Metagenome / Metatranscriptome Family F055801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055801
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	84 residues
Representative Sequence	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGV
Number of Associated Samples	106
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.18 %
% of genes near scaffold ends (potentially truncated)	89.13 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.565 % of family members)
Environment Ontology (ENVO)	Unclassified (39.855 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.304 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.36% β-sheet: 0.00% Coil/Unstructured: 44.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03631	Virul_fac_BrkB	5.07
PF00069	Pkinase	2.90
PF05974	DUF892	2.17
PF12732	YtxH	1.45
PF01435	Peptidase_M48	1.45
PF04972	BON	1.45
PF06348	DUF1059	1.45
PF07311	Dodecin	0.72
PF02518	HATPase_c	0.72
PF04519	Bactofilin	0.72
PF08448	PAS_4	0.72
PF12779	WXXGXW	0.72
PF11821	ActD	0.72
PF01740	STAS	0.72
PF07238	PilZ	0.72
PF13466	STAS_2	0.72
PF03544	TonB_C	0.72
PF13426	PAS_9	0.72
PF13561	adh_short_C2	0.72
PF01152	Bac_globin	0.72
PF05532	CsbD	0.72
PF00072	Response_reg	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.59
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	5.07
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	2.17
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.72
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.72
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.72
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
All Organisms	root	All Organisms	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
cellular organisms	root	All Organisms → cellular organisms	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.17 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.17 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.45 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.07 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.17 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.45 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	3.62 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.45 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.45 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.87 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.45 %
Nocardia testacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia testacea	0.72 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10593181	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300004115\|Ga0058890_167784	Not Available	574	Open in IMG/M
3300004120\|Ga0058901_1492240	Not Available	572	Open in IMG/M
3300005181\|Ga0066678_10912287	Not Available	574	Open in IMG/M
3300005330\|Ga0070690_100405464	Not Available	1002	Open in IMG/M
3300005338\|Ga0068868_101569799	Not Available	618	Open in IMG/M
3300005367\|Ga0070667_102331322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia testacea	504	Open in IMG/M
3300005434\|Ga0070709_10711513	Not Available	782	Open in IMG/M
3300005440\|Ga0070705_101028300	Not Available	670	Open in IMG/M
3300005535\|Ga0070684_101637068	Not Available	607	Open in IMG/M
3300005546\|Ga0070696_100792042	Not Available	780	Open in IMG/M
3300005547\|Ga0070693_100481004	Not Available	877	Open in IMG/M
3300005559\|Ga0066700_10711758	Not Available	687	Open in IMG/M
3300005564\|Ga0070664_100515465	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005602\|Ga0070762_10176462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1294	Open in IMG/M
3300005610\|Ga0070763_10177716	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005616\|Ga0068852_101940993	Not Available	611	Open in IMG/M
3300006028\|Ga0070717_10499788	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300006028\|Ga0070717_11678011	Not Available	575	Open in IMG/M
3300006052\|Ga0075029_101005505	Not Available	576	Open in IMG/M
3300006162\|Ga0075030_100132367	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300006237\|Ga0097621_101112970	Not Available	742	Open in IMG/M
3300006854\|Ga0075425_101588370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300009029\|Ga0066793_10610446	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300009038\|Ga0099829_10712593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300009038\|Ga0099829_11023053	Not Available	685	Open in IMG/M
3300009038\|Ga0099829_11036620	Not Available	680	Open in IMG/M
3300009088\|Ga0099830_11106889	Not Available	657	Open in IMG/M
3300009090\|Ga0099827_10790761	Not Available	821	Open in IMG/M
3300009098\|Ga0105245_10158053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2149	Open in IMG/M
3300009143\|Ga0099792_11225663	Not Available	510	Open in IMG/M
3300009174\|Ga0105241_10502088	Not Available	1082	Open in IMG/M
3300009174\|Ga0105241_12199646	Not Available	547	Open in IMG/M
3300009176\|Ga0105242_10497863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300010371\|Ga0134125_11594512	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	710	Open in IMG/M
3300010371\|Ga0134125_12494648	Not Available	562	Open in IMG/M
3300010375\|Ga0105239_11660932	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300010375\|Ga0105239_13331211	Not Available	523	Open in IMG/M
3300010397\|Ga0134124_12686408	Not Available	541	Open in IMG/M
3300010400\|Ga0134122_12938825	Not Available	530	Open in IMG/M
3300010401\|Ga0134121_11043478	Not Available	806	Open in IMG/M
3300012096\|Ga0137389_10065209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2799	Open in IMG/M
3300012189\|Ga0137388_10441191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300012189\|Ga0137388_10795636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012205\|Ga0137362_10222892	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M
3300012205\|Ga0137362_10648329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300012208\|Ga0137376_10484624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300012211\|Ga0137377_11545449	Not Available	589	Open in IMG/M
3300012351\|Ga0137386_10728593	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300012359\|Ga0137385_11533218	Not Available	530	Open in IMG/M
3300012362\|Ga0137361_11401794	Not Available	622	Open in IMG/M
3300012582\|Ga0137358_10860553	Not Available	597	Open in IMG/M
3300012927\|Ga0137416_10428966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300012929\|Ga0137404_10247909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1527	Open in IMG/M
3300012960\|Ga0164301_10134302	Not Available	1486	Open in IMG/M
3300012989\|Ga0164305_11772936	Not Available	556	Open in IMG/M
3300014968\|Ga0157379_10107691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2502	Open in IMG/M
3300015245\|Ga0137409_10200710	All Organisms → cellular organisms → Bacteria → Acidobacteria	1796	Open in IMG/M
3300015264\|Ga0137403_10286125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1547	Open in IMG/M
3300015371\|Ga0132258_10212507	All Organisms → cellular organisms → Bacteria → Acidobacteria	4700	Open in IMG/M
3300015371\|Ga0132258_13352645	Not Available	1101	Open in IMG/M
3300017822\|Ga0187802_10068543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1314	Open in IMG/M
3300017822\|Ga0187802_10342750	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300017993\|Ga0187823_10036959	Not Available	1299	Open in IMG/M
3300019194\|Ga0184586_124571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300019789\|Ga0137408_1018867	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300019789\|Ga0137408_1146684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1793	Open in IMG/M
3300019789\|Ga0137408_1146685	Not Available	630	Open in IMG/M
3300019879\|Ga0193723_1036610	Not Available	1467	Open in IMG/M
3300019879\|Ga0193723_1148600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300019887\|Ga0193729_1210024	Not Available	655	Open in IMG/M
3300019890\|Ga0193728_1244449	Not Available	723	Open in IMG/M
3300020581\|Ga0210399_10343122	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300020583\|Ga0210401_10003164	All Organisms → cellular organisms → Bacteria	17719	Open in IMG/M
3300021088\|Ga0210404_10497488	Not Available	688	Open in IMG/M
3300021168\|Ga0210406_10498018	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300021170\|Ga0210400_10162971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1800	Open in IMG/M
3300021170\|Ga0210400_11372740	Not Available	564	Open in IMG/M
3300021171\|Ga0210405_10064115	Not Available	2898	Open in IMG/M
3300021401\|Ga0210393_10398128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1122	Open in IMG/M
3300021403\|Ga0210397_10429272	Not Available	992	Open in IMG/M
3300021403\|Ga0210397_11465636	Not Available	530	Open in IMG/M
3300021432\|Ga0210384_10050710	All Organisms → cellular organisms → Bacteria	3772	Open in IMG/M
3300021432\|Ga0210384_10698336	Not Available	908	Open in IMG/M
3300021474\|Ga0210390_10358837	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300021479\|Ga0210410_10160185	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300021479\|Ga0210410_10558360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300021559\|Ga0210409_11382385	Not Available	580	Open in IMG/M
3300021559\|Ga0210409_11499023	Not Available	550	Open in IMG/M
3300022557\|Ga0212123_10659191	Not Available	651	Open in IMG/M
3300024330\|Ga0137417_1039308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300024330\|Ga0137417_1332302	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300025934\|Ga0207686_10889446	Not Available	718	Open in IMG/M
3300025949\|Ga0207667_10351753	Not Available	1503	Open in IMG/M
3300026067\|Ga0207678_11306305	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300026354\|Ga0257180_1063481	Not Available	534	Open in IMG/M
3300026499\|Ga0257181_1088927	Not Available	540	Open in IMG/M
3300027090\|Ga0208604_1011561	Not Available	839	Open in IMG/M
3300027288\|Ga0208525_1032569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300027635\|Ga0209625_1128611	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300027651\|Ga0209217_1173739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300027651\|Ga0209217_1197553	Not Available	541	Open in IMG/M
3300027678\|Ga0209011_1102897	Not Available	829	Open in IMG/M
3300027678\|Ga0209011_1148215	Not Available	660	Open in IMG/M
3300027727\|Ga0209328_10099850	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300027846\|Ga0209180_10474308	Not Available	703	Open in IMG/M
3300027884\|Ga0209275_10109283	Not Available	1425	Open in IMG/M
3300027884\|Ga0209275_10415450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	760	Open in IMG/M
3300027889\|Ga0209380_10257571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1025	Open in IMG/M
3300027889\|Ga0209380_10259109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1022	Open in IMG/M
3300027910\|Ga0209583_10546048	Not Available	581	Open in IMG/M
3300027911\|Ga0209698_10143586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1963	Open in IMG/M
3300028047\|Ga0209526_10465811	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300028047\|Ga0209526_10477552	Not Available	816	Open in IMG/M
3300028047\|Ga0209526_10694457	Not Available	641	Open in IMG/M
3300030659\|Ga0316363_10437324	Not Available	504	Open in IMG/M
3300031010\|Ga0265771_1014449	Not Available	624	Open in IMG/M
3300031231\|Ga0170824_118557005	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300031708\|Ga0310686_118931685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1954	Open in IMG/M
3300031716\|Ga0310813_11904331	Not Available	560	Open in IMG/M
3300031720\|Ga0307469_10148579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1750	Open in IMG/M
3300031720\|Ga0307469_10270059	Not Available	1382	Open in IMG/M
3300031823\|Ga0307478_11808567	Not Available	502	Open in IMG/M
3300031962\|Ga0307479_10820067	Not Available	905	Open in IMG/M
3300032120\|Ga0316053_103065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	976	Open in IMG/M
3300032180\|Ga0307471_101853343	Not Available	753	Open in IMG/M
3300032180\|Ga0307471_103697851	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300033412\|Ga0310810_10297118	Not Available	1738	Open in IMG/M
3300033412\|Ga0310810_10301131	Not Available	1722	Open in IMG/M
3300033475\|Ga0310811_10449910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1378	Open in IMG/M
3300033475\|Ga0310811_11204650	Not Available	622	Open in IMG/M
3300034090\|Ga0326723_0480516	Not Available	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.96%
Host-Associated	Host-Associated	13.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.16%
Plants	Host-Associated → Plants	13.04%
Aquatic	Environmental → Aquatic	5.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.62%
Sediment	Environmental → Aquatic → Sediment	2.90%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.70%
Loam	Environmental → Terrestrial → Soil → Loam	21.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.45%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004115	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019194	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_105931811	3300001686	Soil	MRFRRREPLLNILLNTGLHLIDTLRDRLPDNVDDIKGRVRGTYDTASYRVGRATNALRGEEESHIFATASTLVIGVGIGIGIGL
Ga0058890_1677841	3300004115	Forest Soil	MKSKKTGALLGVLFSTGLYLLDNLRGRLPDNVDNIRGRVRETYQTASDRLGRATNALSGKENSQIFGKVG
Ga0058901_14922401	3300004120	Forest Soil	MRFKKRESLLSALFGTGLYLLENLRERLPDNMDDMKGRAKETYETASDRLGNAADALRGKEDSDIFGKV
Ga0066678_109122872	3300005181	Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDSMEDIKGRVRDTYGTASRRVNRATNAFRGQEDSQILGKAFAMAIGVGIGVGIGLLIAPASGEQTRA
Ga0070690_1004054642	3300005330	Switchgrass Rhizosphere	MKFKKQELLLGLVLGTGLHLLDSLLERLPDNADEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLIGVG
Ga0068868_1015697992	3300005338	Miscanthus Rhizosphere	MRLRRREPLLNVLLSTGLHLIDSLRERMPDNVDDIKDRVRDTYDTASHRVSRATDALRGEEESHLFGTVGALVIGVGIGIGIGLLIAPTSGE
Ga0070667_1023313221	3300005367	Switchgrass Rhizosphere	MKFKQKELLLGVLLGTGLRLLNDLRDRLPDNMDDIKDKAKQRYRTASDRLGRASDVLRGKEESRILGNVGVLLIGVGVGVGIGLLIAPASG
Ga0070709_107115132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKKKELLLGVLLGTGLNLLSNLRDHLPDNMDDFKDRARERYETASDRLGRVTNVLRGKEESRIFGKVGVLLIGVGVGVGVGLLIAPASGERTRATHHRQGFGVWRQGS*
Ga0070705_1010283001	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKKQESLLNVLLGTGLYLLDTLRERLPDNMDAIKSRARDTYDTASDRLSRATDALRGEEDSQIFGKVG
Ga0070684_1016370681	3300005535	Corn Rhizosphere	MRFKKQKPLLSILLGAGLYLFDSLREHLPDNVDDIKGKVRDTYDTASARVSRASDALRGSEDSQILGKVGALVI
Ga0070696_1007920421	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPTRFRQREPLLSVLLGTGLRLLDSLRDRLSGNVDDFNVRVGNTYDNASDRVSRATAALRGEEDSQLLGKGIALLIGVGIGVG
Ga0070693_1004810041	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKKEPFLGVLLGIGLNLLDSLRERLPDNFDDVKGRVRDTYDTASRRVSRASYALRGEEDSHILGNVGALLMGVGVGVGVGLLVA
Ga0066700_107117582	3300005559	Soil	MGFRKREPLLSILLDAGLHLLDSARERLPDNMDDMRDRVRDTYGTASERVSRATGALRGEEESHIFGTIGVLLIGVGIGVG
Ga0070664_1005154651	3300005564	Corn Rhizosphere	MRFKKQKPLLSILLGAGLYLFDSLREHLPDNVDDIKGKVRDTYDTASARVSRASDALRGSEDSQILGKVGTLVIGVGIGVGIG
Ga0070762_101764622	3300005602	Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVGVGLLIAP
Ga0070763_101777162	3300005610	Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVGVGLLIAPASGEET
Ga0068852_1019409932	3300005616	Corn Rhizosphere	MRFKNKELVLGVLLGAGLNLLNSLRERLPDNLDDIKTKVMDTYGTASSRVSRASDVLRGQEDSHILGKVGALLIGV
Ga0070717_104997881	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTATDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGVLIAPANGEET
Ga0070717_116780112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRFRKREPLVSFLIDTGLNMLDSLRDRLPDDVDDIKERVRDTYGAASGRVSRAADALRGEEDSQILGKAVALAIGVGIGVGIGLLIA
Ga0075029_1010055051	3300006052	Watersheds	MKSNKRAVLGVLLSTGLYLLDNLRERMPDNIEDIKGKARETYETASDRLGRATDVLRGKENSQMLGKVGALLIGVGIGVGVGLLI
Ga0075030_1001323671	3300006162	Watersheds	MKSRSRESLLSILLDTGLHLVDSLRERLPDTVDDVKGRVRDTYDTASDRVSRATDALRGEEDSHILGKVGALLVGVG
Ga0097621_1011129703	3300006237	Miscanthus Rhizosphere	MTFKKKEPFLGVLLGIGLNLLDSLRERLPDNFDDVKGRVRDTYDTASRRVSRARYALRGEEDSHILGNVGALL
Ga0075425_1015883702	3300006854	Populus Rhizosphere	MRFRRREPLFNIVLDTGLELFDSVRERLPDNMEDIKGRVRDTYGNVSRRVGRATNALRGQEDSQIFGKAVALAMGVGIGVGIG
Ga0066793_106104461	3300009029	Prmafrost Soil	MRFKKREPLFNVLLDTGLHLLDSLRERLPDNVDDIKDRVRDTYDTASHRVSRATDALRGEEDSQILGKVGALLIGVGIGVGIGMLIAPASGED
Ga0099829_107125931	3300009038	Vadose Zone Soil	MKFKKQELLFGILLGAGLNLLNSLREHRPDNVDDIKTRVRDTYDTAYNRVSRASDALRGQEDSHILGKVGALLIGVG
Ga0099829_110230532	3300009038	Vadose Zone Soil	MRFRKREPLLDILLGAGLYLLDDLRERLPDNMDDIKGRARETFETASDRVGRATNALRGREDSQIFGRVGAVLIGVGIGVGVGLLIAPARGEEMRADIA
Ga0099829_110366201	3300009038	Vadose Zone Soil	MKFKRKELLLGVLLGAGLNLLNSLRERLPDNLDDIKARVRDTYGTASDRVSRASDVLRGEEDSHILGKVGALLVGVGIGVGVGLLIAPA
Ga0099830_111068893	3300009088	Vadose Zone Soil	MRFRKREPLLDILLGTGLYLLDNLRERLPDDIKGRARETYETASDRLGRASNALRGREDSRIFGRVGALLIGVGIGVGVGLLIA
Ga0099827_107907612	3300009090	Vadose Zone Soil	MKFKRQESLLNVLLGTGLYLFDNLRERLPDNMDSVKSRVRDTYDTASQRVSRATDALRGEEDSHVFGKLGALLIGVGIGIGVGLLIAQASGEETRADIAE
Ga0105245_101580531	3300009098	Miscanthus Rhizosphere	MTFKKKEPFLGVLLGIGLNLLDSLRERLPDNFDDVKGRVRDTYDTASRRVSRARYALRGEEDSHILGNVGALLMGVGVGVGVGLLV
Ga0099792_112256632	3300009143	Vadose Zone Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDNMEDIKGRVRDTYGTASRRVGRASNALRGQEDSQILGKAVALA
Ga0105241_105020881	3300009174	Corn Rhizosphere	MHMKVKKQELLLGLVLGTGLHLLDSLRERLPDNADEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTL
Ga0105241_121996461	3300009174	Corn Rhizosphere	MRTRRREPLLDVLLGAGLHLIDSLRDRLPDNVNDIKDRVRGTYDTASYRVGRATSALRGEEDSHIFGTVTTLAIGVGIGVGIGLLIAPST
Ga0105242_104978632	3300009176	Miscanthus Rhizosphere	MKFKQKELLLGVLLGTGLRLLNDLRDRLPDNMDDIKDKARQRYRTASDRLGRASDVLRGKEESRIFGKVGVLLIGVGVGVG
Ga0134125_115945122	3300010371	Terrestrial Soil	MRFRRRQPLLNILLDSGLQLLDSVRGHLPDDMDNMKDRVRVGYGTASQRVSRAANALRGEEESHIVGTVGALLL
Ga0134125_124946481	3300010371	Terrestrial Soil	MKFKQKELLLGVLLGTGLRLLNDLRDRLPDNMDDIKDKAKQRYRTASDRLGRASDVLRGKEESRIFGNVGVLLIGVGVGVGIGLLIAPASGDSTRADI
Ga0105239_116609321	3300010375	Corn Rhizosphere	MHMKFKKQELLLGLLLGTGLHLLDSLRERLPDNADEIKSRVKDTYDTVYKRVSRATDALRGEDDSHILGKVGTLLIGVGIGVGVGLLIAPA
Ga0105239_133312111	3300010375	Corn Rhizosphere	MKFKQKELLLGVLLGTGLRLLNDLRDRLPDNMDDIKDKAKQRYRTASDRLGRASDVLRGKEESRILGNVGVLLIGVGVGVGIGLLIAPASGDSTRADIT
Ga0134124_126864081	3300010397	Terrestrial Soil	MRFRRREPLLNVLLSTGLHLIDSLRERLPDDVDDIKDRVRDTYDTASYRVGRATSALRGEEDSHIFGTVTTLAIGVGIGVG
Ga0134122_129388251	3300010400	Terrestrial Soil	MTFKKKEPFLGVLLGIGLNLLDSLRERLPDNFDEVKGRVRDTYDTASRRVSRASYALRGEEDSHILGNVGALLMGVG
Ga0134121_110434782	3300010401	Terrestrial Soil	MKFKQKELLLGVLLGTGLRLLNDLRDRLPDNMDDIKDKARQRYRTASDRLGRASDVLRGKEESRIFGKVGVLLMAWASAWESVC*
Ga0137389_100652095	3300012096	Vadose Zone Soil	MRFKKREPLFSVLLDTGLYLLDSLRGRLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGVLIAP
Ga0137388_104411911	3300012189	Vadose Zone Soil	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGVLIAPANGEETR
Ga0137388_107956361	3300012189	Vadose Zone Soil	MKFKKQELLLGLLLGTGLRLLDSLRERLPDNVDDIKGRLRDTYDTAYNRVSRATDALRGEEDSHRFGKFGALLAGVGIGVGVGLLIAPARGEE
Ga0137362_102228923	3300012205	Vadose Zone Soil	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGVLIAPANG
Ga0137362_106483292	3300012205	Vadose Zone Soil	MKSRRQESLLNVLLGTGLYLFDNLRERLPDNMDSVKSRVRDTYDTASQRVSRATDALRGEEDSHVFGKLGALLIGVGIG
Ga0137376_104846241	3300012208	Vadose Zone Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDDMEDIKGRVRDTYGTASRRVGRATNVLRGQDDSQILGKAVAL
Ga0137377_115454491	3300012211	Vadose Zone Soil	MAAKLSLGDTRMRFKKREPLFNVLLDTGLYLLDSFRERLPDNVDDIKGRVRETYDAASERVSRATDALRGEENSQILGKVGALLIGAGIGVGIGVLIAPASGEETRS
Ga0137386_107285931	3300012351	Vadose Zone Soil	MKSRRQESLLNVLLGTGLYLFDNLRERLPDNMDSVKSRVRDTYDTASQRVSRATDALRGEEDSHVFGKLGALLIGVGIGIGFGLLIAPSSGEET
Ga0137385_115332181	3300012359	Vadose Zone Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDNMDDIKGRVRDTYGTASRRVSRATNVLRGEEDSQILGKALAMAIGVGIGV
Ga0137361_114017941	3300012362	Vadose Zone Soil	MIGKTSSGGMPMTFRRREPLLGVLLDTGLYLFDSLRERPSDSVDDIKGSVRDTYDTASRRVSGVINALRG
Ga0137358_108605533	3300012582	Vadose Zone Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDDMEDIKGRVRDTYGTASRRVGRATNALRRQEDSQTLGKVVPLAIGVGI
Ga0137416_104289662	3300012927	Vadose Zone Soil	MRFRKRKPLFSVLLDTGLHLLDSLRDRLPDNMDDIKGKVRDSYSTASDRVSRATDALRGEDESHIFGKAVALAIGVGIGIGIGVLIAPARGEETRADIA
Ga0137404_102479091	3300012929	Vadose Zone Soil	MIGKTSSGGLPMTFRRREPLLGVLLDTGLYLFDSLRERPSDRVDDIKGSVRDTYDTASRRVSRVINALRGEENSQILGKV
Ga0164301_101343021	3300012960	Soil	MRFKNKELVLGVLLGAGLNLLNSLRERLPDNLDDIKTKVMDTYGTASSRVSRASDVLRGQEDSHILGKVGALLI
Ga0164305_117729361	3300012989	Soil	MRLRRREPLLNVLLSTGLHLIDSLRERLPDNVDDIKDRARDTYDTASYRVSRATDALRGEEDSHIFGTIGVLLIGVGIGVGVGLLIAPTSGEET
Ga0157379_101076911	3300014968	Switchgrass Rhizosphere	MHMKFKKQELLLGLLLGTGLHLLDSLRERLPDNADEIKSRVKDTYDTAYKRVSRAADALRGEEDSHILGKVGTLLIGVGIGVGVGL
Ga0137409_102007101	3300015245	Vadose Zone Soil	MRFKKREPLFSVLLDTGLHLLDSLRERLPENVDDLKDRVRDTYDTASDRVSRATDALRGEEDSQILGRVGTLLIG
Ga0137403_102861253	3300015264	Vadose Zone Soil	MIGKTSSGGLPMTFRRREPLLGVLLDTGLYLFDSLRERPSDRVDDIKGSVRDTYDTASRRVSRVINALRGEENSQILGKVGALLIGV
Ga0132258_102125075	3300015371	Arabidopsis Rhizosphere	MHMKFKKQELLLGLVLGTGLHLLDSLRERLPDNANEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLIGVGIGVGVGLLIAPASGAETRAEI
Ga0132258_133526452	3300015371	Arabidopsis Rhizosphere	MRTRRREPLLDVLLGAGLHLIDSLRDRLPDNVNDIKDRVRGTYDTASYRVGRATDALRGEEESHLFGTVGALLIGVGIGVGIGLLIAPT
Ga0187802_100685433	3300017822	Freshwater Sediment	LKFKKRESLLGVLLSTGVYLLDALRERVPDNMDDIKGRARETYETASDRLGRAADALAGKEDSQIFGKVGALLIGVGIG
Ga0187802_103427501	3300017822	Freshwater Sediment	MKFKKREVLGVLLSTGLYLLDNLRERLPDNVENIKGKARETYETASDRLGRATDALRGKEDSQVLSNVGALLLGVGVGVGVGLL
Ga0187823_100369591	3300017993	Freshwater Sediment	MKFKKKELLFGVLLGAGLNLLNSLRDHLPDNLDDIKTRVRDTYGTASDRVSRASDVLRGEEDSHVLGKVGALLVGVGVGVGVGLLIAPARGDET
Ga0184586_1245712	3300019194	Soil	MKFKKREVLGVLLSTGLYLLDNLRERLPDKVENIKGKARETYETASDRLGRATDALRGKEDSQVLSNIGALLIG
Ga0137408_10188673	3300019789	Vadose Zone Soil	MRFKKREPLFSVLLDTGLHLLDSLRERLPENVDDLKDRVRDTYDTASDRVSRATDALRGEEDSQILGRVGTLLIGVGIGVGIGMLIAPAT
Ga0137408_11466841	3300019789	Vadose Zone Soil	MRFRKRKPLFSVLLDTGLHLLDSLRDRLPDNMDDIKGKVRDSYSTASDRVSRATDALRGEDQSHIFGKAVALAIGVGIGIGIGIGV
Ga0137408_11466852	3300019789	Vadose Zone Soil	MRFRKRKPLFSVLLDTGLHLLDSLRDRLPDNMDDIKGKVRDSYSTASDRVSRATDALRGEDQSHIFGKAVALAIGVGIGIGIGVLIAPARGEET
Ga0193723_10366102	3300019879	Soil	MRFRNRKPLSSILADAGLQLLDSLQDRLPDNMDDIKGKVRDTYSTASTRVSRATNALRGEEESQIFGKAIALVVGVGIGIGIGLLIAPASGEETR
Ga0193723_11486002	3300019879	Soil	MKFKQKELLLGVLVGSVLHMLGNLRERLPDNIDDITGIARETYDTASDRLGRATNVLRGREESRIFSKVGALLIGVGVGVGVG
Ga0193729_12100241	3300019887	Soil	MRFKKREPLFNVLLDTGLYLLDSFRERLPDNVDDIKDRVRDTYDTASERVSRATDALRGEEDSQILGKVGALLIGVGIGVGIGVLIAPASGEETRSEI
Ga0193728_12444491	3300019890	Soil	TGINLLDSLRERLPDNADDIKDRVRDTYATATRRVSRATDAIRGEEDSQILGKAVALLIGVGIRRGRRFADRTGQR
Ga0193733_10691411	3300020022	Soil	MKFKKKDLLLGVLLGTGLNVLNNLRDRLPDNLDDIKDRARERYETASDRLGRATNALRGKEDSRILGKVG
Ga0210399_103431222	3300020581	Soil	MRFRKREPRIGVLLSTGLYLLDNLRERLPDNMDNVKDRARQTYETASDRLGRATNALRGKEESRVFGKVGVMLLGLGVGVGVGLLIAPASGE
Ga0210401_1000316413	3300020583	Soil	MRFRKREPLIGVLLSTGLYLLDNLRERLPDNMDNVKDRARQTYETASDRLGRATNALRGKEESRVFGKVGVMLLGLGVGVGVGLLIAPASGE
Ga0210404_104974881	3300021088	Soil	MRFKKRESLLSALFGTGLYLLENLRERLPDNMDDIKGRARETYETASDRLGHAADALRGKEDSQIVGKVSALLI
Ga0210406_104980183	3300021168	Soil	MRFRKREPLFSVLLDTGLHLIDSLRDRLPYNMDDINDKVRDTYSIASDRVSRATDALRGEGESRIFGKAVALAIGVGIGIGIGVLIAPARG
Ga0210400_101629712	3300021170	Soil	MRFKKRESLLSALFGTGLYLLENLRERLPDNMDDIKGRARETYETASDRLGHAADALRGKEDSQIVGKVSALLIGVGIGLGVGLLIAPASGDQTRADIA
Ga0210400_113727401	3300021170	Soil	MKFKKRESLLGILLSTSLYLLDNLRERLPDSMDYIKGRARETYETASERLGRATNALASKEDSQVFGKVGVLLIGVGIGVGVGLLIAPASGE
Ga0210405_100641151	3300021171	Soil	MRFRKREPLIGVLLSTGLYLLDNLRERLPDNMDDVKDRARQTYETASDRLGRATNALRGKEESRVFGKVGVMLLGLGVGVGVGLLIAPASGE
Ga0210405_105184641	3300021171	Soil	MRFRKREPLIGVLLSTGLYLLDNLRERLPDNMDDVKDRARQTYETASDRLGRATNALRGKEESRVFGKVG
Ga0210393_103981282	3300021401	Soil	MKSKKRAVLGVLLSTGLYLLDNLREQMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVGVGLL
Ga0210397_104292721	3300021403	Soil	MRFKKRESLLSALFGTGLYLLENLRDRLPDNVDDIKGRARETYETASDRLGHAADALRGKEDSQIVGKVSALLIGVGIGLG
Ga0210397_114656361	3300021403	Soil	MRFRKREPLFSVLLDTGLHLIDSLRDRLPYNMDDINDKVRDTYSIASDRISRATDALRGEGESRIFGKAVALAIGVGIGIGIGVLIAP
Ga0210389_109115962	3300021404	Soil	MKFKKREVLGVLLSTGLYLLDNLRERLPDKVENIKGKARETYETASDRLGRATDALRGKEDSQVLSNVGA
Ga0210384_100507103	3300021432	Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDNMDDIKGRVRDTYGTASRRVGRATNALRGQEDSQILGKAVALAIGVGIGVGIGLLIAPASGE
Ga0210384_106983362	3300021432	Soil	MRFKKRELLLSVLVGTGLHLLNSLRGRLPDNMDDIKGKVRDTYDTASDRVSRATDALRGKEDSQILGKVGALLIGVGIGVGIGVLIAPAS
Ga0210390_103588372	3300021474	Soil	MKFKKRESLLGVLLSTGLYLLDNLRERVPGNMDDIKGRANETYQTASEPLSRATVALAGREDSQTFGRVGALLIGVGIGVGVGLLIAPAMRAD
Ga0210410_101601851	3300021479	Soil	MRFRRREPLFSILLDTGLELLDSVRERLPDNMDDIKGRVRDTYGTASRRVGRATNALRGQEDSQILGKAVALAIGVGIGVGIGLLIA
Ga0210410_105583602	3300021479	Soil	MRFRKREPRIGVLLSTGLYLLDNLRERLPDNMDDVKDRARQTYETASDRLGRATNALRGKEESRVFGKVGVMLLGLGVGVGVGLLIAPASGE
Ga0210409_113823852	3300021559	Soil	MRFRKREPLFSVLLDTGLRLLDSLRDRLPDNMDDIKGKVRDTYGIASDRVSRATDALRGEDESHIFGKAVALAIGVGIGIGIGVLI
Ga0210409_114990231	3300021559	Soil	MRFRKREPLLGVLLSTGLYLLDNLRESLPDNMDDLRNRARQTYETAYDRLGRASTALRGKEESRVFGKVGVLLIGVGVGVGVGLLIAPASG
Ga0212123_106591911	3300022557	Iron-Sulfur Acid Spring	MRFRKREPLFSVLLDTSLHLLDSLRDRLPDNMDDIKGKVRDTYSTASDRVSRATDALRGEEESQIFGKAVALAIGVGIGIGI
Ga0137417_10393081	3300024330	Vadose Zone Soil	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGVLI
Ga0137417_13323023	3300024330	Vadose Zone Soil	MRFKKREPLFSVLLDTGLYLLDSLRERLPDNVDDIKDRVRDTYDTASDRVSRAADALRGEEDSQLLGKVGALLIGVGIGVGIGV
Ga0207686_108894461	3300025934	Miscanthus Rhizosphere	MRFKNKELVLGVLLGAGLNLLNSLRERLPDNLDDIKTKVMDTYGTASSRVSRASDVLRGQEDSHILGKVGALLIGVGVGVGVGLLIAPA
Ga0207667_103517532	3300025949	Corn Rhizosphere	MKFKKQELLLGLVLGTGLHLLDSLRERLPDNANEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLIGVGIGVGVGM
Ga0207678_113063051	3300026067	Corn Rhizosphere	MKFKKQELLLGLLLGTGLHLLDSLRERLPDNVDEIKSRVKDTYDTAYKRVSRATDALRGGEDSHIRGKVGTLLIGVGIGVGVGLLIAPASGAE
Ga0257180_10634811	3300026354	Soil	MKFKKQEPLLSVLLGTGLYLIDTLRERLPDNMDDIKGRARETYETASDRLGRATNALRGKEDSQIFDKVGALLIGVGIGVGVGLLIASASGEEMRADI
Ga0257181_10889271	3300026499	Soil	MKFKKQELLLGLLLGTGLRLLDSLRERLPDNVDDIKGRLRDTYDTAYNRVSRATDALRGAEDSHRFGKFVALLAGVGIGVGVGLLIAPARGEETRA
Ga0208604_10115611	3300027090	Forest Soil	MKFKKRAVLGALLSTGLYLLDNLRERMPDNIDDIKAGAREKYETASDRLGRAADALRGKEDSHMLGKVGALLLGVGIG
Ga0208525_10325691	3300027288	Soil	LRRREPLFSVLLGTGLHLLDSLRGRLPEAMDDVKDRVGDTYETASDRVSRASAALRGEEESQLLGKGIALLIGVVVLVRRRGEEERA
Ga0209625_11286112	3300027635	Forest Soil	LSTGLYLLDNLRERLPDNMDDVKDRARQTYETASDRLGRATNALRGKEESRVFGKVGVMLLGLGVGVGVGLLIVPSSGE
Ga0209217_11737391	3300027651	Forest Soil	MKFKKQELLLDVLLGAGLDLLNSLRERLPDNVDEIKDRARETYETASDRLGRATNALRGKEDSQIFGKVGALLIGAGIGVGVGLL
Ga0209217_11975531	3300027651	Forest Soil	MKFKKQESLLNVLLGTGLYLIDNLRACLPDNMDSVKSRVRETYDAASDRVSRATDVLRGEEDTQIFGKIGALLIGVGIGVGVGMLIAPASGEETR
Ga0209011_11028972	3300027678	Forest Soil	MRFRKREPLLGVLLSTGLHLMDSLRERLPDDVDDIKDRVRDTYDTASHRVSRATNALRGEEDSHILGTVGALLIG
Ga0209011_11482154	3300027678	Forest Soil	MRFKKKELLLSLMVGTGLHLLNHLRERLPDNVDDIKDRFRDTYDTASDRVSRATNALRGEEDSHIFGKVGVLLIGVGIGVGI
Ga0209328_100998503	3300027727	Forest Soil	MKIKKRDLFNLLLGTGLYLVDNLRERLPDNMDEIKGRARETYETASDRLGRATNALRGKKDSQIFGRIGALLVGVGIGVGVGLLIAPASGEET
Ga0209180_104743081	3300027846	Vadose Zone Soil	MKFKRKELLLGVLLGAGLNLLNSLRERLPDNLDDIKARVRDTYGTASDRVSRASDVLRGEEDSHILGKVGALLVGVGIGVGIG
Ga0209275_101092832	3300027884	Soil	MKFKKRESILGVLLSTGLYLFDTLRGRMPDNVDDIKGRAKETYETASERLGRATDALAGKEDSQMLGKVGALLIGVGIGVG
Ga0209275_104154502	3300027884	Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVG
Ga0209380_101552272	3300027889	Soil	MRFKKRESLLSALFGTGLYLLENLRERLPDNMDDMKGRAKETYETASDRLGNAADALRGKQDSDIFGKVSAL
Ga0209380_102575711	3300027889	Soil	MKFKKRAALGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVGVGLLIAPASGE
Ga0209380_102591092	3300027889	Soil	MKFKKRAVLGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGREDSQMLGKVGALLIGVGIGVGVGLLIAPASGE
Ga0209380_102798331	3300027889	Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIDDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVG
Ga0209583_105460481	3300027910	Watersheds	MKFKKQEPLLSVLLGTGLYLVDALRERLPDNMDDVKGRARETYETASDRLGRATNALRGKEDSQIFGKVGA
Ga0209698_101435864	3300027911	Watersheds	MKSRSRESLLSILLDTGLHLVDSLRERLPDTVDDVKGRVRDTYDTASDRVSRATDALRGEEDSHILGKVGAL
Ga0209526_104658113	3300028047	Forest Soil	MRFKKRESLLSALLGTGLYLLENLRDRMPDNMGDMKGRARETYETASERLSHAADALRGKEDSHIFGNVSALLIGVGIGLGVGLL
Ga0209526_104775521	3300028047	Forest Soil	MKFKKQESLLNVLLGTGLYVLDNLRERLPDNMDSIKSRARDTYDTASDRISRASNVLRGEEDPQIFGKIGVLLIGVGIGVGVGMLIAPASGEETRAD
Ga0209526_106944571	3300028047	Forest Soil	MRFKKRELLLSVLVGTGLHLLNSLRGRLPDNMDDIKGKVRDTYDTASDRVSRATDALRGKEDSQILGKVGALLIGVGIGVGIGVLIAPASGLSQSNNY
Ga0316363_104373241	3300030659	Peatlands Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIDEIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALLIGVGIGVGV
Ga0265771_10144491	3300031010	Soil	MKSKKRAVLGVLLSTGLYLLDNLRERMPDNIEDIKGKARETYETASDRLGRATDVLRGKEDSQMLGKVGALL
Ga0170822_150796941	3300031122	Forest Soil	MKFKKRAVLGALLSTGLYLLDNLRERMPDNIDDIKAGAREKYETASDRLGRAADALRGKEDSHMLGKV
Ga0170824_1185570051	3300031231	Forest Soil	MRLRRREPLLNVLLSTGLHLFDSLRDRLPDDVDDIKGRVRDTYDTASHRIGRATNALRGEEESHVLGTVGAVV
Ga0310686_1189316853	3300031708	Soil	MKFKKRELFGVLLSTGLYLFDSLRERLPDNVGNIKGGARERYETASEHLGRATDALRVKEHSQILGKVGAFLIGAAIGAGVGLLIAPASGEE
Ga0310813_119043311	3300031716	Soil	MKFKNKELLLGVLLGAGLNLLNSLRKRLPDNLDGIKTKVRDTYGIASSRVSRASDALRGQENSHILGQVGALLIGV
Ga0307469_101485791	3300031720	Hardwood Forest Soil	MNMRFRKREPLLTVLLSTGLHLIDSLRERLPDNVDDIKGRVRDTYDIASHRVGRATDALRGEEESHMFGKVGALVIGVGIGV
Ga0307469_102700593	3300031720	Hardwood Forest Soil	MPTRFRQREPLLSVLLGTGLRLLDSLRDRLSGNVDDFKVRVGDTYDNASDRVSRATAALRGEEDSQLLGKGIALLIGVGIGVGIGVL
Ga0307478_118085671	3300031823	Hardwood Forest Soil	MKFKKRESLLGILLSTGLSLLDALRERVPDNMDDIKGRARETYETASDRLGRAAGALAGKEDSQMLGKVGALLIGVGIGVG
Ga0307479_108200671	3300031962	Hardwood Forest Soil	MRFRKREPLFSVLLETGLHLVDSLRDRLPDNMNHIKGKVRDTYSTASDRVSRATEALRGEKESQIFGKAVALAIGVGIGIG
Ga0316053_1030651	3300032120	Soil	MKFKKREVLGVLLSTGLYLLDNLRERLPDKVENIKGKARETYETASDRLGRATDALRGKEDSQVLSNIGALLIGVGV
Ga0307471_1018533431	3300032180	Hardwood Forest Soil	MRFKRRESLLNALFGTGLYLLENLRERLPDNMDDIKGRARETFETASDRLGHAADALRGKEDSQIVGKVSALLI
Ga0307471_1036978511	3300032180	Hardwood Forest Soil	MNFKKQQPLLNVLLGTGLYLLESMRERLPDNLDDIKGRVRDTYDTASDRVGRATAALRGEEDSHILGKAAALLVGVGI
Ga0310810_102971182	3300033412	Soil	MKFKKQELLLGLVLGTGLHLLDSLRERLPDNADEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLIGVGIGVGVGL
Ga0310810_103011311	3300033412	Soil	MKVKKQELLLGLVLGTGLHLLDSLRERLPDNADEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLI
Ga0310811_104499103	3300033475	Soil	MHMKFKKQELLLGLLLGTGLHLLDSLRERLPDNVDEIKSRVKDTYDTAYKRVSRATDALRGEEDSHILGKVGTLLI
Ga0310811_112046501	3300033475	Soil	MRFKNKELLLGVLLGAGLNLLNSLRELLPDNLDDIKTKVRDTYGTASSRVSRASDVLRGQEDSHILGRVGALLIGVGVGVGVGLLIAPASGKETRTGI
Ga0326723_0480516_278_568	3300034090	Peat Soil	MRFKKREPLFSVLLDTGLHLLDSLLERVPDNVDDIKDRVRDTYDTATDRVSRATDALRGKEDSQILGKVAALLIGVGIGVGVGLLIAPASGEGTRDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences