Metagenome / Metatranscriptome Family F055709

Basic Information
Family ID	F055709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	38 residues
Representative Sequence	DDTAAEILMKLQRHGAEHTETLRAFTRDEAEEIIRRL
Number of Associated Samples	120
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.45 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	92.75 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (94.928 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.594 % of family members)
Environment Ontology (ENVO)	Unclassified (25.362 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.623 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.23% β-sheet: 0.00% Coil/Unstructured: 50.77%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04079	SMC_ScpB	42.03
PF07883	Cupin_2	15.94
PF01842	ACT	4.35
PF11255	DUF3054	3.62
PF08241	Methyltransf_11	3.62
PF02616	SMC_ScpA	2.90
PF06197	DUF998	2.90
PF01790	LGT	2.17
PF03795	YCII	1.45
PF08734	GYD	1.45
PF01797	Y1_Tnp	0.72
PF02773	S-AdoMet_synt_C	0.72
PF13340	DUF4096	0.72
PF13649	Methyltransf_25	0.72
PF00296	Bac_luciferase	0.72
PF08448	PAS_4	0.72
PF03992	ABM	0.72
PF02463	SMC_N	0.72
PF02073	Peptidase_M29	0.72
PF01609	DDE_Tnp_1	0.72
PF00282	Pyridoxal_deC	0.72
PF13426	PAS_9	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1386	Chromosome segregation and condensation protein ScpB	Transcription [K]	42.03
COG1354	Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family	Replication, recombination and repair [L]	2.90
COG3371	Uncharacterized membrane protein	Function unknown [S]	2.90
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	2.17
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.45
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.45
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.72
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.93 %
Unclassified	root	N/A	5.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.93 %
Unclassified	root	N/A	5.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.93 %
Unclassified	root	N/A	5.07 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.33 %
Unclassified	root	N/A	5.07 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.88 %
Unclassified	root	N/A	5.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	64.49 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8.70 %
Unclassified	root	N/A	5.07 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	63.77 %
Unclassified	root	N/A	5.07 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.45 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.45 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.77 %
Unclassified	root	N/A	5.07 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.45 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.45 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.77 %
Unclassified	root	N/A	5.07 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.45 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.45 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.72 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	63.77 %
Unclassified	root	N/A	5.07 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.45 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.45 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.72 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402HI70Y	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
2124908039\|B3_v_NODE_64691_len_17576_cov_15_745221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17626	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100246500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300000887\|AL16A1W_10275512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300000956\|JGI10216J12902_104860063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1843	Open in IMG/M
3300000956\|JGI10216J12902_112618422	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300001686\|C688J18823_10563257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300002568\|C688J35102_120038241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	855	Open in IMG/M
3300004153\|Ga0063455_100848385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300004153\|Ga0063455_101585779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300004479\|Ga0062595_101446488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005178\|Ga0066688_10663076	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005435\|Ga0070714_101141723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300005458\|Ga0070681_10036636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4925	Open in IMG/M
3300005540\|Ga0066697_10659868	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005549\|Ga0070704_100796077	Not Available	844	Open in IMG/M
3300005554\|Ga0066661_10091266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1808	Open in IMG/M
3300005560\|Ga0066670_10931013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005561\|Ga0066699_10998484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300005713\|Ga0066905_102080992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005718\|Ga0068866_10009991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4053	Open in IMG/M
3300005764\|Ga0066903_101443131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300006032\|Ga0066696_10611769	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006032\|Ga0066696_10851868	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006046\|Ga0066652_101698258	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006574\|Ga0074056_11820083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300006791\|Ga0066653_10524092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300006800\|Ga0066660_10596096	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300007764\|Ga0102950_1095430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300009012\|Ga0066710_100101929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3843	Open in IMG/M
3300009012\|Ga0066710_104593772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300009088\|Ga0099830_11558198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300009090\|Ga0099827_10477608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1070	Open in IMG/M
3300009147\|Ga0114129_12116846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300009177\|Ga0105248_11056724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300009789\|Ga0126307_11212464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300009789\|Ga0126307_11588901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300010038\|Ga0126315_10836427	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300010041\|Ga0126312_10391344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	988	Open in IMG/M
3300010301\|Ga0134070_10246836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300010336\|Ga0134071_10260801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300010336\|Ga0134071_10298883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	808	Open in IMG/M
3300010360\|Ga0126372_12362877	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010366\|Ga0126379_12726648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300010371\|Ga0134125_10286855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1828	Open in IMG/M
3300010373\|Ga0134128_12108013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300010373\|Ga0134128_12472494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300010396\|Ga0134126_11446522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300010396\|Ga0134126_11751883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300010398\|Ga0126383_10779513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300010398\|Ga0126383_10968189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300012092\|Ga0136621_1033172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2125	Open in IMG/M
3300012093\|Ga0136632_10395188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300012198\|Ga0137364_11163995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012200\|Ga0137382_11270177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300012204\|Ga0137374_11201871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012350\|Ga0137372_10551048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300012350\|Ga0137372_10953984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300012355\|Ga0137369_10826873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300012357\|Ga0137384_11545991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300012359\|Ga0137385_11223056	Not Available	613	Open in IMG/M
3300012359\|Ga0137385_11531990	Not Available	531	Open in IMG/M
3300012498\|Ga0157345_1003448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300012915\|Ga0157302_10251215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300012923\|Ga0137359_10208187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1747	Open in IMG/M
3300012957\|Ga0164303_10443317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300012958\|Ga0164299_10279553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300012971\|Ga0126369_10390835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1426	Open in IMG/M
3300012971\|Ga0126369_13213121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300012984\|Ga0164309_10701654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300012985\|Ga0164308_10458614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1057	Open in IMG/M
3300012988\|Ga0164306_10491975	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300013102\|Ga0157371_10674077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300013102\|Ga0157371_11621003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300013105\|Ga0157369_10087326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3330	Open in IMG/M
3300013307\|Ga0157372_11745416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300013501\|Ga0120154_1043259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1089	Open in IMG/M
3300014058\|Ga0120149_1161591	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300014166\|Ga0134079_10263344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300014488\|Ga0182001_10043657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300014488\|Ga0182001_10242858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300014488\|Ga0182001_10452995	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300014497\|Ga0182008_10394463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300014829\|Ga0120104_1016891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1295	Open in IMG/M
3300015357\|Ga0134072_10480570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300015372\|Ga0132256_102994314	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300015372\|Ga0132256_103387891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300015373\|Ga0132257_102165447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300016319\|Ga0182033_11506676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	607	Open in IMG/M
3300017961\|Ga0187778_10348638	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300017974\|Ga0187777_10919973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300018027\|Ga0184605_10333115	Not Available	686	Open in IMG/M
3300018032\|Ga0187788_10426426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300018061\|Ga0184619_10105916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1266	Open in IMG/M
3300018089\|Ga0187774_11477320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018432\|Ga0190275_10336502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1495	Open in IMG/M
3300018469\|Ga0190270_13034667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300020010\|Ga0193749_1084370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300020070\|Ga0206356_11403094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2335	Open in IMG/M
3300020070\|Ga0206356_11448996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300025909\|Ga0207705_10234290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300025917\|Ga0207660_11491962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300025919\|Ga0207657_10122088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2143	Open in IMG/M
3300025921\|Ga0207652_10169153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1961	Open in IMG/M
3300025929\|Ga0207664_11777863	Not Available	539	Open in IMG/M
3300025934\|Ga0207686_10539156	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300025935\|Ga0207709_11778227	Not Available	513	Open in IMG/M
3300025941\|Ga0207711_11731594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300025960\|Ga0207651_10308011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300026315\|Ga0209686_1195790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300027561\|Ga0209887_1009662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2548	Open in IMG/M
3300027821\|Ga0209811_10444269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300027869\|Ga0209579_10060446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2007	Open in IMG/M
3300028138\|Ga0247684_1019023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300028754\|Ga0307297_10355051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300028755\|Ga0307316_10144136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	847	Open in IMG/M
3300028784\|Ga0307282_10050069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1864	Open in IMG/M
3300028787\|Ga0307323_10134643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300028800\|Ga0265338_10225835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1395	Open in IMG/M
3300028803\|Ga0307281_10340170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300028828\|Ga0307312_11193976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300028885\|Ga0307304_10277651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300031242\|Ga0265329_10090391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1147097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300031250\|Ga0265331_10457526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300031711\|Ga0265314_10452215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300031720\|Ga0307469_11707676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300031753\|Ga0307477_10838595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300031820\|Ga0307473_10902744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300031938\|Ga0308175_101480533	Not Available	758	Open in IMG/M
3300031996\|Ga0308176_10949974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300031996\|Ga0308176_11733923	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300032002\|Ga0307416_100350933	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300032013\|Ga0310906_10719299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300032067\|Ga0318524_10434798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300033550\|Ga0247829_11235782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300033803\|Ga0314862_0098808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300033805\|Ga0314864_0100229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.43%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	2.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Sediment	Environmental → Aquatic → Sediment	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.49%
Loam	Environmental → Terrestrial → Soil → Loam	9.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.07%
Ice	Environmental → Aquatic → Freshwater → Ice	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Sand	Environmental → Terrestrial → Soil → Sand	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.17%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2124908039	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_01960010	2070309009	Soil	DDDTAAEILMKLQRHGAEHTETLRAFTREEAEAIIRRL
B3_v_00296230	2124908039	Soil	MPHEVAFEITTKLQARGGESTETLRAFTREEAEQIIRRL
INPhiseqgaiiFebDRAFT_1002465002	3300000364	Soil	PTDEVALEIITKLQRHGAEVTETLRAFTRDEAEEIIRKL*
AL16A1W_102755123	3300000887	Permafrost	VAMEILMKLNRYGAEHTETLRAFTRDEAEEIVRKL*
JGI10216J12902_1048600633	3300000956	Soil	AIEILMKLNRYGAEHTETLRAFTREEAEEIVRKL*
JGI10216J12902_1126184221	3300000956	Soil	APDDGVAVEILMKLQRYGAEHTETLRAFTREEAEEIVKRL*
C688J18823_105632573	3300001686	Soil	DDDVAIEILMKLNRYGAEHTETLRAFTRTEAEEIVRKL*
C688J35102_1200382411	3300002568	Soil	FEAPDDGLAVEILMKLQRFGAEHTETLRAFTRDEAEEIIRRL*
Ga0063455_1008483851	3300004153	Soil	APTDEVALEIITKLQRHGAEVTETLRAFTRDEAEEIIRKL*
Ga0063455_1015857792	3300004153	Soil	APTDEVALEIITKLQRHGAEVTETLRAFTRDEAEQIIRKL*
Ga0062595_1014464881	3300004479	Soil	IFEAETDEAALEIITKLQRTGSAETETLRAFTRDEAEAIIRKL*
Ga0066688_106630761	3300005178	Soil	EAPDDELAVEIVLRLQRFGAEHTETLRAFTRNEAEEIIRRL*
Ga0070714_1011417231	3300005435	Agricultural Soil	PDDETAAEIILKLQRHGAEHTETLRAFTRDEAEEIIRKL*
Ga0070681_100366366	3300005458	Corn Rhizosphere	APDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEDIIKKL*
Ga0066697_106598681	3300005540	Soil	DDETAAEIILKLQRHGAEHTETLRAFTREEAEEIIRKL*
Ga0070704_1007960771	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EIFEAPNDEIAVEILLKLQRFGAEHTETLRAFTRDDAEEIIRRL*
Ga0066661_100912664	3300005554	Soil	DEVAVEILMKLQRYGAEHTETLRAFTRQEAEEIVKRL*
Ga0066670_109310131	3300005560	Soil	AIEILMKLNRYGAEHTETLRAFTREEAEGIVRKL*
Ga0066699_109984841	3300005561	Soil	VAIEILMKLNRYGAEHTETLRAFTREEAEEIVRKL*
Ga0066905_1020809921	3300005713	Tropical Forest Soil	ALEIVTKLSHHGAEQTETLRAFTRDEAEDIIKKL*
Ga0068866_100099911	3300005718	Miscanthus Rhizosphere	DVAIEILMKLNRYGAEHTETLRAFTRTEAEEIVRKL*
Ga0066903_1014431313	3300005764	Tropical Forest Soil	TAAEILMKLQRHGAEHTETLRAFTRDEAEAIIRRL*
Ga0066696_106117693	3300006032	Soil	DDETATEIILKLQRHGAEHTETLRAFTRDEAEAIIRRL*
Ga0066696_108518682	3300006032	Soil	DETAAEIIMKLQRHGAEHTETLRAFTREEAEEIIRKL*
Ga0066652_1016982582	3300006046	Soil	PDDEVAIEILMKLNRYGAEHTETLRAFTREEAEEIVRKL*
Ga0074056_118200832	3300006574	Soil	DDDVAIEILMKLNRYGAEHTETLRAFTRAEAEEIVRKL*
Ga0066653_105240921	3300006791	Soil	DDTAAEILMKLQRHGAEHTETLRAFTRDEAEEIIRRL*
Ga0066660_105960961	3300006800	Soil	DDEVAIEILMKLNRYGAEHTETLRAFTREEAEEIVRKL*
Ga0102950_10954302	3300007764	Soil	DDETALEIMTRLGRHGAEQTETLRAFTRQEAEEIIKKL*
Ga0066710_1001019295	3300009012	Grasslands Soil	ETAAEIIMKLQRHGAEHTETLRAFTRDEAEEIIRRV
Ga0066710_1045937721	3300009012	Grasslands Soil	DDEVAIEILMKLQRHGAEQTETLRAFTREEAEDIVKRL
Ga0099830_115581981	3300009088	Vadose Zone Soil	FEAPDDDVAVEILMKLQRYGAEHTETLRGFTREEAEAIVRKL*
Ga0099827_104776081	3300009090	Vadose Zone Soil	DAPDDDVAMEILMKLNRYGAEHTETLRAFTRGEAEEIIRRL*
Ga0114129_121168461	3300009147	Populus Rhizosphere	DDDVAIEILMKLNRYGAEHTETLRAFTRDEAEEIVRKL*
Ga0105248_110567243	3300009177	Switchgrass Rhizosphere	TAAEILMKLQRHGAEHTETLRGFTREEAEAIVKRL*
Ga0126307_112124642	3300009789	Serpentine Soil	DDETAAEILLKLQRFGAEHTETLRAFTREEAEAIVRRL*
Ga0126307_115889012	3300009789	Serpentine Soil	DDETAIEILMKLQQFGAEHTETLRAFTREEAEEIIRRI*
Ga0126315_108364272	3300010038	Serpentine Soil	AVEILMKLQRFGAEHTETLRAFTRDEAEEIIRRL*
Ga0126312_103913443	3300010041	Serpentine Soil	VAMEIIMRLNRFAAEHTETLRAFTREEAAEIIRRI*
Ga0134070_102468363	3300010301	Grasslands Soil	EAPDDDVAVEILMKLQRYGAEHTETLRAFTRDEAEQIVRKL*
Ga0134071_102608013	3300010336	Grasslands Soil	AVEILMKLQRYGAEHTETLRGFTREEAEEIVKRL*
Ga0134071_102988831	3300010336	Grasslands Soil	DDETATEIILKLQRHGAEHTETLRAFTRDEAEEIIRRL*
Ga0126372_123628771	3300010360	Tropical Forest Soil	PDDETALQIVTQLAHHGAEQTETLRAFTRDEAEEIIKKL*
Ga0126379_127266481	3300010366	Tropical Forest Soil	DELAVEILMKLQRFGAEHTETLRAFTRDEAEEIIRRL*
Ga0134125_102868554	3300010371	Terrestrial Soil	VALEIITKLQRHGAEATETLRAFTRDEAEAIIRKL*
Ga0134128_121080132	3300010373	Terrestrial Soil	DDDTALEIVTKLSHHGAEQTETLRAFTRDEAEDIIKKL*
Ga0134128_124724941	3300010373	Terrestrial Soil	DDEVAIEILMKLNRYGAEHTETLRAFTREEAEGIVRKL*
Ga0134126_114465221	3300010396	Terrestrial Soil	SVAMEILMKLNRYGAEHTETLPAFTREEAEEIVRKL*
Ga0134126_117518831	3300010396	Terrestrial Soil	LEAETDEAALEIITKLQRTGSAETETLRAFTRDEAEAIIRKL*
Ga0126383_107795131	3300010398	Tropical Forest Soil	DTAAEILMKLQRHGAEHTETLRAFTRDEAEAIVKRL*
Ga0126383_109681893	3300010398	Tropical Forest Soil	AQDDETATEIILKLQRHGAEHTETLRAFTRDEAEEIIRRI*
Ga0136621_10331724	3300012092	Polar Desert Sand	DDERAVEILMKLQRYGAEHTETLRAFTREEAEAIIRRL*
Ga0136632_103951882	3300012093	Polar Desert Sand	VEIFEAPNDDIALEILMKLQRFGAEHSETLRAFTRDEAEQIVRKL*
Ga0137364_111639952	3300012198	Vadose Zone Soil	DTAAEILMKLQRHGAEHTETLRAFTRDEAEEIIRRL*
Ga0137382_112701772	3300012200	Vadose Zone Soil	ETAAEIILKLQRHGAEHTETLRAFTRDEAEEIIRKL*
Ga0137374_112018711	3300012204	Vadose Zone Soil	IFEAPTDDIAIEVVMKLNRYGAEQTETLRAFTREEAEEIVRKL*
Ga0137372_105510482	3300012350	Vadose Zone Soil	DDTAVEILLKLQRYGAEHTETLRAFTRDEAEAIIRKL*
Ga0137372_109539841	3300012350	Vadose Zone Soil	DVAVEILMKLQRYGAEHTETLRAFTRSEAEAIVKKL*
Ga0137369_108268731	3300012355	Vadose Zone Soil	APDDDIAVEILLKLQRYGAEHTETLRAFTRDEAEEIIRKL*
Ga0137384_115459912	3300012357	Vadose Zone Soil	ALEIVTKLSHHGAEQTETLRAFTRDEAEGIIKKL*
Ga0137385_112230561	3300012359	Vadose Zone Soil	ETAAEIILKLQRHGAEHTETLRAFTRNEAEEIIRKL*
Ga0137385_115319901	3300012359	Vadose Zone Soil	EVFEAPDDGIALEIITKLGRHGAEETETLRAFTRDEAEEIIRRL*
Ga0157345_10034481	3300012498	Arabidopsis Rhizosphere	TPDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEAIVRRL*
Ga0157302_102512151	3300012915	Soil	AIEILMKLNRYGAEHTETLRAFTREEAEGIIRRL*
Ga0137359_102081871	3300012923	Vadose Zone Soil	PDDETALEIITKLQRHGGEETETLRAFTREEAEAIIRKL*
Ga0164303_104433173	3300012957	Soil	AIEILMKLNRYGAEHTEALRAFTREEAAGIVRRL*
Ga0164299_102795531	3300012958	Soil	NDDVAIEIVMKLNRYGAEHTETLRAFTREEAEEIVRKL*
Ga0126369_103908351	3300012971	Tropical Forest Soil	PDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEDIIRKL*
Ga0126369_132131212	3300012971	Tropical Forest Soil	ALEIVTKLSHHGAEQTETLRAFTRDEAENIIKKL*
Ga0164309_107016541	3300012984	Soil	PDDDTAAEILMKLQRHGAEHTETLRAFTRDEAEAIVRRL*
Ga0164308_104586141	3300012985	Soil	PDDDTALEIVTKLSHHGAEQTETLRAFTRDQAEGIIKKL*
Ga0164306_104919753	3300012988	Soil	DDVAIEILMKLNRYGAEHTETLRAFTRAEAEEIVRKL*
Ga0157371_106740771	3300013102	Corn Rhizosphere	DDETALEIITKLGRHGAEETETLRAFTRDEAEQIIRRL*
Ga0157371_116210033	3300013102	Corn Rhizosphere	DEALEIITKLQRHGAEETETLRAFTRDEAEEIIRKL*
Ga0157369_100873266	3300013105	Corn Rhizosphere	DDTALEIVTKLSHHGAEQTETLRAFTRDEAEDIIKKL*
Ga0157372_117454163	3300013307	Corn Rhizosphere	DDETALAIITRLGSHGAEETETLRAFTREEAEEIIRKL*
Ga0120154_10432593	3300013501	Permafrost	VAMEILMKLNRYGAEHTETLRAFTREEAEEIVRKL*
Ga0120149_11615911	3300014058	Permafrost	EVAMEILMKLNRYGAEHTETLRAFTRDEAEAIIRRL*
Ga0134079_102633441	3300014166	Grasslands Soil	DETATEIILKLQRHGAEHTETLRAFTRDEAEAIIRRL*
Ga0182001_100436571	3300014488	Soil	DEIAIEILMKLQRHGAEQTETLRAFTREEAEDIVKRL*
Ga0182001_102428582	3300014488	Soil	ETAAEILMKLQRHGAEHTETLRAFTRDEAEAIIRKL*
Ga0182001_104529951	3300014488	Soil	EQAVEILMKLQRYGAEHTETLRAFTRDEAEEIIRRL*
Ga0182008_103944631	3300014497	Rhizosphere	SDETAAEIVMKLQRHGAEHTETLRAFTREEAEEIIRKI*
Ga0120104_10168912	3300014829	Permafrost	APDDETALEIITKLGRHGAEETETLRAFTRDEAEEIIRRL*
Ga0134072_104805701	3300015357	Grasslands Soil	DDETAAEIIMKLQRHGAEHTETLRAFTRDEAEEIIRKV*
Ga0132256_1029943142	3300015372	Arabidopsis Rhizosphere	DDELAVEILMKLQRFGAEHTETLRAFTRDEAEEIIRRL*
Ga0132256_1033878911	3300015372	Arabidopsis Rhizosphere	DDATALEIITKLGRHGAEETETLRAFTRDEAEEIIRRL*
Ga0132257_1021654471	3300015373	Arabidopsis Rhizosphere	DDTVAAEILLRLQRHGAEHTETLRAFTREEAEEIIRRL*
Ga0182033_115066761	3300016319	Soil	DAPNDETAVEILLKLQRFGAEHTETLKAFTREEAEEIIRRV
Ga0187778_103486381	3300017961	Tropical Peatland	DDEVALEIVTKLQQYGGDHTETLRAFKRVEAEAIIRKL
Ga0187777_109199732	3300017974	Tropical Peatland	DDETALEIMTRLGRHGAEATETLRAFTREEAESIIKKL
Ga0184605_103331151	3300018027	Groundwater Sediment	EVAVEILMKLQRFGAEHTETLRAFTREEAENIVKRL
Ga0187788_104264261	3300018032	Tropical Peatland	SVALEIITKLGSGGAEETETLRAFTREEAEEIIRRL
Ga0184619_101059163	3300018061	Groundwater Sediment	DDETAAEIILKLQRHGAEHTETLRAFTRDEAEEIIRKL
Ga0187774_114773201	3300018089	Tropical Peatland	EAPDDETALEIVTKLGQRGGEETETLRAFTRDEAEDIIKKL
Ga0190275_103365021	3300018432	Soil	EDAVEILMKLQRFAAEHTETLRAFTREEAEQIVKAS
Ga0190270_130346671	3300018469	Soil	FECPDDDKAAEILMKLQRHGAEHTETLRGFTREEAEAIIRRL
Ga0193749_10843702	3300020010	Soil	APSDEIALEIITKLQRHGAEETETLRAFTRDEAEAIIRKL
Ga0206356_114030941	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	DTDEAALEIITKLQRTGSAETETLRAFTRDEAEEIIRKL
Ga0206356_114489962	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VLVKDPDDDTAAEILMKLQRHGAEHTETLRAFTRDEAEAIVKRL
Ga0207705_102342901	3300025909	Corn Rhizosphere	VEIFEAETDEAALEIITLLQRTGSAETETLRAFTRDEAEEIIRKL
Ga0207660_114919621	3300025917	Corn Rhizosphere	TDEAALEIITKLQRTGSAETETLRAFTRDEAEEIIRKL
Ga0207657_101220881	3300025919	Corn Rhizosphere	FEAETDEAALEIITLLQRAGSAETETLRAFTRDEAEEIIRKL
Ga0207652_101691531	3300025921	Corn Rhizosphere	EAPDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEDIIKKL
Ga0207664_117778631	3300025929	Agricultural Soil	ETALEIVTKLGQAGGEDTETLRAFTREEAEEIIRKL
Ga0207686_105391562	3300025934	Miscanthus Rhizosphere	NDEIAVEILLKLQRFGAEHTETLRAFTRDDAEEIIRRL
Ga0207709_117782272	3300025935	Miscanthus Rhizosphere	RRPTTRSVEILLKLQRFGAEHTETLRAFTRDDAEEIIRRL
Ga0207711_117315941	3300025941	Switchgrass Rhizosphere	TAAEILMKLQRHGAEHTETLRGFTREEAEAIVKRL
Ga0207651_103080113	3300025960	Switchgrass Rhizosphere	EAPDDDTALEIVTKLSHHGAEQTETLRAFTRDQAEGIIKKL
Ga0209686_11957902	3300026315	Soil	EAPDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEGIIKKL
Ga0209887_10096621	3300027561	Groundwater Sand	DDDVAMEILMKLNRYGAEHTETLRAFSRDEAEEIVRKL
Ga0209811_104442691	3300027821	Surface Soil	PDDDTAAEILMKLQRHGAEHTETLRAFTRDEAEAIVRRL
Ga0209579_100604464	3300027869	Surface Soil	APDDDTALEIVTKLSHHGAEQTETLRAFTREEAEEIIKKL
Ga0247684_10190233	3300028138	Soil	TAAEILMKLQRHGAEHTETLRAFTRDEAEAIVRRL
Ga0307297_103550512	3300028754	Soil	DTAAEILMKLQRHGAEHTETLRAFTRDEAEAIVKRL
Ga0307316_101441361	3300028755	Soil	DETAAEIILKLQRHGAEHTETLRAFTRDEAEEIIRKL
Ga0307282_100500694	3300028784	Soil	DETALEIITKLGRHGAEETETLRAFTRDEAEEIIKRL
Ga0307323_101346433	3300028787	Soil	TAAEIILKLQRHGAEHTETLRAFTRDEAEEIIRKL
Ga0265338_102258351	3300028800	Rhizosphere	FEAPDDEIALEIVTKLQHFGGDHTETLRAFTRDEAEAIIRKL
Ga0307281_103401701	3300028803	Soil	PDDDIAIEILMKLNRYGAEHTETLRAFTREEAEGIVRKL
Ga0307312_111939762	3300028828	Soil	VAVEILMKLQRYGAEHTETLRGFTREEAEEIVKRL
Ga0307304_102776513	3300028885	Soil	YDDVAIEILMKLNRYGAEHTETLRAFTRGEAEEIIRKL
Ga0265329_100903911	3300031242	Rhizosphere	VFEAPDDEIALEIVTKLQHFGGDHTETLRAFTRDEAEAIIRKL
(restricted) Ga0255312_11470973	3300031248	Sandy Soil	EAPDDATALEIITRLGQGGGEDTETLRAFTRDEAEEIIRRL
Ga0265331_104575261	3300031250	Rhizosphere	DEIALEIVTKLQHFGGDHTETLRAFTREEAEAIIRKL
Ga0265314_104522152	3300031711	Rhizosphere	QVFEAPDDEVALEIVQKLQQFGGAHAETLRAFTREEAEGIIRRL
Ga0307469_117076762	3300031720	Hardwood Forest Soil	FEAPDDETALEIITKLQRHGAEETETLRAFTRDEAEMIIRRL
Ga0307477_108385951	3300031753	Hardwood Forest Soil	DVALEIVTRLQQYGAEQTETLRAFTREEAAEIIRRL
Ga0307473_109027441	3300031820	Hardwood Forest Soil	DDETAFEIVSRLQGHGAEQTETLRAFTREEAEGIIKKL
Ga0308175_1014805331	3300031938	Soil	APDDEVAVEILLKLQRFGAEQTETLRAFTREEAEDIIRRL
Ga0308176_109499741	3300031996	Soil	EAALEIITKLQRTGSAETETLRAFTRDEAEEIIRKL
Ga0308176_117339233	3300031996	Soil	DEAALEIITKLQRTGSAETETLRAFTREEAEEIIRKL
Ga0307416_1003509333	3300032002	Rhizosphere	APDDDTAAEILMKLQRHGAEHTETLRAFTRDEAEAIIRRL
Ga0310906_107192992	3300032013	Soil	EAPDDEKAAEILMRLQRHGAEHTETLRGFTREEAESIIRRL
Ga0318524_104347981	3300032067	Soil	VFEAPNDSVALEIITKLGSGGAEETETLRAFTREEAEEIIRRL
Ga0247829_112357821	3300033550	Soil	TAAEILMKLQRHGAEHTETLRAFTRDEAEAIIRRL
Ga0314862_0098808_3_125	3300033803	Peatland	APDDETALEIVTRLGRHGAEQTETLRAFTREEAEEIIKKL
Ga0314864_0100229_577_705	3300033805	Peatland	FEAPDDDTALEIVTKLSHHGAEQTETLRAFTRDEAEIIIKKL

Hidden Markov Model


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