Metagenome / Metatranscriptome Family F055607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055607
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	107 residues
Representative Sequence	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIRTGKGTR
Number of Associated Samples	95
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.99 %
% of genes near scaffold ends (potentially truncated)	26.81 %
% of genes from short scaffolds (< 2000 bps)	81.16 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.014 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.464 % of family members)
Environment Ontology (ENVO)	Unclassified (29.710 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.551 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.52% β-sheet: 28.44% Coil/Unstructured: 44.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00912	Transgly	8.70
PF08545	ACP_syn_III	4.35
PF04723	GRDA	1.45
PF01471	PG_binding_1	1.45
PF08238	Sel1	0.72
PF01878	EVE	0.72
PF13607	Succ_CoA_lig	0.72
PF02538	Hydantoinase_B	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	8.70
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	8.70
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	8.70
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.45
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.72
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
All Organisms	root	All Organisms	28.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
cellular organisms	root	All Organisms → cellular organisms	28.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.32 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.97 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	5.07 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.90 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	7.97 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	5.07 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.90 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.97 %
Thiodictyon	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon	5.07 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.01 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7.97 %
Candidatus Thiodictyon syntrophicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	5.07 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105878892	Not Available	628	Open in IMG/M
3300000559\|F14TC_101246671	Not Available	662	Open in IMG/M
3300000787\|JGI11643J11755_11560083	Not Available	799	Open in IMG/M
3300000955\|JGI1027J12803_102271137	Not Available	530	Open in IMG/M
3300000956\|JGI10216J12902_103456991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2718	Open in IMG/M
3300003911\|JGI25405J52794_10000399	All Organisms → cellular organisms → Bacteria	6106	Open in IMG/M
3300004268\|Ga0066398_10215322	Not Available	513	Open in IMG/M
3300004463\|Ga0063356_100977511	Not Available	1206	Open in IMG/M
3300004633\|Ga0066395_10532982	Not Available	681	Open in IMG/M
3300005093\|Ga0062594_101092703	Not Available	778	Open in IMG/M
3300005093\|Ga0062594_101989352	Not Available	620	Open in IMG/M
3300005181\|Ga0066678_10421268	Not Available	886	Open in IMG/M
3300005294\|Ga0065705_10053402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1144	Open in IMG/M
3300005294\|Ga0065705_10198257	Not Available	1448	Open in IMG/M
3300005332\|Ga0066388_100603173	Not Available	1720	Open in IMG/M
3300005332\|Ga0066388_107170066	Not Available	560	Open in IMG/M
3300005445\|Ga0070708_100135236	Not Available	2283	Open in IMG/M
3300005447\|Ga0066689_10501474	Not Available	766	Open in IMG/M
3300005466\|Ga0070685_10320445	Not Available	1050	Open in IMG/M
3300005557\|Ga0066704_10563918	Not Available	739	Open in IMG/M
3300005559\|Ga0066700_10555741	Not Available	801	Open in IMG/M
3300005764\|Ga0066903_101274061	Not Available	1371	Open in IMG/M
3300005764\|Ga0066903_101553749	Not Available	1252	Open in IMG/M
3300005764\|Ga0066903_101712652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1197	Open in IMG/M
3300005764\|Ga0066903_104357619	Not Available	756	Open in IMG/M
3300005937\|Ga0081455_10660299	Not Available	672	Open in IMG/M
3300005981\|Ga0081538_10013441	All Organisms → cellular organisms → Bacteria	6478	Open in IMG/M
3300005983\|Ga0081540_1004854	All Organisms → cellular organisms → Bacteria → Proteobacteria	10135	Open in IMG/M
3300006049\|Ga0075417_10064724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1608	Open in IMG/M
3300006049\|Ga0075417_10281839	Not Available	803	Open in IMG/M
3300006794\|Ga0066658_10338979	Not Available	803	Open in IMG/M
3300006797\|Ga0066659_10826810	Not Available	769	Open in IMG/M
3300006844\|Ga0075428_100135808	Not Available	2674	Open in IMG/M
3300006844\|Ga0075428_100368119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1541	Open in IMG/M
3300006844\|Ga0075428_100580860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1197	Open in IMG/M
3300006844\|Ga0075428_102014968	Not Available	598	Open in IMG/M
3300006844\|Ga0075428_102196042	Not Available	569	Open in IMG/M
3300006845\|Ga0075421_100391953	Not Available	1669	Open in IMG/M
3300006845\|Ga0075421_102639535	Not Available	520	Open in IMG/M
3300006846\|Ga0075430_100269393	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300006847\|Ga0075431_101531789	Not Available	625	Open in IMG/M
3300006871\|Ga0075434_100956655	Not Available	871	Open in IMG/M
3300006904\|Ga0075424_101325686	Not Available	765	Open in IMG/M
3300006969\|Ga0075419_10109805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1779	Open in IMG/M
3300006969\|Ga0075419_10965652	Not Available	618	Open in IMG/M
3300007076\|Ga0075435_101361578	Not Available	622	Open in IMG/M
3300007255\|Ga0099791_10044921	Not Available	1968	Open in IMG/M
3300009012\|Ga0066710_100200647	Not Available	2839	Open in IMG/M
3300009038\|Ga0099829_10044041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3270	Open in IMG/M
3300009090\|Ga0099827_10100778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2295	Open in IMG/M
3300009090\|Ga0099827_10142219	Not Available	1956	Open in IMG/M
3300009094\|Ga0111539_10137365	Not Available	2863	Open in IMG/M
3300009094\|Ga0111539_10402175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1595	Open in IMG/M
3300009094\|Ga0111539_11857589	Not Available	698	Open in IMG/M
3300009137\|Ga0066709_100736550	Not Available	1422	Open in IMG/M
3300009147\|Ga0114129_10119487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3630	Open in IMG/M
3300009147\|Ga0114129_11749763	Not Available	757	Open in IMG/M
3300009162\|Ga0075423_10190165	Not Available	2154	Open in IMG/M
3300009162\|Ga0075423_10452876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1349	Open in IMG/M
3300009162\|Ga0075423_10865743	Not Available	957	Open in IMG/M
3300009553\|Ga0105249_10047428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3915	Open in IMG/M
3300010043\|Ga0126380_10426169	Not Available	995	Open in IMG/M
3300010043\|Ga0126380_10526681	Not Available	913	Open in IMG/M
3300010043\|Ga0126380_11134691	Not Available	669	Open in IMG/M
3300010046\|Ga0126384_10523033	Not Available	1026	Open in IMG/M
3300010046\|Ga0126384_10886030	Not Available	805	Open in IMG/M
3300010046\|Ga0126384_10951738	Not Available	779	Open in IMG/M
3300010047\|Ga0126382_10154295	Not Available	1577	Open in IMG/M
3300010047\|Ga0126382_10189824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1451	Open in IMG/M
3300010304\|Ga0134088_10542289	Not Available	575	Open in IMG/M
3300010335\|Ga0134063_10340681	Not Available	727	Open in IMG/M
3300010358\|Ga0126370_10623501	Not Available	935	Open in IMG/M
3300010358\|Ga0126370_11729459	Not Available	603	Open in IMG/M
3300010359\|Ga0126376_10804632	Not Available	918	Open in IMG/M
3300010359\|Ga0126376_10970040	Not Available	847	Open in IMG/M
3300010359\|Ga0126376_11888606	Not Available	637	Open in IMG/M
3300010359\|Ga0126376_13059178	Not Available	517	Open in IMG/M
3300010360\|Ga0126372_10182863	Not Available	1723	Open in IMG/M
3300010360\|Ga0126372_12348884	Not Available	583	Open in IMG/M
3300010361\|Ga0126378_11026378	Not Available	928	Open in IMG/M
3300010362\|Ga0126377_10573417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1170	Open in IMG/M
3300010362\|Ga0126377_11158527	Not Available	843	Open in IMG/M
3300010362\|Ga0126377_13224599	Not Available	527	Open in IMG/M
3300010366\|Ga0126379_13823862	Not Available	504	Open in IMG/M
3300010398\|Ga0126383_11137850	Not Available	870	Open in IMG/M
3300010398\|Ga0126383_11207274	Not Available	846	Open in IMG/M
3300010398\|Ga0126383_11273888	Not Available	825	Open in IMG/M
3300010398\|Ga0126383_11703342	Not Available	719	Open in IMG/M
3300010398\|Ga0126383_12595061	Not Available	590	Open in IMG/M
3300010868\|Ga0124844_1141816	Not Available	912	Open in IMG/M
3300011270\|Ga0137391_10689900	Not Available	849	Open in IMG/M
3300012199\|Ga0137383_10095145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2160	Open in IMG/M
3300012202\|Ga0137363_10621758	Not Available	912	Open in IMG/M
3300012206\|Ga0137380_10254215	Not Available	1583	Open in IMG/M
3300012207\|Ga0137381_10295798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1409	Open in IMG/M
3300012209\|Ga0137379_10445235	Not Available	1204	Open in IMG/M
3300012210\|Ga0137378_10057320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	3515	Open in IMG/M
3300012357\|Ga0137384_10218405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1594	Open in IMG/M
3300012359\|Ga0137385_10290722	Not Available	1408	Open in IMG/M
3300012685\|Ga0137397_10221402	Not Available	1409	Open in IMG/M
3300012929\|Ga0137404_11477234	Not Available	629	Open in IMG/M
3300012930\|Ga0137407_10655599	Not Available	987	Open in IMG/M
3300012948\|Ga0126375_10206560	Not Available	1294	Open in IMG/M
3300012948\|Ga0126375_11775991	Not Available	537	Open in IMG/M
3300012948\|Ga0126375_11959129	Not Available	516	Open in IMG/M
3300012971\|Ga0126369_10359721	Not Available	1481	Open in IMG/M
3300014326\|Ga0157380_10123805	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300014326\|Ga0157380_12847332	Not Available	550	Open in IMG/M
3300014880\|Ga0180082_1157691	Not Available	526	Open in IMG/M
3300015241\|Ga0137418_10100338	All Organisms → cellular organisms → Bacteria → Proteobacteria	2604	Open in IMG/M
3300015371\|Ga0132258_10476230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	3117	Open in IMG/M
3300015371\|Ga0132258_11810389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1539	Open in IMG/M
3300016270\|Ga0182036_10973517	Not Available	698	Open in IMG/M
3300016371\|Ga0182034_10479172	Not Available	1034	Open in IMG/M
3300016445\|Ga0182038_11001602	Not Available	740	Open in IMG/M
3300019487\|Ga0187893_10151513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	1886	Open in IMG/M
3300021560\|Ga0126371_10453535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1428	Open in IMG/M
3300025961\|Ga0207712_10041314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3169	Open in IMG/M
3300026118\|Ga0207675_101321205	Not Available	742	Open in IMG/M
3300027873\|Ga0209814_10029920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiodictyon → Candidatus Thiodictyon syntrophicum	2239	Open in IMG/M
3300027873\|Ga0209814_10246093	Not Available	775	Open in IMG/M
3300027874\|Ga0209465_10219094	Not Available	950	Open in IMG/M
3300027880\|Ga0209481_10164236	Not Available	1100	Open in IMG/M
3300027882\|Ga0209590_10030846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2830	Open in IMG/M
3300027882\|Ga0209590_10062818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2112	Open in IMG/M
3300027907\|Ga0207428_10342593	Not Available	1101	Open in IMG/M
3300027909\|Ga0209382_10066153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	4276	Open in IMG/M
3300027909\|Ga0209382_10095002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3498	Open in IMG/M
3300027909\|Ga0209382_10352940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1647	Open in IMG/M
3300028536\|Ga0137415_10091473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2899	Open in IMG/M
3300028587\|Ga0247828_10117228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1287	Open in IMG/M
3300031547\|Ga0310887_10936161	Not Available	550	Open in IMG/M
3300031573\|Ga0310915_11051653	Not Available	567	Open in IMG/M
3300031854\|Ga0310904_11393609	Not Available	510	Open in IMG/M
3300031954\|Ga0306926_11874280	Not Available	678	Open in IMG/M
3300032261\|Ga0306920_101244606	Not Available	1073	Open in IMG/M
3300034662\|Ga0314783_001584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2527	Open in IMG/M
3300034676\|Ga0314801_024269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1062	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.84%
Host-Associated	Host-Associated	31.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.12%
Plants	Host-Associated → Plants	31.16%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Sediment	Environmental → Aquatic → Sediment	0.72%
Cave	Environmental → Terrestrial → Cave	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.36%
Loam	Environmental → Terrestrial → Soil → Loam	9.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	22.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.62%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058788921	3300000364	Soil	MRDCRYFLLALLLGTLTLTCCTRRSEPIDTYQSAVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLENGVV
F14TC_1012466711	3300000559	Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLED
JGI11643J11755_115600831	3300000787	Soil	MRDCRYLLLALLLGTLTLPCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVIHTGKGTR*
JGI1027J12803_1022711372	3300000955	Soil	TCCARRSEPIETRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKGTR*
JGI10216J12902_1034569913	3300000956	Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQSEPIATRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVATPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
JGI25405J52794_100003993	3300003911	Tabebuia Heterophylla Rhizosphere	MRDHCYLLLTLLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPALITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKETR*
Ga0066398_102153221	3300004268	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRESVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKGTR*
Ga0063356_1009775111	3300004463	Arabidopsis Thaliana Rhizosphere	PMRDRRYLLLALLLGTLTLTCCGRRSEPIGIRQPPMIHPGMTEAEVIQRLGPPGLITEQPPVHVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGRGTR*
Ga0066395_105329821	3300004633	Tropical Forest Soil	MRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKT
Ga0062594_1010927032	3300005093	Soil	MRDRQNLLLGFLLGVLILTGCARPTAPSAISLPNPIRPGMSEAEIVQLLGPPGLVMEQPAVRVSVPTPTGMAFHEKRRYTYYYLGPSQDLDTLITLEDGIVISTGKGTR*
Ga0062594_1019893521	3300005093	Soil	MCDRRYLLVALLLGTLILTCCAHRSEPIDTRLPALIHPGLTEAEVVQRLGPPVLITEQPSARVQVPTPTGIEFREKRRYTYYYLGPSQELDTLITLEDGVVINTGQGTR*
Ga0066678_104212682	3300005181	Soil	MRDHCYLLLALLLSMLTLTCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLQFREKRRYTYYYLGPSQELDTPITFEDGVVIHTGKETR*
Ga0065705_100534023	3300005294	Switchgrass Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGMR*
Ga0065705_101982573	3300005294	Switchgrass Rhizosphere	LGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYMQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0066388_1006031732	3300005332	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGTSEELDMLITLEDGVVIHTGKKTR*
Ga0066388_1071700661	3300005332	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDPRPPALIHSGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKGTR*
Ga0070708_1001352362	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPMGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR*
Ga0066689_105014741	3300005447	Soil	MRDHCYLLLALLLSMLTLTCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGLEFREKRRYTYYYLGPSQ
Ga0070685_103204452	3300005466	Switchgrass Rhizosphere	MCDRRYLLVALLLGTLILTCCAHRSEPIDTRLPALIHPGLTEAEVVQRLGPPVLITEQPSARVQVPTPTGIEFREKRRYTYYYLGPSQELDTLITLEDGVVINRDKGTR*
Ga0066704_105639181	3300005557	Soil	MRDHCYLLLALLLSMLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSASVQVPTPTGIGFRDKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGPR*
Ga0066700_105557412	3300005559	Soil	MRDHRYLLLALLLSTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLAFREKRRYTYYYLGPSQELDTPITLEDGVVIHTGK
Ga0066903_1012740611	3300005764	Tropical Forest Soil	MQDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0066903_1015537492	3300005764	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPMGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0066903_1017126522	3300005764	Tropical Forest Soil	MRDRHYLVLALLLGTLALTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTSVQVPTPMGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR*
Ga0066903_1043576191	3300005764	Tropical Forest Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALVHPGMTEAELVQLLGPPVLITEQPSAPMQVPTPTGIEFREKRRYTFYYLGPSQDLDTPIALEDGVVVST
Ga0081455_106602992	3300005937	Tabebuia Heterophylla Rhizosphere	MGDCRYLLRALLLGTLTLTCCARPPEPIHTRQPDLIHLGMTEAEVVQHLGPPVLITEQPSTRVQVPTPTGIEFREKRRYTYYYVGPSQDLDTLITLEDGVVISTGKVTR*
Ga0081538_100134412	3300005981	Tabebuia Heterophylla Rhizosphere	MRDRRYLLLALLLGTLTLTCCTRHSEPIDSRQPALIHPGMTEAEVVQRLGPPVLITEQPSLRVQVPTPAGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIQTGKGTR*
Ga0081540_10048546	3300005983	Tabebuia Heterophylla Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVMQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0075417_100647242	3300006049	Populus Rhizosphere	MRDCRYFLLALLLSTLTLTCCTRRSEPIDTYQSAVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLENGVVIHTGKGTR*
Ga0075417_102818392	3300006049	Populus Rhizosphere	YLLLALLLGTLTLTCCARRSESIDTRQSEPIATRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVATPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0066658_103389791	3300006794	Soil	MRDHCYLLLALLLSTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLAFREKRRYTYYYLGPSQELDTRITLEDGVVIHTGKETR*
Ga0066659_108268102	3300006797	Soil	MRERRYLLVALLLGTLTLTCCARRSEPIDTRQPALIHSGMTEAEVVQRLGPPVLITEQPSASVQVPTPTGIGFRDKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGPR*
Ga0075428_1001358081	3300006844	Populus Rhizosphere	MRDRRYLLLTLLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR*
Ga0075428_1003681193	3300006844	Populus Rhizosphere	MRDCRYLLLALLLGTLILTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0075428_1005808603	3300006844	Populus Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYFGPSQDLDTLITLEDGVVIHTGK
Ga0075428_1020149682	3300006844	Populus Rhizosphere	MRDRQYLLLGFLLGVLLLTGCARPTAPSAISPPNPIRPGMTEAEIVQLLGPPGLVMEQPAVRVSVPTPTGIAFHEKRRYTYYYLGPSQDLDTLITLEDGVVISTDKGRR*
Ga0075428_1021960421	3300006844	Populus Rhizosphere	MRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQALDMLITLEDGVVVNPGQGTR*
Ga0075421_1003919531	3300006845	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTYQSALVHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0075421_1026395351	3300006845	Populus Rhizosphere	MRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR*
Ga0075430_1002693932	3300006846	Populus Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0075431_1015317892	3300006847	Populus Rhizosphere	LPMRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQALDMLITLEDGVVVNPGQGTR*
Ga0075434_1009566552	3300006871	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIVSRQPGLIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPRGLEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKETR*
Ga0075424_1013256863	3300006904	Populus Rhizosphere	MRDCHYLLLALLLGTLTLTCCARRSEPIDTRQSAFVHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPRGIEFREKHRYTYYYLGPSQDLDTLIILEDGVVIQTGKETR*
Ga0075419_101098052	3300006969	Populus Rhizosphere	MRDCRYFLLALLLSTLTLTCCTRRSEPIDTYQSAVVHPGMTEAEVVERLGPPVLITEHPSVPVQVPTPTGIEFLEKRRYTYYYLGPSQDLDTLITLENGVVIHTGKGTR*
Ga0075419_109656522	3300006969	Populus Rhizosphere	ARRSEPIDTRQSEPIATRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVATPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0075435_1013615781	3300007076	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTHEPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTG
Ga0099791_100449213	3300007255	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0066710_1002006473	3300009012	Grasslands Soil	MRDHCYLLLALLLSMLTLTCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR
Ga0099829_100440413	3300009038	Vadose Zone Soil	MRDRRYLLLALLLGTLTLPCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAHVQVPTPTGIEFREKRRYTYYYLDPSQDLGTLITLEDGVVIHTGKGTR*
Ga0099827_101007781	3300009090	Vadose Zone Soil	LLLGTLTLTGCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0099827_101422192	3300009090	Vadose Zone Soil	MRDRRYLLLALLLGTLTLPCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAHVQVPTPTGIEFREKRRYTYYYLDPSQDLDTLITLEDGVVIHTGKGTR*
Ga0111539_101373653	3300009094	Populus Rhizosphere	MRDRRYLLLTLLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR*
Ga0111539_104021753	3300009094	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTYQSVVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0111539_118575892	3300009094	Populus Rhizosphere	MRDRQNLLLGFLLGVLILTGCARPTAPSAISLPNPIRPGMSEAEIVQLLGPPGLVMEQPAVRVSVPTPTGMAFHEKRRYTYYYLGPSQDLDTLITLEDGVVISTG
Ga0066709_1007365501	3300009137	Grasslands Soil	MLTLTCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR*
Ga0114129_101194872	3300009147	Populus Rhizosphere	MRDRRYLLLALLLGTLTLTCCARRSESIDTRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVATPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0114129_117497632	3300009147	Populus Rhizosphere	ALLLSTLTLTCCARRSEPIDTREPDLLHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYFGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0075423_101901653	3300009162	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTYQSVVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLENGVVIHTGKGTR*
Ga0075423_104528761	3300009162	Populus Rhizosphere	MRDCRYLLLTLLLGTLTLTCCARRSEPIDTRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKV
Ga0075423_108657432	3300009162	Populus Rhizosphere	LLLGTLTLTCCARRSEPIDTQQPALIQPGMTEAEVVQRLGPPVLVTEQPSAPVQVPTPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0105249_100474285	3300009553	Switchgrass Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0126380_104261692	3300010043	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRAEPIDTRESVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKETR*
Ga0126380_105266812	3300010043	Tropical Forest Soil	TCCARRAAPIDTRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGTSEELDMLITLEDGVVIHTGKKTR*
Ga0126380_111346912	3300010043	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPINTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0126384_105230331	3300010046	Tropical Forest Soil	MIITLKELSMRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVVHTGKKTR*
Ga0126384_108860302	3300010046	Tropical Forest Soil	MQDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGQSQDPDTLITLEDGVVINTGKGTR*
Ga0126384_109517382	3300010046	Tropical Forest Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIRTGKGTR*
Ga0126382_101542952	3300010047	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKETR*
Ga0126382_101898241	3300010047	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQSALIQRGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0134088_105422891	3300010304	Grasslands Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQSALIHSGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIH
Ga0134063_103406812	3300010335	Grasslands Soil	CCARRSEPIDTRQPTLIHPGITEAEVVQRLGPPVLITEQPSTPVQVPTPTGLAFREKRRYTYYYLGPSQELDTPITLEDGVVIHTGKETR*
Ga0126370_106235011	3300010358	Tropical Forest Soil	MIITLKELSMRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPSTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0126370_117294591	3300010358	Tropical Forest Soil	MQDCRYLLLALLLGTLTLTCCARRSEPIDTRQSAFIHPGMTEAEVVQRLGPPVLITEQPAAPVQVSTPKGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR*
Ga0126376_108046321	3300010359	Tropical Forest Soil	TLKELTMRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0126376_109700402	3300010359	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQLALIHPGMTEAEVVQRLGPPVLITEQPSTYGQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0126376_118886061	3300010359	Tropical Forest Soil	MRDRHYLLLALLLGTLSLTCCARRAAPIDTRQPALIHPGMTEAEVVQHLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSQDLD
Ga0126376_130591781	3300010359	Tropical Forest Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALVHPGMTEAELVQLLGPPVLITEQPSAPMQVPTPTGIEFREKRRYTYYYLGPSQDLDTPITLEDGVVISTGKGTR*
Ga0126372_101828633	3300010360	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0126372_123488841	3300010360	Tropical Forest Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALVHPGMTEAELVQLLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTPITLEDGVVISTGKGTR*
Ga0126378_110263782	3300010361	Tropical Forest Soil	MRDRHYLILALLLGTLALTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTSVQVPTPTGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR*
Ga0126377_105734173	3300010362	Tropical Forest Soil	MRDHRYLLLTLLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPALITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKETR*
Ga0126377_111585271	3300010362	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIQ
Ga0126377_132245991	3300010362	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0126379_138238621	3300010366	Tropical Forest Soil	MEAAYHYWLLTEEPSMRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALVHPGMTEAELVQLLGPPVLITEQPSAPMQVPTPTGIEFREKRRYTYYYLGPSQ
Ga0126383_111378501	3300010398	Tropical Forest Soil	CARRSEPIDTRESVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR*
Ga0126383_112072742	3300010398	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQSEPTDTRQPALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVSTPTGIEFREKHRYTYYYLGPSQDLDTLINLEDGVVINTGKVTR*
Ga0126383_112738882	3300010398	Tropical Forest Soil	GTLTLTCCARRSEPIDTRQPALVHPGMTEAELVQLLGPPVLITEQPSAPMQVPTPTGIEFREKRRYTYYYLGPSQDLDTPITLEDGVVISTGKGTR*
Ga0126383_117033422	3300010398	Tropical Forest Soil	MRDRHYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0126383_125950611	3300010398	Tropical Forest Soil	LLLGTLSLTCCARRAVPIDTRQPALIHPGMTEAEVVQRLGPPVLVTEQPSTSVQVPTPMGIEFREKRRYTYYYLGTSEELDMLITLEDGVVIQTGKKTR*
Ga0124844_11418161	3300010868	Tropical Forest Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYGQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR*
Ga0137391_106899002	3300011270	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTGCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTG
Ga0137383_100951452	3300012199	Vadose Zone Soil	MLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR*
Ga0137363_106217582	3300012202	Vadose Zone Soil	CARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0137380_102542152	3300012206	Vadose Zone Soil	MLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKGTR*
Ga0137381_102957982	3300012207	Vadose Zone Soil	MSMLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIGFRDKRRYTYYYLGPSQELDTPITLEDGVVIHTGKGTR*
Ga0137379_104452352	3300012209	Vadose Zone Soil	MRDHRYLLLALLLSTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR*
Ga0137378_100573202	3300012210	Vadose Zone Soil	MRDCRYLLLALLLSTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLAFREKRRYTYYYLGPSQELDTPITLEDGVFIHTGKETR*
Ga0137384_102184052	3300012357	Vadose Zone Soil	MRDHRYLLLALLLSTLTLTCCARRSEPIDTRRPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKGTR*
Ga0137385_102907221	3300012359	Vadose Zone Soil	MRDHRYLLLALLLSTLTLTCCARRSEPIDTRRPALIHPGMTEAEVVQRLGPPVLITEQPSTPVQVPTPTGLEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKETR*
Ga0137397_102214023	3300012685	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVILHTGQGRR*
Ga0137404_114772341	3300012929	Vadose Zone Soil	TLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0137407_106555992	3300012930	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFRERRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0126375_102065601	3300012948	Tropical Forest Soil	MRDRRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPALITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKETR*
Ga0126375_117759912	3300012948	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRSTYYYHGPSQELD
Ga0126375_119591291	3300012948	Tropical Forest Soil	MIITLKELSMRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSE
Ga0126369_103597212	3300012971	Tropical Forest Soil	MRDRPYLLLALLLGTLSLTCCARRAAPIDTGQPALIHPGMTEAEVVQRLGPPVLVTEQPSTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR*
Ga0157380_101238052	3300014326	Switchgrass Rhizosphere	MEELRMRDRQNLLLGFLLGVLILTGCARPTAPSAISLPNPIRPGMSEAEIVQLLGPPGLVMEQPAVRVSVPTPTGMAFHEKRRYTYYYLGPSQDLDTLITLEDGIVISTGKGTR*
Ga0157380_128473322	3300014326	Switchgrass Rhizosphere	MCDRRYLLVALLLGTLILTCCAHRSEPIDTRLPALIHPGLTEAEVVQRLGPPVLITEQPSARVQVPTPTGIEFREKRRYTYYYLGPSQ
Ga0180082_11576911	3300014880	Soil	ALQMEELRMRDRQNLLLGFLLGVLILTGCARPTAPSASSPPNPIRPGMSEAEIVQLLGPPGLVMEQPAVRVSVPTPTGIAFHEKRRYTYYYLGPSQDLDTLITLEDGVVISTGKGTR*
Ga0137418_101003384	3300015241	Vadose Zone Soil	LLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR*
Ga0132258_104762302	3300015371	Arabidopsis Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPTVIHPGMTEAEVVQHLGPPVLITEQPPARVRVPTPTGLEFREKRRYTYYYLGPSQDLDTQITLEDGVVISPGKGTR*
Ga0132258_118103891	3300015371	Arabidopsis Rhizosphere	MRDRRYLLLTLLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQFPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR*
Ga0182036_109735171	3300016270	Soil	MRDRRSYLLLALLLGTLALTCCARRSEPIDTRLPALIHPGMTEAEVVQRLGPPVLITEQPSTSVQVPTPMGIEFREKCRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR
Ga0182034_104791723	3300016371	Soil	CCARRSEPIDTRQPALIHTGMTEAEVVQRLGPPVLITEQPSTSVQVPTPMGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR
Ga0182038_110016021	3300016445	Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKKTR
Ga0187893_101515133	3300019487	Microbial Mat On Rocks	MRDRRYLLLTLLLGTLTLAGCARPSKPIDTRQPALIHALIHPGMAEAEVVERLGPPVLITEQPSTRVQVPTPTGLEFRDKRRYTYYYLGPSEDLDTVITLEDGVVINTRQGPR
Ga0126371_104535351	3300021560	Tropical Forest Soil	MRDRHYLILALLLGTLALTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTSVQVPTPMGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR
Ga0207712_100413143	3300025961	Switchgrass Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSTYVQVPTPTGIEFREKRRYTYYYLGPSQDPDTLITLEDGVVINTGKGTR
Ga0207675_1013212051	3300026118	Switchgrass Rhizosphere	MCDRRYLLVALLLGTLILTCCAHRSEPIDTRLPALIHPGLTEAEVVQRLGPPVLITEQPSARVQVPTPTGIEFREKRRYTYYYLGPSQELDTLITLEDGVVINRDKGTR
Ga0209814_100299202	3300027873	Populus Rhizosphere	MRDCRYFLLALLLSTLTLTCCTRRSEPIDTYQSAVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLENGVVIHTGKGTR
Ga0209814_102460931	3300027873	Populus Rhizosphere	MRDRCYLLLALLLGTLTLTCCARRSESIDTRQSEPIATRQSALIQPGMTEAEVVQRLGPPVLITEQPSAPVQVATPTGIEFREKHRYTYYYLGPSQELDTLINLEDGVVINTGKVTR
Ga0209465_102190941	3300027874	Tropical Forest Soil	MRDRRYYLLLALLLGTLSLTCCARRAAPIDSRQPALIHPGMTEAEVVQRLGPPVLVTEQPPTSVQVPTPTGIEFREKRRYTYYYLGPSEELDMLITLEDGVVIHTGKKTR
Ga0209481_101642361	3300027880	Populus Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLENGVVIHTGKGTR
Ga0209590_100308463	3300027882	Vadose Zone Soil	MRDRRYLLLALLLGTLTLPCCARRSEPIDTRPPALIHPGMTEAEVVQRLGPPVLITEQPSAHVQVPTPTGIEFREKRRYTYYYLDPSQDLDTLITLEDGVVIHTGKGTR
Ga0209590_100628183	3300027882	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPAHVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVILHTGQGTR
Ga0207428_103425933	3300027907	Populus Rhizosphere	MRDCRYLLLALLLSTLTLTCCARRSEPIDTYQSVVVHPGMTEAEVVERLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR
Ga0209382_100661534	3300027909	Populus Rhizosphere	MRDRRYLLLTLLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR
Ga0209382_100950022	3300027909	Populus Rhizosphere	MRDCRYLLLALLLGTLILTCCARRSEPIDTRQPALIHPGMTEAEVVQRLGPPVLITEQPSAPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR
Ga0209382_103529402	3300027909	Populus Rhizosphere	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYFGPSQDLDTLITLEDGVVIHTGKGTR
Ga0137415_100914732	3300028536	Vadose Zone Soil	MRDRRSLLLALLLGTLTLTCCARHSEPISSDTRQPDLIHPGMTEAEVVQRLGPPVLITEQPPARVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVVHTGQGTR
Ga0247828_101172282	3300028587	Soil	MRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQALDMLITLEDGVVVNPGQGTR
Ga0310887_109361611	3300031547	Soil	MRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVLIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR
Ga0310915_110516531	3300031573	Soil	MRDRRSYLLLALLLGTLALTCCARRSEPIDTRQPALIHPGMTEADVVQRLGPPVLITEQPSTSVQVPTPMGIEFREKRRYTYYYLGPSQELDTLITLEDGVVIHTGKKTR
Ga0310904_113936091	3300031854	Soil	MRDRRYFLLILLLGTLTLTYCARRSEPIDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQVPTTTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR
Ga0306926_118742801	3300031954	Soil	MRDCRYLLLALLLGTLTLTCCARRSEPIDTREPVLIHPGMTEAEVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTSIILEDGVVISTGKGTR
Ga0306920_1012446061	3300032261	Soil	LLGTLTLTCCARRSEPIDTREPVLIHPGRTEAKVVQRLGPPVLITEQPSMPVQVPTPTGIEFREKRRYTYYYLGPSQDLDTLITLEDGVVIHTGKGTR
Ga0314783_001584_11_340	3300034662	Soil	MRDRRYLLLTLLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGPSQDLDTLITLEDGVVINTGKGTR
Ga0314801_024269_681_1010	3300034676	Soil	MRDRRYFLLILLLGTLTLTCCARRSEPTDTRQPTLIHPGMTEAEVVQRLGPPVFIMEQPPAPVQVPTPTGMEFREKRRYTYYYLGQSQDLDMLITLEDGVVVNPGQGTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences