Metagenome / Metatranscriptome Family F055642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055642
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	41 residues
Representative Sequence	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDAQG
Number of Associated Samples	118
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.59 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	85.51 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.638 % of family members)
Environment Ontology (ENVO)	Unclassified (46.377 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.12% β-sheet: 23.53% Coil/Unstructured: 57.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01661	Macro	31.88
PF04389	Peptidase_M28	4.35
PF00144	Beta-lactamase	3.62
PF00557	Peptidase_M24	2.90
PF12706	Lactamase_B_2	2.90
PF00300	His_Phos_1	2.90
PF00069	Pkinase	2.90
PF12833	HTH_18	2.17
PF07705	CARDB	2.17
PF01321	Creatinase_N	2.17
PF11954	DUF3471	1.45
PF00313	CSD	0.72
PF01344	Kelch_1	0.72
PF00753	Lactamase_B	0.72
PF00015	MCPsignal	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	31.88
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.59
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.62
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.62
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.62
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	2.17
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.26 %
Unclassified	root	N/A	21.01 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	55.80 %
Unclassified	root	N/A	21.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.17 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	55.80 %
Unclassified	root	N/A	21.01 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	20.29 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.07 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.29 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.07 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.29 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.07 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.29 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.62 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.29 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.62 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.29 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.62 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ01D5DQ6	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300002561\|JGI25384J37096_10050187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1587	Open in IMG/M
3300002907\|JGI25613J43889_10133565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300002908\|JGI25382J43887_10040682	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300002908\|JGI25382J43887_10223174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	888	Open in IMG/M
3300002908\|JGI25382J43887_10387560	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005180\|Ga0066685_10571915	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005180\|Ga0066685_11017502	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005439\|Ga0070711_101780109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	540	Open in IMG/M
3300005444\|Ga0070694_101112317	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005450\|Ga0066682_10099781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1822	Open in IMG/M
3300005451\|Ga0066681_10221251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1139	Open in IMG/M
3300005518\|Ga0070699_100664400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	951	Open in IMG/M
3300005556\|Ga0066707_10821575	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005557\|Ga0066704_10653729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	668	Open in IMG/M
3300005560\|Ga0066670_10921240	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005586\|Ga0066691_10328807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	904	Open in IMG/M
3300005877\|Ga0075296_1032778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	505	Open in IMG/M
3300006046\|Ga0066652_100301887	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300006755\|Ga0079222_10026830	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300006791\|Ga0066653_10739688	Not Available	512	Open in IMG/M
3300006794\|Ga0066658_10017451	All Organisms → cellular organisms → Bacteria	2753	Open in IMG/M
3300006797\|Ga0066659_10836366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	765	Open in IMG/M
3300006844\|Ga0075428_100277085	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300007004\|Ga0079218_13065320	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009012\|Ga0066710_103561141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300009162\|Ga0075423_10058049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3999	Open in IMG/M
3300009792\|Ga0126374_10221056	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300010136\|Ga0127447_1042416	Not Available	555	Open in IMG/M
3300010304\|Ga0134088_10005899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5111	Open in IMG/M
3300010323\|Ga0134086_10027165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1865	Open in IMG/M
3300010325\|Ga0134064_10063351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1155	Open in IMG/M
3300010326\|Ga0134065_10239093	Not Available	673	Open in IMG/M
3300010333\|Ga0134080_10091489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1242	Open in IMG/M
3300010333\|Ga0134080_10221756	Not Available	826	Open in IMG/M
3300010333\|Ga0134080_10423684	Not Available	619	Open in IMG/M
3300010335\|Ga0134063_10319759	Not Available	749	Open in IMG/M
3300010336\|Ga0134071_10084632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1489	Open in IMG/M
3300010336\|Ga0134071_10526646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300010337\|Ga0134062_10596389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	568	Open in IMG/M
3300010364\|Ga0134066_10011201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1812	Open in IMG/M
3300010364\|Ga0134066_10122734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	783	Open in IMG/M
3300010373\|Ga0134128_12405221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300011269\|Ga0137392_10427042	Not Available	1100	Open in IMG/M
3300011271\|Ga0137393_10224781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1589	Open in IMG/M
3300011417\|Ga0137326_1003382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4096	Open in IMG/M
3300012096\|Ga0137389_10387864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1192	Open in IMG/M
3300012203\|Ga0137399_10202229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1613	Open in IMG/M
3300012203\|Ga0137399_10497043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1023	Open in IMG/M
3300012203\|Ga0137399_11744527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300012206\|Ga0137380_11583704	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012207\|Ga0137381_10205616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1707	Open in IMG/M
3300012209\|Ga0137379_11526929	Not Available	568	Open in IMG/M
3300012210\|Ga0137378_10089909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2807	Open in IMG/M
3300012210\|Ga0137378_11177684	Not Available	682	Open in IMG/M
3300012349\|Ga0137387_11263161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300012353\|Ga0137367_10753229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	677	Open in IMG/M
3300012354\|Ga0137366_10017466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5617	Open in IMG/M
3300012355\|Ga0137369_10236403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1390	Open in IMG/M
3300012359\|Ga0137385_11463503	Not Available	547	Open in IMG/M
3300012360\|Ga0137375_10057782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4180	Open in IMG/M
3300012362\|Ga0137361_11176954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300012363\|Ga0137390_10919805	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012380\|Ga0134047_1232568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1181	Open in IMG/M
3300012403\|Ga0134049_1289910	Not Available	713	Open in IMG/M
3300012582\|Ga0137358_10231322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1259	Open in IMG/M
3300012683\|Ga0137398_10255822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1167	Open in IMG/M
3300012685\|Ga0137397_10278478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1246	Open in IMG/M
3300012917\|Ga0137395_10572294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300012918\|Ga0137396_10407560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1008	Open in IMG/M
3300012922\|Ga0137394_10155269	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1948	Open in IMG/M
3300012922\|Ga0137394_10497009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1036	Open in IMG/M
3300012922\|Ga0137394_11240584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300012930\|Ga0137407_10441137	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300012972\|Ga0134077_10400441	Not Available	593	Open in IMG/M
3300012975\|Ga0134110_10248895	Not Available	756	Open in IMG/M
3300012977\|Ga0134087_10764264	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
3300014154\|Ga0134075_10031556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2154	Open in IMG/M
3300014154\|Ga0134075_10108725	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300014154\|Ga0134075_10412605	Not Available	597	Open in IMG/M
3300015200\|Ga0173480_11016449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300015245\|Ga0137409_10231178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1651	Open in IMG/M
3300015245\|Ga0137409_10845298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	750	Open in IMG/M
3300015357\|Ga0134072_10021299	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1619	Open in IMG/M
3300015358\|Ga0134089_10084885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1197	Open in IMG/M
3300015359\|Ga0134085_10607380	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300015371\|Ga0132258_10026820	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	12758	Open in IMG/M
3300015372\|Ga0132256_101522270	Not Available	779	Open in IMG/M
3300015373\|Ga0132257_100000542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	29401	Open in IMG/M
3300017656\|Ga0134112_10012434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2832	Open in IMG/M
3300017656\|Ga0134112_10254430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	698	Open in IMG/M
3300017659\|Ga0134083_10500069	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018054\|Ga0184621_10021207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2000	Open in IMG/M
3300018063\|Ga0184637_10120574	Not Available	1617	Open in IMG/M
3300018074\|Ga0184640_10429136	Not Available	591	Open in IMG/M
3300018077\|Ga0184633_10443361	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300018078\|Ga0184612_10166976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1149	Open in IMG/M
3300018468\|Ga0066662_12180621	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300019255\|Ga0184643_1365589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4424	Open in IMG/M
3300020010\|Ga0193749_1037696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	935	Open in IMG/M
3300020015\|Ga0193734_1046912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	798	Open in IMG/M
3300021073\|Ga0210378_10329342	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300021086\|Ga0179596_10629078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300022694\|Ga0222623_10019207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2546	Open in IMG/M
3300024310\|Ga0247681_1058310	Not Available	599	Open in IMG/M
3300024330\|Ga0137417_1189407	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1130	Open in IMG/M
3300025558\|Ga0210139_1113746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	555	Open in IMG/M
3300026298\|Ga0209236_1301233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	518	Open in IMG/M
3300026301\|Ga0209238_1269536	Not Available	510	Open in IMG/M
3300026307\|Ga0209469_1102330	Not Available	782	Open in IMG/M
3300026307\|Ga0209469_1150048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	514	Open in IMG/M
3300026310\|Ga0209239_1104978	Not Available	1193	Open in IMG/M
3300026313\|Ga0209761_1021963	All Organisms → cellular organisms → Bacteria	3976	Open in IMG/M
3300026325\|Ga0209152_10169171	Not Available	822	Open in IMG/M
3300026331\|Ga0209267_1016801	All Organisms → cellular organisms → Bacteria	3763	Open in IMG/M
3300026331\|Ga0209267_1221532	Not Available	703	Open in IMG/M
3300026333\|Ga0209158_1032480	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300026333\|Ga0209158_1138136	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300026334\|Ga0209377_1058117	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1702	Open in IMG/M
3300026343\|Ga0209159_1159746	Not Available	854	Open in IMG/M
3300026528\|Ga0209378_1117763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1146	Open in IMG/M
3300026542\|Ga0209805_1109106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1315	Open in IMG/M
3300026548\|Ga0209161_10305188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300027882\|Ga0209590_10602713	Not Available	706	Open in IMG/M
3300027882\|Ga0209590_10878840	Not Available	565	Open in IMG/M
3300027950\|Ga0209885_1034417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300028711\|Ga0307293_10070880	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300028791\|Ga0307290_10339496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300028828\|Ga0307312_10617503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	717	Open in IMG/M
3300031226\|Ga0307497_10394782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300031716\|Ga0310813_11215034	Not Available	694	Open in IMG/M
3300031720\|Ga0307469_10993092	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300031820\|Ga0307473_11020804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	605	Open in IMG/M
3300032180\|Ga0307471_101011013	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300032205\|Ga0307472_101098648	Not Available	752	Open in IMG/M
3300033407\|Ga0214472_11345956	Not Available	616	Open in IMG/M
3300033417\|Ga0214471_10064136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3007	Open in IMG/M
3300033500\|Ga0326730_1021634	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.13%
Aquatic	Environmental → Aquatic	7.25%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.41%
Sediment	Environmental → Aquatic → Sediment	5.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%
Marine	Environmental → Aquatic → Marine	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.07%
Loam	Environmental → Terrestrial → Soil → Loam	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005877	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_06020960	2170459024	Grass Soil	VARDLIGRVREALGARYNVITSVGRGGNATLFGAYDQQGQKVAI
JGI25384J37096_100501872	3300002561	Grasslands Soil	VARDLIGRVRQALGDRYTVITAVGRGGNAMLYGAFDKDGRK
JGI25613J43889_101335651	3300002907	Grasslands Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGALDKDGRK
JGI25382J43887_100406821	3300002908	Grasslands Soil	VAGRDLIERVRKALGDRYNVITAVGRGGTAAIFGAYDAAGRKVAIKVL
JGI25382J43887_102231742	3300002908	Grasslands Soil	MSTRDLIERVRKALGDRYNVITAVGRGGNACIFGAYDQAGQM*
JGI25382J43887_103875603	3300002908	Grasslands Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAHDPSGHQVAIK
Ga0066685_105719151	3300005180	Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAHDASGH
Ga0066685_110175021	3300005180	Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAHDPSG
Ga0070711_1017801092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPGRDLIERVRNALRDRYSVIAAVGRGGNASIFAGRDPSG
Ga0070694_1011123172	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MARDLIGRVRQALGDRYNVITQVGRGGNATLYGAYDKEGRKVA
Ga0066682_100997812	3300005450	Soil	MAGRDILDRVRKALGDHYDVITAVGRGGAASIFGAYDKSGQRVAI
Ga0066681_102212511	3300005451	Soil	MARPEILDRVRKALGDRYDVITAVGRGGTASIFGAYDKSG
Ga0070699_1006644001	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MARDLIGRVRQALGDRYNVITAVGRGGNATLYGAFDKDGRK
Ga0066707_108215751	3300005556	Soil	MPGRDLIERVRKALGDRYTVLAAVGRGGNASIFAGRDPT
Ga0066704_106537292	3300005557	Soil	VAGRDLIERVRKALGDRYNVITAVGRGGTAAIFGAYDAAGRKVAI
Ga0066670_109212402	3300005560	Soil	MSSHDLIERVRKALADRYTVITAVGRGGNASIFGAYDQA
Ga0066691_103288071	3300005586	Soil	MARPEILDRVRKALGNRYDVITAVGRGGTASIFGAYDKS
Ga0075296_10327782	3300005877	Rice Paddy Soil	MPRRDLIERVRKALGDRYEIVTAVGRGGNASIFGAFDKARNR
Ga0066652_1003018874	3300006046	Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAH
Ga0079222_100268305	3300006755	Agricultural Soil	MPGRDLIDRVRKALEDRYTDITPVGRGGNASIFGAHRADGT
Ga0066653_107396881	3300006791	Soil	MPGRDLIERVRKALGDRYTVVTAAGRGGNASIFAGLDVAGEKVA
Ga0066658_100174515	3300006794	Soil	MPGRDLIERVRKALRDRYSVTAAVGRGGNACIFSGRDASGADVAI
Ga0066659_108363661	3300006797	Soil	MGRQDLIERVRKALGDRYTVITAVGRGGNASIFGAYDRAGQRVAIK
Ga0075428_1002770851	3300006844	Populus Rhizosphere	MARLDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKSG
Ga0079218_130653202	3300007004	Agricultural Soil	MTGRDLLSRIKAALGDRYTVVATVGRGGNAMVYGAYDRTGHKVA
Ga0066710_1035611411	3300009012	Grasslands Soil	LRSGTAYCGAVARDLIGRVRQALGDRYTVITAVGRGGNATPYGAFDKDGRRVAITVL
Ga0075423_100580494	3300009162	Populus Rhizosphere	MARELIGRIQKALGDRYTVITAVGRGGNASIFGAFDQRGEKV
Ga0126374_102210562	3300009792	Tropical Forest Soil	MPRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKAGNRVAS*
Ga0127447_10424161	3300010136	Grasslands Soil	VRELLGTRYTAITAVARGGNATLFGAYDQQGQQVA
Ga0134088_100058994	3300010304	Grasslands Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDRDGR
Ga0134086_100271651	3300010323	Grasslands Soil	MPSRDLIERVRKALGDRYTVITAVGRGGNACIFGAYDQVGQ
Ga0134064_100633512	3300010325	Grasslands Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGALDKD
Ga0134065_102390931	3300010326	Grasslands Soil	MPGRDLIERVRRALGDRYTVLAAVGRGGNASIFAARDSS
Ga0134080_100914891	3300010333	Grasslands Soil	MPSRDLIERVRKALGDRYTVITAVGRGGNASIFGAYDQAGQRVAIKV
Ga0134080_102217562	3300010333	Grasslands Soil	MAGRDLIERVRKALGDRYTVLTAVGRGGNASIFAG
Ga0134080_104236841	3300010333	Grasslands Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGR
Ga0134063_103197592	3300010335	Grasslands Soil	MPGRDLIERVRKALGDRYTVLAAVGRGGNASIFAGRDPTGAQVAI
Ga0134071_100846323	3300010336	Grasslands Soil	MPRRDLIERVRKALGDRYTVLNAVGRGGNASIFAGQDH
Ga0134071_105266461	3300010336	Grasslands Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDRDGRKVA
Ga0134062_105963891	3300010337	Grasslands Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDARGQKVAIK
Ga0134066_100112014	3300010364	Grasslands Soil	MPRRDLIERVRKALGDRYTVLNAVGRGGNASIFAGQDHSGTFVAIK
Ga0134066_101227341	3300010364	Grasslands Soil	MPGRDLIERVRKALRDRYSVIAAVGRGGNACIFSGRDASGADVAIK
Ga0134128_124052212	3300010373	Terrestrial Soil	MARELIGRIQKALGDRYTVITEVGRGGNATLYGAYDRDGRKVAI
Ga0137392_104270422	3300011269	Vadose Zone Soil	VARDLIGRVRQALGARYTIITAVGRGGNATLYGAFDKDGRKVAIKVL
Ga0137393_102247814	3300011271	Vadose Zone Soil	MPARDLIERVRKALGDRYTVLSAVGRGGNASIFAAK
Ga0137326_10033823	3300011417	Soil	VARDLIERVRKALGDRYTVITAIGRGGNATLFGAFDPQAKKVAIKV
Ga0137389_103878641	3300012096	Vadose Zone Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAF
Ga0137399_102022292	3300012203	Vadose Zone Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDPQGQKVAI
Ga0137399_104970432	3300012203	Vadose Zone Soil	MARDLIGRVRQALGDRYTAITPVGRGGNATLFGAFDKDGR
Ga0137399_117445272	3300012203	Vadose Zone Soil	MARDLIGRVRQALGDRYTAITPVGRGGNATLFGAFDKDGRRVAIKV
Ga0137380_115837041	3300012206	Vadose Zone Soil	LIGRVREALGARYTVITEVGRGGNATLYGAYDRDGRK
Ga0137381_102056161	3300012207	Vadose Zone Soil	MTRDLIGRVRQALGDRYTVITAVGRGGNATLFGAF
Ga0137379_115269291	3300012209	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGRDPTGAQ
Ga0137378_100899093	3300012210	Vadose Zone Soil	MTRDLIGRVREALGARYTVITEVGRGGNATLYGAYDRDGRKVAIKVLH
Ga0137378_111776841	3300012210	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAG
Ga0137387_112631612	3300012349	Vadose Zone Soil	LIGRVRQALGDRYTVITAVGRGGNAMLYGAFDKDGRKV
Ga0137367_107532291	3300012353	Vadose Zone Soil	MARELIGRVREALGDRYTVITEVGRGGNATLFGAFDKDGRKVA
Ga0137366_100174664	3300012354	Vadose Zone Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDRD
Ga0137369_102364031	3300012355	Vadose Zone Soil	VVLAHDLIERVRKALGDRYTVITAVGRGGNATLFGAYDPQGQRVVGAEQR
Ga0137385_114635032	3300012359	Vadose Zone Soil	MAGRDLIERVRKALGSRYTDITPVGRGGNASIFGAHLPDGAD
Ga0137375_100577821	3300012360	Vadose Zone Soil	MSRDLIGRVRQALGDRYTVITAVGRGGNATLFGAFDKDGQ
Ga0137361_111769541	3300012362	Vadose Zone Soil	VARDLIGRVRQALGDRYTVITAVGRGGNATLYGAFDKDGRR
Ga0137390_109198052	3300012363	Vadose Zone Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDKDGR
Ga0134047_12325682	3300012380	Grasslands Soil	MTRDLIGRVRQALGGRYTVITAVGGGGNATLFGAFDKDGQRVAI
Ga0134049_12899101	3300012403	Grasslands Soil	MPGRDLIERVRKALGDRYTVLTAVCRGGNASIFAGPDPT
Ga0137358_102313221	3300012582	Vadose Zone Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDKDGRKVAIKVL
Ga0137398_102558222	3300012683	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLSAVGRGGNASIFSGRDPSGA
Ga0137397_102784781	3300012685	Vadose Zone Soil	MARDLIGRVCKALGDRYTAITPVGRGGNATLFGAFDKDGRRVAIKVL
Ga0137395_105722941	3300012917	Vadose Zone Soil	MMQRDLLARVRQLLGDRYTAITAVGRGGNASIFGAQEASGRQVAIKV
Ga0137396_104075602	3300012918	Vadose Zone Soil	MTGRDLIERVRKALGDRYTVLTAVGRGGNASIFAAKD
Ga0137394_101552694	3300012922	Vadose Zone Soil	MPARDLIERVRKALGDRYTVLAAVGRGGNASIFAAKD
Ga0137394_104970092	3300012922	Vadose Zone Soil	MARDLIGRVRQALGDRYTAITPVGRGGNATLFGAF
Ga0137394_112405841	3300012922	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLAAVGRGGNASIFAAKDSSG
Ga0137407_104411373	3300012930	Vadose Zone Soil	MPARDLIERVRKALGDRYTVLAAVGRGGNASIFAA
Ga0134077_104004412	3300012972	Grasslands Soil	MAGRDLIERVRKALGSRYTDITPVGRGGNASIFGAHLP
Ga0134110_102488951	3300012975	Grasslands Soil	MPTRDLIERVRKALGDRYTVITAVGRGGNACIFGAYDQAGQKVAI
Ga0134087_107642642	3300012977	Grasslands Soil	MSSHDLIERVRKALGDRYTVITAVGRGGNASIFGAYDQS
Ga0134075_100315565	3300014154	Grasslands Soil	MPGRELIERVREALRDRYTVISAIGRGGNAAIFGA
Ga0134075_101087251	3300014154	Grasslands Soil	MPGRDLIERVRQALGDRYTAITAVGRGGNASIFRAYDDAGADVAIKV
Ga0134075_104126052	3300014154	Grasslands Soil	MARPEILDRVRKALGDRYQVITAVGRGGNASIFGAYDSGGQ
Ga0173480_110164492	3300015200	Soil	VARDLIKRVQEALGARYHVITAIGRGGNATLFGAFDPQGGKVAIKVLHPE
Ga0137409_102311782	3300015245	Vadose Zone Soil	MARDLIGRLRQALGDRYNVITAVGRGGNATLYGAFDKDGRRVAI
Ga0137409_108452981	3300015245	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLAAVGRGGNASIFAAKDSSGA
Ga0134072_100212991	3300015357	Grasslands Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNASIFGAYDQAGQRVAIKV
Ga0134089_100848851	3300015358	Grasslands Soil	VARDLIGRVRQALGDRYNVITEVGRGGNATLYGAFDKDQR
Ga0134085_106073801	3300015359	Grasslands Soil	MAGRDILDRVRKALGDHYDVITAVGRGGAASIFGA
Ga0132258_1002682011	3300015371	Arabidopsis Rhizosphere	MARELINRVRQALSERYNVITEVARGGNATLYGALDKEGHKVAIKVL
Ga0132256_1015222701	3300015372	Arabidopsis Rhizosphere	LPRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKAGNR
Ga0132257_10000054227	3300015373	Arabidopsis Rhizosphere	MARELINRVRQALSERYNVITEVARGGNATLYGALDKEGHKVAIKVLH
Ga0134112_100124341	3300017656	Grasslands Soil	MPARDLIERVRKALGDRYTVLNAVGRGGNASIFAAKDASGAH
Ga0134112_102544301	3300017656	Grasslands Soil	MPARDLIERVRKALGDRYTVLAAVGRGGNASIFAAKDSS
Ga0134083_105000691	3300017659	Grasslands Soil	MPGRDLIERVRQALGDRYTAITAVGRGGNASIFRAYDDAGADVAIK
Ga0184621_100212072	3300018054	Groundwater Sediment	MSSRDLIERVRKALGDRYTVITAVARGGNATLFGAFDAQGQKVAIKVL
Ga0184637_101205744	3300018063	Groundwater Sediment	MLRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDRAG
Ga0184640_104291362	3300018074	Groundwater Sediment	MLRRDLIERVRKALGDRYEVITAVGRGGNASIFGAF
Ga0184633_104433612	3300018077	Groundwater Sediment	VVLARDLIGRVRQALGDRYTVITAVGRGGNATLFGAFDKDNQKVAI
Ga0184612_101669761	3300018078	Groundwater Sediment	VREALGGRYNVITAVGRGGNATLFGALDAQGQKVAIK
Ga0066662_121806212	3300018468	Grasslands Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAHD
Ga0184643_13655891	3300019255	Groundwater Sediment	VVLAHDLIERVRKALGERYTVITAVGRGGNATLFGAYDPQ
Ga0193749_10376961	3300020010	Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDPQGQKVAIK
Ga0193734_10469121	3300020015	Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDPQGQ
Ga0210378_103293422	3300021073	Groundwater Sediment	VARDLLKRVQEALGARYNVITAVGRGGNATLFGAVDS
Ga0179596_106290781	3300021086	Vadose Zone Soil	VARDLIGRVRQALGDRYTVITAVGRGGNATLYGAYDKDGRQV
Ga0222623_100192072	3300022694	Groundwater Sediment	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGA
Ga0247681_10583102	3300024310	Soil	MPRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKAGNRV
Ga0137417_11894072	3300024330	Vadose Zone Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGALDKDGRKVA
Ga0210139_11137461	3300025558	Natural And Restored Wetlands	MPERELIDRVRKALGDRYTVITSIGRGGNACIFGAYDQSGQRVA
Ga0209236_13012332	3300026298	Grasslands Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAARDSSGTHVAI
Ga0209238_12695362	3300026301	Grasslands Soil	MTTRDLIERVRKALGDRYTVITAVGRGGNACIFGAYD
Ga0209469_11023302	3300026307	Soil	MPGRELIERVREALRDRYTVISAIGRGGNAAIFGAAD
Ga0209469_11500482	3300026307	Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAARD
Ga0209239_11049783	3300026310	Grasslands Soil	VPGRELIERVRQALGDRYTVITAVGRGGNASIFGAHDPSGH
Ga0209761_10219631	3300026313	Grasslands Soil	MPARDLIERVRKALGDRYTVLNAVGRGGNASIFAAKDAS
Ga0209152_101691711	3300026325	Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGRDPTGAQVAIKVL
Ga0209267_10168011	3300026331	Soil	MSTRDLIERVRKALGDRYNVITAVGRGGNACIFGAYDQAGQKVAIKV
Ga0209267_12215322	3300026331	Soil	MSGRDLIERVRKALRDRYSVIAAVGRGGNACIFAGRDTSGADVA
Ga0209158_10324801	3300026333	Soil	MPGRDLIERVRKALGDRYTVLAAVGRGGNASIFAGRDPTGA
Ga0209158_11381361	3300026333	Soil	MARPEILDRVRKALGDRYDVITAVGRGGTASIFGAYDK
Ga0209377_10581171	3300026334	Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAARDS
Ga0209159_11597463	3300026343	Soil	MAGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGRDPTGAQV
Ga0209378_11177634	3300026528	Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGRDPTGA
Ga0209805_11091061	3300026542	Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAA
Ga0209161_103051881	3300026548	Soil	MARELIGRVRQALGDRYNVITAVGRGGNATLYGAFDMDGRRVAI
Ga0209590_106027131	3300027882	Vadose Zone Soil	MPGRDLIERVRKALGDRYTVLSAVGRGGNASIFSGRDP
Ga0209590_108788401	3300027882	Vadose Zone Soil	MSSRDMIERVRKALGDRYTVITAVGRGGNASIFGA
Ga0209885_10344171	3300027950	Groundwater Sand	VARDLLKRVQEALGARYNVITAVGRGGNATLFGAFDSQGHK
Ga0307293_100708801	3300028711	Soil	VVLAHDLIERVRKALGDRYTVITAVGRGGNATLFGAFDPQGQRVA
Ga0307290_103394961	3300028791	Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDAQG
Ga0307312_106175031	3300028828	Soil	MSSRDLIERVRKALGDRYTVITAVGRGGNATLFGAFDPQGQRVAIKVL
Ga0307497_103947821	3300031226	Soil	MARELIGRVRQALASRYDVIKEVARGGNATLYGALDK
Ga0310813_112150342	3300031716	Soil	LPRRDLIDRVRKALGDRYEVITAVGRGGNASIVGAFDKAGNR
Ga0307469_109930923	3300031720	Hardwood Forest Soil	MPGRELIERVREALGGRYRVITAIGRGGNAAIFGASDEAGRPVAIKVL
Ga0307473_110208041	3300031820	Hardwood Forest Soil	MPRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKA
Ga0307471_1010110132	3300032180	Hardwood Forest Soil	MARLDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKSGNRVAIK
Ga0307472_1010986481	3300032205	Hardwood Forest Soil	MPGRDLIERVRKALGDRYTVLTAVGRGGNASIFAGRDPSG
Ga0214472_113459562	3300033407	Soil	MSRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDRAGNRVAIK
Ga0214471_100641363	3300033417	Soil	MAQDLIERVRAVLGHRYTVITAVGRGGNASIFGAFDRNGGKVAIKVLH
Ga0326730_10216343	3300033500	Peat Soil	MPRRDLIERVRKALGDRYEVITAVGRGGNASIFGAFDKDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences