Metagenome / Metatranscriptome Family F055610

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055610
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	75 residues
Representative Sequence	MTIAAFSLAGGAWIFLAFIVVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Number of Associated Samples	122
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.31 %
% of genes near scaffold ends (potentially truncated)	27.54 %
% of genes from short scaffolds (< 2000 bps)	87.68 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.507 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.942 % of family members)
Environment Ontology (ENVO)	Unclassified (36.232 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.14% β-sheet: 0.00% Coil/Unstructured: 56.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00270	DEAD	36.23
PF00156	Pribosyltran	5.07
PF00271	Helicase_C	4.35
PF04828	GFA	2.90
PF13522	GATase_6	2.90
PF00535	Glycos_transf_2	1.45
PF00579	tRNA-synt_1b	1.45
PF02769	AIRS_C	1.45
PF13537	GATase_7	1.45
PF16124	RecQ_Zn_bind	1.45
PF01522	Polysacc_deac_1	0.72
PF00551	Formyl_trans_N	0.72
PF07311	Dodecin	0.72
PF05961	Chordopox_A13L	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.90
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.45
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.45
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.43 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.36 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	44.93 %
Unclassified	root	N/A	14.49 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.77 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	26.09 %
Unclassified	root	N/A	14.49 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.77 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	12.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.49 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.77 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	12.32 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	6.52 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.49 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.77 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	12.32 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	2.90 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.49 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.77 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	12.32 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2.90 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.90 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1.45 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02IJKPE	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300000956\|JGI10216J12902_101394260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2288	Open in IMG/M
3300001537\|A2065W1_11053447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300001661\|JGI12053J15887_10123137	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1385	Open in IMG/M
3300002547\|JGI24973J35851_1002411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3742	Open in IMG/M
3300004479\|Ga0062595_100970992	Not Available	726	Open in IMG/M
3300005167\|Ga0066672_10154708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1440	Open in IMG/M
3300005167\|Ga0066672_10975639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	519	Open in IMG/M
3300005176\|Ga0066679_10973536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	530	Open in IMG/M
3300005177\|Ga0066690_10360318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300005179\|Ga0066684_10277878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1107	Open in IMG/M
3300005187\|Ga0066675_10314206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300005467\|Ga0070706_100941479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	797	Open in IMG/M
3300005471\|Ga0070698_101739942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	576	Open in IMG/M
3300005536\|Ga0070697_100729415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	875	Open in IMG/M
3300005553\|Ga0066695_10169952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1362	Open in IMG/M
3300005560\|Ga0066670_10258239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1056	Open in IMG/M
3300005576\|Ga0066708_11021223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300005587\|Ga0066654_10166772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1128	Open in IMG/M
3300005587\|Ga0066654_10370786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	779	Open in IMG/M
3300005719\|Ga0068861_101129905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300006031\|Ga0066651_10580585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	595	Open in IMG/M
3300006032\|Ga0066696_10349180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300006034\|Ga0066656_10564094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	739	Open in IMG/M
3300006046\|Ga0066652_100202424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1709	Open in IMG/M
3300006794\|Ga0066658_10111151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1319	Open in IMG/M
3300006800\|Ga0066660_10163656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300006800\|Ga0066660_11716366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006854\|Ga0075425_102356352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300006954\|Ga0079219_10510987	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300009088\|Ga0099830_10301362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1279	Open in IMG/M
3300009089\|Ga0099828_11566188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	580	Open in IMG/M
3300009090\|Ga0099827_10273394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1425	Open in IMG/M
3300009137\|Ga0066709_101808671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	857	Open in IMG/M
3300009147\|Ga0114129_11554475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300010039\|Ga0126309_10145040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1270	Open in IMG/M
3300010095\|Ga0127475_1076292	Not Available	664	Open in IMG/M
3300010117\|Ga0127449_1045634	Not Available	723	Open in IMG/M
3300010142\|Ga0127483_1279053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	905	Open in IMG/M
3300010166\|Ga0126306_10448498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1015	Open in IMG/M
3300010166\|Ga0126306_11404588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300010301\|Ga0134070_10431535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	524	Open in IMG/M
3300010303\|Ga0134082_10138741	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300010325\|Ga0134064_10214558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300010337\|Ga0134062_10461340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	632	Open in IMG/M
3300010857\|Ga0126354_1223783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	507	Open in IMG/M
3300010862\|Ga0126348_1053525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	546	Open in IMG/M
3300010905\|Ga0138112_1081759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	500	Open in IMG/M
3300011000\|Ga0138513_100021726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300012093\|Ga0136632_10454097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300012093\|Ga0136632_10500549	Not Available	540	Open in IMG/M
3300012186\|Ga0136620_10043106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2129	Open in IMG/M
3300012200\|Ga0137382_10683955	Not Available	735	Open in IMG/M
3300012208\|Ga0137376_10563134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	987	Open in IMG/M
3300012211\|Ga0137377_11192305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	691	Open in IMG/M
3300012212\|Ga0150985_112168470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	522	Open in IMG/M
3300012224\|Ga0134028_1047526	Not Available	651	Open in IMG/M
3300012285\|Ga0137370_10609523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300012356\|Ga0137371_10698777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	776	Open in IMG/M
3300012356\|Ga0137371_10741370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	750	Open in IMG/M
3300012356\|Ga0137371_10829120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	704	Open in IMG/M
3300012361\|Ga0137360_11529334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	572	Open in IMG/M
3300012363\|Ga0137390_10106901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2767	Open in IMG/M
3300012373\|Ga0134042_1186084	Not Available	551	Open in IMG/M
3300012375\|Ga0134034_1159948	Not Available	625	Open in IMG/M
3300012380\|Ga0134047_1218920	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300012392\|Ga0134043_1000756	Not Available	836	Open in IMG/M
3300012392\|Ga0134043_1138936	Not Available	569	Open in IMG/M
3300012400\|Ga0134048_1376044	Not Available	520	Open in IMG/M
3300012529\|Ga0136630_1123243	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012680\|Ga0136612_10003207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	7549	Open in IMG/M
3300012924\|Ga0137413_10791098	Not Available	728	Open in IMG/M
3300012924\|Ga0137413_11219825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	600	Open in IMG/M
3300012960\|Ga0164301_10702079	Not Available	761	Open in IMG/M
3300012961\|Ga0164302_10391787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	944	Open in IMG/M
3300012977\|Ga0134087_10313329	Not Available	739	Open in IMG/M
3300013501\|Ga0120154_1007710	All Organisms → cellular organisms → Bacteria	3104	Open in IMG/M
3300013763\|Ga0120179_1059069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300014150\|Ga0134081_10201438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300014166\|Ga0134079_10292061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300015158\|Ga0167622_1007839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2864	Open in IMG/M
3300015161\|Ga0167623_1026305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1397	Open in IMG/M
3300015241\|Ga0137418_10137680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2161	Open in IMG/M
3300015242\|Ga0137412_10032521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4257	Open in IMG/M
3300015245\|Ga0137409_11397003	Not Available	545	Open in IMG/M
3300015357\|Ga0134072_10275638	Not Available	617	Open in IMG/M
3300015371\|Ga0132258_12987365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300017695\|Ga0180121_10179199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300017787\|Ga0183260_10014088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6147	Open in IMG/M
3300017789\|Ga0136617_10007421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9785	Open in IMG/M
3300018054\|Ga0184621_10103231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1010	Open in IMG/M
3300018054\|Ga0184621_10136951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	880	Open in IMG/M
3300018073\|Ga0184624_10192544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300018465\|Ga0190269_11943508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300018468\|Ga0066662_10416212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1188	Open in IMG/M
3300018468\|Ga0066662_11130490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300018476\|Ga0190274_12682715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300018482\|Ga0066669_11759264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300020170\|Ga0179594_10374118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300021170\|Ga0210400_11663205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300022195\|Ga0222625_1656072	Not Available	512	Open in IMG/M
3300022756\|Ga0222622_11236364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300024288\|Ga0179589_10293733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	730	Open in IMG/M
3300026295\|Ga0209234_1020487	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300026295\|Ga0209234_1051313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1568	Open in IMG/M
3300026300\|Ga0209027_1275643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300026317\|Ga0209154_1185858	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300026550\|Ga0209474_10100217	Not Available	1951	Open in IMG/M
3300026552\|Ga0209577_10037828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4149	Open in IMG/M
3300027181\|Ga0208997_1049131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	627	Open in IMG/M
3300027388\|Ga0208995_1010475	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1570	Open in IMG/M
3300027638\|Ga0208612_1000057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	79655	Open in IMG/M
3300027669\|Ga0208981_1125188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	655	Open in IMG/M
3300027862\|Ga0209701_10207226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1166	Open in IMG/M
3300027875\|Ga0209283_10065506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2334	Open in IMG/M
3300027882\|Ga0209590_10245532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1141	Open in IMG/M
3300028708\|Ga0307295_10174525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300028711\|Ga0307293_10095758	All Organisms → cellular organisms → Bacteria → Terrabacteria group	941	Open in IMG/M
3300028721\|Ga0307315_10013789	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300028721\|Ga0307315_10243193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300028744\|Ga0307318_10194222	All Organisms → cellular organisms → Bacteria → Terrabacteria group	702	Open in IMG/M
3300028755\|Ga0307316_10296300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300028782\|Ga0307306_10256303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300028784\|Ga0307282_10109771	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1287	Open in IMG/M
3300028791\|Ga0307290_10037542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1731	Open in IMG/M
3300028819\|Ga0307296_10649532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	577	Open in IMG/M
3300028819\|Ga0307296_10653591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	575	Open in IMG/M
3300028828\|Ga0307312_10301199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300028878\|Ga0307278_10087318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1404	Open in IMG/M
3300028878\|Ga0307278_10306932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300028881\|Ga0307277_10093121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1272	Open in IMG/M
3300028885\|Ga0307304_10543138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	535	Open in IMG/M
3300030785\|Ga0102757_11138722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	598	Open in IMG/M
3300031152\|Ga0307501_10184011	Not Available	588	Open in IMG/M
3300033550\|Ga0247829_11455896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	566	Open in IMG/M
3300034026\|Ga0334946_083254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	538	Open in IMG/M
3300034268\|Ga0372943_0821983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.65%
Host-Associated	Host-Associated	3.62%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.78%
Aquatic	Environmental → Aquatic	10.87%
Plants	Host-Associated → Plants	3.62%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.06%
Freshwater	Environmental → Aquatic → Freshwater	7.97%
Sediment	Environmental → Aquatic → Sediment	2.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.99%
Ice	Environmental → Aquatic → Freshwater → Ice	7.25%
Loam	Environmental → Terrestrial → Soil → Loam	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.01%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	7.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.77%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	1.45%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.45%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002547	Polar desert microbial communities from Antarctic Dry Valleys - UQ889	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_04973390	2170459014	Switchgrass, Maize And Mischanthus Litter	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDESAASRYTRGTR
JGI10216J12902_1013942603	3300000956	Soil	MVTAIALAGGAWIFLAFVVVFTLATIYGLYTRRGSAINQRPYANAYTDAPGALGSSVLSHDESAASRYTRGTRA*
A2065W1_110534472	3300001537	Permafrost	MLGITLAGGAWIFGAFIIVMLFGMIYGLYTRTGSGINQRPYGNVYSSAPGAKGPSVLSHDESAASRYTRGTR*
JGI12053J15887_101231372	3300001661	Forest Soil	MTLAAFSLAGGAWIFLAFLIVFLIAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
JGI24973J35851_10024113	3300002547	Polar Desert	MTTIAFVLAGGSTIFGAFIVVFGLSVTYSLYTRRGSGINQRPYGNVYTNAPGAKGPSVLSHDQSAAQRYXRGTR*
Ga0062595_1009709921	3300004479	Soil	RGRREEGRGLCRHSHRSRAVQATLVAMVTAIALAGGAWIFLAFVVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGALGSSVLSHDESAASRYTRGTRA*
Ga0066672_101547082	3300005167	Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSSLSHDESAATRYTRGTR*
Ga0066672_109756391	3300005167	Soil	MTIAAFSLAGGAWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0066679_109735361	3300005176	Soil	MTFALALAGGAWIFAAFIVVFVVATIYSLYTRRGSAINQRPYANAYTSAPGARGPSTLSHDQSAARRYTRGTR*
Ga0066690_103603183	3300005177	Soil	RTVTPRRSRDDPGMTFALALAGGAWIFAAFIVVFVMATIYSLYTRRGSAINQRPYANAYTNAPGARGPSTLSHDQSAARRYTRGTR*
Ga0066684_102778782	3300005179	Soil	MTFALALAGGAWIFAAFIVVFLMATIYSLYTRRGSAINQRPYANAYTNAPGARGPSTLSHDQSAARRYTRGTR*
Ga0066675_103142062	3300005187	Soil	MFGIELAGGAWIFLAVILIWTVSIIYSLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDETASTRYTRGTR*
Ga0070706_1009414792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTIAAFSLAGGAWIFLAFIIVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0070698_1017399421	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTIAAFSLAGGAWIFLAFLIVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAA
Ga0070697_1007294152	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTVAIALAGGAWIFAAFLVVFLLATIYGLYTRRGSGINQRPYYNAYSSAPGATGPSTLSHDRSAAQRYTRGTRP*
Ga0066695_101699522	3300005553	Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRTGSGINPRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0066670_102582393	3300005560	Soil	MTAIALAGGSWIFAAVIVAFLLATIYGLYTRRGSAINQRPYANAYTNAPGARGSSTLSHDQTAARRYTRGTR*
Ga0066708_110212231	3300005576	Soil	RRSRDDPGMTFALALAGGAWIFAAFIVLFVMATIYSLYTRRGSAINQRPYANAYTNAPGARGPSTLSHDQTAARRYTRGTR*
Ga0066654_101667722	3300005587	Soil	MTIAAFSLAGGAWIFLAFLIVLLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0066654_103707862	3300005587	Soil	MTFALALAGGAWIFAAFIVVFLMATIYSLYTRRGSAINQRPYANAYTNAPGARGSSTLSHDQTAARRYTRGTR*
Ga0068861_1011299052	3300005719	Switchgrass Rhizosphere	MVTAIALAGGAWIFLAFVVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGALGSSVLSHDESAASRYTRGTRA*
Ga0066651_105805852	3300006031	Soil	MTIAAFSLAGGAWIFLAFILVFLAAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0066696_103491802	3300006032	Soil	MFGIELAGGAWIFLAVILIWTVSIIYSLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDESASTRYTRGTR*
Ga0066656_105640942	3300006034	Soil	MFGIEIAGGAWIFLAVILVFTASVIYGLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDENASTRYTRGTR*
Ga0066652_1002024243	3300006046	Soil	MFGIELAGGAWIFLAVILIWTVSIIYSLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDENASTRYTRGTR*
Ga0066658_101111512	3300006794	Soil	MTIAAFSLAGGAWIFLAFLIVSLAAVTCGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0066660_101636563	3300006800	Soil	MTFALALAGGAWIFAAFIVVFVMATIYSLYTRRGSAINQRPYANAYTNAPGARGPSTLSHDQSAARRYTRGTR*
Ga0066660_117163662	3300006800	Soil	MPDMTFAIALAGGAWIFAAFIVVFVLATIYSLYTRRGSAINQRPYANAYTSAPGAQGPSTLSHDQSAARRYTRGTR*
Ga0075425_1023563521	3300006854	Populus Rhizosphere	MFGIELAGGAWIFLAFILIFTASIIYGLYTRGGSGINQRPYEKNYSSAPGARIPSVLSHDESAATRYTRGTR*
Ga0079219_105109872	3300006954	Agricultural Soil	MTIAAFSLAGGAWIFLAFVIVFLVSVIYGLYTRGGSGINQRPYGSVYSNAPGARIPSTLSHDESAATRYTRGTH*
Ga0099830_103013622	3300009088	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0099828_115661881	3300009089	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGNVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0099827_102733941	3300009090	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFIVVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0066709_1018086712	3300009137	Grasslands Soil	MTIAAFSLAGGSWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0114129_115544752	3300009147	Populus Rhizosphere	MTAIVLAGGAWIFAGFIVAFLLATTYGLYTRRGSGINQRPYANAYTNAPGARGPSTLSHDESAATRYTRGTR*
Ga0126309_101450402	3300010039	Serpentine Soil	VQATLVVMTSAFILAGGSGVFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGSSVLSHDESAASRYTRGTRA*
Ga0127475_10762921	3300010095	Grasslands Soil	AMTIAAFSLAGGAWIFLAFLIVFLVAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0127449_10456341	3300010117	Grasslands Soil	GKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0127483_12790531	3300010142	Grasslands Soil	KMFGIEFAGGAWIFLAVILIWTVSIIYGLYTRTGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0126306_104484982	3300010166	Serpentine Soil	MISLSGGALIFAAFVVLYTFAVIYSLYTRRGSAINQRPYANAYTNAPGAKGASVLSHDESAASRYTRGTR*
Ga0126306_114045881	3300010166	Serpentine Soil	VHAKLVVMVTAIALAGGAWIFLAFVVAFTLATIYSLYTRRGSAINQRPYANAYTDAPGAQGSSVLSHDESAASRYTRGTRA*
Ga0134070_104315352	3300010301	Grasslands Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDQSAATRYTR
Ga0134082_101387411	3300010303	Grasslands Soil	MTFALALAGGAWIFAAFIVVFVMATIYSLYTRRGSAINQRPYANAYTNAPGARGASTLSHDQSAARRYTRSTR*
Ga0134064_102145581	3300010325	Grasslands Soil	VLVIVHDQGEGTMFGIELAGGAWIFLAVILIWTVSIIYSLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDENASTRYTRGTR*
Ga0134062_104613401	3300010337	Grasslands Soil	MTIAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0126354_12237832	3300010857	Boreal Forest Soil	MELADGAFIFLAVILVWFASIIYGLYTVRGSGINQRPYSQRYGDAPGAKIPSVLSHDESAATRYTRGTR*
Ga0126348_10535251	3300010862	Boreal Forest Soil	RGERTDMSIAAFSLAGGAWIFLAFVIVFLFAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0138112_10817591	3300010905	Grasslands Soil	GEGKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0138513_1000217261	3300011000	Soil	VFLAFVIFFTFATIYSLYTRRGSAINQRPYANVYTNAPGAQGPSVLSHDESAASRYTRGTRA*
Ga0136632_104540971	3300012093	Polar Desert Sand	MSVATILSLTPGSEVFAGFIIVFGLAVVFGLYTRTGSAINQRPYGNVYSNAPGAKGPSVLSHDESAARRLTRGTR*
Ga0136632_105005492	3300012093	Polar Desert Sand	MTMLALAGGSLIFLAFIIIFFFVLVYSFYTRTGSGINQRPYGNVYSSAPGAKGASVLSHDDSAARRYTRGTR*
Ga0136620_100431062	3300012186	Polar Desert Sand	MTTIAFTLAGGSTIFGIFIVVFGLSVVHGLYTRRGSGINQRPYGNVYSSAPGAKGASVLSHDDSAARRYTRGTR*
Ga0137382_106839552	3300012200	Vadose Zone Soil	MTFAAFTLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137376_105631342	3300012208	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137377_111923053	3300012211	Vadose Zone Soil	AMTIAAFTLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0150985_1121684701	3300012212	Avena Fatua Rhizosphere	GGAWIFLAFVIAFTLATIYSLYTRRGSAINQRPYANAYTDAPGAVGSSVLSHDESAASRIIRGTRA*
Ga0134028_10475261	3300012224	Grasslands Soil	EGKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRTGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0137370_106095232	3300012285	Vadose Zone Soil	MFGIELAGGAWIFLAVILVLTASVIYGLYTRGGSGINQRPYNKNYSSAPGASIPSVLSHDESAATRYTRGTR*
Ga0137371_106987772	3300012356	Vadose Zone Soil	MTAIALAGGAWIFAAFIVVFLLATIYSLYTRRGSAINQRPYANVYTSAPGAQGPSSLSHDQSAASRYTRGTR*
Ga0137371_107413702	3300012356	Vadose Zone Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDQSAATRYTRGTR*
Ga0137371_108291201	3300012356	Vadose Zone Soil	MTLAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSAYSNAPGAKIPSTLSHDECDATRYTRGTR*
Ga0137360_115293342	3300012361	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFIVVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137390_101069011	3300012363	Vadose Zone Soil	IAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0134042_11860842	3300012373	Grasslands Soil	DQGEGKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0134034_11599481	3300012375	Grasslands Soil	KMFGIELAGGAWIFLAFILIFTASVIYGLYTRGGSGINQRPYDKSYSSAPGARIPSVLSHDESAATRYTRGTR*
Ga0134047_12189202	3300012380	Grasslands Soil	HDQGEGKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0134043_10007562	3300012392	Grasslands Soil	QGEGKMFGIELAGGAWIFLAVILIWTVSIIYGLYTRTGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0134043_11389361	3300012392	Grasslands Soil	ERTAMTIAAFSLAGGAWIFLAFILVFLAALIYGLYTRGGSGINQRPFGSVYSNAPGARIPSTLSHDESAATRYTRGTR*
Ga0134048_13760442	3300012400	Grasslands Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSTLSHDESAATRYTRGTR*
Ga0136630_11232432	3300012529	Polar Desert Sand	MTTIAFTLAGGSTIFGIFIVVFGLSVVHGLYTRTGSGINQRPYGNVYSSAPGAKGASVLSHDESAARRYTRGTR*
Ga0136612_100032076	3300012680	Polar Desert Sand	MSGATILSLTPGSEVFAGFIVVFGLAVVFGLYTRTGSAINQRPYGNVYSNAPGAKGPSVLSHDESAARRLTRGTR*
Ga0137413_107910981	3300012924	Vadose Zone Soil	AWIFLAFVIVFLFAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137413_112198252	3300012924	Vadose Zone Soil	MTFAAFTLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0164301_107020791	3300012960	Soil	AMIIAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0164302_103917872	3300012961	Soil	MTIAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGRVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0134087_103133292	3300012977	Grasslands Soil	MTIAAFSLAGGAWIFLAFLIVFLVAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0120154_10077102	3300013501	Permafrost	MLGITLAGGAWIFGAFIIVMLFATIYGLYTRTGSGINQRPYGNVYSSAPGAKGPSVLSHDESAASRYTRGTR*
Ga0120179_10590691	3300013763	Permafrost	MLGFTLAGGAWIFGAFIIVMLFAMIYGLYTRTGSGINQRPYGNVYSSAPGAKGPSVLSHDESAASRYTRGTR*
Ga0134081_102014381	3300014150	Grasslands Soil	MTIAAFSLAGGAWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSSLSHDESAATRYTRGTR*
Ga0134079_102920612	3300014166	Grasslands Soil	MTIAAFSLAGGAWIFLAFVIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0167622_10078392	3300015158	Glacier Forefield Soil	MLASFTLAGGAWIFLAFIIAFLLSAIYGLYTVGGSGISQHPLGDVYSDAPGAKIPSVLSHDESAATRYTRGTR*
Ga0167623_10263052	3300015161	Glacier Forefield Soil	MTLATFSLAGGAWIFLAVIVVFAISAIYGLYTRRGSGINQRSYSRAYNSAPGAKIPSVLSHDQNAAVRYTRGTR*
Ga0137418_101376801	3300015241	Vadose Zone Soil	RLEYLGERAAMTIAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137412_100325213	3300015242	Vadose Zone Soil	MTIAAFTLAGGAWIFLAFIIVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0137409_113970031	3300015245	Vadose Zone Soil	MTIAAFTLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSSLSHDESAATRYTRGTR*
Ga0134072_102756381	3300015357	Grasslands Soil	AAFSLAGGAWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR*
Ga0132258_129873652	3300015371	Arabidopsis Rhizosphere	MTTALITLAGGAWIFLAFVIAFTLATIYGLYTRRGSAINQRPYANAYTNAPGAQGPSVLSHDESAASRYTRGTRA*
Ga0180121_101791992	3300017695	Polar Desert Sand	MSVATILSLTPGSEVFAGFIVVFGLAVVFGLYTRTGSAINQRPYGNVYSNAPGAKGPSVLSHDESAARRLTRGTR
Ga0183260_100140883	3300017787	Polar Desert Sand	MTTIAFTLAGGSTIFGIFIVVFGLSVVHGLYTRTGSGINQRPYGNVYSSAPGAKGASVLSHDDSAARRYTRGTR
Ga0136617_100074215	3300017789	Polar Desert Sand	MSVATILSLTPGSEVFAGFIIVFGLAVVFGLYTRTGSAINQRPYGNVYSNAPGAKGPSVLSHDESAARRLTRGTR
Ga0184621_101032311	3300018054	Groundwater Sediment	VHATLVVMVTAIALAGGAWIFLAFVVVFTFATIYSLYTRRGSAINQRPYANVYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0184621_101369512	3300018054	Groundwater Sediment	MTIAAFSLAGGAWIFLAFVLVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGARIPSSLSHDESAATRYTRGTR
Ga0184624_101925442	3300018073	Groundwater Sediment	VQATLVAMVTAIALAGGAWIFLAFVIFFTFATIYSLYTRRGSAINQRPYANAYTNAPGAQGPSVLSHDESAASRYTRGTRA
Ga0190269_119435082	3300018465	Soil	VHAKLVVMVTAIALAGGAWIFLAFVVVFTFATIYSLYTRRGSAINQRPYANVYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0066662_104162122	3300018468	Grasslands Soil	MFAAPAIALAGGAWIFLAFIVLYAAGVVHGLYTRSGSGINQRPWGARHGEAAGARGASVLHHDESAASRYTRGTG
Ga0066662_111304901	3300018468	Grasslands Soil	MTIAAFSLAGGAWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGT
Ga0190274_126827151	3300018476	Soil	VHAKLVVMVTAIALAGGAWIFLAFVVAFTFATIYGLYTRRGSAINQRPYANAYTDAPGAQGSSVLSHDESAASRYTRGTRA
Ga0066669_117592642	3300018482	Grasslands Soil	MFGIELAGGAWIFLAVILIWTVSIIYSLYTRGGSGINQRPHANAYTSAPGARIPSSLSHDENASTRYTRGTR
Ga0179594_103741182	3300020170	Vadose Zone Soil	MTFAAFTLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0210400_116632051	3300021170	Soil	GAAMATFSLAGGAWIFLAFVIVFLVAVTYGLYTRRGSGINQRPYGNVYTNAPGARGSSVLAHDESAATRYTRGTRA
Ga0222625_16560722	3300022195	Groundwater Sediment	GIELAGGAWIFLAFILIWTASIIYSLYTRRGSGINQRPYANVYSSAPGAKIPSTLSHDESAATRYTRGTR
Ga0222622_112363641	3300022756	Groundwater Sediment	VHATLVVMVTAIALAGGAWIFLAFVVVFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0179589_102937332	3300024288	Vadose Zone Soil	MTFAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0209234_10204872	3300026295	Grasslands Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSSLSHDESAATRYTRGTR
Ga0209234_10513132	3300026295	Grasslands Soil	MTIAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPYGSVYSNAPGARIPSTLSHDQSAATRYTRGTR
Ga0209027_12756432	3300026300	Grasslands Soil	MTIAAFSLAGGAWIFLAFLIVFLAAVIYGLYTRGGSGINQRPHGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0209154_11858581	3300026317	Soil	MFGIELAGGAWIFLAVILIWTVSIIYGLYTRSGSGINQRPHANAYTNAPGARIPSSLSHDESAATRYTRG
Ga0209474_101002172	3300026550	Soil	MTFALALAGGAWIFAAFIVVFLMATIYSLYTRRGSAINQRPYANAYTNAPGARGSSTLSHDQTAARRYT
Ga0209577_100378284	3300026552	Soil	MTFALALAGGAWIFAAFIVVFVMATIYSLYTRRGSAINQRPYANAYTNAPGARGPSTLSHDQSAARRYTRGTR
Ga0208997_10491312	3300027181	Forest Soil	MTIAAFSLAGGAWIFLAFLIVFLVAVIYGLYTRGGSGINQRPHGNVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0208995_10104752	3300027388	Forest Soil	MTIAAFSLAGGAWIFLAFIIVFLAAVIYGLYTRGGSGINQRPYGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0208612_100005777	3300027638	Polar Desert	MTTIAFVLAGGSTIFGAFIVVFGLSVTYSLYTRRGSGINQRPYGNVYTNAPGAKGPSVLSHDQSAAQRYTRGTR
Ga0208981_11251882	3300027669	Forest Soil	MTFAAFSLAGGAWIFLAFLIVFLVAVIYGLYTRGGSGINQRPHGNVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0209701_102072262	3300027862	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0209283_100655063	3300027875	Vadose Zone Soil	AAFTLAGGAWIFLAFVIVFLVAVIYGLYTRGGSGINQRPFGNVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0209590_102455321	3300027882	Vadose Zone Soil	MTIAAFSLAGGAWIFLAFIVVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR
Ga0307295_101745252	3300028708	Soil	VQATLVAMVTAIALAGGAWVFLAFVIFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307293_100957582	3300028711	Soil	MVTAIALAGGAWIFLAFVVAFTVATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307315_100137892	3300028721	Soil	MVTAIALAGGAWVFLAFVIFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307315_102431932	3300028721	Soil	MTIAAFSLAGGAWIFLAFVLVFLVAVIYGLYTRGGSGINQRPFGSVYSNAHGARIPSSLSHDESAATRYTRGTR
Ga0307318_101942222	3300028744	Soil	VQATLVAMVSAIALAGGAWVFLAFVIFFTFATIYSLYTRRGSAINQRPYANAYTNAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307316_102963001	3300028755	Soil	LRATLVVMVTAIALAGGAWIFLAFVVAFTVATIYSLYTRRGSAINQRPYANAYTDAPGAQGSSVLSHDESAASRYTRGTRA
Ga0307306_102563032	3300028782	Soil	MTFAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPHGSVYSSSPGARIPSTLSHDQSAATRYTRGTR
Ga0307282_101097712	3300028784	Soil	VQATLVFMTSAIILAGGSGIFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGSSVLSHDESAASRYTRGTRA
Ga0307290_100375422	3300028791	Soil	GRRENGRGLCRHSHRSRAVQATLVAMVTAIALAGGAWVFLAFVIFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307296_106495321	3300028819	Soil	MFGIELAGGAWIFLAFILIWTASIIYSLYTRRGSGINQRPYANVYSSAPGAKIPSTLSHDESAATRYTRGTR
Ga0307296_106535912	3300028819	Soil	MTFAAFSLAGGAWIFLAFLIVFLFAVIYGLYTRGGSGINQRPFGSVYSNAPGARIPSSLSHDESAATRYTRGTR
Ga0307312_103011991	3300028828	Soil	VQATLVFMTSAIILAGGSGIFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307278_100873181	3300028878	Soil	VHATLVGMVTAIALAGGAWIFLAFVVVFTFATIYSLYTRRGSAINQRPYANVYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0307278_103069322	3300028878	Soil	MTIAAFSLAGGAWIFLAFVLVFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGARIPSSLSHDE
Ga0307277_100931212	3300028881	Soil	MTAIALAGGAWIFAAFIVVFLLATTYGLYTRRGSGINQRPYANAYTNAPGARGASTLSHDQSAATRYTRGTR
Ga0307304_105431382	3300028885	Soil	FMTSAIILAGGSGIFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0102757_111387222	3300030785	Soil	LAGGAWIFLAFVLIFLVAVIYGLYTRGGSGINQRPFGSVYSNAPGARIPSSLSHDESAATRYTRGTR
Ga0307501_101840112	3300031152	Soil	VFMTSAIILAGGSGIFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGAQGPSVLSHDESAASRYTRGTRA
Ga0247829_114558962	3300033550	Soil	CRHSHRSRTVNATLVVMVTAIALAGGAWIFLAFIVFFTFATIYSLYTRRGSAINQRPYANAYTDAPGALGSSVLSHDESAASRYTRGTRA
Ga0334946_001125_2797_3018	3300034026	Sub-Biocrust Soil	MTFAFALAGGAWIFAAFLIFFTLATIYSLYTRRGSGINQHPYANAYSNAPGASGSSTVGNDRVAASNLTRGTR
Ga0334946_083254_246_473	3300034026	Sub-Biocrust Soil	MSTLAIALAGGAWIFGAFVVLFTLATIYSLYTRRGSGINQRAYANPYTSAPGARGSSTVGNDRIAASNLTRGTRA
Ga0372943_0821983_49_273	3300034268	Soil	MTLAAFSLAGGAWIFLAFLIVFLIAVIYGLYTRGGSGINQRPFGSVYSNAPGAKIPSTLSHDESAATRYTRGTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences