Metagenome / Metatranscriptome Family F055705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055705
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	58 residues
Representative Sequence	MSPATPQTRELAARESDGFHVVLLWHPRENALTVSVEDARVGDRFQLAVAPDRALD
Number of Associated Samples	117
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.68 %
% of genes near scaffold ends (potentially truncated)	81.88 %
% of genes from short scaffolds (< 2000 bps)	94.20 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.681 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.319 % of family members)
Environment Ontology (ENVO)	Unclassified (35.507 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.76% β-sheet: 36.90% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF13191	AAA_16	26.81
PF03176	MMPL	6.52
PF07730	HisKA_3	2.90
PF02574	S-methyl_trans	0.72
PF07457	DUF1516	0.72
PF11943	DUF3460	0.72
PF01695	IstB_IS21	0.72
PF02469	Fasciclin	0.72
PF02517	Rce1-like	0.72
PF12680	SnoaL_2	0.72
PF00903	Glyoxalase	0.72
PF10417	1-cysPrx_C	0.72
PF10027	DUF2269	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	6.52
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	6.52
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.90
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.90
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.90
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.90
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.72
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.72
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.72
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.72
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.61 %
Unclassified	root	N/A	12.32 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.61 %
Unclassified	root	N/A	12.32 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	31.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.94 %
Unclassified	root	N/A	12.32 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	31.16 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.04 %
Unclassified	root	N/A	12.32 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.72 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	22.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.04 %
Unclassified	root	N/A	12.32 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	22.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.04 %
Unclassified	root	N/A	12.32 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.72 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.72 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	17.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.04 %
Unclassified	root	N/A	12.32 %
Nocardioides iriomotensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides iriomotensis	0.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.72 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0619896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	585	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0416376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300000890\|JGI11643J12802_10788816	Not Available	727	Open in IMG/M
3300000956\|JGI10216J12902_100224335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	850	Open in IMG/M
3300000956\|JGI10216J12902_102936750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	690	Open in IMG/M
3300000956\|JGI10216J12902_108971763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300002243\|C687J29039_10240867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300003373\|JGI25407J50210_10028565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1447	Open in IMG/M
3300004156\|Ga0062589_102847906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300004643\|Ga0062591_100781914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300005093\|Ga0062594_101188007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300005179\|Ga0066684_10915347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	572	Open in IMG/M
3300005180\|Ga0066685_11088929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	523	Open in IMG/M
3300005294\|Ga0065705_10855843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005339\|Ga0070660_100149247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1879	Open in IMG/M
3300005341\|Ga0070691_10102684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1422	Open in IMG/M
3300005366\|Ga0070659_101548563	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005440\|Ga0070705_100661023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300005440\|Ga0070705_100681218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	805	Open in IMG/M
3300005445\|Ga0070708_100167613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2049	Open in IMG/M
3300005457\|Ga0070662_100583592	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005467\|Ga0070706_101513626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	613	Open in IMG/M
3300005518\|Ga0070699_100799846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	863	Open in IMG/M
3300005539\|Ga0068853_100668654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	989	Open in IMG/M
3300005557\|Ga0066704_10653488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300005575\|Ga0066702_10970343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	508	Open in IMG/M
3300005578\|Ga0068854_100334206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1235	Open in IMG/M
3300005764\|Ga0066903_100224777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2852	Open in IMG/M
3300005937\|Ga0081455_10436166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300006579\|Ga0074054_11854084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300006579\|Ga0074054_12125978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300006605\|Ga0074057_11535576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300006791\|Ga0066653_10225891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	953	Open in IMG/M
3300006800\|Ga0066660_10375429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1164	Open in IMG/M
3300006854\|Ga0075425_102635973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300007790\|Ga0105679_10829335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1308	Open in IMG/M
3300009012\|Ga0066710_100727194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1516	Open in IMG/M
3300009012\|Ga0066710_102760417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300009094\|Ga0111539_12900068	Not Available	555	Open in IMG/M
3300009148\|Ga0105243_10639872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300009148\|Ga0105243_11014066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	833	Open in IMG/M
3300009148\|Ga0105243_12634297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300009177\|Ga0105248_13337164	Not Available	510	Open in IMG/M
3300009818\|Ga0105072_1100636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300009840\|Ga0126313_10360435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300010036\|Ga0126305_10259169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300010040\|Ga0126308_10361055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	964	Open in IMG/M
3300010040\|Ga0126308_10442509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300010045\|Ga0126311_10272727	Not Available	1264	Open in IMG/M
3300010045\|Ga0126311_10465890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	983	Open in IMG/M
3300010166\|Ga0126306_10219157	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300010166\|Ga0126306_11320104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300010326\|Ga0134065_10094260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300010326\|Ga0134065_10382527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	561	Open in IMG/M
3300010326\|Ga0134065_10456745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300010398\|Ga0126383_11162097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300010400\|Ga0134122_10182313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1730	Open in IMG/M
3300012198\|Ga0137364_10431161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	988	Open in IMG/M
3300012198\|Ga0137364_10816711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300012200\|Ga0137382_10050199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2603	Open in IMG/M
3300012201\|Ga0137365_10205948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1469	Open in IMG/M
3300012228\|Ga0137459_1171224	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012285\|Ga0137370_10841818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300012353\|Ga0137367_10479767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300012353\|Ga0137367_10560856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	802	Open in IMG/M
3300012354\|Ga0137366_10018015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5525	Open in IMG/M
3300012355\|Ga0137369_10473274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	890	Open in IMG/M
3300012355\|Ga0137369_10813182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300012358\|Ga0137368_10455691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012502\|Ga0157347_1063212	Not Available	533	Open in IMG/M
3300012938\|Ga0162651_100092120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300012941\|Ga0162652_100033324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300012955\|Ga0164298_11504505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300012958\|Ga0164299_11336427	Not Available	550	Open in IMG/M
3300013102\|Ga0157371_11631532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300013308\|Ga0157375_13038919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300014157\|Ga0134078_10636562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300014166\|Ga0134079_10661639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300014267\|Ga0075313_1079257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	794	Open in IMG/M
3300014270\|Ga0075325_1040710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300014324\|Ga0075352_1203052	Not Available	587	Open in IMG/M
3300014965\|Ga0120193_10091949	Not Available	518	Open in IMG/M
3300014968\|Ga0157379_12350520	Not Available	531	Open in IMG/M
3300015373\|Ga0132257_100674733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1282	Open in IMG/M
3300015374\|Ga0132255_100037634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6195	Open in IMG/M
3300015374\|Ga0132255_102748211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300016341\|Ga0182035_11355477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300016445\|Ga0182038_11723660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300017659\|Ga0134083_10545614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300018027\|Ga0184605_10397543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300018032\|Ga0187788_10157887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300018032\|Ga0187788_10456229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300018056\|Ga0184623_10107372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1291	Open in IMG/M
3300018433\|Ga0066667_10788846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	806	Open in IMG/M
3300019873\|Ga0193700_1023390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1021	Open in IMG/M
3300020005\|Ga0193697_1023158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1545	Open in IMG/M
3300020012\|Ga0193732_1072291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300022756\|Ga0222622_10185016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1371	Open in IMG/M
3300025567\|Ga0210076_1021736	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300025900\|Ga0207710_10446657	Not Available	667	Open in IMG/M
3300025912\|Ga0207707_10069077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3079	Open in IMG/M
3300025927\|Ga0207687_11301153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300025938\|Ga0207704_10886768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300025941\|Ga0207711_12124225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300026041\|Ga0207639_10808454	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300026067\|Ga0207678_10894473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300026111\|Ga0208291_1037676	Not Available	880	Open in IMG/M
3300026301\|Ga0209238_1197916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300026550\|Ga0209474_10698531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300026552\|Ga0209577_10295124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1210	Open in IMG/M
3300027401\|Ga0208637_1036652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300027657\|Ga0256865_1132178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300028592\|Ga0247822_11522066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides iriomotensis	566	Open in IMG/M
3300028744\|Ga0307318_10106484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	950	Open in IMG/M
3300028768\|Ga0307280_10075179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1092	Open in IMG/M
3300028793\|Ga0307299_10035338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1823	Open in IMG/M
3300028803\|Ga0307281_10262214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300028803\|Ga0307281_10303341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300028811\|Ga0307292_10197521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300028819\|Ga0307296_10088029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1659	Open in IMG/M
3300028819\|Ga0307296_10549255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300028824\|Ga0307310_10198565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	946	Open in IMG/M
3300028828\|Ga0307312_10369633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300028875\|Ga0307289_10002980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6816	Open in IMG/M
3300028889\|Ga0247827_11251313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300030336\|Ga0247826_11115325	Not Available	630	Open in IMG/M
3300031543\|Ga0318516_10548543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300031731\|Ga0307405_12118624	Not Available	505	Open in IMG/M
3300031996\|Ga0308176_12944107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300032041\|Ga0318549_10554102	Not Available	516	Open in IMG/M
3300032043\|Ga0318556_10526749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300032068\|Ga0318553_10055635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1957	Open in IMG/M
3300032075\|Ga0310890_10796252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300032075\|Ga0310890_10957072	Not Available	687	Open in IMG/M
3300032770\|Ga0335085_12072418	Not Available	575	Open in IMG/M
3300033550\|Ga0247829_10005996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6590	Open in IMG/M
3300033550\|Ga0247829_10380324	Not Available	1158	Open in IMG/M
3300033551\|Ga0247830_10626116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.43%
Host-Associated	Host-Associated	19.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.81%
Plants	Host-Associated → Plants	19.57%
Aquatic	Environmental → Aquatic	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.80%
Sediment	Environmental → Aquatic → Sediment	2.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.45%
Roots	Host-Associated → Plants → Roots	1.45%
Marine	Environmental → Aquatic → Marine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.42%
Loam	Environmental → Terrestrial → Soil → Loam	6.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Sand	Environmental → Terrestrial → Soil → Sand	1.45%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.45%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.45%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06198961	2228664021	Soil	MSPGTPNTRELAARDSDGVHVVLLWNPTDDAVSVSVEDARAGDGFHMQVAPDRALDAFY
ICChiseqgaiiDRAFT_04163761	3300000033	Soil	MNPATPNTRELAARESNGLHVVLLWHPREDALTVSVEDDRLGDRFQLAVAPXRALXAFYH
JGI11643J12802_107888162	3300000890	Soil	MSPTTTCGARELAARESDGVHVLLLWHPDDDALTVSVEDARLGDRFRIAVAPERA
JGI10216J12902_1002243353	3300000956	Soil	MFPAVPEIRELAAREADGIHVLLLWHPRRNSVSVAVEDARAGEVFELPVPPDRALDAFYH
JGI10216J12902_1029367503	3300000956	Soil	MSPVTPQTRELAARQSDGIHVLLLWHPDENALTVSVEDARVGDCFHLAIAPD
JGI10216J12902_1089717632	3300000956	Soil	MTLSTAHARELAVRESDGVHVVLSWHPDENAVTVSVEDARFGDRFHIAVEPDRAL
C687J29039_102408671	3300002243	Soil	MNLDKGEAMSPATLETRELAARESDGLHVLLLWHPDEDAVTVSVEDERAGDRFQISVAPDRAL
JGI25407J50210_100285651	3300003373	Tabebuia Heterophylla Rhizosphere	MHPNEKEKAMSSATEHARELAARDSHGIHVRLLWHPRENGVTVSVEDSRVGD
Ga0062589_1028479061	3300004156	Soil	MTGGHMSPATPHTLELAARDSDGISVLLLWHPREDAITVSVENERHGGCFQLAVAPDRALDAFYH
Ga0062591_1007819143	3300004643	Soil	MSSTTHNTRELAARESDGLHVLLLWHPRGNALTVEVEDDRIGDGFQFAVEPERALDAFYHPF
Ga0062594_1011880072	3300005093	Soil	MSSTTDTTRELAARESDGLHVLLLWHPRDNALTVEVEDARIGDAFQLAV
Ga0066684_109153471	3300005179	Soil	MSPERQTRELAARDSDGIHVLLLWDPRENELTVAVEDARDGDRFQL
Ga0066685_110889292	3300005180	Soil	MSPATLQTRELAARESDGINVRLLWHPRENALTVSVEDARLGDCFHLAIAPDRALDAFYH
Ga0065705_108558432	3300005294	Switchgrass Rhizosphere	MSATSEIRELAARESDGINVLLLWHPRSDAVTVSVEDVRVGECFQLA
Ga0070660_1001492472	3300005339	Corn Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0070691_101026842	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0070659_1015485631	3300005366	Corn Rhizosphere	ARENHGIAVRLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0070705_1006610232	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSPATPQTRELAARESDGYHVVLLWHPRENALTVSVEDARVGDRFQLAVAPDRALDAFYHSFAYAA*
Ga0070705_1006812181	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RELAARESNGLHVLLLWHPRQDELTVSVEDTRAGNRFQLAVARDRAFDAFYHPSPTPPNASAPRR*
Ga0070708_1001676131	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATPDTRELAARESNGLHVLLLWHPRQDELTVSVEDTRAGNRFQLAVARDRAFDAFYHPSPTPPNASAPRR*
Ga0070662_1005835921	3300005457	Corn Rhizosphere	ALRESNGVRVVLLWHPREDAVTVSVEDLRADRRFELAVERERALDAYYHPFAYAA*
Ga0070706_1015136261	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATPDTRELAARESNGLHVLLLWHPRQDELTVSVEDTRAGNRFQLAVARD
Ga0070699_1007998462	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LAARESNGLHVLLLWHPRQDELTVSVEDTRAGNRFQLAVARDRAFDAFYHPSPTPPNASAPRR*
Ga0068853_1006686542	3300005539	Corn Rhizosphere	MSDTASHTRELADRESDGVHVLLLWHPAENALTVSVEDARIGDSFQFAVAPERALDAFYHPSAYAA*
Ga0066704_106534881	3300005557	Soil	MSPATSQTRELADRDCDGIHVALLWHPDENALTVSVEDTRVGDRFHLAVAPDRALDAFY
Ga0066702_109703431	3300005575	Soil	MNAAPSQTRELAARDNDGISVRLLWDPRENALAVSVEDTRAGASFDLP
Ga0068854_1003342061	3300005578	Corn Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDA
Ga0066903_1002247773	3300005764	Tropical Forest Soil	MSPTTSTTRELAARDGDGISVRLLWHPRERALTVSVEDARIGDRFQLAVAP
Ga0081455_104361662	3300005937	Tabebuia Heterophylla Rhizosphere	MSPAARQTRELAARESDGIHVLLLWHPPENALTVSVEDARFGDRFQLAVAPD
Ga0074054_118540841	3300006579	Soil	MSPVAPRELAARENHGIAVRLLWHPRENAVTVSVEGARVGDCFEFAVPPDLALDAFYHPFAHAA*
Ga0074054_121259782	3300006579	Soil	MNPATLQTRELAERDSDGIHVLLLWHPRENTLSLSVEDARVGDQFDIAVAPDRALDAFYHQFAYAA*
Ga0074057_115355762	3300006605	Soil	MSAVAPRELAARENHGIAVRLLWHPRENAVTVSVEGARVGDCFEFAVPPDLALDAFYHPFAHAA*
Ga0066653_102258911	3300006791	Soil	MSPATPQARELAARDSDGIHALLLWQPLENELTVAVEDARAGERF
Ga0066660_103754291	3300006800	Soil	MTEGAISPATPDIRELAARDCDGIHVALFWHPDENALTVSVEDARVGDCFHLAVASDRA
Ga0075425_1026359732	3300006854	Populus Rhizosphere	MSPVAPRELAARENHGVAVRLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFY
Ga0105679_108293352	3300007790	Soil	MRSANQNGGIMSPATPQTRELAARESDGIHVLLLWNPEADALTVSVEDARAGGRFQLAVAPERALDAFYHPFTYAA*
Ga0066710_1007271941	3300009012	Grasslands Soil	MSSATPATRELAARESDGVHVLLLWQPGEDALTVSVEDSRAGYRFELAVAHDRALDA
Ga0066710_1027604173	3300009012	Grasslands Soil	MSPATPQTRELAARDSDGIHVLLLWHPLENGLTVAVEDARDGDRFQLAVAPER
Ga0111539_129000681	3300009094	Populus Rhizosphere	MSHAFHDTRELAARESDGVHVRLLWHPGDDAVTVSVEDARAGDSFQLRVASDRALDA
Ga0105243_106398722	3300009148	Miscanthus Rhizosphere	IALAGPHPKGGVMSPVAPREHAARENHGVAVRLLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0105243_110140663	3300009148	Miscanthus Rhizosphere	MSPVAPRELAARENHGVAVRLLWHPRENAVTVSVEDARAGESVWLAGARDCALDAFCRPYAYAA*
Ga0105243_126342972	3300009148	Miscanthus Rhizosphere	MSPATPQTRELAARESDGYHVVLLWHPRENALTVSVEDARVGDRFQLAVAPDRALDAFY
Ga0105248_133371642	3300009177	Switchgrass Rhizosphere	MYHATQTRELAAREGDGIQVLLLWHPIENALTVSVEDSRVGGGFRLAVAPDRAL
Ga0105072_11006361	3300009818	Groundwater Sand	MNPATAQSLELAVRESDGLHVLLLWHPDENALTVTVEDARVGDRFQLAVA
Ga0126313_103604352	3300009840	Serpentine Soil	MSERRLVPATELEGGAMSPATSETRELAARDSDGIYVRLLWHPQHHDLTVSVEDAPAGDRFQIAIAPERALDAFYHPFAHAA*
Ga0126305_102591692	3300010036	Serpentine Soil	MSERRLVPATELEGGAMSPATSETRELAARDSDGIYVRLLWHPQHHDLTVSVEDARAGDRFQIAIAPERALDAFYHPFAHAA*
Ga0126308_103610553	3300010040	Serpentine Soil	MSPANPHTLELAARQSDGIHVLLLWHPREDAITVCVEDDGRGDRFQLTVAP
Ga0126308_104425093	3300010040	Serpentine Soil	MRRAPAQTRELAARESDGVHVQLLWHPDEDTLTVSVEDMGVGDRFRLAVAPE
Ga0126311_102727271	3300010045	Serpentine Soil	HTRELAARESDGIHVLLLWHPREDAVTVSVEDDRRGDRFDLAVAADQALDAFYHAFAYAA
Ga0126311_104658903	3300010045	Serpentine Soil	MSNATLQTRELAARESDGIHVRLLWHPVENALSVSVEDARAGDRFRVAVARDRAL
Ga0126306_102191571	3300010166	Serpentine Soil	MELGSGIAFEGGAMRRATTRELAARESDGIHVLLLWHSAENAVSVSVEDTRFDDRFEIAVAPD
Ga0126306_113201041	3300010166	Serpentine Soil	MSPATPKTRELAARDSDGVRVRLLWHPRENTLTASVEDARVGDRFQLAVAPAR
Ga0134065_100942602	3300010326	Grasslands Soil	MSPATPHHTRELASRESDGIYVLLLWHPREDAITVSVEDDRRGDRFQVAVAPNRALDAFYHPCAYAA*
Ga0134065_103825273	3300010326	Grasslands Soil	MSSATPATRELAARESDGVHVLLLWQPGEDALTVSVEDSRAGYRFELAVAHDRALDAFYH
Ga0134065_104567451	3300010326	Grasslands Soil	MSSATSDTRELAARESNGLHVLLLWQHPRENALTVEDARIGDGFQLSLAPECALGAFYHP
Ga0126383_111620972	3300010398	Tropical Forest Soil	MSPTTLETRELASRDSDGVHVLLLWHPRRNAITVEVEDARAGGSFLLAVAPERAL
Ga0134122_101823131	3300010400	Terrestrial Soil	DRESDGVHVLLLWHPAENALTVSVEDARIGDSFQFAVAPERALDAFYHPSAYAA*
Ga0137364_104311611	3300012198	Vadose Zone Soil	MSPALPKTRELAARDNDGVHVLLLWHPRENRLTVSVEDTRAGSEFNLAVAPDRALD
Ga0137364_108167111	3300012198	Vadose Zone Soil	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRALDAFYH
Ga0137382_100501992	3300012200	Vadose Zone Soil	MTGGLMSPATPHTDTRELAARESDGIHVLLLWNPREDAITVSVEDDHGGDRFQLAVAPDRALDVFYHPFVYAA*
Ga0137365_102059483	3300012201	Vadose Zone Soil	MTSETANTRELAARENDGLRVLLLWHPREDAVTVSVEDACAGDRFHSRSRPTAPST
Ga0137459_11712241	3300012228	Soil	LACRESDGLRVVLLWHPHEDALTLSVKDARAGQCFELAVESNRALDAFYHPFAHAG*
Ga0137370_108418181	3300012285	Vadose Zone Soil	MSPATPQTRELAARDSDGIHVLLLWDPLENGLTVAVEGARDGDRFQLAVAPER
Ga0137367_104797672	3300012353	Vadose Zone Soil	MSPATPQTRELAARDSDGIHVLLLWHPRENGLTVAVEDARVGDRFQLAVALSTVHQIA*
Ga0137367_105608562	3300012353	Vadose Zone Soil	MSSTTPDTRELAARENDGLHVLLLWHPREDELTVSVEDTRAGDRFQLVVARDRAFYHPFAYAA*
Ga0137366_100180155	3300012354	Vadose Zone Soil	MTSETAKIRELAVRESDGLRVLLLWHPREDAVTVSVEDACAGDRFQLAVAPDRALDAFYHPFSYAA*
Ga0137369_104732743	3300012355	Vadose Zone Soil	MSSATPDTRELAARDSNGLHVLLLWHPREDELTVSVEDTRAGNRFQLAVARDR
Ga0137369_108131823	3300012355	Vadose Zone Soil	VSPATPQTRELAARDSDGIHVLLLWHPHKNALTVSVEDARVGDRFQLAV
Ga0137368_104556911	3300012358	Vadose Zone Soil	MSSGTPQPRELAARDSDGIHVLLLWHPNENALSVSVEDARVGDRFQLAVAPDRA
Ga0157347_10632121	3300012502	Arabidopsis Rhizosphere	LALRESDGVRVVLLWHPREDAVTVSVEDARVGDRFQLAVAPDRALDAFYHPLAHIKCTTTP*
Ga0162651_1000921201	3300012938	Soil	MSRTTSTRELAARDCDGISVRLLWHPRENAVTLSVEDARVGHCFQLAVAPE
Ga0162652_1000333242	3300012941	Soil	MSPATPQTRELAARESDGFHVVLLWHPRENALTVSVEDARVGDRFQLAVAPDRALD
Ga0164298_115045051	3300012955	Soil	MSPATADTRELSARDDDGLNVRLLWHPRANALTVSVEDARLGDCFHLSVAPDRALDAFYH
Ga0164299_113364272	3300012958	Soil	MSRTTDTTRELAARESNGLHVLLLWHPRENALTVEVEDARIGDGFQLSVAPECALDAFYHPF
Ga0157371_116315322	3300013102	Corn Rhizosphere	MYPATADTRELSARDDDGLNVRLLWHPRANTLTVSVEDARIGDCFHLSIAPDRALDAFYHPSAYAA*
Ga0157375_130389191	3300013308	Miscanthus Rhizosphere	MTGGLMSPATTHSRELAARESDGIYVLLLWHPREDTITVSVEDDRRGNRFQLAVP
Ga0134078_106365622	3300014157	Grasslands Soil	MSPATPQTRELAARDSDGIHVLLLWHPLENGLTVAVEDARDGDRFQLAVAPERA
Ga0134079_106616392	3300014166	Grasslands Soil	MSPATPHTLELAARESDGINILLLWHPREDAITVSVEDDRHGDCFQVAVAPDRALDAFYHPF
Ga0075313_10792573	3300014267	Natural And Restored Wetlands	MRLSTSPTRELAARESDGIHVALLWHPAENALTLAVEDSHLGSRFELAVAPD
Ga0075325_10407102	3300014270	Natural And Restored Wetlands	MSPALRTRELAAREGDGIQVTLLWHPVGNALTVSVEDTRAGRGFRLAVAPDRALDAFNHPYSYAA*
Ga0075352_12030522	3300014324	Natural And Restored Wetlands	MQFDQGGAMSTAALETRELAARESDGIHVLLLWHPDGNNLTVSVEDARVGDRFQLAVAPDRALHVFYH
Ga0120193_100919491	3300014965	Terrestrial	MHFDAPAGGAMITTTPATRELAARESDGLHVSLLWHPGENALTISVEDERLEDRFQLAVAPDRAL
Ga0157379_123505202	3300014968	Switchgrass Rhizosphere	MSSTDHTRELAARESDGLHVLLLWHPRANALTVEVEDARIGDGFQFAVEPE
Ga0132257_1006747333	3300015373	Arabidopsis Rhizosphere	MSSVTTTRELAARESDGVNVVLLWHPRENAVTVEVEDSRAGECFQLVVAPD
Ga0132255_1000376341	3300015374	Arabidopsis Rhizosphere	MSLAPHTRELAARESDGIYVLLLWHPREDTLTVSVEDDRRGDRFQLEVAPNRALDAFYHP
Ga0132255_1027482112	3300015374	Arabidopsis Rhizosphere	MTNARRNEMSSTTDHTRELAARESDGLHVLLLWHPRENSLTVEVEDARIGDGFQLAVAPE
Ga0182035_113554773	3300016341	Soil	MSPTTATTRELAARDDDGISVRLLWHPLKSVLTVSVEDTRIGDRFQLAVAPE
Ga0182038_117236603	3300016445	Soil	MSPATSTSRELAARDDDGISVRLLWHPLRSALTVSVEDTRIGDRFQLAVPPDRT
Ga0134083_105456141	3300017659	Grasslands Soil	MSPATPHTRELAARESDGFHVLLLWHTRENALTVSVEDDRLGDRFQLAVAPDRAFD
Ga0184605_103975433	3300018027	Groundwater Sediment	MNPAIPNTRELAARESNGLHVVLLWHPREDALTVYVEDERLGDSFQLAVAPE
Ga0187788_101578873	3300018032	Tropical Peatland	MSPVSPRELAARENDGISVRLLWHPHENAVTVSVEDARVGDCFEFAISPD
Ga0187788_104562292	3300018032	Tropical Peatland	MSSATTHARELAARESNGIHVVLLWHPDAAELTVSVEDVRLGDRFQLGVAPERALDAFNH
Ga0184623_101073723	3300018056	Groundwater Sediment	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRVLDAF
Ga0066667_107888461	3300018433	Grasslands Soil	MSPATPHTLELAARESDGINILLLWHPREDAITVSVEDDRHGDCFQVAVAPDRALDAFYH
Ga0193700_10233901	3300019873	Soil	MSPATPQTRELAARDSDGIHVLLLWHPRENALTVFVEDARGGDRFHLAVAPDRALDA
Ga0193697_10231583	3300020005	Soil	MNPATLQTRELAERDSDGIHVLLLWHPRENTLSVSVEDARIGDHFHIAVPPSRALD
Ga0193732_10722912	3300020012	Soil	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNR
Ga0222622_101850163	3300022756	Groundwater Sediment	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRALDA
Ga0210076_10217361	3300025567	Natural And Restored Wetlands	MSPALRTRELAAREGDGIQVTLLWHPVGNALTVSVEDTRAGRGFRLAVAPDRALDA
Ga0207710_104466572	3300025900	Switchgrass Rhizosphere	MSSTTDTTRELAARESDGLHVLLLWHPRDNALTVEVEDARIGDAFQLAVAAECALDAFYHPFTYL
Ga0207707_100690772	3300025912	Corn Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFYHPFAHAA
Ga0207687_113011531	3300025927	Miscanthus Rhizosphere	MSPATADTRELAARDDDGLNVRLLWHPLANALTVSVEDARLGDCFQ
Ga0207704_108867681	3300025938	Miscanthus Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA
Ga0207711_121242252	3300025941	Switchgrass Rhizosphere	MSPVAPRELAARENHGVAVRLLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFA
Ga0207639_108084542	3300026041	Corn Rhizosphere	MSDTASHTRELADRESDGVHVLLLWHPAENALTVSVEDARIGDSFQFAVAPERALDAFYHPSAYAA
Ga0207678_108944731	3300026067	Corn Rhizosphere	ARENHGVAVRLLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFYHPFAHAA
Ga0208291_10376761	3300026111	Natural And Restored Wetlands	MSPRRAHTRELAARKGDGISVRLLWHPDDDALTVSVEDARVGDSLEIAVEPGR
Ga0209238_11979161	3300026301	Grasslands Soil	MSPATPHTLELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVA
Ga0209474_106985311	3300026550	Soil	MSPATSQTRELAARDCDGIHVVLLWHPRENALTLSVEDARVGDRFHLAVARDR
Ga0209577_102951241	3300026552	Soil	MSPATSQTRELADRDCDGIHVALLWHPDENALTVSVEDTRVGDRFHLAV
Ga0208637_10366522	3300027401	Soil	MRPATRQTRVLAERDSDGIHVLLLWHPRENTLSLSVEDARVGDQFDIAVAPDRALDAFYH
Ga0256865_11321782	3300027657	Soil	MSPATPHTRELAARESDGINVVLLWHPDENALTVSVEDAHLGDRFQIAVAPE
Ga0247822_115220662	3300028592	Soil	MTRVPTESRELAARESDGIHVLLLWHPRENAVTVTVEDARVGDRFQLAVAPDRALDAFYHPFRYSV
Ga0307318_101064843	3300028744	Soil	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRVLDAFYHHFAYAA
Ga0307280_100751793	3300028768	Soil	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAP
Ga0307299_100353381	3300028793	Soil	MNPATLHTRELAERDSDGIHVLLLWHPRENTLSVSVEDAGIGDHFHIAVPPSRALDAFYHPF
Ga0307281_102622142	3300028803	Soil	MSPATPNTRELASRESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRALD
Ga0307281_103033411	3300028803	Soil	MNPAKHSRELAARESDGLHVVLLWHPRENALTVSVEDGRVGDCFQLAVAPDR
Ga0307292_101975212	3300028811	Soil	MNPATLHTRELAERDSDGIHVLLLWHPRENTLSVSVEDAGIGDHFHIA
Ga0307296_100880291	3300028819	Soil	MSPATPQTRELAARESDGIHVLLFWDPRENAITVSVEDARVGDCFQLAVSPERALDAFHH
Ga0307296_105492553	3300028819	Soil	MSPATPQTRELAARESDGIHVLLLWHPRENAITVSVEDARVGDCFQLAVSPERALDAF
Ga0307310_101985653	3300028824	Soil	MSPANPHTLELAARESHGLHVLLLWHPREDAITVSVEDDRRGDRFQLAVAPNRALDA
Ga0307312_103696332	3300028828	Soil	MSPATPNTRELAARESNGIYVLLLWHPREDAITVSVEDDRRGDRFRIAVAPNRALDAFYHPF
Ga0307289_100029807	3300028875	Soil	MSPATPHTRELATRESDGIYVLLLWHPREHAITVSVEDDRRGDRFQVAV
Ga0247827_112513132	3300028889	Soil	MSPAAPHTRELAARDCDGIHVVLLWHPDENALTVSVDDVRAGDHFQVAVPPDRALDAFYHPF
Ga0247826_111153252	3300030336	Soil	MSPATQTRELAAREGDGIQVTLLWRPGDNALTVSVEDTRAGRGFRLAVAPDRESE
Ga0318516_105485431	3300031543	Soil	MSPTTATTRELAARDDDGISVRLLWHPLRSALTVLVEDTRIGDRFQLAVPPER
Ga0307405_121186241	3300031731	Rhizosphere	MSPAVRRSRELAARESDGIQVLLFWHPDENALTVSVEDARVGDRFQLAVAPD
Ga0308176_129441072	3300031996	Soil	MHTETSTRELAARENDGVSVRLLWHPRMNSVTVSVEDSRVGDRFHLAVAADRA
Ga0318549_105541021	3300032041	Soil	MNPVTPQARELDARESDGIHVLLLWHPREDTVTVSVDDTRAGQRFDLAVARDRALEA
Ga0318556_105267491	3300032043	Soil	MSPTTSTSRELAARDNDGISVRLLWHPRESALTVSVEDARIGDRFQLAVPPERALDAFY
Ga0318553_100556353	3300032068	Soil	MSPTTSTSRELAARDNDGISVRLLWHPRESALTVSVEDTRVGDRFRLAVSPE
Ga0310890_107962522	3300032075	Soil	MSHAFHDTRELAARESDGVHVRLLWHPGDDAVTVSVEDARAGDSFQLRVASDRALDAF
Ga0310890_109570722	3300032075	Soil	MTLSTAHARELAVRESDGVHVVLSWHPDENAVTVSVEDAR
Ga0335085_120724181	3300032770	Soil	MTAMESGAREPSTGRELASRESDGVLVLLLWHPDDDAVTVTVDDSRAGRSFELAVDRDRALDAFYHPFA
Ga0247829_100059961	3300033550	Soil	MSPATQTRELAAREGDGIEVTLLWRPADDALTVSVEDTRAGRGFDLAVAPDRALDAFY
Ga0247829_103803242	3300033550	Soil	MTLSTAHARELAVRENDGVHVVLSWHPDENAVSVSVEDARFGDRFHMAVAPD
Ga0247830_106261162	3300033551	Soil	MTLSTAHARELAVRENDGVHVVLSWHPDENAVSVSVEDARFGDRFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences