NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055849

Metagenome / Metatranscriptome Family F055849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055849
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 68 residues
Representative Sequence VSYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Number of Associated Samples 126
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.45 %
% of genes near scaffold ends (potentially truncated) 96.38 %
% of genes from short scaffolds (< 2000 bps) 91.30 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.551 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(6.522 % of family members)
Environment Ontology (ENVO) Unclassified
(38.406 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.333 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.17%    β-sheet: 13.83%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF03401TctC 16.67
PF02518HATPase_c 2.90
PF00884Sulfatase 1.45
PF12770CHAT 1.45
PF01168Ala_racemase_N 1.45
PF12973Cupin_7 1.45
PF00218IGPS 0.72
PF01885PTS_2-RNA 0.72
PF14294DUF4372 0.72
PF08502LeuA_dimer 0.72
PF01663Phosphodiest 0.72
PF07642BBP2 0.72
PF03167UDG 0.72
PF00512HisKA 0.72
PF003936PGD 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 16.67
COG0119Isopropylmalate/homocitrate/citramalate synthasesAmino acid transport and metabolism [E] 0.72
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 0.72
COG03626-phosphogluconate dehydrogenaseCarbohydrate transport and metabolism [G] 0.72
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.72
COG10236-phosphogluconate dehydrogenase (decarboxylating)Carbohydrate transport and metabolism [G] 0.72
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.72
COG1859RNA:NAD 2'-phosphotransferase, TPT1/KptA familyTranslation, ribosomal structure and biogenesis [J] 0.72
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.55 %
UnclassifiedrootN/A1.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2209111006|2214771047All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium796Open in IMG/M
3300001431|F14TB_101517823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1042Open in IMG/M
3300002243|C687J29039_10322799All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii531Open in IMG/M
3300002907|JGI25613J43889_10222866All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium509Open in IMG/M
3300003991|Ga0055461_10016609All Organisms → cellular organisms → Bacteria1517Open in IMG/M
3300004281|Ga0066397_10103687All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300004463|Ga0063356_102296361All Organisms → cellular organisms → Bacteria → Proteobacteria823Open in IMG/M
3300004463|Ga0063356_103907134All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium642Open in IMG/M
3300005206|Ga0068995_10030045All Organisms → cellular organisms → Bacteria → Proteobacteria897Open in IMG/M
3300005289|Ga0065704_10132456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1612Open in IMG/M
3300005294|Ga0065705_10022614All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300005294|Ga0065705_10370180All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium925Open in IMG/M
3300005294|Ga0065705_11154328All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus watsonii511Open in IMG/M
3300005336|Ga0070680_100188416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1738Open in IMG/M
3300005343|Ga0070687_100838203All Organisms → cellular organisms → Bacteria → Proteobacteria654Open in IMG/M
3300005441|Ga0070700_100734226All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300005444|Ga0070694_101138137All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium652Open in IMG/M
3300005445|Ga0070708_100144340All Organisms → cellular organisms → Bacteria2210Open in IMG/M
3300005451|Ga0066681_10982274All Organisms → cellular organisms → Bacteria → Proteobacteria504Open in IMG/M
3300005457|Ga0070662_100143597All Organisms → cellular organisms → Bacteria → Proteobacteria1852Open in IMG/M
3300005471|Ga0070698_100871215All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium846Open in IMG/M
3300005487|Ga0074211_134976All Organisms → cellular organisms → Bacteria → Proteobacteria937Open in IMG/M
3300005535|Ga0070684_100444163All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1198Open in IMG/M
3300005555|Ga0066692_10468158All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300005764|Ga0066903_107605050All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria558Open in IMG/M
3300005840|Ga0068870_10655763All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300006194|Ga0075427_10077789All Organisms → cellular organisms → Bacteria → Proteobacteria597Open in IMG/M
3300006844|Ga0075428_100167527All Organisms → cellular organisms → Bacteria2383Open in IMG/M
3300006845|Ga0075421_100006089All Organisms → cellular organisms → Bacteria14665Open in IMG/M
3300006846|Ga0075430_100694212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria839Open in IMG/M
3300006847|Ga0075431_101779763All Organisms → cellular organisms → Bacteria → Proteobacteria572Open in IMG/M
3300006876|Ga0079217_11439352All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300006881|Ga0068865_100241033All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300006894|Ga0079215_10031908All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1892Open in IMG/M
3300007076|Ga0075435_100496406All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300009053|Ga0105095_10220318All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1040Open in IMG/M
3300009081|Ga0105098_10258907All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria823Open in IMG/M
3300009087|Ga0105107_10436716All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium912Open in IMG/M
3300009100|Ga0075418_11961170All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300009137|Ga0066709_104193584All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria525Open in IMG/M
3300009147|Ga0114129_12444747All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium625Open in IMG/M
3300009167|Ga0113563_12298705All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria648Open in IMG/M
3300009176|Ga0105242_11862983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria641Open in IMG/M
3300009609|Ga0105347_1212278All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300010043|Ga0126380_11265666All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria640Open in IMG/M
3300010043|Ga0126380_11715060All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria565Open in IMG/M
3300010361|Ga0126378_10447931All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1405Open in IMG/M
3300010362|Ga0126377_11758404All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria695Open in IMG/M
3300010391|Ga0136847_10102732All Organisms → cellular organisms → Bacteria12020Open in IMG/M
3300011333|Ga0127502_10681847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria565Open in IMG/M
3300011409|Ga0137323_1024447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1345Open in IMG/M
3300011437|Ga0137429_1011639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp.2508Open in IMG/M
3300011438|Ga0137451_1074847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1012Open in IMG/M
3300012133|Ga0137329_1043802All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012173|Ga0137327_1064805All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria807Open in IMG/M
3300012200|Ga0137382_10231174All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1277Open in IMG/M
3300012204|Ga0137374_10377390All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1135Open in IMG/M
3300012209|Ga0137379_11418459All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria597Open in IMG/M
3300012210|Ga0137378_10171189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2017Open in IMG/M
3300012232|Ga0137435_1064043All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1086Open in IMG/M
3300012353|Ga0137367_10623978All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium754Open in IMG/M
3300012355|Ga0137369_10508664All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium850Open in IMG/M
3300012359|Ga0137385_10769316All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria801Open in IMG/M
3300012483|Ga0157337_1004935All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium872Open in IMG/M
3300012503|Ga0157313_1068233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium501Open in IMG/M
3300012923|Ga0137359_10289968All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1458Open in IMG/M
3300012930|Ga0137407_11948886All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300013096|Ga0157307_1184142All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium508Open in IMG/M
3300014255|Ga0075320_1011749All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1342Open in IMG/M
3300014255|Ga0075320_1030842All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300014301|Ga0075323_1003744All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2272Open in IMG/M
3300014310|Ga0075331_1012392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1896Open in IMG/M
3300014314|Ga0075316_1106182All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium673Open in IMG/M
3300014879|Ga0180062_1070807All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria768Open in IMG/M
3300014880|Ga0180082_1085345All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria702Open in IMG/M
3300015357|Ga0134072_10231119All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300015371|Ga0132258_11685012Not Available1599Open in IMG/M
3300015371|Ga0132258_11879632All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1508Open in IMG/M
3300015373|Ga0132257_104197337All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300015374|Ga0132255_105993692All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300016371|Ga0182034_11165394All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium670Open in IMG/M
3300017654|Ga0134069_1114800All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria884Open in IMG/M
3300017966|Ga0187776_11497574All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium518Open in IMG/M
3300018053|Ga0184626_10155268All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300018074|Ga0184640_10054250All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300018469|Ga0190270_13239258All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300019885|Ga0193747_1108023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria669Open in IMG/M
3300020003|Ga0193739_1024516All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1572Open in IMG/M
3300020200|Ga0194121_10268132All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria883Open in IMG/M
3300021081|Ga0210379_10055950All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1581Open in IMG/M
3300021081|Ga0210379_10333472All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria666Open in IMG/M
3300021090|Ga0210377_10627483All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium602Open in IMG/M
3300022563|Ga0212128_10149139All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1505Open in IMG/M
(restricted) 3300024054|Ga0233425_10433251All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria538Open in IMG/M
3300025146|Ga0209322_10122641All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1175Open in IMG/M
3300025159|Ga0209619_10056644All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2440Open in IMG/M
3300025160|Ga0209109_10197371All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria994Open in IMG/M
3300025165|Ga0209108_10058225All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2131Open in IMG/M
3300025165|Ga0209108_10151076All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1224Open in IMG/M
3300025289|Ga0209002_10200776All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1231Open in IMG/M
3300025289|Ga0209002_10265064All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1027Open in IMG/M
3300025313|Ga0209431_10809136All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria681Open in IMG/M
3300025322|Ga0209641_10051479All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3179Open in IMG/M
3300025322|Ga0209641_10590358All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria775Open in IMG/M
3300025324|Ga0209640_10513805All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria975Open in IMG/M
3300025324|Ga0209640_11402694All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium510Open in IMG/M
3300025792|Ga0210143_1055888All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria703Open in IMG/M
3300025934|Ga0207686_10148689All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1628Open in IMG/M
3300025961|Ga0207712_12010365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria517Open in IMG/M
3300026004|Ga0208416_1001712All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1590Open in IMG/M
3300026062|Ga0208654_1008847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1275Open in IMG/M
3300027646|Ga0209466_1102927All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria579Open in IMG/M
3300027650|Ga0256866_1195158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300027682|Ga0209971_1141329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria593Open in IMG/M
3300027873|Ga0209814_10147111All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1010Open in IMG/M
(restricted) 3300031197|Ga0255310_10157225All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria626Open in IMG/M
3300031228|Ga0299914_10553197All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria988Open in IMG/M
3300031229|Ga0299913_10950291All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium828Open in IMG/M
3300031455|Ga0307505_10596183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria537Open in IMG/M
3300031720|Ga0307469_10045159All Organisms → cellular organisms → Bacteria2717Open in IMG/M
3300031820|Ga0307473_10847301All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300031824|Ga0307413_11761274All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium554Open in IMG/M
3300031847|Ga0310907_10494934All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria653Open in IMG/M
3300031847|Ga0310907_10633106All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria586Open in IMG/M
3300031852|Ga0307410_11494623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium595Open in IMG/M
3300031858|Ga0310892_10812752All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria649Open in IMG/M
3300031965|Ga0326597_10886415All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria914Open in IMG/M
3300032004|Ga0307414_11687201All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium591Open in IMG/M
3300032174|Ga0307470_11463930All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria566Open in IMG/M
3300032179|Ga0310889_10439306All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria653Open in IMG/M
3300033407|Ga0214472_10537714All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300033417|Ga0214471_10407911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1095Open in IMG/M
3300033433|Ga0326726_11411666All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300033485|Ga0316626_10158839Not Available1738Open in IMG/M
3300033486|Ga0316624_10188073All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1584Open in IMG/M
3300033551|Ga0247830_10005273All Organisms → cellular organisms → Bacteria → Proteobacteria6396Open in IMG/M
3300034165|Ga0364942_0224784All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria613Open in IMG/M
3300034664|Ga0314786_150095All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.35%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.35%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil4.35%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.17%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.17%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.17%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.17%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.17%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.45%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.45%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.45%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.45%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.72%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.72%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.72%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.72%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.72%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.72%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.72%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.72%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111006Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002243Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300003991Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005487Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichmentEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300012133Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014255Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014310Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1EnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014879Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10DEnvironmentalOpen in IMG/M
3300014880Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10DEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300024054 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MGEnvironmentalOpen in IMG/M
3300025146Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026004Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300026062Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
22137901732209111006Arabidopsis RhizosphereQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF
F14TB_10151782323300001431SoilIYNYRLVNVSAAQVDHNKFAAGAKERLKEGACNRPETRDNFLRKGVTLRYSYFDKDKQHIATVDVTPADCGF*
C687J29039_1032279913300002243SoilKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
JGI25613J43889_1022286623300002907Grasslands SoilFEVGKLDHAKFAAGAKQRVTERACNEPEMRDDYLKKGITLRYSYFDKNKQHIATVDVTPADCGF*
Ga0055461_1001660943300003991Natural And Restored WetlandsLDHERFAVGAKQRVTQGACNQPDLREDYLKKGVTLRYSYFDKDKQHIATIDVTPADCGF*
Ga0066397_1010368713300004281Tropical Forest SoilKFAAGAKQRVTQGACGTPETRDDFLKKGVTLRYSYYDKDKQHIATFDVTPADCGF*
Ga0063356_10229636133300004463Arabidopsis Thaliana RhizosphereSGHEGMLIYNYRLVSYSVKNLDYRRFADGAHDRLVQNACSRPETRDDFLKKGVTLRYSYFDKDKQHIATIDVTPKDCGF*
Ga0063356_10390713423300004463Arabidopsis Thaliana RhizosphereLDHRKFAEGAKQKVTQGACSRPETRDDFLKEGVTLRYAYFDKDKQHIATVDVTPADCGFAAP*
Ga0068995_1003004513300005206Natural And Restored WetlandsHQRFAAGAKQRVTQGACNEPVMREDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0065704_1013245633300005289Switchgrass RhizosphereLAAQVDHNKFAAGAKERLKEGACNRPETRDNFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0065705_1002261413300005294Switchgrass RhizosphereMPALAAPGTLIYNYRLVNVSTAQVDHNKFAAGAKERLKEGACNRPETRDNFLKKGVTLRYSXFDKDKQHIATVDVTPADCGF*
Ga0065705_1037018013300005294Switchgrass RhizosphereLRLPPVTFAKQKLTQTVCNEPVMRDDLVKKGVTLRYSYFDKDKQPIASVDVTPADGGF*
Ga0065705_1115432813300005294Switchgrass RhizosphereTQLDRQKFAAGAKQKVIQGACSRPETRDDFLKEGVTLRYTYFDKDKQHIATVDVTPADCGFGAH*
Ga0070680_10018841633300005336Corn RhizosphereIDPRKFAAGVKEKVTQGACSRPETRDDFLKNGVTLRYSYFDKDNQHIATVDVTPADCGF*
Ga0070687_10083820313300005343Switchgrass RhizosphereLVSYSASQIDPRKFAAGVKEKVTQGACSRPETRDDFLKNGVTLRYSYFDKENKHIATVDVTPADCGF*
Ga0070700_10073422623300005441Corn, Switchgrass And Miscanthus RhizosphereYSVNQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0070694_10113813713300005444Corn, Switchgrass And Miscanthus RhizosphereGYSVNQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0070708_10014434013300005445Corn, Switchgrass And Miscanthus RhizosphereMLIYNYRLVSYSAAQLDAKKFATGAQQRLKQNACTNAETRDDFLKKGVTLRYSYYDKDKQHIATVDVTPADCGF*
Ga0066681_1098227423300005451SoilDRAKFAAGVKRKVTQEACSRPETRDDFLKKGVTLRYSYFDKDKQPIAAVDVTPKDCGF*
Ga0070662_10014359713300005457Corn RhizosphereAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0070698_10087121513300005471Corn, Switchgrass And Miscanthus RhizosphereVKYSVSQLDHQKFAAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFDVTPADCGF*
Ga0074211_13497613300005487SedimentIIAQCGDDRQRDELTVVEGHEGMLIYKYRLVPYSVQQLDHAKFAARAKQKVAQGACNQPEMRDDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0070684_10044416313300005535Corn RhizosphereLIYNYRLVSYSASQIDPARIAAGAKQRVTQAACNQPETRDDFLKKGVTLRYAYYDKDKKPIATVDVTPADCGF*
Ga0066692_1046815813300005555SoilYRLVSYSAAQVDSQRFAANARARISQSVCIRPETRDDFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0066903_10760505013300005764Tropical Forest SoilELMPAVGAPGMLIYNYRLVNVSAAQVNHNRFAAGAKERLREGACNRLETRDNFLKKDVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0068870_1065576323300005840Miscanthus RhizosphereLVSYSASQIDPRKFAAGVKEKVTQGACSRPETRDDFLKNGVTLRYSYFDKDNQHIATVDVTPADCGF*
Ga0075427_1007778923300006194Populus RhizospherePQKFGAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRPIATIDVTPTDCGF*
Ga0075428_10016752723300006844Populus RhizosphereLRLPPVTFAKQKLTQTVCNEPVMRDDLVKKGVTLRYSYFDKDKQPIASVDVTPADWGF*
Ga0075421_10000608913300006845Populus RhizosphereNYRLVKHSVAQLDHQKFAAGAQQKVAQGACNRPETRDGFLKEGVTLRYSYFDKEKKHIATVDVTPADCGF*
Ga0075430_10069421223300006846Populus RhizosphereNYRLVSYSVSQLDAAKFATGAKERVTQGACNRPETREDLLKQGVTLRYTYFDKDKQHIATIDVLPADCDS*
Ga0075431_10177976323300006847Populus RhizosphereMLIYKYRLVPYSVSQLDHQKFAAGAKQKVAQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0079217_1143935213300006876Agricultural SoilERFSAAAKSQLVQTSCNRPETRNDFLTKGVTMRFSYFDKDKQHIATIDVTPADCGF*
Ga0068865_10024103313300006881Miscanthus RhizosphereIYNYRLVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0079215_1003190833300006894Agricultural SoilQKFAAGAKQKVTQGACNQPEMRDGFLKQGVTLRYSYFDKDKRHIATIDVTPADCGF*
Ga0075435_10049640623300007076Populus RhizosphereNANKFAIGAKQRVTQGACGTPETRDDFLKKGVTLRYSYYDKDKQHIATFDVTPADCGF*
Ga0105095_1022031823300009053Freshwater SedimentSVSQLDHEKFAAGAKQKVAQGACNRPETRDDFLKNGVTLRYSYFDKDKRHIATVDVTPADCGF*
Ga0105098_1025890723300009081Freshwater SedimentVAAPAMLIYNYRLVSYSVAQVDHDRFAAGAKEQIKQGACSRPETRDTLLKKGVTLRYSYFDRDKQHIATVDVTPADCGF*
Ga0105107_1043671613300009087Freshwater SedimentDLMPAEGHHGMLIYKYRLVGYSVSQLDHEKFAAGAKQKVAQGACNRPETRDDFLKNGVTLRYSYFDKDKRHIATVDVTPADCGF*
Ga0075418_1196117013300009100Populus RhizospherePPRRSPVNTLPLRLPPVTFAKQKLTQTVCNEPVMRDDLVKKGVTLRYSYFDKDKQPIASVDVTPADWGF*
Ga0066709_10419358423300009137Grasslands SoilVSYSAAQIDSKRFAAGAKQRVVQGACNTPETRDDFLKKGVTLRYSYYDKDKKPIATIDVKPADCGF*
Ga0114129_1244474713300009147Populus RhizosphereQLDHQKFAAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFDVTPADCGF
Ga0113563_1229870513300009167Freshwater WetlandsFAAGARERVVQNACSRPETRDDFLNKCVTLRYSYFDKDKQHIVTIDVTPKDCGF*
Ga0105242_1186298323300009176Miscanthus RhizosphereQIDPRKFAAGVKEKVTQGACSRPETRDDFLKNGVTLRYSYFDKENKHIATVDVTPADCGF
Ga0105347_121227813300009609SoilETELMPTSGHDGMLIYNYRLVSYSWKDFDYQRFAAGARERLVQNACSRPETRDDFLKKGVTLRYSYFDKDKQHVATIDITPKDCGF*
Ga0126380_1126566623300010043Tropical Forest SoilAGAKERLKEGACNRPETRDNLLRKGVTLRYSYFDKEKQHIATIDVMLADCGF*
Ga0126380_1171506013300010043Tropical Forest SoilHNRFAAGAKERLKEGACNRPETRDNFLKKDVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0126378_1044793113300010361Tropical Forest SoilVNVSAAQVDHNRFAAGAKERLREGACNRPETRDNFLKKDVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0126377_1175840413300010362Tropical Forest SoilNYRLVNVSAAQVDHNRFAAGAKERLREGACNRPETRDNFLKKDVTLRYSYFDKDKQHIATVDVAPADCGF*
Ga0136847_1010273213300010391Freshwater SedimentIDKETELMPVAGAPGMLIYNYRLVGYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVAPADCGF*
Ga0127502_1068184723300011333SoilAKFATGAKERVTQGACNRPETREDLLKQGVTLRYTYFDKDKQHIATIDVLPADCDS*
Ga0137323_102444713300011409SoilLVEGHEAMLIYKYRLVPYSVSQLDHQKFAAGAKQKVAQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPTDCGF*
Ga0137429_101163933300011437SoilVEGYEGMLIYKYRLVPYSVKQLNHVKFAAGAKQKVAQGACNQPEMRDDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0137451_107484723300011438SoilNYAVKNLDHQRFAAGARDRLVQGACSRPETRDDFLKKGVTLRYSYFDKDKQHIATLDVTPKDCGS*
Ga0137329_104380213300012133SoilQRFAATAKPQLIKATCTRPETSEEFLKKGVTLRYSYFDKDKKHIATLDVTPADCGF*
Ga0137327_106480513300012173SoilQKFAAGAKQKVAQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0137382_1023117413300012200Vadose Zone SoilKRFAAGAKQRVVKGACSTPETRDDFLKKGVTLRYSYYDKDKKPIATIDVKPADCGF*
Ga0137374_1037739013300012204Vadose Zone SoilAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFEVAPADCGF*
Ga0137379_1141845913300012209Vadose Zone SoilTQLDHNKFAAGAKERLKQGACNRPETRDNFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0137378_1017118913300012210Vadose Zone SoilKYSVSELDHQKFAAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFDVTPADCGF*
Ga0137435_106404313300012232SoilYRLVPYSVSQLDHQKFAAGAKQKVAQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPTDCGF*
Ga0137367_1062397813300012353Vadose Zone SoilKFAAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFDVAPADCGF*
Ga0137369_1050866413300012355Vadose Zone SoilMLIYNYRLVKYSVSELDHQKFAAGAKQKVTQGVCNQPEMRDDFLKKGVTLRYSYFDKDKQHIATFEVAPADCGF*
Ga0137385_1076931613300012359Vadose Zone SoilVKFAAGIKQKVTQEACNRAETRDDFLKKGVTLRYSYFAKDKQHIATVDVTPADCGF*
Ga0157337_100493513300012483Arabidopsis RhizosphereLIYNYRLVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0157313_106823313300012503Arabidopsis RhizosphereKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF*
Ga0137359_1028996813300012923Vadose Zone SoilNYRLVSYSVSQLDPRRFAAGAQQRIAQSVCSRPETRDDFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF*
Ga0137407_1194888623300012930Vadose Zone SoilEGMLIYNYRLVSYSAAQIDSKRFAAGAKQRVVQGACNTPETRDDFLKKGVTLRYSYYDKDKKPIATIDVKPADCGF*
Ga0157307_118414213300013096SoilTGTEGMLIYNYRLVSYSVSQLNASKFAAGAKERVRQGVCNRPETRDDLLKQRVALRYSYFDKDKQHIATIDVLPADCGF*
Ga0075320_101174923300014255Natural And Restored WetlandsEAMLVYNYRLIKFSVGQIDHQKFAAGAKQRVTQGACNQPVMRDDFLKQGVTLRYSYFDKNKQHIATVEVTPADCGF*
Ga0075320_103084213300014255Natural And Restored WetlandsAAHAMLIYNYRLVKYSVTKLDHQKFAAGAKQRVTQGACSRPETRDGFLKAGVTLRYSYFDKDKRHVATVDVTPADCGF*
Ga0075323_100374413300014301Natural And Restored WetlandsSVTKLDHQKFAAGAKQRVTQGACSRPETRDGFLKAGVTLRYSYFDKDKRHVATVDVTPADCGF*
Ga0075331_101239233300014310Natural And Restored WetlandsQSGEARLVYNYRLIKFSVGQSDHQKFAAGAKQRVTQGACNQPVMRDDFLKQGVTLRYSYFDKNKQHIATVEVTPADCGF*
Ga0075316_110618213300014314Natural And Restored WetlandsAEYATLIYHYRLVKYSVSQLDREKFAAGAKQRVTQGACNRPETRDDFLKKGVTLRYSYFDKDQKPIATIDVTPADCGF*
Ga0180062_107080713300014879SoilRFATGAKEKLTQGACNRPETRDDFLKKGVTLRYSYFDRDKQHIATVDVAPSDCGF*
Ga0180082_108534523300014880SoilQRFAAGARDRVVQGACSRTETRDDFLKKGVTLRYSYFDKDKQHIATIDVTPKDCGF*
Ga0134072_1023111923300015357Grasslands SoilDSKRFAAGAKQRVVQGACNTPETRDDFLKKGVTLRYSYYDKDKKPIATIDVKPADCGF*
Ga0132258_1168501223300015371Arabidopsis RhizosphereVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRPIATIDVTPTDCGF*
Ga0132258_1187963223300015371Arabidopsis RhizosphereEGMLIYNYRLVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRPIVTVDVTPADCGF*
Ga0132257_10419733713300015373Arabidopsis RhizosphereIDKETELMPTEGHEGMLVYNYRLVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRPIATIDVTPTDCGF*
Ga0132255_10599369213300015374Arabidopsis RhizosphereTELMPAEGHQGMLIYNYRLVGYSVSQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRPIATIDVTPTDCGF*
Ga0182034_1116539413300016371SoilTELMPAAGAPGMLIYNYRLVSYSVSQLDPRRFAVGAQQRIAQSVCSRPETRDDFLKKGVTLRYSYFDKDKQPIATVDVTLADCGF
Ga0134069_111480013300017654Grasslands SoilRFAAGAKQRVVQGACSTPETRDDFLKKGVTLRYSYYDKDKKPIATIDVKPADCGF
Ga0187776_1149757423300017966Tropical PeatlandAKFAAGAKQRVTQGACNAPETRDDFLKKGVTLRYSYYDKDKRHIATVDVTPTDCGF
Ga0184626_1015526813300018053Groundwater SedimentGHEGMLIYNYRLVPYSVSQLDHQKFAAGAKQKVAQGACNAPETREDFLKQGVTLRYSYFDKNKQHIATVDVTPADCGF
Ga0184640_1005425013300018074Groundwater SedimentFIAAARPQLVQTSCNRPETRNDFLTKGVTMRFSYFDKDKQHIATIDVTPADCGL
Ga0190270_1323925813300018469SoilVRQLDHQKFAAGAKQKVAQGACNAPETREDFLKQGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0193747_110802323300019885SoilYRLVSYAVAQLNPVKFAAGIKQKVTQEACNRAETRDDFLKKGVTLRYSYFAKDKQPIATVDVTPADCGF
Ga0193739_102451633300020003SoilRKFIAAARPQLVQTSCNRPETRNDFLTKGVTMRFSYFDKDKQHIATIDVTPADCGL
Ga0194121_1026813223300020200Freshwater LakeRLVPYSVGQLDHERFATGAKQRVTQGACNQTELRDDYLKNGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0210379_1005595013300021081Groundwater SedimentKETELTLVEGHEAMLIYKYRLVPYSVSQLDHQKFAAGAKQKVAQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPTDCGF
Ga0210379_1033347213300021081Groundwater SedimentLDHQKFAAGAKQRVTEGACGRPETRDEFLKMGVTLRYSYFDKDKQHIATIDVTPADCGF
Ga0210377_1062748313300021090Groundwater SedimentLVGYSVAKLDHQKFAAGAKQKVIQGACNRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0212128_1014913923300022563Thermal SpringsFAAGVKERVVQGACSRPETRDEYLKNGVTLRYSYFDKNKQHIATVDVTPADCGFR
(restricted) Ga0233425_1043325113300024054FreshwaterYKYRLVPYSVGQLDHEKFAAGAKQRVTQGACNQAELRDDFLKKGVTLRYSYFDKDKQHIATVDVVPADCGF
Ga0209322_1012264123300025146SoilDHQKFAAGAKQRVPQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209619_1005664433300025159SoilGAPGMLIYSYRLVSYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209109_1019737113300025160SoilYSVTKLDHQKFAAGAKQRVTQGACERPETRDEFLKKGVTLRYSYFDKDKQHIATIDVTPADCGF
Ga0209108_1005822533300025165SoilPGMLIYNYRLVGYSVTKLDHQKFAAGAKLRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209108_1015107613300025165SoilYRLVSYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209002_1020077613300025289SoilVSYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209002_1026506423300025289SoilRLVGYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGL
Ga0209431_1080913613300025313SoilTYNYRLVGYSVTTLDREKFAAGAKKKVSQGACGRPETRDEFLKKGVTLRYSYFDKDKRHIATVDVTPADCGF
Ga0209641_1005147943300025322SoilMLIYNYRLVSYSVTKLDHQKFAAGAKQRVTQGACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209641_1059035823300025322SoilYNYRLVGYSVTTLDREKFAAGAKKKVSQGACGRPETRDEFLKKGVTLRYSYFDKDKRHIATVDVTPADCGF
Ga0209640_1051380523300025324SoilYSVAKLDHQKFAAGAKQKVIQGACNRPETRDEFLKNGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0209640_1140269423300025324SoilLDHERFAAGAKQRVTQGACNQPDMREDYLKKGVTLRYSYFDKDQQHIATVDVTPADCGY
Ga0210143_105588823300025792Natural And Restored WetlandsIDHQKFAAGAKQRVTQGACNQPVMRDDFLKQGVTLRYSYFDKNKQHIATVEVTPADCGF
Ga0207686_1014868933300025934Miscanthus RhizosphereGYSVNQVNPQKFAAGAKQKIAQGACNQPETRDDFLKKGVTLRYAYYDKDKRHIVTVDVTPADCGF
Ga0207712_1201036513300025961Switchgrass RhizosphereMIDKETELLPSAGYDGMLVYNYRLVSYSASQIDPRKFAAGVKEKVTQGACSRPETRDDFLKNGVTLRYSYFDKDNQHIATVDV
Ga0208416_100171233300026004Rice Paddy SoilTELLPCQAAHAMLIYNYRLVKYSVTKLDHQKFAAGAKQRVTQGACSRPETRDGFLKAGVTLRYSYFDKDKRHVATVDVTPADCGF
Ga0208654_100884723300026062Natural And Restored WetlandsEAMLVYNYRLIKFSVGQIDHQKFAAGAKQRVTQGACNQPVMRDDFLKQGVTLRYSYFDKNKQHIATVEVTPADCGF
Ga0209466_110292723300027646Tropical Forest SoilDARKFAAGAKQRVTQGACGTPETRDDFLKKGVTLRYSYYDKDKQHIATFDVTPADCGF
Ga0256866_119515823300027650SoilVSYSAAQLDPQKFAAGVKEKVTQSACNRPETRDEFLKRGVTLRYSYFDKDKKHIATVDVTPADCGFS
Ga0209971_114132923300027682Arabidopsis Thaliana RhizosphereNYRLVSYSISQLDAARFAAGAKERVSQGACSRPESRDDLLKQGVTLRYSYFDKDRQHIATIDVLPADCGF
Ga0209814_1014711113300027873Populus RhizosphereLRLPPVTFAKQKLTQTVCNEPVMRDDLVKKGVTLRYSYFDKDKQPIASVDVTPADWGF
(restricted) Ga0255310_1015722523300031197Sandy SoilGMLIYNYRLVSYSVQQIDHRRFAAGARDRVVQGACSRPETRDDFLKKGVTLRYSYFDKDKQHIATIDVTPKDCGF
Ga0299914_1055319713300031228SoilSAPAMLIYNYRLVSYSVARLDAEKFATGAKQRVAQGACNQPGTRDDLLKNGVTLRYSYFDKDKQHIATIDVTPADCGF
Ga0299913_1095029113300031229SoilTELLASEAGEAMLVYNYRLVKYSAGQIDHERFAAGAKQRVTQGACSQPVMRDDFLKQGVILRYSYFDKNKQHIATVEVTPADCGF
Ga0307505_1059618313300031455SoilAAGARDRLVQGACSRPETRDDFLKKGVTLRYSYFDKDKQHIATLDVTPKDCGS
Ga0307469_1004515913300031720Hardwood Forest SoilRLVSYSAAQLDAKKFATGAQQRLKQNACTNAETRDDFLKKGVTLRYSYYDKDKQHIATVDVTPADCGF
Ga0307473_1084730113300031820Hardwood Forest SoilYRLVPYSVSQLDHQKFAAGAKQKVTQGACNQAELREDYLKKGVTLRYSYFDKDKQHIATVDVTPADCGF
Ga0307413_1176127413300031824RhizosphereGHEGMLIYNYRLVSYSVKNLDWQRFAAGARDRLVQNACSQTETREDFLKKGVTLRYSYFDKDKQHIATIDVTPKDCGF
Ga0310907_1049493413300031847SoilRLVSYSVSQLNASKFAAGAKERVRQGVCNRPETRDDLLKQRVALRYSYFDKDKQHIATIDVLPADCGF
Ga0310907_1063310613300031847SoilKNLDYRRFAAGARDRVVQGACGRPETRDDFLKKGVTLRYSYFDKDKQHIATIDVTPRDCG
Ga0307410_1149462313300031852RhizosphereTELLPAVGAEGLLTYNYRLVSYSVTQFDAARFAVGAKERVTQGACNRPETRDDLLKNGVTLRYSYYDKDKQHIATIDISSADCGF
Ga0310892_1081275213300031858SoilDHNKFAAGAKERLKEGACNRPETRDSFLKKGVTLRYSYFDKDKQHIATIDVTPADCGF
Ga0326597_1088641523300031965SoilHEKFAAGAKQKVTQGACNQAELMEDYLKKGVTLRYSYFDKDKQHIATIDVTPADCGF
Ga0307414_1168720113300032004RhizosphereEYLNKVATDINRSVPVMIDAETELLPSTAGYAMLVYNYRLVKYSVRQLDHQKFAAGAKQKIVQAACNRPETRDGFLKEGVTLRYSYFDKDKQHIATVEVVPADCGF
Ga0307470_1146393023300032174Hardwood Forest SoilYRLVSYSAAQLDAKKFATGAQQRLKQNACTNAETRDDFLKKGVTLRYSYYDKDKQHIATVDVTPADCGF
Ga0310889_1043930623300032179SoilYNYRLVSYSVSQLNASKFAAGAKERVRQGVCNRPETRDDLLKQRVALRYSYFDKDKQHIATIDVLPADCGF
Ga0214472_1053771423300033407SoilFAATAKPQLVQATCSRPETSEEFLKKGVTLRYSYFDKDKTHIATLDVTPADCGF
Ga0214471_1040791113300033417SoilFAGQIDHQKFAAGAKQKVTQGACNQTEMRENFLKQGVTLRYSYFDKNKQHIATVEVTPADCGF
Ga0326726_1141166623300033433Peat SoilAEGMLIYNYRLVSFSAAQLDRTKFATTAKQQVTQGACNAPDTRDNFLKKGVTLRYAYHDKDKQNIATVDVKPADCGW
Ga0316626_1015883933300033485SoilTKLDHQKFAAGAKQRVTQNACGRPETRDEFLKKGVTLRYSYFDKDKQHIATVDVTPADCG
Ga0316624_1018807323300033486SoilLMPSAAGYAMLMYNYRLVKYSVTQLDHEKFTALAKQRVTEGACNRPETRDDFLKKGVTLRFSYFDKDKKHIATIDVTPADCGF
Ga0247830_1000527383300033551SoilMIDKETELLPAVGAEGLLTYNYRLVSYSVAQFDATRFAVGAKERVTQGACNRSETRDDLLKNGVTLRYSYYDKDKQHIATIDISSADCGF
Ga0364942_0224784_434_6133300034165SedimentLDHQKFAAGAKDKVTQGACNRPETRDEFLKNGVTLRYSYFDKDKQHIATIDVTPKDCGF
Ga0314786_150095_275_4993300034664SoilMLIYNYRLVSYSVSQLNASKFAAGAKERVRQGVCNRPETRDDLLKQRVALRYSYFDKDKQHIATIDVLPADCGF


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