Metagenome Family F055735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055735
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	48 residues
Representative Sequence	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENE
Number of Associated Samples	82
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	38.41 %
% of genes near scaffold ends (potentially truncated)	30.43 %
% of genes from short scaffolds (< 2000 bps)	78.26 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (39.855 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (39.130 % of family members)
Environment Ontology (ENVO)	Unclassified (87.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.101 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1GOS2262_10099025 2JGI25127J35165_10452473 3JGI25127J35165_10642713 4JGI25128J35275_100048418 5Ga0066371_1000080010 6Ga0075462_100037247 7Ga0100229_10915633 8Ga0098038_100243414 9Ga0098038_10282297 10Ga0098038_11483492 11Ga0098038_11501453 12Ga0098038_11835831 13Ga0098038_12711293 14Ga0098037_11681822 15Ga0098042_10604513 16Ga0070746_103741141 17Ga0098036_11368121 18Ga0098036_12421902 19Ga0075468_101465981 20Ga0110931_10997501 21Ga0110931_11264261 22Ga0114932_100383982 23Ga0114932_103118692 24Ga0115011_100559846 25Ga0114933_105955663 26Ga0115012_113472032 27Ga0105189_10048046 28Ga0114934_101225284 29Ga0160422_100251513 30Ga0160423_100652607 31Ga0163179_106975181 32Ga0181369_10919823 33Ga0181404_10328183 34Ga0181404_11212792 35Ga0181396_10304431 36Ga0181396_10590135 37Ga0181417_10461411 38Ga0181417_11501743 39Ga0181415_10412721 40Ga0181415_10570951 41Ga0181428_11019581 42Ga0181428_11438293 43Ga0181428_11666861 44Ga0181402_10601202 45Ga0181393_10689572 46Ga0181405_10701712 47Ga0181411_10689534 48Ga0181411_11224713 49Ga0181382_11430874 50Ga0181420_11690573 51Ga0181413_11332952 52Ga0181413_11839372 53Ga0187220_11497814 54Ga0187221_12352201 55Ga0181386_12023312 56Ga0181379_12814651 57Ga0181424_100954674 58Ga0211707_10123884 59Ga0211648_11039733 60Ga0211474_10140262 61Ga0211703_100299073 62Ga0211477_102767683 63Ga0211647_101243411 64Ga0211476_101986462 65Ga0211636_101072102 66Ga0211659_100731334 67Ga0211668_100008922 68Ga0211472_103581451 69Ga0211699_103165832 70Ga0211557_101253242 71Ga0211702_100809333 72Ga0211620_100001051 73Ga0211521_101287503 74Ga0211708_100364654 75Ga0211708_100517443 76Ga0211708_100882991 77Ga0211708_101363772 78Ga0211708_101510691 79Ga0211708_101638564 80Ga0211708_102891591 81Ga0211558_100843294 82Ga0211518_104970322 83Ga0211641_105994411 84Ga0211473_100200376 85Ga0211475_102215525 86Ga0211577_101438455 87Ga0211577_102951244 88Ga0211614_100141116 89Ga0224902_1028311 90Ga0224906_10023955 91Ga0224906_10194403 92Ga0208157_10291153 93Ga0208157_10814352 94Ga0208157_10814762 95Ga0208157_11121322 96Ga0208159_10245596 97Ga0208159_10433743 98Ga0208158_11520583 99Ga0209348_100022710 100Ga0209348_10681053 101Ga0209348_10765765 102Ga0209348_10849274 103Ga0208919_10722951 104Ga0208919_10782631 105Ga0208919_11996462 106Ga0209232_100153618 107Ga0209232_10095995 108Ga0209645_10481835 109Ga0208749_10047925 110Ga0208815_10019765 111Ga0209503_100642941 112Ga0209503_101409751 113Ga0209503_102856011 114Ga0209503_105230591 115Ga0209404_111286991 116Ga0183683_10041286 117Ga0183683_10074095 118Ga0183683_10305163 119Ga0183683_10337173 120Ga0183683_10348793 121Ga0183748_100094928 122Ga0183748_100212317 123Ga0183748_100458814 124Ga0183748_10079266 125Ga0183748_10159203 126Ga0183748_10179616 127Ga0183748_10254394 128Ga0183748_10319626 129Ga0183748_10330534 130Ga0183748_10390264 131Ga0183748_10658512 132Ga0183748_10774122 133Ga0183748_11105932 134Ga0183755_10450263 135Ga0183757_10268574 136Ga0183826_10056415 137Ga0183826_10252902 138Ga0183826_10442671
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1GOS2262_10099025 2JGI25127J35165_10452473 3JGI25128J35275_100048418 4Ga0098038_11483492 5Ga0070746_103741141 6Ga0160422_100251513 7Ga0181369_10919823 8Ga0181413_11332952 9Ga0211648_11039733 10Ga0211647_101243411 11Ga0211636_101072102 12Ga0209503_100642941 13Ga0183683_10074095 14Ga0183748_10159203 15Ga0183748_10658512 16Ga0183826_10442671
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48 1Ga0211518_104970322 2GOS2262_10099025 3Ga0098038_11483492 4Ga0098037_11681822 5Ga0098036_11368121 6Ga0114932_103118692 7Ga0160422_100251513 8Ga0181417_10461411 9Ga0211648_11039733 10Ga0211647_101243411 11Ga0211708_100364654 12Ga0211708_101363772 13Ga0211577_101438455 14Ga0211614_100141116 15Ga0209348_10681053 16Ga0209232_10095995 17Ga0209503_100642941 18Ga0183683_10041286 19Ga0183683_10074095 20Ga0183683_10305163 21Ga0183748_10159203 22Ga0183748_10658512 23Ga0183757_10268574 24Ga0183826_10252902 25Ga0183826_10442671
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.95% β-sheet: 0.00% Coil/Unstructured: 46.05%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.29.16.1: IVS-encoded protein-like	d2rlda1	2rld	0.89615
a.29.16.1: IVS-encoded protein-like	d2gsca1	2gsc	0.87945
a.30.3.1: Nonstructural protein ns2, Nep, M1-binding domain	d1pd3a_	1pd3	0.85509
a.2.17.1: VPS23 C-terminal domain	d2f6ma2	2f6m	0.84381
a.25.2.0: automated matches	d1wvta_	1wvt	0.84122

Showing 1 to 5 of 5 entries

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00436	SSB	17.39
PF12728	HTH_17	7.25
PF04098	Rad52_Rad22	2.90
PF12684	DUF3799	2.90
PF13550	Phage-tail_3	1.45
PF00476	DNA_pol_A	1.45
PF00664	ABC_membrane	0.72
PF04883	HK97-gp10_like	0.72
PF01612	DNA_pol_A_exo1	0.72
PF00145	DNA_methylase	0.72

Showing 1 to 10 of 14 entries

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COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	17.39
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	17.39
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	1.45
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.04 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	12.32 %
Unclassified	root	N/A	36.96 %
Viruses	superkingdom	All Organisms → Viruses	50.72 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.59 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	39.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.72 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	39.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %
Unclassified	root	N/A	36.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Unclassified	root	N/A	36.96 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.72 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	39.86 %

Name	Rank	Taxonomy	Distribution
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.72 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	39.86 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.70 %
Unclassified	root	N/A	36.96 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.72 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.17 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.17 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.72 %
Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	8.70 %
Unclassified	root	N/A	36.96 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.72 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.17 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	8.70 %
Unclassified	root	N/A	36.96 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.72 %
uncultured Mediterranean phage MEDS1 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	2.17 %

Name	Rank	Taxonomy	Distribution
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.72 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.17 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Pelagibacteraceae bacterium BACL5 MAG-121015-bin10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium BACL5 MAG-121015-bin10	0.72 %
Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	8.70 %
Unclassified	root	N/A	36.96 %
uncultured Mediterranean phage MEDS1 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	2.17 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001942\|GOS2262_1009902	Not Available	1730	Open in IMG/M
3300002482\|JGI25127J35165_1045247	Not Available	968	Open in IMG/M
3300002482\|JGI25127J35165_1064271	Not Available	773	Open in IMG/M
3300002488\|JGI25128J35275_1000484	Not Available	12375	Open in IMG/M
3300006024\|Ga0066371_10000800	Not Available	7323	Open in IMG/M
3300006027\|Ga0075462_10003724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4935	Open in IMG/M
3300006481\|Ga0100229_1091563	Not Available	747	Open in IMG/M
3300006735\|Ga0098038_1002434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	7937	Open in IMG/M
3300006735\|Ga0098038_1028229	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2102	Open in IMG/M
3300006735\|Ga0098038_1148349	All Organisms → Viruses	783	Open in IMG/M

Showing 1 to 10 of 138 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.17%
Oceanic	Environmental → Aquatic → Marine → Oceanic	35.51%
Strait	Environmental → Aquatic → Marine → Strait	20.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	39.13%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.90%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	39.13%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.33%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	20.29%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.17%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.17%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	39.13%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	31.16%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.72%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.45%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	20.29%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.72%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.72%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001942	Marine microbial communities from Polynesia - GS047	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006481	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0025m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M

Showing 1 to 10 of 82 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2262_10099025	3300001942	Marine	MTDNKDLIENYQHQLAELEKKFWFDNLDMKEYCVRYDAINKRISELENETRGTSFWE
JGI25127J35165_10452473	3300002482	Marine	MKNKDLIKNYYNQLAELQKKFWFERLDLKEYCVRYDAINKRIAEL
JGI25127J35165_10642713	3300002482	Marine	MEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAEL
JGI25128J35275_100048418	3300002488	Marine	MEQTNKDLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE*
Ga0066371_1000080010	3300006024	Marine	MEQINKDLIKNYYQQLAALQKKFWFERLDLKEYCVRYDAINKRIAELENERL*
Ga0075462_100037247	3300006027	Aqueous	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE*
Ga0100229_10915633	3300006481	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAINKRIAELENE*
Ga0098038_100243414	3300006735	Marine	MEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE*
Ga0098038_10282297	3300006735	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENG*
Ga0098038_11483492	3300006735	Marine	VNNKDLIKNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRISELKKN*
Ga0098038_11501453	3300006735	Marine	VNNKDLIDNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRISELEKD*
Ga0098038_11835831	3300006735	Marine	NYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE*
Ga0098038_12711293	3300006735	Marine	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELE
Ga0098037_11681822	3300006737	Marine	MDNRDLIENYLQQLAELQNQFWFNNLEMKEYCVRYDAINKRISELEKD*
Ga0098042_10604513	3300006749	Marine	MDNRDLIENYLQQLAELQNQFWFNNLEMKEYCVRYDAINKRISELKKD*
Ga0070746_103741141	3300006919	Aqueous	MNNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRY
Ga0098036_11368121	3300006929	Marine	MEQTNKELIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE*
Ga0098036_12421902	3300006929	Marine	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG*
Ga0075468_101465981	3300007229	Aqueous	IMEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE*
Ga0110931_10997501	3300007963	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIA
Ga0110931_11264261	3300007963	Marine	MEQTNKELIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKR
Ga0114932_100383982	3300009481	Deep Subsurface	MDKTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENE*
Ga0114932_103118692	3300009481	Deep Subsurface	MKNKDLIKNYYDQLAELQKQYWFENMEIKEYCVKYDAINKRIWELQNEKG*
Ga0115011_100559846	3300009593	Marine	MKNKDLIKNYYDQLAELQRQYWFENMETKEYCVRYDAINKRIAELENE*
Ga0114933_105955663	3300009703	Deep Subsurface	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENE*
Ga0115012_113472032	3300009790	Marine	MKNKDLIKNYYQQLAALQKKFWFERLDLKEYCVRYDAINKRIAELENERL*
Ga0105189_10048046	3300009794	Marine Oceanic	LPNMNYMKNKDLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE*
Ga0114934_101225284	3300011013	Deep Subsurface	MDKTNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG*
Ga0160422_100251513	3300012919	Seawater	LNKKPIKNYQHQLAELQKQYFFENMDKKEYCVRYDAINKRLSELENEKR*
Ga0160423_100652607	3300012920	Surface Seawater	MKNKDLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE*
Ga0163179_106975181	3300012953	Seawater	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELEN
Ga0181369_10919823	3300017708	Marine	RRIRTSHKIMEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0181404_10328183	3300017717	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENR
Ga0181404_11212792	3300017717	Seawater	MDKTNKDLIKNYYDQLAELQKQYWFENMEIKEYCVKYDAINKRIWELQNEKG
Ga0181396_10304431	3300017729	Seawater	MDKTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELEN
Ga0181396_10590135	3300017729	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELEN
Ga0181417_10461411	3300017730	Seawater	MDKTNKDLIKNYYDQLAELQKKFWFERLDMKEYCIIYDAINKRIEELENG
Ga0181417_11501743	3300017730	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYGVRYDAINKRI
Ga0181415_10412721	3300017732	Seawater	MKNKDLIKNYYDQLAELQKQFCFERLDLKEYCVRYDAINKRIEELENG
Ga0181415_10570951	3300017732	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIE
Ga0181428_11019581	3300017738	Seawater	MRNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENG
Ga0181428_11438293	3300017738	Seawater	MKNKDLIKNYYDQLAELQKQFWFERLDMKEYCVRYDAINKRIEELENG
Ga0181428_11666861	3300017738	Seawater	MKNKDLIKNYYDQLAELQKQFWFERLDLKEECVRYDAINKRSEELEKG
Ga0181402_10601202	3300017743	Seawater	MDKTNKDLIKYYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG
Ga0181393_10689572	3300017748	Seawater	MNNKDLIQNYLQQLAELQSQFWFNNLDTKEYCVRYDAINKRINELEKD
Ga0181405_10701712	3300017750	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELKNG
Ga0181411_10689534	3300017755	Seawater	MKNKDLIKNYYDQLAELQKKFCFERLDLKEYCVRYDAINKRIEELENG
Ga0181411_11224713	3300017755	Seawater	MDKTNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKR
Ga0181382_11430874	3300017756	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIKELENG
Ga0181420_11690573	3300017757	Seawater	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIKELENG
Ga0181413_11332952	3300017765	Seawater	MDKTNKDLIKNYYDQLAELQKKLWFERLDMKEYCIIYDAINKRIEELENG
Ga0181413_11839372	3300017765	Seawater	MDKTNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELKNG
Ga0187220_11497814	3300017768	Seawater	MDQMKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG
Ga0187221_12352201	3300017769	Seawater	MENKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIWELQNEKG
Ga0181386_12023312	3300017773	Seawater	MDKTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEE
Ga0181379_12814651	3300017783	Seawater	MDKTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRY
Ga0181424_100954674	3300017786	Seawater	MKNKDLIKNYYDQLAELQNQFWFNNLDMKEYCVRYDAINKRIEELENG
Ga0211707_10123884	3300020246	Marine	MKNKDLIKNYYDQLAELQKQYWFENMETKEYCVRYDAINKRIQELENE
Ga0211648_11039733	3300020267	Marine	VNYKDLIQNYQYQLAELEKQYLFENMDMKEYCVRYDAINKRISELENEA
Ga0211474_10140262	3300020296	Marine	MDKTNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG
Ga0211703_100299073	3300020367	Marine	MKNKDLIKNYYDQLAELQKQYWFENMKIKEYCVRYDAINKRIQELENE
Ga0211477_102767683	3300020374	Marine	MKNKDLIKNYYDQLAELQKQYWFENMEIKEYCVKYDAINKRIWELQNEKG
Ga0211647_101243411	3300020377	Marine	MNNIKLIENYYHQLAKLEKQYFFENMDMKEYCVRYDAIKKRIS
Ga0211476_101986462	3300020381	Marine	MDKTNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENE
Ga0211636_101072102	3300020400	Marine	MDSKDLIENYQHQLAELEKQYFFENMDMKEYCVRYD
Ga0211659_100731334	3300020404	Marine	MEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0211668_100008922	3300020406	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAINKRILELKNE
Ga0211472_103581451	3300020409	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAINKRIQELENE
Ga0211699_103165832	3300020410	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIQELENE
Ga0211557_101253242	3300020418	Marine	MLEMKNKDLIKNYYDQLAELQKKFWFERLDMKEYCVRYNAINKRIQELENE
Ga0211702_100809333	3300020422	Marine	VEEKIIILEMKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIQELENEKR
Ga0211620_100001051	3300020424	Marine	LFMKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0211521_101287503	3300020428	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENE
Ga0211708_100364654	3300020436	Marine	MKNKDLIKNYYDQLAELQKQYWFENMETKEYCVRYDAIKKRIQELENE
Ga0211708_100517443	3300020436	Marine	MKNKDLIKNYYDQLAELQKKFWFEGMETKEYCVRYDAIKKRIAELENE
Ga0211708_100882991	3300020436	Marine	MEQNNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELE
Ga0211708_101363772	3300020436	Marine	MEQTNKDLIKNYYDQLAELQRQYWFENMKTKEYCVRYDAINKRIAELENE
Ga0211708_101510691	3300020436	Marine	MKNKDLIKNYYNQLAELQKKFWFERLDLKEYCVRY
Ga0211708_101638564	3300020436	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAE
Ga0211708_102891591	3300020436	Marine	KDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0211558_100843294	3300020439	Marine	VEEKIIILEMKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAINKRIAELENE
Ga0211518_104970322	3300020440	Marine	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENE
Ga0211641_105994411	3300020450	Marine	MDSKDLIENYQHQLAELERQYFFENMDMKEYCVRYDAINKRI
Ga0211473_100200376	3300020451	Marine	MDKTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENG
Ga0211475_102215525	3300020468	Marine	MKSKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEEL
Ga0211577_101438455	3300020469	Marine	MKNKDLIKNYYDQLAELQNQFWFNNLDMKEYCVRYDAINKRLSELKNG
Ga0211577_102951244	3300020469	Marine	MKNKDLIKNYYDQLAELQKQFWFERLDLKEYCVRYDAINKRIEELENG
Ga0211614_100141116	3300020471	Marine	MKNKDLIKNYYDQLAELQRQFWFERLDKKEYCIRYDAINKRIAELEDEEK
Ga0224902_1028311	3300022066	Seawater	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENG
Ga0224906_10023955	3300022074	Seawater	MEQTNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIEELENG
Ga0224906_10194403	3300022074	Seawater	MKNKDLIKNYYDQLAELQKQFWFERLNLKEYCVRYDAINKRIEELENG
Ga0208157_10291153	3300025086	Marine	MDNRDLIENYLQQLAELQNQFWFNNLEMKEYCVRYDAINKRISELKKD
Ga0208157_10814352	3300025086	Marine	VNNKDLIKNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRISELKKN
Ga0208157_10814762	3300025086	Marine	MNNKDLIKNYLQQLAELQNQFWFNNLDIKEYCVRYDAINKRIYELEKN
Ga0208157_11121322	3300025086	Marine	VNNKDLIDNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRISELEKD
Ga0208159_10245596	3300025101	Marine	MKNKDLIKNYYDQLAELQRQYWFENMETKEYCVRYDAINKRIAELENE
Ga0208159_10433743	3300025101	Marine	MDNRDLIENYLQQLAELQNQFWFNNLEMKEYCVRYDAINKRISELEKD
Ga0208158_11520583	3300025110	Marine	NKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0209348_100022710	3300025127	Marine	MKNKDLIKNYYNQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0209348_10681053	3300025127	Marine	MKNRKLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE
Ga0209348_10765765	3300025127	Marine	MKNKKLIKIYYDQLAELQKQYWFENMETKEYCVRYDAIKKRIQELENE
Ga0209348_10849274	3300025127	Marine	MENKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAINKRIQ
Ga0208919_10722951	3300025128	Marine	MEQTNKELIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0208919_10782631	3300025128	Marine	MKNKDLIKNYYDQLAELQKQYWFEYMETKEYCVRYDAIKKRIAELENE
Ga0208919_11996462	3300025128	Marine	MEQTNKDLIKNYYDQLAELQRQYWFENLEIKEYCVRYDAINKRILELENE
Ga0209232_100153618	3300025132	Marine	MEQTNKDLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE
Ga0209232_10095995	3300025132	Marine	MEQTNKDLIKNYYDQLGELQNQFWFNNLDMKEYCVRYDAINKRIAELENE
Ga0209645_10481835	3300025151	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0208749_10047925	3300026077	Marine	MEQINKDLIKNYYQQLAALQKKFWFERLDLKEYCVRYDAINKRIAELENERL
Ga0208815_10019765	3300026134	Marine Oceanic	MKNKDLIKNYYDQLAELQRQYWFEYMETKEYCVRYDAIKKRIAELENE
Ga0209503_100642941	3300027859	Marine	MKNKDLIKNYYHQLAELQNQFWFNNLNKKEYCVRYDAINKRINELENETRRKTFWGKI
Ga0209503_101409751	3300027859	Marine	VNNKDLIQNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRI
Ga0209503_102856011	3300027859	Marine	NNKDLIQNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRISELEKN
Ga0209503_105230591	3300027859	Marine	MNNKDLIQNYLQQLAELQNQFWFNNLDMKEYCVRYDAINKRI
Ga0209404_111286991	3300027906	Marine	NQTMEQINKDLIKNYYQQLAALQKKFWFERLDLKEYCVRYDAINKRIAELENERL
Ga0183683_10041286	3300029309	Marine	MKNKDLIKNYQHQLAELQKQFWFNNLDMKEYCVRYDAINKRLSELENEKK
Ga0183683_10074095	3300029309	Marine	MDNKDLIENYQHQLAELERQYFFENMNMKEYCVRYDAINKRIIELKNEKNGYXXXXIQGG
Ga0183683_10305163	3300029309	Marine	MDTKKLIENYQHQLAELQNQFWFNNLDMKEYCVRYDAINKRINELENEARRTSI
Ga0183683_10337173	3300029309	Marine	MKNKDLIENYQHQLAELQNQFWFNNLDMKEYCVRYDAIKKRINELENEKRRTSIWQK
Ga0183683_10348793	3300029309	Marine	MNNKDLIENYQHQLAELQKKFWFDNLDMKEYCVRYDAINKRINELENETR
Ga0183748_100094928	3300029319	Marine	MKNKYLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0183748_100212317	3300029319	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRITELENE
Ga0183748_100458814	3300029319	Marine	VKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0183748_10079266	3300029319	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAIKKRIQELENE
Ga0183748_10159203	3300029319	Marine	MGNEDLIKNYYQQLATLQERFWFGQLDKKEYCIRYDAINKRIAELENE
Ga0183748_10179616	3300029319	Marine	MKNKDLIKNYYDQLAELQKQYWFENMETKEYCVRYDAINKRIAELENE
Ga0183748_10254394	3300029319	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRILELENE
Ga0183748_10319626	3300029319	Marine	MKNKDLIKNYYEQLAELQKQYWFEGMETKEYCVRYDAINKRILELENE
Ga0183748_10330534	3300029319	Marine	MENKDLIKNYYDQLAELQKQYWFENMETKEYCVRYDAIKKRIAELENE
Ga0183748_10390264	3300029319	Marine	MKNKDLIKNYYDQLAELQKQYWFENMETKEYCVRYDAIKKRIQELQNE
Ga0183748_10658512	3300029319	Marine	MGHFAPFLFMKNKDLIKNYYDQLAELQKKFWFERLDPKVYCVKYDAIKKRIAELENE
Ga0183748_10774122	3300029319	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMQTKEYCVRYDAINKRIAELENEKT
Ga0183748_11105932	3300029319	Marine	MKNKDLIKNYYDQLAELQKQYWFEGMETKEYCVRYDAIKKRIAELENE
Ga0183755_10450263	3300029448	Marine	MKNKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYD
Ga0183757_10268574	3300029787	Marine	VNNKDLIQNYLQQLAELQNQFWFNNLDVKEYCVRYDAINKRIYELEKD
Ga0183826_10056415	3300029792	Marine	MENKDLIKNYYDQLAELQKKFWFERLDLKEYCVRYDAINKRIAELENE
Ga0183826_10252902	3300029792	Marine	MKNKDLIKNYYDQLAELQKKFWFKGLKKKEYCVRYDAIKKRIQELENE
Ga0183826_10442671	3300029792	Marine	MQQKWNLLMNNKDLIKNYYDQLAELQRQYWFEYMDTKEYCVRYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055735

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences