zone Soil	LRCTPMAVKEHHMHTHPPIDPDDPGGTSGEDVREPPLLGTQGTAREEFPRKGDLVDPEPAATNK
Ga0193727_10516172	3300019886	Soil	MERRMHTHPPIDPDDPSGTSGEDMREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0193727_11480831	3300019886	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAANNK
Ga0193728_10124702	3300019890	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAANSK
Ga0193728_10997462	3300019890	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGEIVDPEPAATNK
Ga0193728_12397462	3300019890	Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNTQHIPREEFPRKGDLVDPEPSHTKK
Ga0193728_12567442	3300019890	Soil	IDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGEIVDPEPSATNK
Ga0193726_100058115	3300020021	Soil	MHTHPPIDPDDPGGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0193726_100092124	3300020021	Soil	PPIDPDDPSGTSGEDMREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0193726_10252174	3300020021	Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGNTQHIPREEFPRKGDVVDPAPARTIK
Ga0193726_11186951	3300020021	Soil	DPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGEIVDPEPAATNK
Ga0193726_11973602	3300020021	Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNTQHIPREEFPRKGDVVDPDPARTTK
Ga0193753_101749632	3300020034	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGEIVDPEPSATNK
Ga0193717_10068716	3300020060	Soil	VAFGIKERRMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATN
Ga0193716_10908352	3300020061	Soil	VEANGTKERRMHTHPPIDPDDPSGTSGEDLREPPLPGTQGTPREEFPRKGEIVDPEPAATNK
Ga0179592_1000028818	3300020199	Vadose Zone Soil	MHTHPPIDPDDPGGTSGEDVREPPLPGTQGTAREEFPRKGDLVDPEPAATNK
Ga0179592_1000248311	3300020199	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGPTQRIPREEFPRKGDIVDPEPSHTKK
Ga0210407_1000245510	3300020579	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAAHNK
Ga0210407_100043627	3300020579	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK
Ga0210407_102800442	3300020579	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210407_106200602	3300020579	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAANTK
Ga0210407_110871561	3300020579	Soil	MHTHPPIDPDDPSGATGEEVREPPLPGTQRTPREEFPRKGEVVDPEPATTNK
Ga0210403_100626781	3300020580	Soil	GARMHTHPLIDPDDPSGASGEDVREPPLPHTQGTPREEFPRKGDLVDPEPAATNK
Ga0210403_102625642	3300020580	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK
Ga0210403_107970942	3300020580	Soil	LGATPMHTNPPIDPDDPSGPSGDDVREPPWPGTTQRIPREEFPRKGDIVDPEPSHTKK
Ga0210403_108717101	3300020580	Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGTAQRIPREEFPRKGDIVDPEPSHTKK
Ga0210403_110925502	3300020580	Soil	MHTHPPIDPDDPSGATGEDVREPPLPGTQRTPREEFPRKGEVVDPEPATTNK
Ga0210399_106139492	3300020581	Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGPTLRIPREEFPRKGDIVDPEPSHTKK
Ga0210399_110334421	3300020581	Soil	EGAILYGIKESRMHTHPPIDPDDPSGTSGEDMREPPLPGSQGAPREEFPRKGELVDPEPSATNK
Ga0210399_111313102	3300020581	Soil	MHTNPPIDPDDPSGASGDEVREPPLPGTAQRIPREEFPRKGDIVDPEPSHTKK
Ga0210395_100245413	3300020582	Soil	MHTHPLIDPDDPSGASGEDVREPPLPHTQGTPREEFPRKGDLVDPEPAATNK
Ga0210401_113382311	3300020583	Soil	ADLKERRMHTHPPIDPDDPGGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210406_103622272	3300021168	Soil	MHTNPPIDPDDPSGASGDELREPPLPGATQRIPREEFPRKGDIVDPEPSHTKK
Ga0210408_113381821	3300021178	Soil	ELRMHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK
Ga0210393_10000008196	3300021401	Soil	MHTHPPIDPDDPGGTSGEEVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210393_101143531	3300021401	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAA
Ga0210393_111674061	3300021401	Soil	SGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210389_102072033	3300021404	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK
Ga0210387_1000291914	3300021405	Soil	MHTHPPVDPDDPMGTSGEDVREPPLPGTQGTPREEFPRKGEIADPEPAAVIK
Ga0210383_103755022	3300021407	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATN
Ga0210383_105772601	3300021407	Soil	IDPDDPSGPSGDEVREPPLPGTAQRVPREEFPRKGEIVDPEPSHTKK
Ga0210383_107321921	3300021407	Soil	DPSGPSGDDVREPPLPGPTLRIPREEFPRKGEIVDPEPSHTKK
Ga0193709_11278082	3300021411	Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPE
Ga0210394_100241367	3300021420	Soil	MHTHPLIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210394_107209922	3300021420	Soil	MHTHPPIDPDDPSGTSGEDMREPPLPGSQGAPREEFPRKGELVDPEPSATNK
Ga0210384_104341991	3300021432	Soil	QGARMHTHPLIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLVDPEPSATNK
Ga0210392_106394591	3300021475	Soil	MHTNPPIDPDDPGGATGEDVREPPLPETQGTPREEFPRKGDLVDPEPAATHK
Ga0210392_110774011	3300021475	Soil	THPPIDPDDPSGASREDVREPPLPGTQGTPREEFPRKGDLVDPEPAAHNK
Ga0210402_108098901	3300021478	Soil	MHTHPPIDPDDPSGTSGEDVRELPLPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0210402_111432211	3300021478	Soil	DPDDPSGATGEEVREPPLPGTQRTPREEFPRKGEVVDPEPATTNK
Ga0210409_106876173	3300021559	Soil	MHTHPLIDPDDPSGASGEDVREPPLPHTQGTPREEFPRKGDLVDPEPAATN
Ga0212123_105038732	3300022557	Iron-Sulfur Acid Spring	MHTHPPIDPDDPSGTSGEDLREPPLPGTQGTPREEFPRKGDLVDPEPSATNK
Ga0224547_10000754	3300023255	Soil	MHTHPPIDPDDPSGASGEDLREPQLPGTLGMPREEFPRKGDIVDPEPAATNK
Ga0247691_10164602	3300024222	Soil	MTLGTLLKERRMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK
Ga0209890_100044853	3300026291	Soil	MHTHPPIDPDDPSGASGEEVREPPLPGTQGIPREEFPRKGDLVDPEPAATKK
Ga0209890_100645022	3300026291	Soil	MHTHPPIDPDDPGGATGEDVREPPLPGTQGTPREEFPRKGDLVDHEPAATKK
Ga0209647_11639822	3300026319	Grasslands Soil	MHTNPPIDPDDPSGTSGDDVREPPLPGATQRIPREEFPRKGDIVDPEPSHTKK
Ga0179587_100828392	3300026557	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGNTQHIPREEFPRKGDIVDPDPARTTK
Ga0208992_10036053	3300027176	Forest Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGEILDPEPASINK
Ga0208992_10293702	3300027176	Forest Soil	MHTHPPIDPDDPGGASGEDVREPPLPGTQGTPREEFPRKGEIMDPEPSTTEK
Ga0208987_10873181	3300027496	Forest Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDPVDPEPAATNK
Ga0209735_10375831	3300027562	Forest Soil	MHTHPPIDPDDPSGASGEDVREPPLPGTQGTPREEFPRKGDLIDPEPSATNK
Ga0209219_10955322	3300027565	Forest Soil	MHTHPPIDPDDPGGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPASTNK
Ga0209488_110193232	3300027903	Vadose Zone Soil	MHTNPPIDPDDPSGPSGDDVREPPLPGATQRIPREEFPRKGDVVDPEPSHTKK
Ga0209006_100190324	3300027908	Forest Soil	MRHDLEERLMHTHPPIDPDDPSGTSGEDVREPPLPGTQGSPREEFPRKGDLVDPEPAATN
Ga0265356_10071552	3300028017	Rhizosphere	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFARKGDLVDPEPAATNK
Ga0170834_1038314003	3300031057	Forest Soil	MHTNPPIDPDDPSGPSGDEVREPPLPGTAQRIPREEFPRKGEIVDPEPSHTKK
Ga0170824_1025581863	3300031231	Forest Soil	SGDEVREPPLPGTAQRIPREEFPRKGEIVDPEPSHTKK
Ga0170824_1219140082	3300031231	Forest Soil	MHTHPPIDPDDPGGASGEDVREPPVPGTQGTPREEFPRKGDLVDPEPAATNK
Ga0302325_128961532	3300031234	Palsa	MHTHPPIDPDDPSGASGEDLREPPLPDTQGTPREEFPRKGEIVDPEPSATKK
Ga0170819_120348562	3300031469	Forest Soil	MHTHPPIDPDDPGGPSGDEVREPPLPGNTQHVPREDFPRKGEIVDPEPAKTTK
Ga0307508_107456772	3300031616	Ectomycorrhiza	MHTHPPIDPDDPGGTSGEDLREPPLPGTEGTPREEFPRKGDLVDPDPANTDK
Ga0310686_1021872343	3300031708	Soil	MHTHPPIDPDDPSGTSGEEVREPPLPGTQGTPREEFPRKGDLVDPDPPATNK
Ga0310686_1075703632	3300031708	Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAVTNR
Ga0307476_114126112	3300031715	Hardwood Forest Soil	MHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPE
Ga0307516_10000023163	3300031730	Ectomycorrhiza	MHTHPPIDPDDPSGPSGDEVREPPLLGTTQRMPREEFPRKGDVVDPEPSHTKK
Ga0307470_102658352	3300032174	Hardwood Forest Soil	LGRWVSHTSIPPMTLGTLLKERRMHTHPPIDPDDPSGTSGEDVREPPLPGTQGTPREEFPRKGDLVDPEPAATKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences