Metagenome / Metatranscriptome Family F055866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	62 residues
Representative Sequence	DGVSVIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Number of Associated Samples	126
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.72 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	94.20 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.623 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (19.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 16.09% Coil/Unstructured: 83.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03320	FBPase_glpX	86.96
PF14030	DUF4245	4.35
PF02687	FtsX	1.45
PF02601	Exonuc_VII_L	1.45
PF12077	DUF3556	0.72
PF03631	Virul_fac_BrkB	0.72
PF04851	ResIII	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	86.96
COG1570	Exonuclease VII, large subunit	Replication, recombination and repair [L]	1.45
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
All Organisms	root	All Organisms	46.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
cellular organisms	root	All Organisms → cellular organisms	46.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.61 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	14.49 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.80 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.90 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	7.97 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5.80 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	2.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.45 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	5.07 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	2.90 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1.45 %
Pseudoclavibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter	0.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples	5.07 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	2.90 %
unclassified Pseudoclavibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter	0.72 %
Nonomuraea coxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	0.72 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.62 %
uncultured Microbacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	5.07 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	2.90 %
Pseudoclavibacter sp. 8L	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	0.72 %
Nonomuraea coxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	0.72 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01D607J	Not Available	539	Open in IMG/M
3300004152\|Ga0062386_101067899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	670	Open in IMG/M
3300005165\|Ga0066869_10053062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	719	Open in IMG/M
3300005172\|Ga0066683_10833195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005175\|Ga0066673_10338249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300005338\|Ga0068868_102122349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005356\|Ga0070674_100120851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1939	Open in IMG/M
3300005540\|Ga0066697_10541274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005558\|Ga0066698_10957907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300005560\|Ga0066670_10363729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300005564\|Ga0070664_100039154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	3993	Open in IMG/M
3300005921\|Ga0070766_10344462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300005952\|Ga0080026_10232376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300006028\|Ga0070717_11744716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300006050\|Ga0075028_100784425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300006162\|Ga0075030_100626618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300006176\|Ga0070765_102242559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	509	Open in IMG/M
3300006871\|Ga0075434_100857690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300006893\|Ga0073928_10183922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1651	Open in IMG/M
3300009012\|Ga0066710_103814699	Not Available	565	Open in IMG/M
3300009089\|Ga0099828_10441264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1174	Open in IMG/M
3300009092\|Ga0105250_10382503	Not Available	621	Open in IMG/M
3300009098\|Ga0105245_10753864	Not Available	1009	Open in IMG/M
3300009672\|Ga0116215_1254476	Not Available	768	Open in IMG/M
3300010046\|Ga0126384_10603013	Not Available	961	Open in IMG/M
3300010341\|Ga0074045_10713658	Not Available	636	Open in IMG/M
3300010366\|Ga0126379_10736131	Not Available	1082	Open in IMG/M
3300010379\|Ga0136449_104525437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300010876\|Ga0126361_10597373	Not Available	561	Open in IMG/M
3300011120\|Ga0150983_10285100	Not Available	551	Open in IMG/M
3300012096\|Ga0137389_10524332	Not Available	1017	Open in IMG/M
3300012209\|Ga0137379_11190298	Not Available	668	Open in IMG/M
3300012211\|Ga0137377_10659110	Not Available	982	Open in IMG/M
3300012351\|Ga0137386_11315113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300012925\|Ga0137419_10211089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1443	Open in IMG/M
3300013104\|Ga0157370_12069634	Not Available	510	Open in IMG/M
3300013297\|Ga0157378_10122224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2401	Open in IMG/M
3300014654\|Ga0181525_10762824	Not Available	545	Open in IMG/M
3300014969\|Ga0157376_10119133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2336	Open in IMG/M
3300015357\|Ga0134072_10443606	Not Available	522	Open in IMG/M
3300016270\|Ga0182036_11456403	Not Available	574	Open in IMG/M
3300016422\|Ga0182039_10536597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1015	Open in IMG/M
3300016422\|Ga0182039_12151558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300017946\|Ga0187879_10258335	Not Available	970	Open in IMG/M
3300017955\|Ga0187817_11035425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	526	Open in IMG/M
3300017974\|Ga0187777_10750106	Not Available	695	Open in IMG/M
3300018033\|Ga0187867_10414538	Not Available	745	Open in IMG/M
3300018043\|Ga0187887_10114528	Not Available	1620	Open in IMG/M
3300020078\|Ga0206352_10077247	Not Available	516	Open in IMG/M
3300020579\|Ga0210407_10947169	Not Available	658	Open in IMG/M
3300021171\|Ga0210405_11389043	Not Available	512	Open in IMG/M
3300021180\|Ga0210396_10889521	Not Available	760	Open in IMG/M
3300021181\|Ga0210388_10835975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	796	Open in IMG/M
3300021374\|Ga0213881_10015529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3123	Open in IMG/M
3300021374\|Ga0213881_10126634	Not Available	1113	Open in IMG/M
3300021374\|Ga0213881_10385631	Not Available	630	Open in IMG/M
3300021377\|Ga0213874_10231327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300021401\|Ga0210393_10816683	Not Available	758	Open in IMG/M
3300021407\|Ga0210383_10726920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	852	Open in IMG/M
3300021477\|Ga0210398_10653105	Not Available	852	Open in IMG/M
3300021478\|Ga0210402_10096758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2645	Open in IMG/M
3300021478\|Ga0210402_10600073	Not Available	1020	Open in IMG/M
3300022467\|Ga0224712_10102692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300022734\|Ga0224571_111117	Not Available	627	Open in IMG/M
3300024055\|Ga0247794_10037063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → unclassified Pseudoclavibacter → Pseudoclavibacter sp. 8L	1290	Open in IMG/M
3300024271\|Ga0224564_1030967	Not Available	1004	Open in IMG/M
3300024284\|Ga0247671_1094086	Not Available	507	Open in IMG/M
3300025634\|Ga0208589_1079107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	791	Open in IMG/M
3300025900\|Ga0207710_10594262	Not Available	578	Open in IMG/M
3300025905\|Ga0207685_10343284	Not Available	751	Open in IMG/M
3300025913\|Ga0207695_10241467	Not Available	1708	Open in IMG/M
3300026316\|Ga0209155_1194608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	642	Open in IMG/M
3300026494\|Ga0257159_1092861	Not Available	526	Open in IMG/M
3300026498\|Ga0257156_1076565	Not Available	693	Open in IMG/M
3300027504\|Ga0209114_1040510	Not Available	804	Open in IMG/M
3300027523\|Ga0208890_1002635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1949	Open in IMG/M
3300027765\|Ga0209073_10145278	Not Available	872	Open in IMG/M
3300027787\|Ga0209074_10473528	Not Available	539	Open in IMG/M
3300027884\|Ga0209275_10048516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2032	Open in IMG/M
3300027889\|Ga0209380_10283130	Not Available	974	Open in IMG/M
3300028715\|Ga0307313_10025199	Not Available	1646	Open in IMG/M
3300028718\|Ga0307307_10024314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1693	Open in IMG/M
3300028747\|Ga0302219_10375219	Not Available	556	Open in IMG/M
3300028806\|Ga0302221_10390071	Not Available	607	Open in IMG/M
3300029943\|Ga0311340_10751874	Not Available	828	Open in IMG/M
3300029943\|Ga0311340_11369107	Not Available	560	Open in IMG/M
3300029944\|Ga0311352_10421855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300029997\|Ga0302302_1069733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1494	Open in IMG/M
3300029999\|Ga0311339_10309722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1693	Open in IMG/M
3300030043\|Ga0302306_10126755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	987	Open in IMG/M
3300030046\|Ga0302305_1208129	Not Available	706	Open in IMG/M
3300030054\|Ga0302182_10137179	Not Available	1062	Open in IMG/M
3300030058\|Ga0302179_10150385	Not Available	1028	Open in IMG/M
3300030399\|Ga0311353_10566440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	997	Open in IMG/M
3300030509\|Ga0302183_10113890	Not Available	1065	Open in IMG/M
3300030743\|Ga0265461_11985851	Not Available	662	Open in IMG/M
3300030906\|Ga0302314_10481223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1342	Open in IMG/M
3300031236\|Ga0302324_101402515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	914	Open in IMG/M
3300031236\|Ga0302324_103299797	Not Available	528	Open in IMG/M
3300031561\|Ga0318528_10189121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1100	Open in IMG/M
3300031680\|Ga0318574_10126421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1438	Open in IMG/M
3300031708\|Ga0310686_101693412	Not Available	583	Open in IMG/M
3300031708\|Ga0310686_106089034	Not Available	918	Open in IMG/M
3300031708\|Ga0310686_117330786	Not Available	619	Open in IMG/M
3300031724\|Ga0318500_10024277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2358	Open in IMG/M
3300031736\|Ga0318501_10745666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300031778\|Ga0318498_10289548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	736	Open in IMG/M
3300031805\|Ga0318497_10439408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	730	Open in IMG/M
3300031832\|Ga0318499_10248200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	691	Open in IMG/M
3300031879\|Ga0306919_10293615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1232	Open in IMG/M
3300031910\|Ga0306923_11530897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	696	Open in IMG/M
3300031940\|Ga0310901_10538641	Not Available	528	Open in IMG/M
3300031946\|Ga0310910_10246962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1395	Open in IMG/M
3300031946\|Ga0310910_11053308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	634	Open in IMG/M
3300032001\|Ga0306922_11218316	Not Available	765	Open in IMG/M
3300032009\|Ga0318563_10292640	Not Available	880	Open in IMG/M
3300032055\|Ga0318575_10016917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	2971	Open in IMG/M
3300032063\|Ga0318504_10214293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300032065\|Ga0318513_10296047	Not Available	786	Open in IMG/M
3300032067\|Ga0318524_10470551	Not Available	658	Open in IMG/M
3300032068\|Ga0318553_10238802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300032074\|Ga0308173_10257788	Not Available	1480	Open in IMG/M
3300032076\|Ga0306924_11800457	Not Available	638	Open in IMG/M
3300032076\|Ga0306924_12009129	Not Available	596	Open in IMG/M
3300032205\|Ga0307472_100799258	Not Available	861	Open in IMG/M
3300032205\|Ga0307472_101329655	Not Available	693	Open in IMG/M
3300032261\|Ga0306920_102321607	Not Available	743	Open in IMG/M
3300032421\|Ga0310812_10431994	Not Available	593	Open in IMG/M
3300032515\|Ga0348332_10960883	Not Available	1002	Open in IMG/M
3300032782\|Ga0335082_10796021	Not Available	807	Open in IMG/M
3300032829\|Ga0335070_11612854	Not Available	590	Open in IMG/M
3300032896\|Ga0335075_11558539	Not Available	546	Open in IMG/M
3300032897\|Ga0335071_10258291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1695	Open in IMG/M
3300032898\|Ga0335072_10608274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1096	Open in IMG/M
3300032955\|Ga0335076_10577536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1006	Open in IMG/M
3300033289\|Ga0310914_10288534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → environmental samples → uncultured Microbacterium sp.	1478	Open in IMG/M
3300033289\|Ga0310914_10985764	Not Available	743	Open in IMG/M
3300034124\|Ga0370483_0152308	Not Available	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.86%
Host-Associated	Host-Associated	9.42%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	9.42%
Aquatic	Environmental → Aquatic	6.52%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.84%
Peat	Environmental → Terrestrial → Peat	11.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.97%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.17%
Sediment	Environmental → Aquatic → Sediment	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Roots	Host-Associated → Plants → Roots	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.25%
Loam	Environmental → Terrestrial → Soil → Loam	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.17%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_01489300	2170459015	Switchgrass, Maize And Mischanthus Litter	SGHMVLGRKRGGTAPPAGPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRG
Ga0062386_1010678991	3300004152	Bog Forest Soil	FTQAILQASRVQVYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGGTPPPAGPAMPVIEVKALVLGGELTVRTPPKPRRFRLFSRN*
Ga0066869_100530621	3300005165	Soil	LQTSRVQLYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGGTTPPAGPGSPVIEVKALVLGGELSVRTPPKSRRFRLFSRN*
Ga0066683_108331952	3300005172	Soil	RLIVPDGVSVIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0066673_103382492	3300005175	Soil	LGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0068868_1021223491	3300005338	Miscanthus Rhizosphere	MVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0070674_1001208511	3300005356	Miscanthus Rhizosphere	VSVIVSGHMVLGRKRGGTAPPAAPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0066697_105412742	3300005540	Soil	VSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS*
Ga0066698_109579071	3300005558	Soil	VSGHMVLGRKRGGTPPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN*
Ga0066670_103637291	3300005560	Soil	VIVSGHMVLGRKRGSTPPPLWPGDPVIEVKALVLGGEVAVRTPPKSRRFRLFSRN*
Ga0070664_1000391541	3300005564	Corn Rhizosphere	RLRLIVPDGVSVIVSGHMVLGRKRGGTAPPAAPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0070766_103444621	3300005921	Soil	LIVPEGVSVIVSGHMVLGRKRGSTGPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRN*
Ga0080026_102323761	3300005952	Permafrost Soil	VFGGRLRLIVPDGVSVIVSGHMVLGRQRGGTPPPLGPGDPVIEVKALVLGGELAVRTPPKSRRFRLFSRN*
Ga0070717_117447162	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSGHMVLGRKRGSTPPPTGPGAPVIEVKALVLGGELDVRTPRKNRRFRLFSRD*
Ga0075028_1007844252	3300006050	Watersheds	SVIVSGHMVLGRKRGRTPPPGGPGTPVIEVRALVLGGELDVRTPPKNRRFRLFSRNLLLISRS*
Ga0075030_1006266182	3300006162	Watersheds	VIVSGHMVLGRKRGRTPPPAGPGTPVIEVKALVLGGELSVRTPPKSRRFRLFSRN*
Ga0070765_1022425591	3300006176	Soil	TVVGGRLRLFVPDGVSVIVSGHLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPKSRRFRLFGRRQDPPGLSRS*
Ga0075434_1008576901	3300006871	Populus Rhizosphere	LIVPDGVSVIVSGHMVLGRKRGSTPPPASPGTPVIEVKALVLGGELAVRTPPKNRRFRLFSRS*
Ga0073928_101839221	3300006893	Iron-Sulfur Acid Spring	IVLYATVVGGRLRLSVPDGVSVIVTGHLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPRNRRFRLFGRRQDPPGLSRS*
Ga0066710_1038146991	3300009012	Grasslands Soil	VFGGRLRLIVPGGVSVIVSGHMVLGRKRGGTAPPAGPGSPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0099828_104412642	3300009089	Vadose Zone Soil	GRLRLIVPDGVSVLVSGHMVLGRKRGSTPPAGPGTPVIEVKALVLGGELAVRTPPRNRRFRLFSRS*
Ga0105250_103825032	3300009092	Switchgrass Rhizosphere	SGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0105245_107538641	3300009098	Miscanthus Rhizosphere	SVIVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN*
Ga0116215_12544762	3300009672	Peatlands Soil	GRKRGVPKTPPGSVPAAVIEVRALVLGGEVIVRTPPRPRRFRLFSRS*
Ga0126384_106030132	3300010046	Tropical Forest Soil	LGRKRGGTAPPAGPGTPVIEVKALVLGGELAVRTPPKGRRFRLFSRG*
Ga0074045_107136582	3300010341	Bog Forest Soil	VPDGVSVIVSGHMVLGRKRGRTPPPTDPGTPVIEVRALVLGGELDIRTPPKNRRFRLFSRN*
Ga0126379_107361312	3300010366	Tropical Forest Soil	RLIVPDGVSVIVSGHMVLGRRRGGTPPAAGPDSPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0136449_1045254371	3300010379	Peatlands Soil	LRLIVPDGVSVIVSGHMVLGRKRGSTAPPAGPGTPVIEVKALVLGGELDVRTPRKNRRFRLFSRD*
Ga0126361_105973731	3300010876	Boreal Forest Soil	IGGRLRLSVPDGVSVVVNAPVVLGRRRGGTPLPASSETPVIEVKGMVLGGEIIVRTPPKVRRFRLFGGRR*
Ga0150983_102851001	3300011120	Forest Soil	IVSGHMVLGRKRGRTPPPAGPGTPVIEVKALVLGGELSVRTPPKSRRFRWWGVPGGSSPRG*
Ga0137389_105243322	3300012096	Vadose Zone Soil	IVPDGVSVVVSGHMVLGRKRGSTPPAGPGTPVIEVKALVLGGELAVRTPPKTRRFRLFSRS*
Ga0137379_111902982	3300012209	Vadose Zone Soil	LRLIVPDGVSVVVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN*
Ga0137377_106591102	3300012211	Vadose Zone Soil	PDGVSVVVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN
Ga0137386_113151132	3300012351	Vadose Zone Soil	GRLRLIVPDGVSVLVSGHMVLGRKRGSTPPAGPGTPVIEVKALVLGGELAVRTPPKTRRFRLFSRS*
Ga0137419_102110892	3300012925	Vadose Zone Soil	PDGVSVIVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0157370_120696342	3300013104	Corn Rhizosphere	GVSVIVSGHMVLGRKRGGTATPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0157378_101222244	3300013297	Miscanthus Rhizosphere	VLGRKRGGTAPPAAPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0181525_107628242	3300014654	Bog	VPDGVSVVVSGHLVLGRKRGGTPPPASSDTPLIEVKGLVLGGEIIVRTPPRSRRFRLFGSRR*
Ga0157376_101191334	3300014969	Miscanthus Rhizosphere	GVSVIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG*
Ga0134072_104436061	3300015357	Grasslands Soil	MVLGRKRGGTPPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN*
Ga0182036_114564032	3300016270	Soil	VSVMVSGHMVLGRKRGSTAPPAGPGAPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0182039_105365972	3300016422	Soil	LIVPDGVSVIVSGHMVLGRRRGGTPPAAGPDTPVIEVRALVLGGELAVRTPPKNRRFRLFSRN
Ga0182039_121515582	3300016422	Soil	ATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGRTAPPAGPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0187879_102583352	3300017946	Peatland	VFGGRLRLIVPDGVSVIVSGHMVLGRKRGSTPPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRN
Ga0187817_110354251	3300017955	Freshwater Sediment	VVGGRLRLIVPDGVSVIMAGHVMLGRRRGGTPPPAGPDTPVIEVKALVLGGEVIVRTPPRTRRFRLFGRR
Ga0187777_107501061	3300017974	Tropical Peatland	MVLGRKRGSTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0187867_104145382	3300018033	Peatland	HMVLGRKRGSTPPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRNL
Ga0187887_101145282	3300018043	Peatland	GVSVIVSGHMVLGRKRGSTPPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRN
Ga0206352_100772472	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LIVPDGVSVIVSGHMVLGRQRGSTPPASADTPVIEVKALVLGGELAVRTPPKSRRFRLFSRG
Ga0210407_109471691	3300020579	Soil	VSVIVSGHMVLGRKRGGTPAPADPGAPVIEVKALVLGGELSVRTPPKSRRFRLFSRN
Ga0210405_113890431	3300021171	Soil	SVIVSGHMVLGRKRGSTPRPAGPDTPVIEVRALVLGGELDVRTPPKNRRFRLFSRNLLLISRS
Ga0210396_108895212	3300021180	Soil	IVSGHMVLGRKRGGTPPAGPDAPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0210388_108359752	3300021181	Soil	IVLYATVVGGRLRLFVPDGVSVIVSGHLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPKSRRFRLFGRRQDPPGLSRS
Ga0213881_100155294	3300021374	Exposed Rock	YATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGSTPPPAGSGAPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0213881_101266341	3300021374	Exposed Rock	GVSVIVSGHMVLGRQRGSTPPAGAGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0213881_103856311	3300021374	Exposed Rock	VQLYATVFGGRLRVVVPDGVSVIVSGHMVLGRRRGSTPQAGPGTPVIEVKALVLGGELVVRTPPKNRRFRWWGMPGGSSPRG
Ga0213874_102313271	3300021377	Plant Roots	GRLRLIVPEGVSVIVSGHMVLGRKRGGTPPPPGPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0210393_108166831	3300021401	Soil	VIVSGHLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPKTRRFRLFGRRQNPPLSRS
Ga0210383_107269202	3300021407	Soil	YATVVGGRLRLFVPDGVSVIVSGHLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPKSRRFRLFGRRQDPPGLSRS
Ga0210398_106531052	3300021477	Soil	HLVLGRRRGSTPLPGPDTPVIEVKGLVLGGEVIVRTPPKSRRFRLFGRRQDPPGLSRS
Ga0210402_100967581	3300021478	Soil	SGHMVLGRKRGSTAPPAGPGAPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0210402_106000732	3300021478	Soil	SGHMVLGRKRGGTPPVGPGAPVIEVKALVLGGELSVRTPPKTRRFRLFSRN
Ga0224712_101026923	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0224571_1111172	3300022734	Rhizosphere	VSGHMVLGSKRGSTPRPAGPGTPVIEVKALVLGGELDVRTPPKNRRFRLFSRNLLLISRS
Ga0247794_100370631	3300024055	Soil	GHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRSPPKSRRFRLFSRG
Ga0224564_10309672	3300024271	Soil	KRGSTPRPAGPGTPVIEVKALVLGGELDVRTPPKNRRFRLFSRNLLLISRS
Ga0247671_10940861	3300024284	Soil	MVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0208589_10791071	3300025634	Arctic Peat Soil	RHVQLHATVIGGRLRLIVPDGVSVVVTAPLVLGRRRGGTPLPAGTETPVIEVKGLVLGGEIIVRTPPKPRRFRLFGGRRER
Ga0207710_105942622	3300025900	Switchgrass Rhizosphere	VLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRD
Ga0207685_103432841	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RLIVPDGVSVIVSGHMVLGRKRGGTAPPTGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN
Ga0207695_102414671	3300025913	Corn Rhizosphere	RLRLIVPEGVSVIVSGHMVLGRKRGGTAPPAGPDAPVIEVKALVLGGELAVRTPPKSRRFRLFSRG
Ga0209155_11946082	3300026316	Soil	LGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0257159_10928611	3300026494	Soil	VPDGVSVIVSGHMVLGRKRGGTAPPAGPDSPVIEVKALVLGGELTVRTPPKSRRFRLFSR
Ga0257156_10765652	3300026498	Soil	GHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELTVRTPPKSRRFRLFSRG
Ga0209114_10405102	3300027504	Forest Soil	DGVQVVVSGHMVLGRQRGRTDPAAPQAAVIEVKALVLGGELKVVAPPKNRRFRLFSRS
Ga0208890_10026353	3300027523	Soil	MVLGRKRGGTAPPAGPGTPVIEVRALVLGGELTVRTPPKSRRFRLFSRG
Ga0209073_101452781	3300027765	Agricultural Soil	RLIVPDGVSVIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0209074_104735282	3300027787	Agricultural Soil	TVSGHMVLGRKRGGTAPPAAPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN
Ga0209275_100485161	3300027884	Soil	PDGVSVVVTGHVALGRRRGHTPPPAGPDTPVIDVRALVIGGELAVRTPPKSRRFRLFSRS
Ga0209380_102831302	3300027889	Soil	LIVPEGVSVIVSGHMVLGRKRGSTGPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRN
Ga0307313_100251991	3300028715	Soil	GVSVIVSGHMVLGRKRGGTAPPNGPDAPVIEVKALVLGGELDVRTPPKSRRFRLFSRG
Ga0307307_100243143	3300028718	Soil	DGVSVIVSGHMVLGRKRGGTAPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0302219_103752192	3300028747	Palsa	GHMVLGRKRGGTPPQADPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0302221_103900712	3300028806	Palsa	DGVSVIVSGHMVLGRKRGGTPPQADPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0311340_107518742	3300029943	Palsa	VSGHLVLGRKRGGTPPPASPDTPVIEVKGLVLGGEIIVRTPPRSRRFRLFGSRR
Ga0311340_113691071	3300029943	Palsa	YATVFGGRLRLTVPDGVSVIVSGHMVLGRKRGSTPPPTGPDSPVIEVKALVLGGELSVRTPPKTRRFRLFSRN
Ga0311352_104218551	3300029944	Palsa	VFGGRLRLIVPDGVSVIVSGHMVLGRKRGGTPAPAGPGSPVIEVKALVLGGELSVRTPPKPRRFRLLRRN
Ga0302302_10697331	3300029997	Palsa	ASRVQLYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGGTPPQADPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0311339_103097223	3300029999	Palsa	PDGVSVIVSGHMVLGRKRGGTPPQADPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0302306_101267552	3300030043	Palsa	IVPEGVSVIVSGHMVLGRKRGSTGPPAGPDSPVIEVKALVLGGELSVRTPPRNRRFRLFSRN
Ga0302305_12081291	3300030046	Palsa	IVPDGVSVIVSGHMVLGRKRGSTPPPAGPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0302182_101371791	3300030054	Palsa	GHMVLGRKRGSTPPPAGPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0302179_101503851	3300030058	Palsa	IVSGHMVLGRKRGGTPAPAGPGSPVIEVKALVLGGELSVRTPPKPRRFRLLRRN
Ga0311353_105664401	3300030399	Palsa	TQAILQASRVQLYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGGTPPQADPGSPVIEVKALVLGGELSVRTPPKTRRFRLFSRS
Ga0302183_101138902	3300030509	Palsa	PDGVSVIVSGHMVLGRKRGGTPAPAGPGSPVIEVKALVLGGELSVRTPPKPRRFRLLRRN
Ga0265461_119858512	3300030743	Soil	VSVVVSGHMVLGRKRGSTPPPAGPGAPVIEVKALVLGGELTVRTPPKNRRFRLFSRS
Ga0302314_104812231	3300030906	Palsa	PDGVSVVVSGHMVLGRRRGGTPPPASPNMPVIEVKALVLGGELTVRTPPKSRRFRLFSRN
Ga0302324_1014025151	3300031236	Palsa	VVSGHMVLGRRRGGTPPPTSPSTPVIEVKALVLGGELTVRTPPKSRRFRLFSRN
Ga0302324_1032997971	3300031236	Palsa	SGHMVLGRKRGSTPPPAGPGAPVIEVKALVLGGELSVRTPPKPRRFRLFSRN
Ga0318528_101891211	3300031561	Soil	VLGRKRGGTPAPAGPGAPVIEVKALVLGGELAVRTPPKSRRFRLFTRS
Ga0318574_101264213	3300031680	Soil	VMVSGHMVLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0310686_1016934122	3300031708	Soil	VIVTGRMVLGRKRGSTPAPAGPGSPVIEVKAMVLGGELTVRTPPKPRKFRLFNRS
Ga0310686_1060890341	3300031708	Soil	SGRVQVYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGSTPAPASPATPVIEVKALVLGGELDIRTPPKSRRFRLFNRT
Ga0310686_1173307861	3300031708	Soil	QAILQARRVQLYATVVGGRLRLIVPDGVSVMVTGHLVLGRRRGGTPLPASSDTPLIEVKGLILGGEVIVRTPPRSRRFRLFGSRR
Ga0318500_100242775	3300031724	Soil	MTGHAMLGSKRGGVPPPADPGTPVIEVKALVLGGQVIVRTPQKGRRFRLFSRR
Ga0318501_107456661	3300031736	Soil	VYATVFGGRLRLIVPDGVSVIVSGHMVLGRKRGSTAPAGAGTPVIEVKALVLGGELAVRTPPKNRRFRLFSRN
Ga0318498_102895481	3300031778	Soil	LYATVIGGRLRLIVPDGVSVAVTGHLVLGRRRGGTAPPASSDTPLIEVKGMVLGGEVIVRTPPRSRRFRLFGGRRRPINRS
Ga0318497_104394082	3300031805	Soil	VDFTQAILQARHVQLYATVIGGRLRLIVPDGVSVAVTGHLVLGRRRGGTASPASSDTPLIEVKGMVLGGEVIVRTPPRSRRFRLFGGRRRPINRS
Ga0318499_102482001	3300031832	Soil	VQLYATVIGGRLRLIVPDGVSVAVTGHLVLGRRRGGTAPPASSDTPLIEVKGMVLGGEVIVRTPPRSRRFRLFGGRRRPINRS
Ga0306919_102936151	3300031879	Soil	MVLGRKRGSTGPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLWGGLGGSSPRG
Ga0306923_115308971	3300031910	Soil	VIGGRLRLIVPDGVSVAVTGHLVLGRRRGGTAPPASSDTPLIEVKGMVLGGEVIVRTPPRSRRFRLFGGRRRPINRS
Ga0310901_105386411	3300031940	Soil	VSVIVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN
Ga0310910_102469621	3300031946	Soil	VLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLWGGLGGSSPRG
Ga0310910_110533082	3300031946	Soil	TVIGGRLRLIVPDGVSVAVTGHLVLGRRRGGTAPPASSDTPLIEVKGMVLGGEVIVRTPPRSRRFRLFGGRRRPINRS
Ga0306922_112183161	3300032001	Soil	IVPDGVSVMVSGHMVLGRKRGSTPPPGGPGAPVIEVRALVLGGELAVRTPPKNRRFRLFSRN
Ga0318563_102926402	3300032009	Soil	DGVSVMVSGHMVLGRKRGSTPPPAGPGAPVIEVRALVLGGELSVRTPPKNRRFRLFSRS
Ga0318575_100169175	3300032055	Soil	MTGHAMLGSKRGGTPPAADPGTPVIEVKALVLGGQVIVRTPPKSRRFRLFSRR
Ga0318504_102142932	3300032063	Soil	LTVPDGVSVMVTGHAMLGSKRGGTPPPADPGTPVIEVKALVLGGQVIVRTPQKGRRFRLFSRR
Ga0318513_102960472	3300032065	Soil	DGVSVMMAGHVVLGRRRGGTMPPTGPDTPLIEVKALVLGGEVIVRSPPRARRFRLFGRR
Ga0318524_104705511	3300032067	Soil	LRLIVPDGVSVMVSGHMVLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0318553_102388022	3300032068	Soil	LRLIVPDGVSVIVSGHMVLGRKRGRTAPPAGPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0308173_102577881	3300032074	Soil	VLGRKRGGTAPPAGPGSPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0306924_118004572	3300032076	Soil	IVPDGVSVMVSGHMVLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0306924_120091292	3300032076	Soil	DGVAVIVSGHMVLGRRRGSTPPPPGPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRS
Ga0307472_1007992582	3300032205	Hardwood Forest Soil	SVIVSGHMVLGRKRGGTAPPAGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRN
Ga0307472_1013296551	3300032205	Hardwood Forest Soil	TPPPPGPDTPVIEVRALVLGGELAVRTPPKSRRFRLWGGLGGSSPRG
Ga0306920_1023216071	3300032261	Soil	VSVMMSGHMVLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSRS
Ga0310812_104319941	3300032421	Soil	MVLGRKRGGTVPPAGPGTPVIEVRALVLGGELAVRTPPKSRRFRLFSRG
Ga0348332_109608831	3300032515	Plant Litter	DGVSVVVSGHMVLGRKRGSTPPPAGPGAPVIEVKALVLGGELTVRTPPKNRRFRLFGRS
Ga0335082_107960211	3300032782	Soil	LRLIVPDGVSVIVSGHMVLGRKRGGTPPPPGPDTPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0335070_116128542	3300032829	Soil	GHMVLGRKRGSTPPPASPGTPVIEVKALVLGGELAVRTPPKSRRFRLFSRN
Ga0335075_115585391	3300032896	Soil	VSGHMVLGRKRGSTPPPAGPGAPVIDVRALVLGGELAVRTPPKNRRFRLFSRG
Ga0335071_102582913	3300032897	Soil	TVFGGRLRLIVPDGVSVMVSGHMVLGRKRGSTPPPAGPDAPVIDVRALVLGGELAVRTPPKNRRFRLFSRN
Ga0335072_106082741	3300032898	Soil	LLTTVIGGRLRLIVPDGVSVDVPAHVMLGRRRGGTPPLAAADAPLIEVRGLVLGGEIIVRTPPRNRRFRLFGNRRRPRGVPGGSSPRG
Ga0335076_105775361	3300032955	Soil	EVDFTQAILQARHVRLLTTVIGGRLRLIVPDGVSVDVPAHVMLGRRRGGTPPLAAADAPLIEVRGLVLGGEIIVRTPPRNRRFRLFGNRRRPRGVPGGSSPRG
Ga0310914_102885341	3300033289	Soil	PDGVSVIVSGHMVLGRRRGGTPPAAGPDTPVIEVRALVLGGELAVRTPPKNRRFRLFSRN
Ga0310914_109857642	3300033289	Soil	VPDGVSVMVSGHMVLGRKRGGTPPPGGPGAPVIEVRALVLGGELAVRTPPKSRRFRLFSR
Ga0370483_0152308_2_211	3300034124	Untreated Peat Soil	FGGRLRLIVPDGVSVIVSGHMVLGRKRGGTPAPAGPGSPVIEVKALVLGGELSVRTPPKPRRFRLLRRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences