Metagenome / Metatranscriptome Family F055658

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055658
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	47 residues
Representative Sequence	MPTKKPDPTPETEVAKAIVSELGVNDEPTPTEPKVVETKNGNTITYN
Number of Associated Samples	89
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.30 %
% of genes near scaffold ends (potentially truncated)	14.49 %
% of genes from short scaffolds (< 2000 bps)	65.94 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (37.681 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (31.884 % of family members)
Environment Ontology (ENVO)	Unclassified (84.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.551 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 10.67% Coil/Unstructured: 89.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF12236	Head-tail_con	57.97
PF17212	Tube	2.17
PF13155	Toprim_2	1.45
PF02739	5_3_exonuc_N	1.45
PF00255	GSHPx	0.72
PF03796	DnaB_C	0.72
PF11090	Phage_T7_Gp13	0.72
PF05396	Phage_T7_Capsid	0.72
PF07847	PCO_ADO	0.72
PF03906	Phage_T7_tail	0.72
PF01367	5_3_exonuc	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	2.17
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.72
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.72
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.09 %
Unclassified	root	N/A	23.91 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	38.41 %
cellular organisms	root	All Organisms → cellular organisms	37.68 %
Unclassified	root	N/A	23.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.25 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	23.19 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.52 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.25 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	7.25 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	5.07 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	2.17 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Jalkavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus	5.07 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	2.17 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.71 %
Unclassified	root	N/A	23.91 %
bacterium TMED161	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	23.19 %
Jalkavirus S08C159	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	5.07 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	2.17 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000947\|BBAY92_10025593	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1607	Open in IMG/M
3300001937\|GOS2252_1002018	All Organisms → Viruses → Predicted Viral	2598	Open in IMG/M
3300001961\|GOS2240_1048457	All Organisms → cellular organisms → Bacteria → Proteobacteria	3210	Open in IMG/M
3300001974\|GOS2246_10159230	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1338	Open in IMG/M
3300002040\|GOScombined01_102279032	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300002482\|JGI25127J35165_1008402	All Organisms → Viruses → Predicted Viral	2664	Open in IMG/M
3300002482\|JGI25127J35165_1009575	All Organisms → cellular organisms → Bacteria → Proteobacteria	2478	Open in IMG/M
3300002482\|JGI25127J35165_1086034	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	643	Open in IMG/M
3300002483\|JGI25132J35274_1018086	All Organisms → Viruses → Predicted Viral	1689	Open in IMG/M
3300002488\|JGI25128J35275_1004710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	3768	Open in IMG/M
3300002488\|JGI25128J35275_1027721	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300002488\|JGI25128J35275_1094943	Not Available	605	Open in IMG/M
3300005608\|Ga0066840_10138126	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300006024\|Ga0066371_10027403	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300006735\|Ga0098038_1010218	All Organisms → Viruses → Predicted Viral	3688	Open in IMG/M
3300006735\|Ga0098038_1209436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	628	Open in IMG/M
3300006737\|Ga0098037_1020480	All Organisms → Viruses → Predicted Viral	2475	Open in IMG/M
3300006737\|Ga0098037_1180035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	699	Open in IMG/M
3300006749\|Ga0098042_1006722	All Organisms → Viruses → Predicted Viral	3802	Open in IMG/M
3300006749\|Ga0098042_1030231	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1542	Open in IMG/M
3300009550\|Ga0115013_10106465	Not Available	1601	Open in IMG/M
3300009593\|Ga0115011_10805998	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	778	Open in IMG/M
3300009677\|Ga0115104_10474600	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1355	Open in IMG/M
3300009794\|Ga0105189_1000091	All Organisms → cellular organisms → Bacteria	8038	Open in IMG/M
3300012919\|Ga0160422_10012101	All Organisms → cellular organisms → Bacteria	5090	Open in IMG/M
3300012919\|Ga0160422_10058629	All Organisms → Viruses → Predicted Viral	2242	Open in IMG/M
3300012919\|Ga0160422_10105989	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1660	Open in IMG/M
3300012919\|Ga0160422_10383259	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	874	Open in IMG/M
3300012919\|Ga0160422_10427763	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	827	Open in IMG/M
3300012919\|Ga0160422_10838634	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	591	Open in IMG/M
3300012919\|Ga0160422_10972772	Not Available	549	Open in IMG/M
3300012919\|Ga0160422_11051982	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	527	Open in IMG/M
3300012920\|Ga0160423_10307282	Not Available	1091	Open in IMG/M
3300012920\|Ga0160423_11195686	Not Available	507	Open in IMG/M
3300012928\|Ga0163110_10081254	All Organisms → Viruses → Predicted Viral	2121	Open in IMG/M
3300012928\|Ga0163110_10217983	All Organisms → Viruses → Predicted Viral	1360	Open in IMG/M
3300012928\|Ga0163110_11219886	Not Available	605	Open in IMG/M
3300012928\|Ga0163110_11351297	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	575	Open in IMG/M
3300012952\|Ga0163180_10051789	All Organisms → Viruses → Predicted Viral	2474	Open in IMG/M
3300012952\|Ga0163180_10484104	Not Available	921	Open in IMG/M
3300012953\|Ga0163179_10019048	All Organisms → Viruses → Predicted Viral	4533	Open in IMG/M
3300012953\|Ga0163179_10924208	Not Available	756	Open in IMG/M
3300012953\|Ga0163179_11208068	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	669	Open in IMG/M
3300017709\|Ga0181387_1017758	All Organisms → Viruses → Predicted Viral	1378	Open in IMG/M
3300017710\|Ga0181403_1109283	Not Available	578	Open in IMG/M
3300017713\|Ga0181391_1001723	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	6348	Open in IMG/M
3300017719\|Ga0181390_1030567	All Organisms → Viruses → Predicted Viral	1687	Open in IMG/M
3300017720\|Ga0181383_1011250	All Organisms → Viruses → Predicted Viral	2392	Open in IMG/M
3300017720\|Ga0181383_1037497	All Organisms → Viruses	1304	Open in IMG/M
3300017724\|Ga0181388_1046554	Not Available	1050	Open in IMG/M
3300017726\|Ga0181381_1011965	All Organisms → Viruses → Predicted Viral	2028	Open in IMG/M
3300017726\|Ga0181381_1080682	Not Available	695	Open in IMG/M
3300017730\|Ga0181417_1006170	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	3211	Open in IMG/M
3300017731\|Ga0181416_1000161	All Organisms → cellular organisms → Bacteria	17756	Open in IMG/M
3300017737\|Ga0187218_1054649	Not Available	990	Open in IMG/M
3300017739\|Ga0181433_1035853	All Organisms → Viruses → Predicted Viral	1284	Open in IMG/M
3300017739\|Ga0181433_1066582	Not Available	901	Open in IMG/M
3300017748\|Ga0181393_1035347	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300017750\|Ga0181405_1078079	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	848	Open in IMG/M
3300017755\|Ga0181411_1065228	Not Available	1106	Open in IMG/M
3300017755\|Ga0181411_1114173	Not Available	791	Open in IMG/M
3300017756\|Ga0181382_1131822	Not Available	661	Open in IMG/M
3300017756\|Ga0181382_1180168	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	540	Open in IMG/M
3300017759\|Ga0181414_1113251	Not Available	712	Open in IMG/M
3300017760\|Ga0181408_1008496	All Organisms → Viruses → Predicted Viral	2915	Open in IMG/M
3300017764\|Ga0181385_1030452	All Organisms → Viruses → Predicted Viral	1709	Open in IMG/M
3300017768\|Ga0187220_1189922	Not Available	619	Open in IMG/M
3300017769\|Ga0187221_1058889	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300017769\|Ga0187221_1072796	Not Available	1075	Open in IMG/M
3300017772\|Ga0181430_1029923	All Organisms → Viruses → Predicted Viral	1749	Open in IMG/M
3300017772\|Ga0181430_1140526	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	704	Open in IMG/M
3300017776\|Ga0181394_1169961	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	672	Open in IMG/M
3300017779\|Ga0181395_1032116	All Organisms → Viruses → Predicted Viral	1771	Open in IMG/M
3300020245\|Ga0211711_1027615	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	923	Open in IMG/M
3300020246\|Ga0211707_1005100	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300020273\|Ga0211629_1045599	Not Available	895	Open in IMG/M
3300020278\|Ga0211606_1041279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	946	Open in IMG/M
3300020306\|Ga0211616_1002198	All Organisms → Viruses → Predicted Viral	3199	Open in IMG/M
3300020306\|Ga0211616_1020006	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1014	Open in IMG/M
3300020339\|Ga0211605_1104096	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	549	Open in IMG/M
3300020350\|Ga0211599_1143136	Not Available	556	Open in IMG/M
3300020360\|Ga0211712_10008616	All Organisms → Viruses → Predicted Viral	2793	Open in IMG/M
3300020377\|Ga0211647_10013192	All Organisms → Viruses → Predicted Viral	3466	Open in IMG/M
3300020392\|Ga0211666_10265279	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	648	Open in IMG/M
3300020392\|Ga0211666_10319287	Not Available	580	Open in IMG/M
3300020393\|Ga0211618_10180687	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	726	Open in IMG/M
3300020394\|Ga0211497_10060289	All Organisms → Viruses → Predicted Viral	1619	Open in IMG/M
3300020401\|Ga0211617_10042001	All Organisms → Viruses → Predicted Viral	1932	Open in IMG/M
3300020411\|Ga0211587_10207314	Not Available	819	Open in IMG/M
3300020420\|Ga0211580_10284554	Not Available	679	Open in IMG/M
3300020422\|Ga0211702_10292579	Not Available	512	Open in IMG/M
3300020428\|Ga0211521_10000591	All Organisms → cellular organisms → Bacteria	31471	Open in IMG/M
3300020430\|Ga0211622_10346126	Not Available	637	Open in IMG/M
3300020433\|Ga0211565_10070640	All Organisms → Viruses → Predicted Viral	1493	Open in IMG/M
3300020436\|Ga0211708_10020156	All Organisms → cellular organisms → Bacteria → Proteobacteria	2524	Open in IMG/M
3300020438\|Ga0211576_10101757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300020441\|Ga0211695_10102213	Not Available	956	Open in IMG/M
3300020446\|Ga0211574_10000184	All Organisms → cellular organisms → Bacteria	35957	Open in IMG/M
3300020446\|Ga0211574_10424192	Not Available	574	Open in IMG/M
3300020450\|Ga0211641_10371717	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	692	Open in IMG/M
3300020463\|Ga0211676_10000620	All Organisms → cellular organisms → Bacteria	38245	Open in IMG/M
3300020467\|Ga0211713_10664563	Not Available	506	Open in IMG/M
3300020468\|Ga0211475_10358380	Not Available	711	Open in IMG/M
3300020469\|Ga0211577_10032696	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	3931	Open in IMG/M
3300020469\|Ga0211577_10064574	All Organisms → Viruses → Predicted Viral	2619	Open in IMG/M
3300022046\|Ga0224897_100419	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300022074\|Ga0224906_1005218	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	5480	Open in IMG/M
3300022074\|Ga0224906_1012733	All Organisms → cellular organisms → Bacteria	3199	Open in IMG/M
3300022074\|Ga0224906_1053002	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300022074\|Ga0224906_1071352	Not Available	1067	Open in IMG/M
3300025086\|Ga0208157_1002400	All Organisms → cellular organisms → Bacteria → Proteobacteria	7833	Open in IMG/M
3300025101\|Ga0208159_1005507	All Organisms → Viruses → Predicted Viral	3863	Open in IMG/M
3300025101\|Ga0208159_1026228	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1359	Open in IMG/M
3300025102\|Ga0208666_1007917	All Organisms → Viruses → Predicted Viral	3815	Open in IMG/M
3300025127\|Ga0209348_1007030	All Organisms → Viruses → Predicted Viral	4712	Open in IMG/M
3300025127\|Ga0209348_1010274	All Organisms → Viruses → Predicted Viral	3762	Open in IMG/M
3300025127\|Ga0209348_1036920	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1718	Open in IMG/M
3300025127\|Ga0209348_1052849	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	1365	Open in IMG/M
3300025132\|Ga0209232_1009116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	4164	Open in IMG/M
3300025132\|Ga0209232_1015037	All Organisms → Viruses → Predicted Viral	3108	Open in IMG/M
3300025132\|Ga0209232_1043616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	1666	Open in IMG/M
3300025151\|Ga0209645_1001496	All Organisms → cellular organisms → Bacteria	11670	Open in IMG/M
3300026134\|Ga0208815_1007910	All Organisms → Viruses	1585	Open in IMG/M
3300026134\|Ga0208815_1011026	All Organisms → Viruses → Predicted Viral	1270	Open in IMG/M
3300027859\|Ga0209503_10005112	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	5990	Open in IMG/M
3300027906\|Ga0209404_10924103	Not Available	596	Open in IMG/M
3300029309\|Ga0183683_1000145	Not Available	40600	Open in IMG/M
3300029309\|Ga0183683_1008154	All Organisms → Viruses → Predicted Viral	2859	Open in IMG/M
3300029309\|Ga0183683_1017973	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300029309\|Ga0183683_1036638	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	802	Open in IMG/M
3300029309\|Ga0183683_1042122	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	703	Open in IMG/M
3300029309\|Ga0183683_1045624	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	653	Open in IMG/M
3300029319\|Ga0183748_1008808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	4356	Open in IMG/M
3300029787\|Ga0183757_1000613	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	18500	Open in IMG/M
3300029787\|Ga0183757_1004032	All Organisms → cellular organisms → Bacteria	5238	Open in IMG/M
3300029792\|Ga0183826_1011235	All Organisms → Viruses → Predicted Viral	1490	Open in IMG/M
3300029792\|Ga0183826_1027213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Jalkavirus → Jalkavirus S08C159	909	Open in IMG/M
3300031774\|Ga0315331_10016404	All Organisms → cellular organisms → Bacteria	5472	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.28%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.28%
Algae	Host-Associated → Algae	0.72%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.28%
Green Algae	Host-Associated → Algae → Green Algae	0.72%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	39.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	31.88%
Strait	Environmental → Aquatic → Marine → Strait	25.36%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.90%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	31.88%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	28.99%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	25.36%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	10.14%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.90%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	31.88%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	25.36%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.19%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	5.80%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.35%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.62%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	2.17%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.17%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.72%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300001937	Marine microbial communities from the Equatorial Pacific Ocean - GS037	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009794	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300020245	Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX556111-ERR599135)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020273	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX556047-ERR598999)	Environmental	Open in IMG/M
3300020278	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556076-ERR599151)	Environmental	Open in IMG/M
3300020306	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)	Environmental	Open in IMG/M
3300020339	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX555929-ERR599080)	Environmental	Open in IMG/M
3300020350	Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX556036-ERR599084)	Environmental	Open in IMG/M
3300020360	Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX555918-ERR599165)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300022046	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300026134	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY92_100255932	3300000947	Macroalgal Surface	MPTKKPNPKSETPDIEPAKAVVSKLGVNDEPTPIEPRVVKTKNGNTMTFN*
GOS2252_10020185	3300001937	Marine	MPSKKPDQPKTDEAKAVVSKLGVNDNPAPNKPRVVQTKNGRTITYN*
GOS2240_10484576	3300001961	Marine	MPTKKPNSKTETPDTEPAKAIVSKLGVNDVPSPTKPKVVKTKNGNTMTFN*
GOS2246_101592302	3300001974	Marine	MMPTKKNDETKTPETEVAKAVVSKLGVNDNPAPNKPRVVETKNGRTITYN*
GOScombined01_1022790325	3300002040	Marine	MPTKKNDETKTPETEVAKAVVSKLGVNDNPAPNKPRVVETKNGRTITYN*
JGI25127J35165_10084022	3300002482	Marine	MPTKKPDPKTETPKTEVAKAVVSKLGVNDEPTPTEPKVVKTKNGNTMTFN*
JGI25127J35165_10095751	3300002482	Marine	MPTKKPNKTTETPDTDVAKAIVSELGVNDTPAPYEPKVVKTKNGNTIIFN*
JGI25127J35165_10860342	3300002482	Marine	MPTKKSDTETKKAETEPAKAVVSKLGVNDEPAPYKPKVVETKNGRTMTYN*
JGI25132J35274_10180862	3300002483	Marine	MPSKKPDPKPKTEPAKAIVSQLGINDEPTPTEPKVVETKNGRTMTYN*
JGI25128J35275_10047106	3300002488	Marine	MPTKKPDPKIETTDTAKAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN*
JGI25128J35275_10277211	3300002488	Marine	MPTKKPDPKPETDTSKAVVSRLGVNDDPVSTEPKIVKTKNGNTITYN*
JGI25128J35275_10949432	3300002488	Marine	MPTKKPDPKPETDTSKAVVSRLGVNDEPVVGKPTIVKTKNGNTITNN*
Ga0066840_101381261	3300005608	Marine	MPTKKPDPTPETEPAKAVVSKLGINDEPTPTKPKVVETKNGR
Ga0066371_100274032	3300006024	Marine	MPTKKPNPAPKTPDTEPAKAVVSKLGVNDEPKATGPRVVETKNGRTMTYN*
Ga0098038_10102185	3300006735	Marine	MPTKKSSTKTQKPDTAKAVISKLGVNDQPNPTEPKVVQTKNGRTLTYS*
Ga0098038_12094362	3300006735	Marine	MPSKKPDQPKTDTAKAVVSKLGVNDNPKPTGPKVVETKNGRTMTYN*
Ga0098037_10204804	3300006737	Marine	MPTKKPDPKTDTTDTANAVVSRLGVNDPNPTSSKAGSVKTKNGNTITTN*
Ga0098037_11800352	3300006737	Marine	MPTKKPDPTPETEAAKAVVSKLGVNDNPKPTGPKVVETKNGRTMTYN*
Ga0098042_10067225	3300006749	Marine	MPTKKSDSKSEPTKAVVSKLGVNDEPTATESKVVKTKNGNTITFN*
Ga0098042_10302312	3300006749	Marine	MPTKKNNSTPETEAAKAVVSKLGVNDDPKPTSPKVVETKNGRTMTYN*
Ga0115013_101064652	3300009550	Marine	MPTKKSDPTPETEAAKAVVSKLGVNDDPKPNQPKVVETKNGRTMTYN*
Ga0115011_108059982	3300009593	Marine	MPTKKPNSEPKTPETEPAKAVVSKLGVNDEPKATGPRVVETKNGRTMTYN*
Ga0115104_104746002	3300009677	Marine	MPTKKPDPKPETEVAKAIVSELGVNDEPTPTEPKVVETKNGNTITYN*
Ga0105189_100009110	3300009794	Marine Oceanic	MPTKKPKSTPETDTAKAVVSKLGVNDEPKKTGPRVVETKNGRTMTYS*
Ga0160422_100121017	3300012919	Seawater	MPSKKPDLKAKTEPAKAVVSKLGVNDEPTPTKPRVVETKNGRTMTYN*
Ga0160422_100586295	3300012919	Seawater	MPTKKPDPKAETTTTEVAKAVVSEIGVIEEPTSSEPKVVKTKNGNTITYN*
Ga0160422_101059892	3300012919	Seawater	MPTKKPNSKTETPDTEPAKAIVSKLGVNDVPTPTKPKVVKTKNGNTMTFN*
Ga0160422_103832592	3300012919	Seawater	MPSKKSSTKTSKPDTAKAVVSKLGVNDEPTSYEPKVVKTKNGRTITLN*
Ga0160422_104277632	3300012919	Seawater	MPTKKSSSKTAKPDTAKAVVSKLGVNDEPAPYKPKVVKTKNGRTITFN*
Ga0160422_108386342	3300012919	Seawater	MPSKKSSTKTSNPDTAKAVVSKLGVNDEPTSYEPKVVKTKNGRTITLN*
Ga0160422_109727722	3300012919	Seawater	MPTKKPEENKAPETDVAKAVVSKLGVNDKPKKTGPRVVETKNGRTMTYN*
Ga0160422_110519822	3300012919	Seawater	MPSKKSSTKTTKPDTAKAVVSKLGVNDQPNPTKPKVVQTKNGRTLTYS*
Ga0160423_103072822	3300012920	Surface Seawater	MPTKKNDETKTPKTEVAKAIVSELGVNDEPTPSELKVVRTKNGNTITYN*
Ga0160423_111956862	3300012920	Surface Seawater	MPTKKPDTTTETPDTDVAKAIVSELGVNDTPAPSEPKVVKTKN
Ga0163110_100812541	3300012928	Surface Seawater	MPTKKPEENKTPKDDTAKAVVSKLGVNDEPKKTGPRVVETKNGRTMTY
Ga0163110_102179831	3300012928	Surface Seawater	MPSKKPDLQPETEPAKAVVSKLGINDEPTPTEPRVVETKNGRTITYN*
Ga0163110_112198862	3300012928	Surface Seawater	MSTKKNDETKTPETEVAKAIVSELGVNDEPTPSEPKVVRTKNGNTITYN*
Ga0163110_113512972	3300012928	Surface Seawater	MPSKKPNPKPETEPAKAVVSKLGINDEPVPYEPKVVKTKNGNTITFN*
Ga0163180_100517892	3300012952	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDEPVVGKPTIVKTKNGNTITNN*
Ga0163180_104841041	3300012952	Seawater	MPTKKPNPKTDTTDTAKAVVSRLGVNDEPVVGKPT
Ga0163179_100190482	3300012953	Seawater	MPTKKPDPTPETEVAKAIVSELGVNDEPTPTEPKVVETKNGNTITYN*
Ga0163179_109242081	3300012953	Seawater	MPTKKPDPKTDTTDTAKAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN*
Ga0163179_112080682	3300012953	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNTITYN*
Ga0181387_10177582	3300017709	Seawater	MPNKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNTITYN
Ga0181403_11092832	3300017710	Seawater	MPSKKPDPKPETDTAKAVVSRLGINDEPPVSNQTKSVKTKNGNTITTN
Ga0181391_10017235	3300017713	Seawater	MPTKKPDPTPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0181390_10305672	3300017719	Seawater	MPTKKPDPKPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0181383_10112502	3300017720	Seawater	MPTKKPDPKPETEVAKAIVSELGVNDEPTATEPKVVETKNGNTITYN
Ga0181383_10374971	3300017720	Seawater	TTDTAKAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0181388_10465542	3300017724	Seawater	MPNKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNTITNN
Ga0181381_10119652	3300017726	Seawater	MPTKKPDPTPETEASKAVVSKLGVNDDPKPNQPKVVETKNGRTMTYN
Ga0181381_10806822	3300017726	Seawater	MPNKKPDPKPETDTSKAVVSRLGVNDDPIPTEPKIVKTKNGNTITYN
Ga0181417_10061702	3300017730	Seawater	MPSKKPDSKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITNN
Ga0181416_100016118	3300017731	Seawater	DPKPETDTAKAVVSRLGINDEPPVSNQTKSVKTKNGNTITTN
Ga0187218_10546491	3300017737	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDEPVVGKPTIVKTKN
Ga0181433_10358531	3300017739	Seawater	SKKPDPKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITNN
Ga0181433_10665822	3300017739	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDEPVVGKPTIVKTKNGNTIT
Ga0181393_10353472	3300017748	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDEPVVGKPTIVKTKNGNTITTN
Ga0181405_10780791	3300017750	Seawater	TTDTANAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0181411_10652282	3300017755	Seawater	MPAKNPNPKTDTTDTANAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0181411_11141732	3300017755	Seawater	MPTKKPDPKPETDTSKAVVSRLGVNDEPVVGKPTIVKTKNGNTITTN
Ga0181382_11318222	3300017756	Seawater	MPSKKPNPKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITN
Ga0181382_11801682	3300017756	Seawater	MPTKKPDPTPETEVAKAIVSELGVNHEPTPTEPKVVRTKNGNTITYN
Ga0181414_11132511	3300017759	Seawater	MPSKKPDPKPETDTSKAVVSRLGVNDEPVVGKPTIVKTKNGNTITNN
Ga0181408_10084965	3300017760	Seawater	MPTKKPDPKTDTTDTANAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0181385_10304522	3300017764	Seawater	MPTKKLDPKTDTTDTANAVVSRLGVNDPNPTSSKAGSVKTKNGNTITTN
Ga0187220_11899222	3300017768	Seawater	MPSKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNTIT
Ga0187221_10588894	3300017769	Seawater	PDPKPETDTAKAVVSRLGINDEPPVSNQTKSVKTKNGNTITTN
Ga0187221_10727962	3300017769	Seawater	MPSKKPDPKPETDTSKAVVSRLGVNDEPAPTEPKVVKTKNGNTITYN
Ga0181430_10299237	3300017772	Seawater	KKSDPKSKTPDTEPAKAIVSKLGVNDEPTPTKPTVVETKNGNTITYN
Ga0181430_11405262	3300017772	Seawater	MPSKKPDPKPETDTSKAVVSRLGVNDEPAPTEPRVVKTKNGNTITYN
Ga0181394_11699612	3300017776	Seawater	PETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITTN
Ga0181395_10321162	3300017779	Seawater	MPSKKPDPKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITN
Ga0211711_10276152	3300020245	Marine	MMPTKKNNETKTPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0211707_10051002	3300020246	Marine	MPTKKPDTTTETPDTDVAKAIVSELGVNDTPAPSEPKVVKTKNGNTMTFN
Ga0211629_10455992	3300020273	Marine	MPTKKPDQPKTDTAKAVVSKLGVNDQPKKTSPRVVETKNGRTMTYN
Ga0211606_10412792	3300020278	Marine	MSTKKNDETKTPETEVAKAIVSELGVNDEPTPSEPKVVRTKNGNTITYN
Ga0211616_10021983	3300020306	Marine	MPSKKPDPKPETEPAKAVVSQLGINDEPTPTEPRVVETKNGRTMTYN
Ga0211616_10200062	3300020306	Marine	MPTKKPEDNKAPETEVAKAVVSKLGVNDEPKKTSPKVVETKNGRTMTYN
Ga0211605_11040962	3300020339	Marine	MPTKKNEETKTPETEVAKAIVSELGVNDEPTPSEPKVVRTKNGNTITYN
Ga0211599_11431362	3300020350	Marine	MPTKKPEENKTPKTDTAKAVVSKLGVNDQPKKTSPRVVETKNGRTMTYN
Ga0211712_100086163	3300020360	Marine	MMPTKKNDETKTPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0211647_100131925	3300020377	Marine	MMPTKKNDETKTPETEVAKAVVSELGVNDNPAPNKPRVVETKNGRTITYN
Ga0211666_102652791	3300020392	Marine	STKTSKPDTAKAVVSKLGVNDQPNPTEPKVVQTKNGRTLTYS
Ga0211666_103192872	3300020392	Marine	MPTKKPEENKTPENDTAKAVVSKLGVNDEPKKTGPRVVETKNGRTMTYN
Ga0211618_101806872	3300020393	Marine	MPSKKPDPKPETEPAKAIVSKLGINDEPTPTKPRVVETKNGRTMTYN
Ga0211497_100602893	3300020394	Marine	MPTKKSNSKSEPTKAVVSKLGVNDEPTPTKPKVVETKNGRTMTFN
Ga0211617_100420017	3300020401	Marine	MPNKKSSTKTSNPDTAKAVVSKLGVNDEPTSYEPKVVKTKNGRTITLN
Ga0211587_102073142	3300020411	Marine	MPTKKPNPAPKAPETEPAKAVVSKLGVNDEPKATGPRVVETKNGRTMTYN
Ga0211580_102845542	3300020420	Marine	MPTKKPDPTPETKPAKAVVSKLGINDEPAPYEPKVVETKNGRTMTYN
Ga0211702_102925792	3300020422	Marine	MPTKKPNSKTETPDTEPAKAIVSKLGVNDVPTPIEPKVVKTKNGNTMTFN
Ga0211521_1000059125	3300020428	Marine	MPSKKPDTKPETDTSKAVVSRLGVNDEPVPTKPKVVKTKNGNTITYN
Ga0211622_103461262	3300020430	Marine	MPSKKPDQPKTDTAKAVVSKLGVNDNPAPKKPRVVQTKNGRTMTYN
Ga0211565_100706402	3300020433	Marine	MPSKKPDLQPETEPAKAVVSKLGINDEPTPTEPRVVETKNGRTITYN
Ga0211708_100201563	3300020436	Marine	MHKHNNYRSNLMPTKKPDTTTETPDTDVAKAIVSELGVNDTPAPSEPKVVKTKNGNTMTF
Ga0211576_101017573	3300020438	Marine	MPTKKSDPKSKTPDTEPAKAIVSKLGVNDEPTPTKPTVVETKNGNTITYN
Ga0211695_101022132	3300020441	Marine	MPTKKPDPKTDTTDTANAVVSRLGVNDPNPTSSKAGSVKTKNGNTITTN
Ga0211574_1000018424	3300020446	Marine	MPTKKPEENKTPESEVAKAVVSKLGVNDEPKKTGPRVVETKNGRTMTYN
Ga0211574_104241922	3300020446	Marine	MPTKKNDETKTPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0211641_103717172	3300020450	Marine	MPAKKNEETKTPETEVAKAVVSELGVNDNPEPNKPRVVETKNGRTMTYN
Ga0211676_100006208	3300020463	Marine	MPTKKPDQPKTDTAKAVVSQLGVNDNPKPTQPKVVETKNGRTITYN
Ga0211713_106645632	3300020467	Marine	MPTKKPDTETKTPEPDTAKAVVSKLGVNDEPKTTEPKVVETKNGRTMTYN
Ga0211475_103583802	3300020468	Marine	MPSKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNT
Ga0211577_100326965	3300020469	Marine	MPSKKPNPKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITNN
Ga0211577_100645743	3300020469	Marine	MPAKNPNPKTDTTDTAKAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0224897_1004192	3300022046	Seawater	MPSKKPDPKPETDTAKAVVSRLGINDEPVVGKPTIVKTKNGNTITNN
Ga0224906_10052187	3300022074	Seawater	MPNKKPDPKPETDTSKAVVSRLGVNDDPVPTEPKIVKTKNGNTITYN
Ga0224906_10127335	3300022074	Seawater	MPTKKPDPKSKTPDTEPAKAIVSKLGVNDEPTPTKPTVVETKNGNTITYN
Ga0224906_10530022	3300022074	Seawater	MPTKKPDPTPETEAAKAVVSKLGVNDNPKPTGPKVVETKNGRTMTYN
Ga0224906_10713522	3300022074	Seawater	MPTKKNEETKTPETEPAKAVVSKLGVNDEPTSYEPKVVKTKNGNTITLN
Ga0208157_10024002	3300025086	Marine	MPTKKNDSTPETEAAKAVVSKLGVNDNPKPTSPKVVETKNGRTMTYN
Ga0208159_10055076	3300025101	Marine	MPTKKSDSKSEPTKAVVSKLGVNDEPTATESKVVKTKNGNTITFN
Ga0208159_10262282	3300025101	Marine	MPTKKNNSTPETEAAKAVVSKLGVNDDPKPTSPKVVETKNGRTMTYN
Ga0208666_10079175	3300025102	Marine	MPTKKSSTKTQKPDTAKAVISKLGVNDQPNPTEPKVVQTKNGRTLTYS
Ga0209348_10070305	3300025127	Marine	MHKHNNYRSNLMPTKKPNKTTETPDTDVAKAIVSELGVNDTPAPYEPKVVKTKNGNTIIF
Ga0209348_10102745	3300025127	Marine	MPTKKPDPKTETPKTEVAKAVVSKLGVNDEPTPTEPKVVKTKNGNTMTFN
Ga0209348_10369202	3300025127	Marine	MPTKKSDTETKKAETEPAKAVVSKLGVNDEPAPYKPKVVETKNGRTMTYN
Ga0209348_10528492	3300025127	Marine	MPTKKPDPTPETEPAKAVVSKLGINDEPTPTKPKVVETKNGRTMTYN
Ga0209232_10091166	3300025132	Marine	MPTKKPDPKIETTDTAKAVVSRLGENDPNPTSSKAGSVKTKNGNTITTN
Ga0209232_10150376	3300025132	Marine	MPTKKPDPKPETDTSKAVVSRLGVNDDPVSTEPKIVKTKNGNTITYN
Ga0209232_10436162	3300025132	Marine	MPTKKPDPKPETDTSKAVVSRLGVNDEPVVGKPTIVKTKNGNTITNN
Ga0209645_10014964	3300025151	Marine	MPSKKPDPKPKTEPAKAIVSQLGINDEPTPTEPKVVETKNGRTMTYN
Ga0208815_10079104	3300026134	Marine Oceanic	MPTKKPDPKTETPNTEPAKAVVSRLGVNDPNPTSDKACSVKTKNGNTITTN
Ga0208815_10110262	3300026134	Marine Oceanic	MPTKKPKSTPETDTAKAVVSKLGVNDEPKKTGPRVVETKNGRTMTYS
Ga0209503_1000511211	3300027859	Marine	MPTKKPDPTPETEAAKAVVSKLGVNDDPKPNQPKVVETKNGRTMTYN
Ga0209404_109241032	3300027906	Marine	MPTKKPNSEPKTPETEPAKAVVSKLGVNDEPKATGPRVVETKNGRTMTYN
Ga0183683_10001459	3300029309	Marine	MPTKKPQTEKTDTAKAVVSELGVNEENPVPEKKGDVKTKNGNTITYN
Ga0183683_10081542	3300029309	Marine	MSTKKNDETKTPETEVAKAIVSELGVNDEPTPTEPKVVRTKNGNTITYN
Ga0183683_10179732	3300029309	Marine	MPNKKPDQPKADEAKAVVSKLGVNDNPAPNKPRVVETKNGRTMTYN
Ga0183683_10366382	3300029309	Marine	MPSKKPDQPKTDEAKAVVSKLGVNDNPAPNKPRVVETKNGRTITYN
Ga0183683_10421222	3300029309	Marine	MPTKKNEETKTPETEVAKAVVSELGVNDNPEPNKPRVVETKNGRTMTYN
Ga0183683_10456242	3300029309	Marine	MPTKKSSTKTSKPDTAKAVVSKLGINDEPAPYEPKVVKTKNGRTITLN
Ga0183748_10088085	3300029319	Marine	MPTKKPNKTKETPDTDVAKAIVSELGVNDTPAPYEPKVVKTKNGNTIIFN
Ga0183757_100061315	3300029787	Marine	MPSKKPDPKPETDTSKAVVSRLGINDDPAPTEPKIVKTKNGNTITYN
Ga0183757_10040323	3300029787	Marine	MPKPNNYRSNLMPSKKPNPSTQTDTAKAVVSELGVNDNPAPTEPRVVKTKNGNTLTYN
Ga0183826_10112352	3300029792	Marine	MPSKKPEETKTPETEPAKAVVSKLGINDEPTPTEPRVVETKNGRTMTYN
Ga0183826_10272132	3300029792	Marine	MPTKKPETPNTEPTKAVVSKLGVSDEPTKTEPKVVKTKNGNTMTFN
Ga0315331_100164044	3300031774	Seawater	MPTKKPDPKPETEVAKAIVSELGVNDEPTPTEPKVVETKNGNTITYN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055658

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences