Metagenome / Metatranscriptome Family F055852

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	68 residues
Representative Sequence	MLPLTQTLKEKVNTLPKGGVFLCYAQENTRQRKILERVEETFREHGHAVKSMSVGEVYKTTPNF
Number of Associated Samples	90
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.90 %
% of genes near scaffold ends (potentially truncated)	61.59 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (55.072 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (22.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.61% β-sheet: 10.87% Coil/Unstructured: 56.52%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00589	Phage_integrase	14.49
PF02899	Phage_int_SAM_1	3.62
PF13676	TIR_2	2.17
PF00119	ATP-synt_A	1.45
PF02796	HTH_7	1.45
PF04352	ProQ	1.45
PF07969	Amidohydro_3	1.45
PF01850	PIN	1.45
PF01609	DDE_Tnp_1	1.45
PF04226	Transgly_assoc	1.45
PF00194	Carb_anhydrase	1.45
PF02371	Transposase_20	1.45
PF00805	Pentapeptide	1.45
PF02036	SCP2	0.72
PF00486	Trans_reg_C	0.72
PF07978	NIPSNAP	0.72
PF12770	CHAT	0.72
PF04986	Y2_Tnp	0.72
PF09335	SNARE_assoc	0.72
PF08867	FRG	0.72
PF00076	RRM_1	0.72
PF01695	IstB_IS21	0.72
PF02321	OEP	0.72
PF13271	DUF4062	0.72
PF01797	Y1_Tnp	0.72
PF13586	DDE_Tnp_1_2	0.72
PF00080	Sod_Cu	0.72
PF07681	DoxX	0.72
PF03767	Acid_phosphat_B	0.72
PF00440	TetR_N	0.72
PF14104	DUF4277	0.72
PF00856	SET	0.72
PF04343	DUF488	0.72
PF01979	Amidohydro_1	0.72
PF00496	SBP_bac_5	0.72
PF02604	PhdYeFM_antitox	0.72
PF13191	AAA_16	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	3.62
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	3.62
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	1.45
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.45
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.45
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.45
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.45
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.45
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.45
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.45
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.45
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.45
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.45
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.45
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.45
COG2503	Predicted secreted acid phosphatase	General function prediction only [R]	0.72
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.72
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.72
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.72
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.72
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.72
COG3700	Acid phosphatase, class B	Inorganic ion transport and metabolism [P]	0.72
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.72
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.72
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.72
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.07 %
Unclassified	root	N/A	44.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.12 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	5.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.45 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.72 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	18.12 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	5.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	3.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.72 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.72 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.72 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	3.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.72 %
Segnochrobactraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae	0.72 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.72 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.72 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.72 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.72 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Candidatus Woesebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	1.45 %
Candidatus Daviesbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria	1.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Segnochrobactrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae → Segnochrobactrum	0.72 %
Candidatus Amesbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Amesbacteria	0.72 %
Halorubraceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.72 %
Nitrosomonadales bacterium SCN 54-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium SCN 54-20	0.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.72 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	1.45 %
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria → Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Segnochrobactrum spirostomi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae → Segnochrobactrum → Segnochrobactrum spirostomi	0.72 %
Halorubrum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum	0.72 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.72 %
Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Amesbacteria → Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	0.72 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Nitrosomonadales bacterium SCN 54-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium SCN 54-20	0.72 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	1.45 %
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria → Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.72 %
unclassified Halorubrum	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum	0.72 %
Segnochrobactrum spirostomi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae → Segnochrobactrum → Segnochrobactrum spirostomi	0.72 %
Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Amesbacteria → Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	0.72 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Nitrosomonadales bacterium SCN 54-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium SCN 54-20	0.72 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	1.45 %
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria → Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.45 %
Halorubrum sp. Atlit-28R	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. Atlit-28R	0.72 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.72 %
Segnochrobactrum spirostomi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae → Segnochrobactrum → Segnochrobactrum spirostomi	0.72 %
Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Amesbacteria → Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	0.72 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Nitrosomonadales bacterium SCN 54-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium SCN 54-20	0.72 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_2251024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	898	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c020026	Not Available	588	Open in IMG/M
3300000858\|JGI10213J12805_10208074	Not Available	576	Open in IMG/M
3300000955\|JGI1027J12803_101233400	Not Available	843	Open in IMG/M
3300000955\|JGI1027J12803_101440143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Segnochrobactraceae → Segnochrobactrum → Segnochrobactrum spirostomi	781	Open in IMG/M
3300000955\|JGI1027J12803_104253752	Not Available	771	Open in IMG/M
3300000955\|JGI1027J12803_104936089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	674	Open in IMG/M
3300004633\|Ga0066395_10262166	Not Available	931	Open in IMG/M
3300005179\|Ga0066684_10535381	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005289\|Ga0065704_10673944	Not Available	572	Open in IMG/M
3300005294\|Ga0065705_10028601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2921	Open in IMG/M
3300005294\|Ga0065705_10137968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2231	Open in IMG/M
3300005294\|Ga0065705_10298259	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005294\|Ga0065705_10393227	Not Available	887	Open in IMG/M
3300005294\|Ga0065705_11001911	Not Available	547	Open in IMG/M
3300005295\|Ga0065707_10131867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	1906	Open in IMG/M
3300005295\|Ga0065707_10232911	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	1182	Open in IMG/M
3300005295\|Ga0065707_11131872	Not Available	509	Open in IMG/M
3300005332\|Ga0066388_105911677	Not Available	618	Open in IMG/M
3300005558\|Ga0066698_10431167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria → Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	902	Open in IMG/M
3300005560\|Ga0066670_10305545	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005560\|Ga0066670_10608912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	665	Open in IMG/M
3300005562\|Ga0058697_10065691	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005562\|Ga0058697_10118938	Not Available	1119	Open in IMG/M
3300005562\|Ga0058697_10140432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria → Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1045	Open in IMG/M
3300005576\|Ga0066708_10802476	Not Available	590	Open in IMG/M
3300005598\|Ga0066706_10144520	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300005764\|Ga0066903_101586032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1240	Open in IMG/M
3300005764\|Ga0066903_102619550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium SCN 54-20	977	Open in IMG/M
3300005764\|Ga0066903_107549896	Not Available	561	Open in IMG/M
3300006049\|Ga0075417_10230731	Not Available	883	Open in IMG/M
3300006049\|Ga0075417_10238757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	869	Open in IMG/M
3300006049\|Ga0075417_10387515	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006194\|Ga0075427_10006369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1708	Open in IMG/M
3300006800\|Ga0066660_10053157	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2658	Open in IMG/M
3300006844\|Ga0075428_100201804	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300006844\|Ga0075428_100407653	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006844\|Ga0075428_102667458	Not Available	510	Open in IMG/M
3300006845\|Ga0075421_100297893	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300006845\|Ga0075421_101483726	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300006846\|Ga0075430_100190414	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300006846\|Ga0075430_100518422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	983	Open in IMG/M
3300006847\|Ga0075431_100653376	Not Available	1032	Open in IMG/M
3300006852\|Ga0075433_10236857	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300006853\|Ga0075420_100076804	All Organisms → cellular organisms → Bacteria	2958	Open in IMG/M
3300006854\|Ga0075425_101239035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	847	Open in IMG/M
3300006880\|Ga0075429_100635634	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006969\|Ga0075419_10329118	Not Available	1035	Open in IMG/M
3300009094\|Ga0111539_12416760	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009100\|Ga0075418_10115018	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300009100\|Ga0075418_12682727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	544	Open in IMG/M
3300009147\|Ga0114129_10828103	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300009147\|Ga0114129_12918445	Not Available	565	Open in IMG/M
3300009156\|Ga0111538_10810942	Not Available	1185	Open in IMG/M
3300009156\|Ga0111538_12167549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	698	Open in IMG/M
3300009553\|Ga0105249_12211317	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009840\|Ga0126313_10050355	All Organisms → cellular organisms → Bacteria	2935	Open in IMG/M
3300009840\|Ga0126313_10611379	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300009840\|Ga0126313_11486051	Not Available	563	Open in IMG/M
3300010036\|Ga0126305_10382135	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	926	Open in IMG/M
3300010037\|Ga0126304_10661525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	705	Open in IMG/M
3300010038\|Ga0126315_10044119	Not Available	2392	Open in IMG/M
3300010038\|Ga0126315_10422340	Not Available	841	Open in IMG/M
3300010038\|Ga0126315_10689899	Not Available	666	Open in IMG/M
3300010038\|Ga0126315_11058203	Not Available	546	Open in IMG/M
3300010040\|Ga0126308_10501418	Not Available	820	Open in IMG/M
3300010041\|Ga0126312_10036401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3286	Open in IMG/M
3300010041\|Ga0126312_10060426	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300010041\|Ga0126312_10136458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	1697	Open in IMG/M
3300010041\|Ga0126312_10231814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1295	Open in IMG/M
3300010041\|Ga0126312_11206323	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010042\|Ga0126314_11321738	Not Available	541	Open in IMG/M
3300010044\|Ga0126310_10404814	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300010047\|Ga0126382_10958499	Not Available	746	Open in IMG/M
3300010047\|Ga0126382_11425583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	633	Open in IMG/M
3300010301\|Ga0134070_10438420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	521	Open in IMG/M
3300010362\|Ga0126377_12887019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	554	Open in IMG/M
3300010398\|Ga0126383_10602361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1170	Open in IMG/M
3300010398\|Ga0126383_12996683	Not Available	551	Open in IMG/M
3300010398\|Ga0126383_13400683	Not Available	520	Open in IMG/M
3300012198\|Ga0137364_10107800	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300012200\|Ga0137382_11098165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	568	Open in IMG/M
3300012205\|Ga0137362_11764332	Not Available	506	Open in IMG/M
3300012206\|Ga0137380_10757935	Not Available	840	Open in IMG/M
3300012212\|Ga0150985_118910210	Not Available	507	Open in IMG/M
3300012212\|Ga0150985_119534497	Not Available	590	Open in IMG/M
3300012362\|Ga0137361_11092738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Amesbacteria → Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	718	Open in IMG/M
3300012469\|Ga0150984_114714438	Not Available	538	Open in IMG/M
3300012469\|Ga0150984_118314628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1424	Open in IMG/M
3300012469\|Ga0150984_118380314	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012922\|Ga0137394_10513432	Not Available	1017	Open in IMG/M
3300012948\|Ga0126375_10784085	Not Available	753	Open in IMG/M
3300012948\|Ga0126375_11901527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	523	Open in IMG/M
3300012971\|Ga0126369_10221953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1840	Open in IMG/M
3300012971\|Ga0126369_10716015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1079	Open in IMG/M
3300012971\|Ga0126369_11365240	Not Available	799	Open in IMG/M
3300012971\|Ga0126369_12460455	Not Available	606	Open in IMG/M
3300012971\|Ga0126369_13203325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	536	Open in IMG/M
3300013306\|Ga0163162_11305128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	825	Open in IMG/M
3300014488\|Ga0182001_10524816	Not Available	551	Open in IMG/M
3300015356\|Ga0134073_10171161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	702	Open in IMG/M
3300015357\|Ga0134072_10058257	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300015357\|Ga0134072_10393341	Not Available	544	Open in IMG/M
3300015371\|Ga0132258_12538213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1281	Open in IMG/M
3300015373\|Ga0132257_100675375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1282	Open in IMG/M
3300016270\|Ga0182036_10638488	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	857	Open in IMG/M
3300016294\|Ga0182041_10566431	Not Available	994	Open in IMG/M
3300016357\|Ga0182032_12043836	Not Available	503	Open in IMG/M
3300016371\|Ga0182034_11936358	Not Available	520	Open in IMG/M
3300016422\|Ga0182039_12063383	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300016445\|Ga0182038_10245009	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300017792\|Ga0163161_11791836	Not Available	546	Open in IMG/M
3300018074\|Ga0184640_10090391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1321	Open in IMG/M
3300018468\|Ga0066662_11997927	Not Available	607	Open in IMG/M
3300026310\|Ga0209239_1053849	Not Available	1805	Open in IMG/M
3300026550\|Ga0209474_10312965	Not Available	913	Open in IMG/M
3300027873\|Ga0209814_10169818	Not Available	938	Open in IMG/M
3300027880\|Ga0209481_10093843	Not Available	1443	Open in IMG/M
3300027880\|Ga0209481_10707947	Not Available	523	Open in IMG/M
3300027909\|Ga0209382_10588242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1213	Open in IMG/M
3300027909\|Ga0209382_10651017	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300027909\|Ga0209382_11202058	Not Available	775	Open in IMG/M
3300030902\|Ga0308202_1049793	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. Atlit-28R	766	Open in IMG/M
3300030989\|Ga0308196_1066798	Not Available	525	Open in IMG/M
3300031093\|Ga0308197_10004747	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300031731\|Ga0307405_10397602	Not Available	1078	Open in IMG/M
3300031852\|Ga0307410_11276074	Not Available	642	Open in IMG/M
3300031879\|Ga0306919_10264849	Not Available	1296	Open in IMG/M
3300031908\|Ga0310900_10748889	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031941\|Ga0310912_11112351	Not Available	603	Open in IMG/M
3300031946\|Ga0310910_10106285	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300031947\|Ga0310909_11557219	Not Available	525	Open in IMG/M
3300031954\|Ga0306926_12587246	Not Available	554	Open in IMG/M
3300031995\|Ga0307409_102797560	Not Available	516	Open in IMG/M
3300032159\|Ga0268251_10096423	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Daviesbacteria → Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1048	Open in IMG/M
3300032159\|Ga0268251_10565495	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300032261\|Ga0306920_103443509	Not Available	586	Open in IMG/M
3300034644\|Ga0370548_119132	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.04%
Host-Associated	Host-Associated	36.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.32%
Plants	Host-Associated → Plants	36.96%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.80%
Phylloplane	Host-Associated → Plants → Phylloplane	3.62%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.35%
Loam	Environmental → Terrestrial → Soil → Loam	3.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	5.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.17%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0523.00000620	2162886007	Switchgrass Rhizosphere	NGFNIAIVPASMLPLTKTLKEKVNTLPKGGVFLCYAQENNRQRKILERVEKTFREHGHVVRSLSMSEVYKTIPNF
ARSoilOldRDRAFT_0200261	3300000044	Arabidopsis Rhizosphere	LPLTQTLKEEVNTLPKGGVFLCYAKENSRQRKILERVGETFRDHGHAVKSMSVGEVYKTTPNV*
JGI10213J12805_102080741	3300000858	Soil	DNIAIVPASMLPLIQTLKGKANTLPKGGVFLCYAKENSRQRKILERVEETFREHGHAVKSMSVREVLN*
JGI1027J12803_1012334001	3300000955	Soil	MLPLTKTLKEKVNTLPKGGVLLCYAQENSRQRKILERVEETFREQGHVVRRLTMGEVYKNSPNF*
JGI1027J12803_1014401431	3300000955	Soil	PLTQTLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHVVRSLSMREFYKTTPNF*
JGI1027J12803_1042537522	3300000955	Soil	MLPLPQTLKEKVNTLPKGGVFLCYAQENSRQRKILERVGETFREQGHTVKSMSVGEVYKTNPNF*
JGI1027J12803_1049360892	3300000955	Soil	MDNIAIVPASMLPLTQTLKEQVNTLPQGAVFLCYAEENTRQRKILERVEETFREQGHTVKSMAVGEVYKPTPHL*
Ga0066395_102621663	3300004633	Tropical Forest Soil	MLPLTQTLKEKVNTLPKGAVVLCYAAENTRQRKLLERVGETFRQQGHAVRSLSMEEVFSLA*
Ga0066684_105353812	3300005179	Soil	MLPLTQTLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHAVKSMSVGEVYKTAPNV*
Ga0065704_106739442	3300005289	Switchgrass Rhizosphere	AIVPASMLPLTQTLKEKVNTLPKGGVFLCYAQENTRQRKILERVGETFREQGHVVRSLSMREIYKTTPNF*
Ga0065705_100286011	3300005294	Switchgrass Rhizosphere	ASMLPLTKTLKEKVNTLPKGGVFLCYAQENNRQRKILERVEKTFREHGHVVRSLSMSEVYKTIPNF*
Ga0065705_101379683	3300005294	Switchgrass Rhizosphere	MLPLTETLKEKVNTLPQGAVFLCYAEENSRQRMILERVEETFREHGHVVRSLSMREVYKTTPNF*
Ga0065705_102982592	3300005294	Switchgrass Rhizosphere	MLPLTKIVKEKVNTLPKGGVFLCYAKENTRQRKILERVEVTFREQGHAVTSMSVGEVYKSTPSF*
Ga0065705_103932271	3300005294	Switchgrass Rhizosphere	MLPLTKTLKEKVNTLPKGGVFLYYAQENTGQRKILERGEETFKQQGHLVRSLSMEEVYTHASKSGY*
Ga0065705_110019111	3300005294	Switchgrass Rhizosphere	LDNIAIVPASMLPLTQTLKEKVNTLPQGGVFLCYAQENSRQRKILERVEETFREHGHVVRSLSTREVYKTTPNL*
Ga0065707_101318674	3300005295	Switchgrass Rhizosphere	TDALKEKVNTLPKGGVFLCYANENSRQKKILERVEETFREQGHAVKSMSVGEVYKTIPNA
Ga0065707_102329113	3300005295	Switchgrass Rhizosphere	AIVPASMLPLMETLKETVNALPQGGVILCYTAENTRQRKLLEQVGETFRQHGHAVMQLPIEQGGTS*
Ga0065707_111318722	3300005295	Switchgrass Rhizosphere	IAIVPASMLLLPQMLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFRGQGHAVKSMSVGEVFS*
Ga0066388_1059116771	3300005332	Tropical Forest Soil	NIAIVPASMLPLTQTLKEKVNTLPKGAVVLCYAAENTRQRKLLERVGETFRQQGHAVRSLSMEEVFSLA*
Ga0066698_104311673	3300005558	Soil	PLTETIKEKVNMLPKGGVFLCYAKENSRQRKTLERVGETFREHGHTVRSMSMGEVYKSIPNF*
Ga0066670_103055451	3300005560	Soil	NIAIVPASMLPLTQTLKEKVNALPKGGVFLCYAQENSRQKKILKRVEETFREHGHVVKSISMGEVYKTPPHF*
Ga0066670_106089122	3300005560	Soil	SMLPLTQTLKEKVNTLPKGGVFLCYAQENTRQKKILERVEETFREHGHAVKSMSIGEVYKNTPNL*
Ga0058697_100656912	3300005562	Agave	VPASMLPLPQTLKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFREQGHAVKSMSVGEVYKTIPNF*
Ga0058697_101189381	3300005562	Agave	NIAIVPASMLPLPQTLKEKVNTLPQGGVVLCYAAENTRQKKILERVGETFREQGHVVRSLSVSEVYKTTPRF*
Ga0058697_101404321	3300005562	Agave	TLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREQGHAVRSMSIGEVNALAWKPN*
Ga0066708_108024761	3300005576	Soil	MLPLTQTLKEKVNTLPKGGVFLCYAKENSRQKKILERVEEAFREHGHAVRSMSVGEVY
Ga0066706_101445203	3300005598	Soil	PLTDTLKKKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHAVRSMSIGEVYKAAPNF*
Ga0066903_1015860321	3300005764	Tropical Forest Soil	MLPLTEALKENLNTLPKGGVFLCYAKENSRQRKILERVEETFREQGHIVRGLSVREVYKTTGALGDSYASIFWC*
Ga0066903_1026195502	3300005764	Tropical Forest Soil	MDNIAIVPASILPLTPLLKEKVNMLPKGGVFLCYAKENTRQRKILELVEETFRKHGHQVKSMSVLEVYNTTPKFLAPA*
Ga0066903_1075498961	3300005764	Tropical Forest Soil	TLKEKVNTLPKGGVFLCYAKENSRQKKILERVEETFREQGHAVKSMSIGEVYKTNPNF*
Ga0075417_102307311	3300006049	Populus Rhizosphere	IVPASMLPLIPLLKEKVNTLPKGGVFLCYAQENTRQKKILEQVGETFRQHGHAVMNLSMEQVAYP*
Ga0075417_102387572	3300006049	Populus Rhizosphere	MDTIAIVPASMLPLPHTFKEQVNTLPKGGVLLCYAQENSRQRKILERVGETFREHGHVVKSLSLREV*
Ga0075417_103875152	3300006049	Populus Rhizosphere	MLPLPQTLKEKVNTLPKGGVFLCYAKENRRQRKIIERVGETFKEHGHAVKSISVGELLS*
Ga0075427_100063692	3300006194	Populus Rhizosphere	MLPLTQTLKEKVNTLPKGGVFLCYAQENNRQRKILERVKETFREHGHVVKSMSVGEVYKTTPHL*
Ga0066660_100531572	3300006800	Soil	MDNIAIVPASMLPLTETLKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFREHGHAVKSMSVGEVYKTIPNF*
Ga0075428_1002018043	3300006844	Populus Rhizosphere	SMLPLPQTLKEKVNTLPKGGVFLCYAQENSKQRKILERVEETFREHGHAVSSMSIGEVAQFITICSA*
Ga0075428_1004076532	3300006844	Populus Rhizosphere	MDNIAIVPASMLPLTQTLKGEVNMLPKGGVFLCYAKENSRQRRILERVGETFREHGHEVKSMSTGEVYKTAPKF*
Ga0075428_1026674581	3300006844	Populus Rhizosphere	LKARLDNIAIVPASMLPLTETLKEKVNTLPKGGVFLCYAKENSRQRKILERVGEAFRQQGYAVRSMSMGEVYTKSLRI*
Ga0075421_1002978933	3300006845	Populus Rhizosphere	ASMLPLTQTLKERVNTLPKGGVFLCYAKENSRQRKILERVEETFREHGHAVKSMSVGEVYGRVPEACG*
Ga0075421_1014837263	3300006845	Populus Rhizosphere	VNTLPKGGVFLCYAKENSKQKKILERVEETFRGHGHVVRRLSLREVYKTTPNL*
Ga0075430_1001904141	3300006846	Populus Rhizosphere	MLPLTQTLKEKVNTLPKGSVFLCYAKENSRQRKILERVGETFREHGHEVRSMSVGDVHKTTANF*
Ga0075430_1005184222	3300006846	Populus Rhizosphere	MLPLPHTFKEQVNTLPKGGVLLCYAQENSRQRKILERVGETFREHGHVVKSLSLREV*
Ga0075431_1006533762	3300006847	Populus Rhizosphere	SMLPLTQTLKEKVNTLPKGSVFLCYAKENSRQRKILERVGETFREHGHEVRSMSVGDVHKTTANF*
Ga0075433_102368572	3300006852	Populus Rhizosphere	MDNIAIVPASMLPLTEIVKEKVNTLPKGGVFLCYAKENSRQRKLLERVEETFREQGHAVKSMSVGEVYKTTSNF*
Ga0075420_1000768045	3300006853	Populus Rhizosphere	KEKVNTLPKGGVFLCYAKENTRQRKILERVEETFREHGHAVKSMSVGEVYKTTPNF*
Ga0075425_1012390352	3300006854	Populus Rhizosphere	MDNIAIVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENSRQRKILERIGETFREQGLAVRSMSMGEVYKPTRNF*
Ga0075429_1006356343	3300006880	Populus Rhizosphere	NIAIVPASMLPLTKTLKEKVNTLPKGGVFLCYAQENNRQRKILARVEKTFREHGHVVRSLSMSEVYKTISNF*
Ga0075419_103291181	3300006969	Populus Rhizosphere	MLPLPHTFKEQVNTLPKGEVLLCYAQENSRQRKILERVGETFREHGHVVKSLSLREV*
Ga0111539_124167601	3300009094	Populus Rhizosphere	ARMDNIAIVPASMLPLPEILKGKVNTLPKGGVFLCYAKENSRQKKILERVEETFREHGHVVRSLSMREVYKL*
Ga0075418_101150181	3300009100	Populus Rhizosphere	IVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENSRQRKILERIGETFREQGHAVRSMSMGEVYKPTRNF*
Ga0075418_126827271	3300009100	Populus Rhizosphere	MLPLTQTLKEKVNTLPKGGVFLCYAQENTRQRKILERVEETFREHGHAVKSMSVGEVYKTTPNF*
Ga0114129_108281032	3300009147	Populus Rhizosphere	MDNIAIVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENSRQRKILERIGETFREQGHAVRSMSMGEVYKPTRNF*
Ga0114129_129184451	3300009147	Populus Rhizosphere	KALLKARLDNIAIVPASMLPLTETLKEKVNTLPKGGVFLCYAKENSRQRKILERVGEAFRQQGYAVRSMSMGEVYTKSLRI*
Ga0111538_108109422	3300009156	Populus Rhizosphere	MDNIAIVPASMLPLTQTLKEKVNTLPKGGVFLCYAKENNRQRKLLERVGETFWEQGHVVSSLSVEEVYK
Ga0111538_121675492	3300009156	Populus Rhizosphere	MDTIAIVPASMLPLTNILKETVNTLPQGAVFLCYVEENTRQRQLLKRVEETFREHGHEVRSLSMREVYKTTPHL*
Ga0105249_122113171	3300009553	Switchgrass Rhizosphere	PLLKEKVNTLPKGGVFLCYAQENSRQRKILERIGETFREQGHAVRSMSMGEVYKPTRNF*
Ga0126313_100503552	3300009840	Serpentine Soil	MDNIAIVPASMLPLTPLLKEKANTLPKGGVFLCYAQENSRQRRILERVEETFREQGHAVKSMSMGEVYKNTPHF*
Ga0126313_106113792	3300009840	Serpentine Soil	LTQTLKEKVNTLPKGGVFLCYAKENSRQKKILERVEEAFREHGHAVRSMSVGEVYKTTPNF*
Ga0126313_114860511	3300009840	Serpentine Soil	QTLKEKVNTLPQGAVFLCYAEENTRQRKILERVEETFREHGHVVRSLSMREVYKTTPNF*
Ga0126305_103821351	3300010036	Serpentine Soil	KEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHVVRRLSLREVYNPIPNF*
Ga0126304_106615252	3300010037	Serpentine Soil	LNASLDNIAIVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENSRQRKILERVGETFRDHGHTVRSMSVGEVYKNSPNF*
Ga0126315_100441193	3300010038	Serpentine Soil	MDNIAIVPASMLPLTATLKEKVNTLPKGGVVLCYAAENSRQKKLLERVGETFKQHGHAVLHLPVEQGA*
Ga0126315_104223402	3300010038	Serpentine Soil	MLPLTQTLKKKVNMLPKGGVFLCYAQENSRQRKILERVEETFRQQGHAVRSMPMEQVYKTTPIF*
Ga0126315_106898991	3300010038	Serpentine Soil	IVKEKVNTLPKGGVLLCYAQENSRQRKILERVEETFREHGHAVKSMSVGEV*
Ga0126315_110582032	3300010038	Serpentine Soil	MLPLTQTLKGKVNTLPKGGVFLCYARENSRQRKILERVEETFREQGHAVKSMSVGEVYKTTPRY*
Ga0126308_105014181	3300010040	Serpentine Soil	IVPASMLPLTKILKEKVNRLPKGGVFLCYAKENSRQRMILERVEETFREQGHVVRSLSMREVYTNTPHS*
Ga0126312_100364013	3300010041	Serpentine Soil	MDNIAIVPASMLPLTQTLKEKVNTLPKGGVFLCYAKENSRQRKIIERVGETFREHGHAVKSMSMGEVNKN*
Ga0126312_100604262	3300010041	Serpentine Soil	MDNIAIVPASMLPLTPLLKEKANTLPKGGVFLCYVQENSRQRRILERVEETFREQGHAVKSMSMGEVYKNTPHF*
Ga0126312_101364581	3300010041	Serpentine Soil	TLKEKVNTLPKGGVFLCYAEENSRLRKILERVGETFREHGHTVKSMAVGEVHKTSPHF*
Ga0126312_102318142	3300010041	Serpentine Soil	MDNIAIIPASMLPLTKIVKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFRQQGHAVRSMPMEQVYKTTPIF*
Ga0126312_112063231	3300010041	Serpentine Soil	MLPLTQTLKEKVNTLPKGGVFLCYAKENSRQKKILERVEEAFREHGHAVRSMSVGEVYKTTPNF*
Ga0126314_113217381	3300010042	Serpentine Soil	NIAIVPASMLPLTQIVKEKVNKLPKGGVFLCYAKENTRQRKILERVEETFREQGHAVKRMSVGDVYKATPKF*
Ga0126310_104048141	3300010044	Serpentine Soil	NLLTERVNRLPKGGVFLCYAEENSRQQKILERVGEAFREQGHTVMNLSMGEAYTTSRNF*
Ga0126382_109584991	3300010047	Tropical Forest Soil	MLPLTQTLKEKVNTLPKGAVVLCYAAENTRQRKLLERVGETFRQQGHAVRNLSMEEVFSLA*
Ga0126382_114255832	3300010047	Tropical Forest Soil	MDNIAIVPASMLPLPQTLKEKVNSLPKGGVFLCYAKENSRQRKILERVEETFREQGHMVKSMSVGEVDKTNPNF*
Ga0134070_104384202	3300010301	Grasslands Soil	LKARLDNIAIVPASMLPLTKILKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFREHGHVVRSMAVGEVYKTAPNV*
Ga0126377_128870192	3300010362	Tropical Forest Soil	MDNIAIVPASMLPMMEALKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFREQGHAVRSMSMGEVYRTTPNL*
Ga0126383_106023611	3300010398	Tropical Forest Soil	KARLDNIAIVPASMLPLTQTIKEKVNMLPKGGVFLCYAQKNSRQRKILERVEETFREQGHVVRSLSMQEVYTTTPNL*
Ga0126383_129966832	3300010398	Tropical Forest Soil	RLDNIAIVPANMLPLTQTLKEKVNTLPKGAVVLCYAAENTRQRKLLERVGETFRQQGHAVRSLSMEEVFSLA*
Ga0126383_134006832	3300010398	Tropical Forest Soil	VDNIAIVPASMLPLPQTLKEKVNTLPKGGVFLCYAKEHSRQRKILERVEETFREQGHMVKSMSVGEVYKTTPNF*
Ga0137364_101078002	3300012198	Vadose Zone Soil	MLPLTPLLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHAVRSMSIGEVYKAAPNF*
Ga0137382_110981652	3300012200	Vadose Zone Soil	MDNIAIVPASMLPLTDSLKEKVNTLPKGGVLLCYSQENTRQRKILERVEETFREHGHAVRSMSMREVYKTAPNF*
Ga0137362_117643322	3300012205	Vadose Zone Soil	LKEKVNTLPRGGVFLCYAKENSRQKKILERVEETFREHGHAVKSMSVGEVYKTTPNF*
Ga0137380_107579352	3300012206	Vadose Zone Soil	LKARLDNIAIVPASMLPLTKILKEKVNTLPKGAVFLCYAEENTRQRKLLKRVGEIFREQGHEVRSLSMREVYKTTPNF*
Ga0150985_1189102101	3300012212	Avena Fatua Rhizosphere	QTLKEKVNTLPKGGVFLCYARENSRQRNILERVEETFREHGHAVRSMSMGEVYKTPPNF*
Ga0150985_1195344971	3300012212	Avena Fatua Rhizosphere	TLKEKVNTLPKGGVFLCYAQENSRQRKILEWVGETFREHGYAVRSMSVGEVYKTTPNF*
Ga0137361_110927381	3300012362	Vadose Zone Soil	IAVVPARMLPLTKTLQEVLSHLPEGTVFLCHTEENTRQTTLLERVEETFREHGHAVKSMSVGEVYKTTPSL*
Ga0150984_1147144381	3300012469	Avena Fatua Rhizosphere	PASMLPLTKTLQEKVNTLPKGGVFLCYAKENSRQRKILERVEETFREQGHTVRSMSVGEVHKTSPNL*
Ga0150984_1183146281	3300012469	Avena Fatua Rhizosphere	MSLLPLTQTLKEKVNTLPKGGVVLCYTAKNSRQKKLLERVGETFRQHGHAVMNLSMEQVAYR*
Ga0150984_1183803142	3300012469	Avena Fatua Rhizosphere	SASMLPLTKMVKDKVNTLPQGAVFLCYAAENPRQRKLLERVGETFREHGHVVRTLSMREV
Ga0137394_105134321	3300012922	Vadose Zone Soil	TLKEKVNTLPKGGVFLCYAKENSRQRKILKLVEETFREHGHAVRSMSMREAYKTAPNF*
Ga0126375_107840853	3300012948	Tropical Forest Soil	LKARLDNIAIVPASMLPLTDTLKEKVSTLPKGAVVLYYIAENTRQQKILERLGETFRQHGHTVIHIPMELGAL*
Ga0126375_119015271	3300012948	Tropical Forest Soil	MDNIAIVPASMLPLPQTLKEEVNTLPKGGVFLCYAKENSRQKKILERVEETFREQGHAVKSMSVREVYQTTPNF*
Ga0126369_102219532	3300012971	Tropical Forest Soil	MDNIAIVPASMLPLTDTLKKKVNALPKGGVFLCYAKENTRQRKILEQVGETFRQQGHSVMNLPIEQEAY*
Ga0126369_107160153	3300012971	Tropical Forest Soil	HFGPNPTLSLLPLTQTLKEKVSSLPKGEVFLCYAKENTRQKKILERVEETFREHGHAARSMSVGEVYKTTPNF*
Ga0126369_113652401	3300012971	Tropical Forest Soil	KARMDNIAIVPASMLPLTDTLKEKVNTLPNGGVFLCYAKENTRQRKILKRVEETFREQGHVVRSMAVGEVYKTAPNF*
Ga0126369_124604551	3300012971	Tropical Forest Soil	NIAIVPASLLPLTQTLKEKVSMLPKGGVFLCYAKKNSRQKKILERVGETFREHGHAVINFPVEQEALYASPNQ*
Ga0126369_132033251	3300012971	Tropical Forest Soil	MDNIAIVPASMLPLPQTLKEKVNTLPKGGVFLCFAKENSRQRKILEQVEETFREQGHMVKSMSVGEVYKTNPNF*
Ga0163162_113051281	3300013306	Switchgrass Rhizosphere	MDNITIVPASMLPLAQTLKEKVNTLPKGGVFLCYAQENTRQRKIIERVEQTFREHGHVVRSMSVGEVFS*
Ga0182001_105248161	3300014488	Soil	MDNIAIVPASMLPLTQTLKEKVNTLPKGGVFLCYAQENTRQRKILERVEETFREHGHTVMNLSMGEAYTTSRNF*
Ga0134073_101711611	3300015356	Grasslands Soil	MDNIAIVPASMLPLTETLKEKVNTLPKGGVFLCYAQENSRQRKILERVEETFREHGHVVKSISMGEVY
Ga0134072_100582572	3300015357	Grasslands Soil	MLPLTQALKEKVNTLPQGGVFLCYAKENSRQRKILARVEEAFREHGHAVRSMSVGEVYTHTAKSGY*
Ga0134072_103933411	3300015357	Grasslands Soil	MDNIAIVPASMLPLTQTLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHTVRSMSIGEVYKTSPNF*
Ga0132258_125382132	3300015371	Arabidopsis Rhizosphere	MLPLTQTLKEEVNTLPKGGGFLCYAKENSRQRKILERVGETFRDHGHAVKSMSVGEVYKTTPNV*
Ga0132257_1006753752	3300015373	Arabidopsis Rhizosphere	MLPLTQTLKEEVNTLPKGGVFLCYAKENSRQRKILERVGETFRDHGHAVKSMSVGEVYKTTPNV*
Ga0182036_106384882	3300016270	Soil	ARLDNIAIVPASMLPLTETVKEKVNTLPKGGVFLCYAKENSRQRRILERVEETFREHGHAVKCISVGEVHKTIPHV
Ga0182041_105664312	3300016294	Soil	MLPLPQTLKEKVNTLPKGGVFLCYAKEHSRQRKILERVEETFREQGHMVKSMSVGEVYKTNSNF
Ga0182032_120438361	3300016357	Soil	LLKARLDNIAIVPASMLPLTDILKEKVNTLPKGAVVLCYAAENTRQRKLLERVGETFRQHGHAVMNLSMEQVAYR
Ga0182034_119363581	3300016371	Soil	LLKARMDNIAIVPASMLPLTQTLREKANTLPKGGVFLCYAQENTRQRKILDRVGETFREHGHVVRSLSVKEVYKNAPSF
Ga0182039_120633831	3300016422	Soil	AIVPASMLPLTQTLREKANTLPKGGVFLCYAQENTRQRKILDRVGETFREHGHVVRSLSVKEVYKNAPSF
Ga0182038_102450091	3300016445	Soil	NIAIVPASMLPLTETVKEKVNTLPKGGVFLCYAKENSRQRRILERVEETFREHGHAVKCMSVGEVHKTIPHV
Ga0163161_117918361	3300017792	Switchgrass Rhizosphere	KILKEKVNTLPHGAVFLCYSEENPRQRKLLEQVGETFREQGHVVRSMSMGEVYKTTPKF
Ga0184640_100903912	3300018074	Groundwater Sediment	LKARLDNIAIVPASMLPFTQTLQEKVNTLPKGAVFLCYAQENIRQRKLLERVGATFRQQGHAVMNLSMSEVYKNT
Ga0066662_119979271	3300018468	Grasslands Soil	MDNIAIVPASMLPLTETLKEKVNTLPKGGVFLCYAQENSRQKKILERVGETFREQGHAVRSMSMGEVYNNTPRF
Ga0209239_10538491	3300026310	Grasslands Soil	MLPLTDTLKKKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHAVRSMS
Ga0209474_103129652	3300026550	Soil	MDNIAIVPASMLPLTQTLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREHGHTVRSMSIGEVYKTSPNF
Ga0209814_101698181	3300027873	Populus Rhizosphere	DNIAIVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENTRQKKILEQVGETFRQHGHAVMNLSMEQVAYP
Ga0209481_100938434	3300027880	Populus Rhizosphere	KARLDNIAIVPASMLPLPQTLKEKVNTLPKGGVFLCYAKENTRQRKILERVEETFREHGHAVKSMSVGEVYKTTPNF
Ga0209481_107079472	3300027880	Populus Rhizosphere	ARMDSIAIVPASMLPLTKIVKEKVNTLPKGGVFLCYAKENSRQRKILERVGETFKQQGHAVRSMSVGEVYNNTQNF
Ga0209382_105882421	3300027909	Populus Rhizosphere	MLPLTQTLKEKVNTLPKGGVFLCYAQENNRQRKILERVKETFREHGHVVKSMSVGEVYKTTPHL
Ga0209382_106510172	3300027909	Populus Rhizosphere	MDNIAIVPASMLPLTPLLKEKVNTLPKGGVFLCYAQENSRQRKILERIGETFREQGHAVRSMSMGEVYKPTRNF
Ga0209382_112020581	3300027909	Populus Rhizosphere	LKARLDNIAIVPASMLPLTQTLKDKVNTLPKGGVFLCYAKENSKQKKILERVEETFRGHGHVVRRLSLREVYKTTPNL
Ga0308202_10497931	3300030902	Soil	IAIVPASMLPLTETLKERINTLPSGAVLLCYAEENTRQRKILARVEETFREHGHTVMHLSMGEVYTKS
Ga0308196_10667981	3300030989	Soil	ALLKARMDNIAIVPASTLPLTETLKERINTLPSGAVLLCYAEENTRQRKILARVEETLREHGHTVMHLSMGEVYTKS
Ga0308197_100047474	3300031093	Soil	LLKARMDNIAIVPASMLPLTETLKERINTLPSGAVFLCYAEENTRQRKILARVEETLREHGHTVMHLSMGEVYTKS
Ga0307405_103976022	3300031731	Rhizosphere	LLKARFDNIAIVPASMLPLTQTLKEKVNTLPQGAVFLCYAEENTRQRKILERVEETFREHGHVVRSLSMREVYKTTPNF
Ga0307410_112760742	3300031852	Rhizosphere	PLTPLLKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREQGHAVKSMSVREVYKAAPNF
Ga0306919_102648491	3300031879	Soil	SMLPLPQTLKEKVNTLPKGGVFLCYAKEHSRQRKILERVEETFREQGHMVKSMSVGDVYKTTPNFSTSR
Ga0310900_107488891	3300031908	Soil	QPPKALLKARLENIAIVPASMLPLTDILKQKVNTLPKGAVVLCYAAENPRQRKLLERVGETFQQHGHAVMHLPADEAGYQ
Ga0310912_111123512	3300031941	Soil	MLPLPQTLKEKVNTLPKGGVFLCYAKEHSRQRKILERVEETFREQGHMVKSMSVGDVYKTTPNF
Ga0310910_101062851	3300031946	Soil	IVPASMLPLPQTLKEKVNTLPKGGVFLCYAKENSKQRKILERVEETFREQGHMVKSMSVGEVYKTTSNF
Ga0310909_115572191	3300031947	Soil	RMDNIAIVPASMLPLTQTLREKANTLPKGGVFLCYAQENTRQRKILDRVGETFREHGHVVRSLSVKEVYKNAPSF
Ga0306926_125872461	3300031954	Soil	TQTLREKANTLPKGGVFLCYAQENTRQRKILDRVGETFREHGHVVRSLSVKEVYKNAPSF
Ga0307409_1027975601	3300031995	Rhizosphere	PASMLPLTQTLKEKVNTLPKGGVFLCYARENSRQRKIIERVGETFREHGHAVKSMSMGEAYKTTPNY
Ga0268251_100964231	3300032159	Agave	LKEKVNTLPKGGVFLCYAQENSRQKKILERVEETFREQGHAVRSMSIGEVNALAWKPN
Ga0268251_105654952	3300032159	Agave	MLPLPQTLKEKVNLLPKGGVFLCYAKENSRQRRILERIGETFREQGHAVKSMSVGEAYTTSRTF
Ga0306920_1034435091	3300032261	Soil	NARLDNIAIVPASLLPLTQTIKEKVNTLPKGGVFLCYAKENSRQKKILERVGETFREQGHAVMNLPMETGAL
Ga0370548_119132_344_538	3300034644	Soil	MLPLTETLKEKVNTLPQGAVFLCYAEENTRQRKILERVEETFRQHGHAVRSMSMEQVYKTTPHV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences