Metagenome / Metatranscriptome Family F055848

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	78 residues
Representative Sequence	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES
Number of Associated Samples	106
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.36 %
% of genes near scaffold ends (potentially truncated)	31.16 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (78.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.362 % of family members)
Environment Ontology (ENVO)	Unclassified (34.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.25% β-sheet: 27.50% Coil/Unstructured: 41.25%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02771	Acyl-CoA_dh_N	7.25
PF10049	DUF2283	6.52
PF13424	TPR_12	6.52
PF01156	IU_nuc_hydro	4.35
PF04255	DUF433	2.90
PF07927	HicA_toxin	2.90
PF03681	Obsolete Pfam Family	1.45
PF00528	BPD_transp_1	1.45
PF12681	Glyoxalase_2	1.45
PF13358	DDE_3	1.45
PF14076	DUF4258	1.45
PF05168	HEPN	1.45
PF13565	HTH_32	0.72
PF01609	DDE_Tnp_1	0.72
PF13176	TPR_7	0.72
PF01909	NTP_transf_2	0.72
PF08814	XisH	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	7.25
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	4.35
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	2.90
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.90
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.45
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.45
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.13 %
Unclassified	root	N/A	21.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.07 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.62 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	3.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Alcanivoracaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae	3.62 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	3.62 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.72 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.72 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Alcanivorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax	3.62 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	3.62 %
Prochlorotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae	0.72 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.72 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	3.62 %
Alcanivorax nanhaiticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → Alcanivorax nanhaiticus	2.17 %
unclassified Alcanivorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → unclassified Alcanivorax	1.45 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.72 %
Halomicronema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema	0.72 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Alphaproteobacteria bacterium MarineAlpha4_Bin1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	3.62 %
Alcanivorax nanhaiticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → Alcanivorax nanhaiticus	2.17 %
Alcanivorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → unclassified Alcanivorax → Alcanivorax sp.	1.45 %
Halomicronema hongdechloris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → Halomicronema hongdechloris	0.72 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	0.72 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10326697	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300000559\|F14TC_100139847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1688	Open in IMG/M
3300000789\|JGI1027J11758_13050684	Not Available	864	Open in IMG/M
3300000955\|JGI1027J12803_104413393	Not Available	904	Open in IMG/M
3300000955\|JGI1027J12803_106178361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300000956\|JGI10216J12902_103436117	All Organisms → cellular organisms → Bacteria → Proteobacteria	2601	Open in IMG/M
3300004463\|Ga0063356_100215180	All Organisms → cellular organisms → Bacteria → Proteobacteria	2285	Open in IMG/M
3300004463\|Ga0063356_103556166	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300004633\|Ga0066395_10812880	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300004798\|Ga0058859_10675011	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300005172\|Ga0066683_10232697	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300005174\|Ga0066680_10324249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → unclassified Alcanivorax → Alcanivorax sp.	983	Open in IMG/M
3300005177\|Ga0066690_10782235	Not Available	622	Open in IMG/M
3300005178\|Ga0066688_10490563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	792	Open in IMG/M
3300005179\|Ga0066684_10675673	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005180\|Ga0066685_10329380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → unclassified Alcanivorax → Alcanivorax sp.	1059	Open in IMG/M
3300005294\|Ga0065705_10631721	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300005332\|Ga0066388_104501380	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005332\|Ga0066388_105165354	Not Available	663	Open in IMG/M
3300005332\|Ga0066388_105252378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → Alcanivorax nanhaiticus	657	Open in IMG/M
3300005340\|Ga0070689_101282196	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300005447\|Ga0066689_10079293	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300005554\|Ga0066661_10733419	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300005586\|Ga0066691_10951469	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005713\|Ga0066905_101636026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → Alcanivorax nanhaiticus	590	Open in IMG/M
3300005764\|Ga0066903_100294752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2559	Open in IMG/M
3300005764\|Ga0066903_101384599	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005937\|Ga0081455_10184868	All Organisms → cellular organisms → Bacteria → Proteobacteria	1575	Open in IMG/M
3300005937\|Ga0081455_10883836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Alcanivoracaceae → Alcanivorax → Alcanivorax nanhaiticus	556	Open in IMG/M
3300005985\|Ga0081539_10044070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2578	Open in IMG/M
3300006049\|Ga0075417_10465669	Not Available	632	Open in IMG/M
3300006194\|Ga0075427_10079085	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300006796\|Ga0066665_10292184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300006797\|Ga0066659_10428562	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300006844\|Ga0075428_100656458	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300006844\|Ga0075428_101171208	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300006844\|Ga0075428_101286129	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006846\|Ga0075430_100415145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300006853\|Ga0075420_100459622	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300006904\|Ga0075424_102135996	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300007265\|Ga0099794_10428680	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300009038\|Ga0099829_10031865	All Organisms → cellular organisms → Bacteria → Proteobacteria	3765	Open in IMG/M
3300009038\|Ga0099829_11256309	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300009088\|Ga0099830_11000493	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300009090\|Ga0099827_10133307	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300009090\|Ga0099827_10231130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1548	Open in IMG/M
3300009090\|Ga0099827_11240874	Not Available	648	Open in IMG/M
3300009090\|Ga0099827_11588286	Not Available	570	Open in IMG/M
3300009094\|Ga0111539_13113722	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009101\|Ga0105247_10351498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	1037	Open in IMG/M
3300009137\|Ga0066709_100085429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3788	Open in IMG/M
3300009147\|Ga0114129_10198306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2721	Open in IMG/M
3300009147\|Ga0114129_10628972	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300009156\|Ga0111538_10564838	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300009162\|Ga0075423_11133353	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009678\|Ga0105252_10303906	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300009792\|Ga0126374_10045038	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300010043\|Ga0126380_10382076	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300010047\|Ga0126382_10795951	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300010047\|Ga0126382_11109472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	702	Open in IMG/M
3300010047\|Ga0126382_12215461	Not Available	529	Open in IMG/M
3300010145\|Ga0126321_1206114	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300010359\|Ga0126376_11455900	Not Available	712	Open in IMG/M
3300010359\|Ga0126376_11648265	Not Available	675	Open in IMG/M
3300010360\|Ga0126372_11496212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	711	Open in IMG/M
3300010360\|Ga0126372_11564941	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010360\|Ga0126372_11942373	Not Available	634	Open in IMG/M
3300011269\|Ga0137392_11481787	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300011270\|Ga0137391_11540856	Not Available	509	Open in IMG/M
3300011271\|Ga0137393_11418833	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300011445\|Ga0137427_10221072	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012199\|Ga0137383_10128332	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300012201\|Ga0137365_10270389	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300012201\|Ga0137365_10513169	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012203\|Ga0137399_11027310	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300012207\|Ga0137381_10176417	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300012209\|Ga0137379_10206768	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300012210\|Ga0137378_10222424	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300012210\|Ga0137378_11361387	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300012351\|Ga0137386_10383484	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	1012	Open in IMG/M
3300012351\|Ga0137386_10428116	Not Available	953	Open in IMG/M
3300012356\|Ga0137371_10296293	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300012356\|Ga0137371_10350183	Not Available	1148	Open in IMG/M
3300012357\|Ga0137384_10264765	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300012357\|Ga0137384_10985441	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012359\|Ga0137385_10362169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300012362\|Ga0137361_10334018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1390	Open in IMG/M
3300012496\|Ga0157353_1029968	Not Available	575	Open in IMG/M
3300012514\|Ga0157330_1030906	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300012917\|Ga0137395_11090715	Not Available	566	Open in IMG/M
3300012922\|Ga0137394_10770578	Not Available	807	Open in IMG/M
3300012929\|Ga0137404_11512968	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300012944\|Ga0137410_11821711	Not Available	538	Open in IMG/M
3300012948\|Ga0126375_11242770	Not Available	622	Open in IMG/M
3300012948\|Ga0126375_11397343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	593	Open in IMG/M
3300014154\|Ga0134075_10460985	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300014968\|Ga0157379_10499117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1128	Open in IMG/M
3300015245\|Ga0137409_10864808	Not Available	739	Open in IMG/M
3300015371\|Ga0132258_10686457	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300015371\|Ga0132258_11754401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	1565	Open in IMG/M
3300015372\|Ga0132256_101844961	Not Available	712	Open in IMG/M
3300015372\|Ga0132256_103366320	Not Available	538	Open in IMG/M
3300015374\|Ga0132255_105195694	Not Available	551	Open in IMG/M
3300016422\|Ga0182039_11940031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	541	Open in IMG/M
3300017997\|Ga0184610_1110036	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300017997\|Ga0184610_1266035	Not Available	568	Open in IMG/M
3300018056\|Ga0184623_10020954	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300018063\|Ga0184637_10028869	All Organisms → cellular organisms → Bacteria	3348	Open in IMG/M
3300018063\|Ga0184637_10067317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	2192	Open in IMG/M
3300018063\|Ga0184637_10464463	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300018078\|Ga0184612_10566334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Prochlorotrichaceae → Halomicronema → Halomicronema hongdechloris	544	Open in IMG/M
3300018079\|Ga0184627_10043980	All Organisms → cellular organisms → Bacteria → Proteobacteria	2296	Open in IMG/M
3300018079\|Ga0184627_10143815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1264	Open in IMG/M
3300018082\|Ga0184639_10273928	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300018433\|Ga0066667_11420882	Not Available	610	Open in IMG/M
3300018466\|Ga0190268_10041047	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300019249\|Ga0184648_1317643	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300019259\|Ga0184646_1491104	Not Available	545	Open in IMG/M
3300019259\|Ga0184646_1519600	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300019458\|Ga0187892_10133891	All Organisms → cellular organisms → Bacteria → Proteobacteria	1415	Open in IMG/M
3300020063\|Ga0180118_1219854	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300025936\|Ga0207670_10814104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	779	Open in IMG/M
3300026328\|Ga0209802_1173199	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300027835\|Ga0209515_10250048	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300027846\|Ga0209180_10429852	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300027873\|Ga0209814_10256012	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300027875\|Ga0209283_10088138	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300027882\|Ga0209590_10766217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin1	615	Open in IMG/M
3300027909\|Ga0209382_10523547	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300027909\|Ga0209382_10538924	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300030006\|Ga0299907_10305757	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300030830\|Ga0308205_1056069	Not Available	534	Open in IMG/M
3300031093\|Ga0308197_10208968	Not Available	669	Open in IMG/M
3300031421\|Ga0308194_10060748	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031719\|Ga0306917_11515034	Not Available	516	Open in IMG/M
3300031954\|Ga0306926_11932118	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300032025\|Ga0318507_10454085	Not Available	558	Open in IMG/M
3300034662\|Ga0314783_004874	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.99%
Host-Associated	Host-Associated	21.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.94%
Plants	Host-Associated → Plants	20.29%
Aquatic	Environmental → Aquatic	13.04%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.49%
Sediment	Environmental → Aquatic → Sediment	8.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.80%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Cave	Environmental → Terrestrial → Cave	0.72%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_103266973	3300000550	Soil	MTPYVQHVRFRKFCPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDELYAILLQGKRLLEEEMAYES*
F14TC_1001398473	3300000559	Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDELYAILLQGKRLLEAEMACGI*
JGI1027J11758_130506841	3300000789	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKXFKLDDLHAILMQGKRLLEE
JGI1027J12803_1044133931	3300000955	Soil	MSSKXXXXDREYPIFELVEGDDVLLDVSSSDTGVLEVALHEASVGKVFKLDDLHAILMQGKRLLEEEMAYES*
JGI1027J12803_1061783611	3300000955	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKLFKLDDLHAILMQGKRL
JGI10216J12902_1034361172	3300000956	Soil	MTPYVQQVRFRKFCPVDREYPIFELVEGDNVLLDVSSSDAGVLEVALHEASRGKVFKLDDLHALLMQGKRLLEEEMACES*
Ga0063356_1002151803	3300004463	Arabidopsis Thaliana Rhizosphere	MTHYVKDVRFRKFASVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEEMAYES*
Ga0063356_1035561661	3300004463	Arabidopsis Thaliana Rhizosphere	MTLYVKHVRFRKFVPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHKASIGKVFKLDDLQAILMQGKRLLEEEMAYES*
Ga0066395_108128801	3300004633	Tropical Forest Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKFDDLHAILMQGKRLLEEEMAYES*
Ga0058859_106750111	3300004798	Host-Associated	TMTPYVQHVRFRKFSPVDRESPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEDMAYES*
Ga0066683_102326971	3300005172	Soil	MTPYVQHVRFRKFCPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0066680_103242491	3300005174	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0066690_107822351	3300005177	Soil	MTPYVQHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKLFKLDDLQAILMQGKRLLEEEMAYEP*
Ga0066688_104905631	3300005178	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKLFKLDDLQAILM
Ga0066684_106756731	3300005179	Soil	YVKHVRFRKFSPVDREYRIFELVEGDDVLLDVSSSDDGILEVALHEASRGKIFKLDDLHTILMQGKRLLEEEMAYEA*
Ga0066685_103293801	3300005180	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYES*
Ga0065705_106317211	3300005294	Switchgrass Rhizosphere	MAPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0066388_1045013802	3300005332	Tropical Forest Soil	MTQYVKQVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0066388_1051653542	3300005332	Tropical Forest Soil	MTPYVKDVRFRKFAPVDREYPIFELVEGDHVLLDVSSSDDGVLEVALHEASIGKLFKLDDLHAILMQGKRLLEEEMAYES*
Ga0066388_1052523782	3300005332	Tropical Forest Soil	MTQYVKHVRFRKFSPIEREYPVFELIEGDDVLLDISSSDDGVLEVALHEASIGKIFTLDDLHAILMQGKRLLEEELAYES*
Ga0070689_1012821961	3300005340	Switchgrass Rhizosphere	MTPYVQHVRFRKFSPVDRESPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEDMAYES*
Ga0066689_100792931	3300005447	Soil	VDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0066661_107334191	3300005554	Soil	IATMTPYVQHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0066691_109514691	3300005586	Soil	MTPYVQHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEIAYES*
Ga0066905_1016360262	3300005713	Tropical Forest Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDELHTILMQGKRLLEEEMACES*
Ga0066903_1002947523	3300005764	Tropical Forest Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKFDDLHAILMQGKRLLEEERACES*
Ga0066903_1013845992	3300005764	Tropical Forest Soil	MALWGIAVMTPYVQHVRFRKFAPVDRKYPIFELVEGDDALLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKCLLEEEMAYES*
Ga0081455_101848682	3300005937	Tabebuia Heterophylla Rhizosphere	MTPYVKHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0081455_108838362	3300005937	Tabebuia Heterophylla Rhizosphere	MTQYVKHVRFRKFAPVDREYPIFELVEDDNVLLDISASDEGVIEVALHEAGTGKIFKLDELHAILLQGKRLLEEELACGL*
Ga0081539_100440703	3300005985	Tabebuia Heterophylla Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKVFKLDDLHAILLQGKRLLEEEIAYES*
Ga0075417_104656691	3300006049	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEE
Ga0075427_100790852	3300006194	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0066665_102921842	3300006796	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEELAYES*
Ga0066659_104285623	3300006797	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0075428_1006564583	3300006844	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASREKVFKLDDLHAILMQGKRLLEEEMACES*
Ga0075428_1011712082	3300006844	Populus Rhizosphere	FELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0075428_1012861293	3300006844	Populus Rhizosphere	VDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEELAYES*
Ga0075430_1004151452	3300006846	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHAAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0075420_1004596221	3300006853	Populus Rhizosphere	HVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0075424_1021359963	3300006904	Populus Rhizosphere	PYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0099794_104286803	3300007265	Vadose Zone Soil	RKFCPVDREHPIFELVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0099829_100318652	3300009038	Vadose Zone Soil	MTPYVQHVRFRKFSPVDPEYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0099829_112563091	3300009038	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEEIAYES*
Ga0099830_110004932	3300009088	Vadose Zone Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0099827_101333072	3300009090	Vadose Zone Soil	MTQYVKHVRFRKFFPVDREYPIFELVAGDEILLDVSVSDDGVPEVALHEASIGKIFKFDDLHAFLVQGKRLLEEEMAYES*
Ga0099827_102311302	3300009090	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASMGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0099827_112408742	3300009090	Vadose Zone Soil	VHRRIATMTPYVQHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0099827_115882861	3300009090	Vadose Zone Soil	MTPYVQHVRFRKFAPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0111539_131137221	3300009094	Populus Rhizosphere	IFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0105247_103514983	3300009101	Switchgrass Rhizosphere	MAPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGALEVALHEASRGKVFKLDDLHAILMQGKRLLEEDMAYES*
Ga0066709_1000854293	3300009137	Grasslands Soil	MTPYVQHVRFRKFAPVDREYPIFELVEGDDVLLDVGSSDAGVLDVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0114129_101983064	3300009147	Populus Rhizosphere	MTSYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0114129_106289722	3300009147	Populus Rhizosphere	MTQYVKHVRFRKFCPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASVGKVFKLDDLHALLMQGKRLLEEEMAYES*
Ga0111538_105648383	3300009156	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDHVLLDVSSGDDGVLEVALHEASIGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0075423_111333533	3300009162	Populus Rhizosphere	MQQYLQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0105252_103039061	3300009678	Soil	MTQYVKHIRFRKFSPVDREYPIFELVEGDHVLLDVSSSDDGVLEVALHEASIGKVFKFDDLHAILMQGKRLLEEEMAYGS*
Ga0126374_100450382	3300009792	Tropical Forest Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDAGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEDMAYEA*
Ga0126380_103820763	3300010043	Tropical Forest Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMTYES*
Ga0126382_107959512	3300010047	Tropical Forest Soil	MTQYVKHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLEDLHAILVQGKRLLEEEMAYEL*
Ga0126382_111094723	3300010047	Tropical Forest Soil	MAFWGIASMTPYVQHVRFRKFCPVDREYPIFEVVEGDDVLLDVSSSDDGVLEVALHEASIGKVFKFDDLHAILMQGKRLLEEEMAYE
Ga0126382_122154611	3300010047	Tropical Forest Soil	MTPYVQHVWFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASKGKVFKLDDLHAILMQGNRLLEEEMAYES*
Ga0126321_12061142	3300010145	Soil	MAPYVQHVRFRKFSPIDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKVLKLDDLHTILMQGKRLLEEEMAYES*
Ga0126376_114559002	3300010359	Tropical Forest Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDHILLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0126376_116482651	3300010359	Tropical Forest Soil	KFSPVNREHPILEVVEGDDVLLDVSSSDDRGLEAPLHAASIGKIFKLDDLHTILMQGKRLLEEDMAYEA*
Ga0126372_114962121	3300010360	Tropical Forest Soil	PVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEVSRGKVFKFDDLHAILMQGKRLLEEEMAYES*
Ga0126372_115649413	3300010360	Tropical Forest Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDAGVLEVALHEASVGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0126372_119423732	3300010360	Tropical Forest Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0137392_114817871	3300011269	Vadose Zone Soil	MTQYVKHVWFRKFFPVDREYPIFELVEGDDILLDVSISDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLL
Ga0137391_115408562	3300011270	Vadose Zone Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEEIAYES*
Ga0137393_114188332	3300011271	Vadose Zone Soil	MTQYVKHVRFRKFSPLDREYPIFELVEGDDALLDVSISNDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEEL
Ga0137427_102210723	3300011445	Soil	FSPVDREYPIFELVEGDHVLLDVSSSDDGVLEVALHEASIGKVFKFDDLHAILMQGKRLLEEEMAYGS*
Ga0137383_101283322	3300012199	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKLFKLDDLQAILMQGKRLLEEEMAYEP*
Ga0137365_102703893	3300012201	Vadose Zone Soil	KHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYES*
Ga0137365_105131692	3300012201	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELAEEDDVLLDVSVSDDGILEVALHEACIGKVFKLDDLHAILMQGKHLLEEEMAYES*
Ga0137399_110273102	3300012203	Vadose Zone Soil	MTPYVQHVRFRKFCPVDREHPIFELVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0137381_101764172	3300012207	Vadose Zone Soil	MTQYVQHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0137379_102067681	3300012209	Vadose Zone Soil	PVDREYPIFELAEEDDVLLDVSVSDDGILEVALHEACIGKVFKLDDLHAILMQGKQLLEEEMAYES*
Ga0137378_102224244	3300012210	Vadose Zone Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKQLLEEEMAYES*
Ga0137378_113613871	3300012210	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELAEEDDVLLDVSVSDDGILEVALHEASIGKLFKLDDLQAILMQGKRLLGEEMAYEP*
Ga0137386_103834843	3300012351	Vadose Zone Soil	PIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP
Ga0137386_104281162	3300012351	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS*
Ga0137371_102962931	3300012356	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDRVLEVALHEASIGKIFKLDDLHALLMQGKRLLEEEMAYES*
Ga0137371_103501831	3300012356	Vadose Zone Soil	MIQYVKDVRFRKFAPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASVGKVFKLDDLHAILMQGKRLLEEEIAYES*
Ga0137384_102647654	3300012357	Vadose Zone Soil	VKHVRFRKFSPVDREYPIFEFVEGDNVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKHLLEEEMAYES*
Ga0137384_109854411	3300012357	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELAEEDDVLLDVSVSDDGILEVALHEACIGKVFKLDDLHAILMQGKQLLEEEM
Ga0137385_103621692	3300012359	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP*
Ga0137361_103340184	3300012362	Vadose Zone Soil	QYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0157353_10299682	3300012496	Unplanted Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDAGVLGVALHEASVGKVFKLDDLYAILMQGKRLLEEDMAYES*
Ga0157330_10309062	3300012514	Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGILEVALHEASRGKVFKFDDLHAILMQGKRLLEEEMACES*
Ga0137395_110907152	3300012917	Vadose Zone Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0137394_107705781	3300012922	Vadose Zone Soil	LVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0137404_115129682	3300012929	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDEILLDVSVSDDGVPEVALHEASIGKIFKLDDLHAILVQGKRLLEEEVAYES*
Ga0137410_118217111	3300012944	Vadose Zone Soil	MQHVRFRKFCPVDREHPIFELVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0126375_112427701	3300012948	Tropical Forest Soil	MTSYVKHVRFQKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLQAILMQGKRLLEEEMACES*
Ga0126375_113973431	3300012948	Tropical Forest Soil	IVTMTPYVKDVRFRKFAPVDREYSIFEVVEGDDVLLDVSSSDDGVLEVALHEASIGKVFKLDDLHAILMQGKRLLEEEMAYES*
Ga0134075_104609852	3300014154	Grasslands Soil	MTQYVKHVRFRKFSPVDREYPIFELVKGDNVLLDVSSSDDGVLEVALHEASIGKLFKLDDLQAILMQGKR
Ga0157379_104991171	3300014968	Switchgrass Rhizosphere	MAPYVQHVRFRKFSPVDRESPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEDMAYES*
Ga0137409_108648082	3300015245	Vadose Zone Soil	TPYAQHVRFRKFCPVDREHPIFELVEGDEVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEEMAYES*
Ga0132258_106864571	3300015371	Arabidopsis Rhizosphere	KHVRFRKFVPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHKASIGKVFKLDDLHAILMQGKRLLEEEMTYES*
Ga0132258_117544013	3300015371	Arabidopsis Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGILEVALHEASRGKVFKFDDLHAILMQGKRLLEEEMACES*
Ga0132256_1018449611	3300015372	Arabidopsis Rhizosphere	KHVRFRKFVPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHKASIGKVFKLDDLQAILMQGKRLLEEEMTYES*
Ga0132256_1033663201	3300015372	Arabidopsis Rhizosphere	VRPLPCRAYVKHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALREASRGKVFKLDDLHAILMQGKRLLEEEMACES*
Ga0132255_1051956942	3300015374	Arabidopsis Rhizosphere	MTSYVKHVRFRKFAPVDREYPIFELVEGDDVLLDVSSSDAGVLGVALHEASVGKVFKLDDLYAILMQGKRLLEEDMAYES*
Ga0182039_119400311	3300016422	Soil	MAFWGIAAMTPYVKDVRFRKFCPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHEASARKVFKLDDLHAILIQGKR
Ga0184610_11100362	3300017997	Groundwater Sediment	MKQYVKHVWFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEMAYES
Ga0184610_12660351	3300017997	Groundwater Sediment	MTQYVQNIRFRKFAPVDREYPIFEWVEGDDVLLDVGVSDDGVLEVALHEAGGGRVFKLDDLHAILMHGKRLLEKEMACGS
Ga0184623_100209544	3300018056	Groundwater Sediment	MTQYVKHVRFRKFSPVDREYSIFELVEGDDILLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEMAYES
Ga0184637_100288692	3300018063	Groundwater Sediment	MTQYVKHARFRKFSPVDREYSIFELVEGDDILLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEIAYES
Ga0184637_100673171	3300018063	Groundwater Sediment	LAHRLARSLGSSVHRGIAAMTQYVKQVRFRKFSPLDREYPIFELVEGDNVLLDVSISDDGVLEVALHEASIGKLFKLDDLHAILMQGKRLLEEEMAYES
Ga0184637_104644631	3300018063	Groundwater Sediment	LDREYPIFELVEGDDILLDVSISDDGVREVALHEASKGKIFKLDDLHAILMQGKRLLEEEMAYES
Ga0184612_105663341	3300018078	Groundwater Sediment	RGIAAMTQYVKHARFRKFSPVDREYSIFELVEGDDILLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEMAYES
Ga0184627_100439801	3300018079	Groundwater Sediment	MTQYVKQVRFRKFSPLDREYPIFELVEGDNVLLDVSISDDGVLEVALHEASIGKLFKLDDLHAILMQGKRLLEEEMAYES
Ga0184627_101438153	3300018079	Groundwater Sediment	MTQYVKHVRFRKFSPVDREYSIFELVEGDDILLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEIAYES
Ga0184639_102739281	3300018082	Groundwater Sediment	YVKHARFRKFSPLDREYPIFELVEGDDILLDVSSSDDGVLEVALHEASKGKIFKLDDLHTILMEGKRLIEEEMAYES
Ga0066667_114208822	3300018433	Grasslands Soil	MTPYVQHVRFRKFAPVDHEYPIFELVEGDDVLLDVGSSDAGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES
Ga0190268_100410471	3300018466	Soil	MTQYVKHIRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKFDDLHAILMQGKRLLEEQMAYES
Ga0184648_13176432	3300019249	Groundwater Sediment	LGSSVHRGTATMTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEASIGKIFKLDELHTILMQGKRLLEEEMAYES
Ga0184646_14911041	3300019259	Groundwater Sediment	MTQYVQNIRLREFAPVDREYPIFEWVEGDDVLLDVGVSDDGVLEVALHEAGGGRVFKLDDLHAILMHGKRLLEKEMACGS
Ga0184646_15196001	3300019259	Groundwater Sediment	PIFELVEGDDVLLDVSSSDDGVLEVALHEASKGKIFKLDDLHAILMEGKRLIEEEMAYES
Ga0187892_101338911	3300019458	Bio-Ooze	MAQYVQNVRFRKFAPVDREYPIFELVEGDDVLFDVSASDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMACGS
Ga0180118_12198542	3300020063	Groundwater Sediment	MTQYVKHVRFRKFSPVDREYPIFELVEGDHVLLDVSSSDDGVLEVALHEAIIGKIFKLDELHTILMQGKRLLEEEMAYES
Ga0207670_108141042	3300025936	Switchgrass Rhizosphere	MTPYVQHVRFRKFSPVDRESPIFELVEGDDVLLDVSSSDDGVLEVALHEASRGKVFKLDDLYAILMQGKRLLEEDMAYES
Ga0209802_11731992	3300026328	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEEMAYGS
Ga0209515_102500483	3300027835	Groundwater	MTQYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSISDDGVLEVALHEASIGKLFKLDDLHAILMQGKHLLEEEMAYEP
Ga0209180_104298521	3300027846	Vadose Zone Soil	MTPYVQHVRFRKFSPVDREYPIFELVEGDKVLLDVSSNDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP
Ga0209814_102560122	3300027873	Populus Rhizosphere	MTPYVQHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES
Ga0209283_100881382	3300027875	Vadose Zone Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDDILLDVSSSDDGVLEVALHEASRGKIFKLDDLHAILMQGKRLLEEELAYEP
Ga0209590_107662172	3300027882	Vadose Zone Soil	VRFRKFSPVDREYPIFELVEGDDILLDVSSSDDGVLEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES
Ga0209382_105235474	3300027909	Populus Rhizosphere	VRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGVLEVALHEAGRGKVFKLDDLHAILMQGKRLLEEEMAYES
Ga0209382_105389245	3300027909	Populus Rhizosphere	MTQYVKHVRFRKFSPVDREYPIFELVEGDNVLLDVSSSDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEELAYES
Ga0299907_103057572	3300030006	Soil	VKNVRFRKFSPVDREYPIFELVEGADVLLDVSASDDGVLEVALHEAGRGKIFKYDDLYAILIQGKRLLEEEMACGS
Ga0308205_10560691	3300030830	Soil	YVKHVRFRKFSPLDREYPIFELVEVDDVLLDVSISDDGVLEVALHEASIGKIFKLDDLHAILVQGKRLLEEEVAYES
Ga0308197_102089682	3300031093	Soil	MTQYVKHVRFRKFSPVDREYPIFELVEGDEILLDVSVSDDGVPEVALHEASIGKIFKLDDLHAILVQGKHLLEEEMAYES
Ga0308194_100607482	3300031421	Soil	MTQYVKHVRFRKFSPLDREYPIFELVEGDDVLLDVSISDDGVLEVALHEASIGKIFKLDDLHAILMQGKRLLEEDMAYEP
Ga0306917_115150341	3300031719	Soil	MAFWGIAAMTPYVKDVRFRKFCPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHEASARKVFKLDDLHAIL
Ga0306926_119321181	3300031954	Soil	MAFWGIAAMTPYVKDVRFRKFCPVDREYPIFELVEGEDVLLDVSSSDDGVLEVALHEASARKVFKLDDLHAILIQGKRLLEEEMAYES
Ga0318507_104540852	3300032025	Soil	MTPYVKHVRFRKFSPVDREYPIFELVEGDDVLLDASSSDDGVLEVALHEASRGKVFKLEDLHAILVQGRRLLEEEMAYES
Ga0314783_004874_1428_1670	3300034662	Soil	MTSYVKHVRFRKFSPVDREYPIFELVEGDDVLLDVSSSDDGILEVALHEASRGKVFKLDDLHAILMQGKRLLEEEMAYES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences