Metagenome / Metatranscriptome Family F055592

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055592
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	88 residues
Representative Sequence	PNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR
Number of Associated Samples	108
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	93.48 %
% of genes from short scaffolds (< 2000 bps)	95.65 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.826 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.493 % of family members)
Environment Ontology (ENVO)	Unclassified (30.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.95% β-sheet: 0.00% Coil/Unstructured: 39.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.2.0: automated matches	d4z9ha_	4z9h	0.78767
a.7.12.1: PhoU-like	d1vcta1	1vct	0.77995
a.24.2.0: automated matches	d2d4ua1	2d4u	0.7649
a.47.2.1: t-snare proteins	d1vcsa1	1vcs	0.76461
a.7.12.0: automated matches	d4q25a_	4q25	0.75869

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF14833	NAD_binding_11	22.46
PF02074	Peptidase_M32	17.39
PF01432	Peptidase_M3	7.97
PF01401	Peptidase_M2	7.25
PF13193	AMP-binding_C	1.45
PF13450	NAD_binding_8	0.72
PF00515	TPR_1	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	17.39
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	7.97
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	7.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.72 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.72 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Weeksellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae	0.72 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Chryseobacterium group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group	0.72 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Epilithonimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Epilithonimonas	0.72 %
Bacteroides pyogenes	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides pyogenes	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.64 %
Unclassified	root	N/A	2.17 %
Epilithonimonas caeni	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Epilithonimonas → Epilithonimonas caeni	0.72 %
Bacteroides pyogenes	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides pyogenes	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ8XV2H01BLV7B	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300000559\|F14TC_102911698	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300004114\|Ga0062593_103386539	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300004267\|Ga0066396_10112757	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300004281\|Ga0066397_10176752	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides pyogenes	504	Open in IMG/M
3300004463\|Ga0063356_105515985	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300004480\|Ga0062592_100934077	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300004633\|Ga0066395_10584297	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300004798\|Ga0058859_11531834	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300005172\|Ga0066683_10089089	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300005179\|Ga0066684_10257023	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300005184\|Ga0066671_10629180	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300005187\|Ga0066675_10559880	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005293\|Ga0065715_10699796	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300005295\|Ga0065707_10747513	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005331\|Ga0070670_101673462	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300005332\|Ga0066388_102713977	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300005332\|Ga0066388_102838907	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300005332\|Ga0066388_102940795	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005332\|Ga0066388_106811157	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300005332\|Ga0066388_106935662	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005332\|Ga0066388_107251226	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300005332\|Ga0066388_107483373	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005332\|Ga0066388_107998221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	529	Open in IMG/M
3300005354\|Ga0070675_101347358	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005446\|Ga0066686_10939284	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005450\|Ga0066682_10333265	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300005450\|Ga0066682_10571470	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005450\|Ga0066682_10831148	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005451\|Ga0066681_10513385	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300005459\|Ga0068867_100924714	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300005529\|Ga0070741_11624973	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005554\|Ga0066661_10324248	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300005598\|Ga0066706_10641871	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300005713\|Ga0066905_102050451	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Epilithonimonas → Epilithonimonas caeni	531	Open in IMG/M
3300005764\|Ga0066903_103403876	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300006034\|Ga0066656_10836546	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300006049\|Ga0075417_10286352	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300006796\|Ga0066665_10807532	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300006796\|Ga0066665_10940193	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300006796\|Ga0066665_11330544	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006797\|Ga0066659_10970799	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006797\|Ga0066659_11883481	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300006844\|Ga0075428_101220739	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300006845\|Ga0075421_101088851	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300006880\|Ga0075429_100580919	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300006903\|Ga0075426_11204623	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300006904\|Ga0075424_101468710	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006937\|Ga0081243_1294681	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300009038\|Ga0099829_11434199	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300009089\|Ga0099828_10928522	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300009094\|Ga0111539_11680314	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300009100\|Ga0075418_10474463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300009100\|Ga0075418_10626966	All Organisms → cellular organisms → Bacteria → Acidobacteria	1157	Open in IMG/M
3300009137\|Ga0066709_101083194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300009156\|Ga0111538_11260247	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300009162\|Ga0075423_11497667	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300009162\|Ga0075423_12330235	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300010046\|Ga0126384_11029648	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300010047\|Ga0126382_11474426	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300010047\|Ga0126382_11614003	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300010048\|Ga0126373_13259083	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010109\|Ga0127497_1072039	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300010132\|Ga0127455_1049931	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300010141\|Ga0127499_1102128	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300010142\|Ga0127483_1151891	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300010303\|Ga0134082_10204554	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300010326\|Ga0134065_10410095	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010333\|Ga0134080_10581780	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010336\|Ga0134071_10515763	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300010336\|Ga0134071_10755521	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010358\|Ga0126370_10448670	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300010359\|Ga0126376_12583961	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300010360\|Ga0126372_11499718	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300010360\|Ga0126372_13052539	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300010362\|Ga0126377_10844427	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300010366\|Ga0126379_10759919	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300010366\|Ga0126379_10870330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300010397\|Ga0134124_12356321	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300010398\|Ga0126383_13360779	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010868\|Ga0124844_1178728	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300011119\|Ga0105246_10451383	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300011120\|Ga0150983_12279399	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300011120\|Ga0150983_15215873	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300011425\|Ga0137441_1176996	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300012208\|Ga0137376_11742056	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012211\|Ga0137377_11784506	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300012356\|Ga0137371_10094677	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300012392\|Ga0134043_1206598	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300012399\|Ga0134061_1146113	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012930\|Ga0137407_11104326	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300012948\|Ga0126375_11138392	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300012948\|Ga0126375_11487998	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300012961\|Ga0164302_11588484	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012971\|Ga0126369_11789073	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300012971\|Ga0126369_12567815	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300012975\|Ga0134110_10430175	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012988\|Ga0164306_11487736	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300013308\|Ga0157375_11140674	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300014150\|Ga0134081_10211382	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300014745\|Ga0157377_10916911	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300014875\|Ga0180083_1039794	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300015358\|Ga0134089_10019163	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300015372\|Ga0132256_101031230	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300015372\|Ga0132256_102678679	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300015373\|Ga0132257_100974293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300015373\|Ga0132257_101095472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300015373\|Ga0132257_102911385	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300016357\|Ga0182032_11025220	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300016445\|Ga0182038_10710687	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300017656\|Ga0134112_10034146	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300017656\|Ga0134112_10358139	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300018431\|Ga0066655_10052224	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300018433\|Ga0066667_10765299	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300018433\|Ga0066667_11091096	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300018468\|Ga0066662_10535385	Not Available	1078	Open in IMG/M
3300022726\|Ga0242654_10360267	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300022726\|Ga0242654_10375944	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300022726\|Ga0242654_10418029	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300025930\|Ga0207701_11393357	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300026118\|Ga0207675_102149378	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300026314\|Ga0209268_1096072	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300026377\|Ga0257171_1087159	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300026538\|Ga0209056_10363837	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300026538\|Ga0209056_10363960	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300027873\|Ga0209814_10123060	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300027874\|Ga0209465_10040647	All Organisms → cellular organisms → Bacteria → Acidobacteria	2211	Open in IMG/M
3300027895\|Ga0209624_10724149	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300027909\|Ga0209382_10591490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1209	Open in IMG/M
3300031093\|Ga0308197_10401748	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300031474\|Ga0170818_108958697	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031820\|Ga0307473_10219049	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300031820\|Ga0307473_10518285	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300031962\|Ga0307479_11853501	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300032180\|Ga0307471_103968826	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300034667\|Ga0314792_224866	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.26%
Host-Associated	Host-Associated	21.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.81%
Plants	Host-Associated → Plants	21.01%
Aquatic	Environmental → Aquatic	1.45%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.80%
Sediment	Environmental → Aquatic → Sediment	1.45%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.04%
Loam	Environmental → Terrestrial → Soil → Loam	13.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006937	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_03991230	2170459007	Grass Soil	QAKVIEFGEKAIKVDPANIIALLTVTRAYSLDGKAASLDRAITYAQKAIAEIGKLKNGPPQQGYSDKDWKEYIGRNEDLANNYLSYAKSLKR
F14TC_1029116982	3300000559	Soil	SKSLREAFLQLVELYQQKNNSPKVIEYSEKVXXXXXXXXAALLKATYAYSLEGKAPSLXXALQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDSNEALAKNYLSYARSLKR*
Ga0062593_1033865392	3300004114	Soil	NLIALLTATRALSLDGKQASIERAIQYGTKAEAEIAKLKTGPPQQGYTDDQWKQYIGSNEELAKNYLSYARAMKR*
Ga0066396_101127571	3300004267	Tropical Forest Soil	AENNPDAKIALLLDFEKQYAQSKAVREAYSQLIELYQGKNNSAKVIEYSEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0066397_101767521	3300004281	Tropical Forest Soil	QSKALREAYSQLIELYQGKNNSAKVIEYSEKILKLDPVNIPALLRATYAYTLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0063356_1055159852	3300004463	Arabidopsis Thaliana Rhizosphere	SLDRAIQYGQKAVDEVTKLKGGPPQQGYTDDQWKQYIDSNEALAKNYLSYARSLRK*
Ga0062592_1009340771	3300004480	Soil	YSEKALKVDPANLVALLTATRAYSLEGKQASLDRAIQYGTKAEAEIAKLKTGPPQQGYTDDQWKEYVKSNEELAKNYLAYARALKR*
Ga0066395_105842971	3300004633	Tropical Forest Soil	VNIPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0058859_115318342	3300004798	Host-Associated	YSEKVLKVDPGNLAALLKATYALALEGKTASLDRAIQYGQKAVDEVTKLKGAPPQQGYTDDQWKQYIDSNEQLAKNYLSYARSLRK*
Ga0066683_100890891	3300005172	Soil	QSRSIREAYLQLIQIYQQKNDQAKVVEYCEKAIKVDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR*
Ga0066684_102570232	3300005179	Soil	TLARAYSLDGKAASLDRAIQYGQKAMDEITKMKGQPPQQGYTDEQWKQYIDSNAQLANSYLAYARSLKR*
Ga0066671_106291801	3300005184	Soil	QKNDQTKVIEYCEKAIKIDPSNLVALLTVTRAYSLDGKQASLDRAIQYGEKAVTEITRMKSQPPQQGYTDEQWKQYIDSNDQLAKSYLAYARSLKR*
Ga0066675_105598802	3300005187	Soil	VDPNNLVALLTLARAYSLDGKAASLARAIQYGQKAMDEITKMKGQPPQQGYTDEQWKQYIDSNAQLANSYLAYARSLKR*
Ga0065715_106997961	3300005293	Miscanthus Rhizosphere	KQASLDRAIQYGQKAEAEIAKLKSGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR*
Ga0065707_107475131	3300005295	Switchgrass Rhizosphere	PASLDRAIQYGQKAVDEITRLKSSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0070670_1016734622	3300005331	Switchgrass Rhizosphere	LEGKAPSLDKALQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDSNEALAKNYLSYARSLRR*
Ga0066388_1027139771	3300005332	Tropical Forest Soil	TYAYSLEGKPTSLDRAIQYGQKAVDEITKLKGGPPQQGYTDEQWKQYIDNNDQLAKSYLSYARSLKR*
Ga0066388_1028389072	3300005332	Tropical Forest Soil	NNSAKVIEYSEKVLKVDPNNIPALLKATYAYSLEGKPASLDRAIQYGQKAVDEITKLKTGPPQQGYTDEQWKQYIDNNDQLAKSYLSYARSLKR*
Ga0066388_1029407951	3300005332	Tropical Forest Soil	LREALLQLVQLYQVKNDSPKVIEYSEKTLKVDPSNLVALLTATRAYSLDGKAASIDRAIQYGTKAEAEIAKLKSSPPQQGYTDDQWKQYITANEQLAKNYLSYARALKR*
Ga0066388_1068111572	3300005332	Tropical Forest Soil	PASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDGNEQLAKNYLSYARSLKR*
Ga0066388_1069356622	3300005332	Tropical Forest Soil	AYLQLLQLYQQKNESPKIIEYCEKTLKVDPVNLVALLTGARAYSLEGKQASIDRAIQYAQKAEAEIAKLKSGPPQQGYTDDQWKQYIVSNEELAKNYLSYARALKR*
Ga0066388_1072512262	3300005332	Tropical Forest Soil	VIEFGEKTVKLEPSNLTALLTLTHAYSLEGKAASLDKAIQYAQKAIDEITKLKSGPPQQGYTDEQWKQLLDSNDQLAKNYLNYARSLKR*
Ga0066388_1074833732	3300005332	Tropical Forest Soil	VIEFGEKTVKLEPTNLTALLTLTHAYSLEGKAASLDKAIQYAQKAIDEITKLKSGPPQQGYTDEQWKQLLDSNDQLAKNYLNYARSLKR*
Ga0066388_1079982211	3300005332	Tropical Forest Soil	ENNVDSKIALLLDFEKQFPQSKALREAYLQLLQIYLQKNDQVKVIESGEKVLKVDQVNIEALLAVTRAYSLDGKNASLEKAIQYAQKAIDQLGKMKSQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0070675_1013473581	3300005354	Miscanthus Rhizosphere	LYQQKNESPKIIEYSEKTLKVDPSNLIALLTATRAYSLDGKQASIHRAIQYGTKAEAEIAKMKTGPPQQGYTDDQWKQYVDSNEQLAKNYLSYARALKR*
Ga0066686_109392841	3300005446	Soil	NLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066682_103332652	3300005450	Soil	QDFEKQFTQSKSIREAYLQLIQIFQQKNDQAKIIEYCEKAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQKAMDEITRLKSQPPQQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0066682_105714701	3300005450	Soil	PNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066682_108311481	3300005450	Soil	PNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066681_105133852	3300005451	Soil	IREAYMQLIQIYSQKNDQAKVIEYCEKAIKVDPANLVALLTVTRAYSLDGKAASLDRALQYGQKAVDEITRMKGQPPQQGYTDEQWKQYIDNNAQLANSYLAYARNLKR*
Ga0068867_1009247141	3300005459	Miscanthus Rhizosphere	IKVDPNNLVALLTVTRALSLEGKSASLDRAILYAQKAVDEIAKLKGGPPQQGYTDEQWKQYIDSNDQLAKSYLAYARSLKR*
Ga0070741_116249732	3300005529	Surface Soil	ASLDRAIQYGQKAVDQVAKLKAQPPQQGFTDEQWKQYIDSNDQLAKTYLSYAQSMKR*
Ga0066661_103242481	3300005554	Soil	YLQLIQIFQQKNDQAKIIEYCEKAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQKAMDEITRLKSQPPQQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0066706_106418712	3300005598	Soil	GKAASLDRAIQYGQKAMDEITKMKGQPPQQGYTDEQWKQYIDSNAQLANSYLAYARSLKR
Ga0066905_1020504511	3300005713	Tropical Forest Soil	DAENNADAKIALLLDFEKQFAQSKALREAYSQLIELYQGKNNSAKVIEYSEKILKLDPVNIPALLRATYAYTLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0066903_1034038761	3300005764	Tropical Forest Soil	RATYAYTLEGKPASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYAKSLKR*
Ga0066656_108365462	3300006034	Soil	QQKNDQAKIIEYCEKAIKLDPNNLVALLTVTRAYSLDGKQASLDRAIQYGERAMNEITRLKSQPPQQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0075417_102863522	3300006049	Populus Rhizosphere	AYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0066665_108075321	3300006796	Soil	PNNLVALLTVTRAYSLDGKQASLDRAIQYGERAMNEITRLKSQPPQQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0066665_109401931	3300006796	Soil	NNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066665_113305441	3300006796	Soil	NNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066659_109707992	3300006797	Soil	LLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0066659_118834811	3300006797	Soil	IEFGEKALKADPANIEAMLAVTRAYSLDGKNASLDKAIQYAQKTIEQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKSYLAYARSLKR*
Ga0075428_1012207391	3300006844	Populus Rhizosphere	FPQSPALREAFLQLLQLYSVKNESPKVIEYSEKTLKLEPTNIIALLTATRAYSLDGKQASLDRAIQYGQKAEAEIAKLKSGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR*
Ga0075421_1010888512	3300006845	Populus Rhizosphere	LLRATYAYSLEGKPASLDRAIQYGQKAVDEITRLKSSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0075429_1005809191	3300006880	Populus Rhizosphere	LEGKPASLDRAIQYGQKAMDEITRLKTSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0075426_112046232	3300006903	Populus Rhizosphere	ELYQGKNNSVKVIEYSEKVLKVDPNNIPALLKATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDEQWRQYIDNNDQLAKSYLSYARSLKR*
Ga0075424_1014687101	3300006904	Populus Rhizosphere	ESNPDAKIGLLLEFEKQFAQSKALRDAYLQLVELYQGKNNSVKVIEYSEKVLKVDPNNIPALLKATYAYSLEGKPGSLDRAIQYGQKAVDEITKLKSGPPQQGYTDEQWRQYIDNNDQLAKSYLSYARSLKR*
Ga0081243_12946811	3300006937	Tropical Rainforest Soil	LKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0099829_114341992	3300009038	Vadose Zone Soil	EFGEKALKADPSNIDALLAVTRAYSLDGKSASLDRAIQYAQRAIDQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0099828_109285222	3300009089	Vadose Zone Soil	VQIYQQKNDQAKLIEFGEKTLKVDPSNIDALLAVTRAYSLDGKSASLDRAIQYAQKAIDQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0111539_116803141	3300009094	Populus Rhizosphere	AYSLEGKPASLDRAIQYGQKAMDEITRLKTSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0075418_104744632	3300009100	Populus Rhizosphere	VIEYSEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAMDEITRLKTSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0075418_106269661	3300009100	Populus Rhizosphere	AYSLDGKQASLDRAIQYGQKAEAEIAKLKSGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR*
Ga0066709_1010831941	3300009137	Grasslands Soil	YCEKTIKVDPANLVALLTVTRAYSLDGKAASLDRALQYGQKAVDEITRMKGQPPQQGYTDEQWKQYIDNNAQLANSYLAYARNLKR*
Ga0111538_112602472	3300009156	Populus Rhizosphere	QLLQLYQTKNESPKIIEYSEKTLKLDPNNIVALLTATRAYSLDGKQASLDRAIQYGTKAEAEIAKLKGGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR*
Ga0075423_114976671	3300009162	Populus Rhizosphere	ASLDRAIQYGQKAMDEITRLKTSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0075423_123302352	3300009162	Populus Rhizosphere	ATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDEQWRQYIDNNDQLAKSYLSYARSLKR*
Ga0126384_110296481	3300010046	Tropical Forest Soil	KNASLDKAIQYAQKAIDQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0126382_114744261	3300010047	Tropical Forest Soil	PALLKATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDEQWKQYIDNNDQLAKSYLSYARSLKR*
Ga0126382_116140032	3300010047	Tropical Forest Soil	DAENNADAKIALLLDFEKQFAQSKALRDAYLQLIELYQGKNNSPKVIEYSEKILKVEPLNISALLRATYAYTLEGKPASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYAKSLKR*
Ga0126373_132590831	3300010048	Tropical Forest Soil	LLDFEKQFAQSKALREAYLQLIELYQGKNNSAKVIEYSEKILKVDPVNIPALLRATYAYTLEGKPASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0127497_10720391	3300010109	Grasslands Soil	PNNLVALLTATRAYSLEGKQSNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0127455_10499312	3300010132	Grasslands Soil	VDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYARTLKR*
Ga0127499_11021281	3300010141	Grasslands Soil	IEYCEKAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0127483_11518911	3300010142	Grasslands Soil	QAKVVEYCEKAIKVDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR*
Ga0134082_102045541	3300010303	Grasslands Soil	NLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0134065_104100952	3300010326	Grasslands Soil	DPNNLVALLTVTRAYSLDGKQASLDRAIQYGQKAMDEITRLKSQPPQQGYTDEQWKQYIESNAQLANTYLAYAKTLKR*
Ga0134080_105817801	3300010333	Grasslands Soil	KLIEFGEKTLKVDPSNIDALLAVTRAYSLDGKAASLDRAIQYAQRAIDQLGKMKAQPAQQGKTDEQWKQYIEGNEGLARNYLNYAKSLRP*
Ga0134071_105157631	3300010336	Grasslands Soil	DPGNLPALLKATYAYSLEGKPTSLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIESNEGLAKNYLSYARSLKR*
Ga0134071_107555211	3300010336	Grasslands Soil	NNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEIMKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0126370_104486701	3300010358	Tropical Forest Soil	FEKQFPQSKSIRDAYLQLLQIYLQKNDQVKVIESGEKVLKVDQVNIEALLAVTRAYSLDGKNASLDKAIQYAQKAIDQLGKMKSQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0126376_125839612	3300010359	Tropical Forest Soil	DAKIALLLDFEKQFAQSKALKEAYLQLVELYQQKNNSPKVIEYSEKILKLDPNNIPALLKATYAYSLEGKPNSLDRAIQYGQKAMDEITKLKGGPPQQGYTDDQWKQYVDSNDQLAKSYLAYARSLKR*
Ga0126372_114997181	3300010360	Tropical Forest Soil	SKVVREAYSQLIELYQGKNNSAKVIEYSEKILKLDPVNIAALLRATYAYSLEGKPASLDRAIQYGQKAMDEITRLKSSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0126372_130525391	3300010360	Tropical Forest Soil	TRAYSLDGKTGSLDRAIQYGEKAVGEIAKMKTQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARSLKR*
Ga0126377_108444272	3300010362	Tropical Forest Soil	DSESSPDGKITLLLAFEKEFAQSPALREALLQLVQLYQQKNDSPKVIEYSEKVLKLEPANLVALLTATRAYSMDGKQASIDRAIQYGTKAEAEIGKLKGSPPQQGYTDDQWKEYINSNAELAKNYLSYAKALKR*
Ga0126379_107599191	3300010366	Tropical Forest Soil	EYGEKTIKLDPNNLIALLTVTRAYSLDGKAASLDRAIAYAQKAVDEIAKLKAGPPQQGYTDEQWREYIKSNDDLAKNYLAYARSLKR*
Ga0126379_108703301	3300010366	Tropical Forest Soil	KPASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYAKSLKR*
Ga0134124_123563211	3300010397	Terrestrial Soil	LEGKTASLDRAISYAQKAIDQIAKLKSGPPQQGYTDEQWKQYIEGNDQRAKNYLSYAKALKR*
Ga0126383_133607792	3300010398	Tropical Forest Soil	QTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYARTLKR*
Ga0124844_11787282	3300010868	Tropical Forest Soil	ADAKIALLLDFEKQFAQSKALREAYLQLIELYQGKNNSGKVIEYSEKILKVDPVNIPALLRATYAYTLEGKPASLDRAIQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0105246_104513831	3300011119	Miscanthus Rhizosphere	DSPKIIEYSEKIIKVDPNNLVALLTVTRAYSLEGKTASLDRAIVYAQKAVDEIAKLKSGPPQQGYTDEQWKQYIDSNDQLAKSYLAYARSLKR*
Ga0150983_122793991	3300011120	Forest Soil	KAEPSNIDALLAVTRAYSLDGKSASLDRAIQYAQKAIDQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0150983_152158731	3300011120	Forest Soil	QFPQSKAVREADLQLMDIYQQKNDSGKIIEYGEKVIKIDGENLVALLTLSRAYSTLDGKAASLDRAIQYAQKAVDYLTKLKGMPPQQGYTDDQWRKYVSDSEGTAKAYLAYARSLKR*
Ga0137441_11769962	3300011425	Soil	KTLKIDPGNLVALLTATRAYSLEGKPASVDRAIQYATRAEAEIAKLKSGPPQQGYSDADWKRYIESNEGLAKNYLSYARALKR*
Ga0137376_117420561	3300012208	Vadose Zone Soil	KAIRETYLQLVQIYQQKNDQVKVIEFGEKALKADPANIEAMLAVTRAYSLDGKNASLEKAIQLAQKAIDQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLRR*
Ga0137377_117845062	3300012211	Vadose Zone Soil	EQKNLDRALQYAQKAVDIATRMKSQPPPAGYSDEQWKQYIEGNEGLAKNYLSYARSLRP*
Ga0137371_100946773	3300012356	Vadose Zone Soil	VTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0134043_12065982	3300012392	Grasslands Soil	VTRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYARTLKR*
Ga0134061_11461132	3300012399	Grasslands Soil	KQASLDRAIQYGERAMTEITRLKSQPPEQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0137407_111043261	3300012930	Vadose Zone Soil	LDGKNASLDKAIQYAQKTIEQLGKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLRR*
Ga0126375_111383921	3300012948	Tropical Forest Soil	FAQSKALREAYLQLVELYQQKNNSPKVIEYSEKILKVDPSNLAALLKAAYAYSLEGKPASLERANQYAQKAVDELTKLKSGPPQQGYTDEQWRQYIDSNEQLAKNYLNYTRSLKR*
Ga0126375_114879982	3300012948	Tropical Forest Soil	LLLEFEKQFPQSAALREALLQLVQLYQEKNDSPKVIEYSEKTLKVDPSNLVALLTATRAYSLDGKAASIDRAIQYGTKAEAEIAKLKSSPPQQGYTDDQWKQYITANEQLAKNYLSYARALKR*
Ga0164302_115884841	3300012961	Soil	SAKVIEYSEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAMDEITRLKSSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0126369_117890731	3300012971	Tropical Forest Soil	QIYLQKNDQVKVIESGEKVLQVDQVNIEALLAVTRAYSLEGKNASLDKAIQYAQKAIDQLGKMKSQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR*
Ga0126369_125678152	3300012971	Tropical Forest Soil	PALREAYLQLVELYQGKNNGAKVIEYSEKVLKVDPNNLAALLKATYAYALEGKSASLDRAIQYGQKAVDEVAKLKSGPPQQGYTDDQWKQYIESNEGLAKNYLSYAKSLKR*
Ga0134110_104301751	3300012975	Grasslands Soil	KAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQKAMDEITRLKSQPPQQGYTDEQWKQYIESNAQLANSYLAYAKTLKR*
Ga0164306_114877361	3300012988	Soil	YAYSLEGKSASLDRAIQYGQKAVDEIAKLKSGPPQQGYTDDQWKQYIESNEGLAKNYLSYAKSLKR*
Ga0164305_121671091	3300012989	Soil	NIVALLALTRAYSLDGKAASLDRAIAYSQKAIDECAKMKNSPPQQGYTDAQWKDVVDGYDKLAKNYQSYAKSLKR*
Ga0157375_111406741	3300013308	Miscanthus Rhizosphere	LKVDPGNLAALLKATYALALEGKTASLDRAIQYGQKAVDEVTKLKGAPPQQGYTDDQWKQYIDSNEQLAKNYLSYARSLRK*
Ga0134081_102113822	3300014150	Grasslands Soil	VDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR*
Ga0157377_109169112	3300014745	Miscanthus Rhizosphere	YQQKNNSPKVIEYSEKVLKVDPNNIPALLKATYAYSLEGKAPSLDKALQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDSNEALAKNYLSYAKSLRR*
Ga0180083_10397941	3300014875	Soil	EALLQLLQLYQLKDESPKIIEYSEKTLKLDPSNLVALLTATRAYSLEGKPSSVERAIQYATKAQAEIAKMKGGPPQQGYTDDQWRQYIDSNEQLAKNYLSYARALKR*
Ga0134089_100191633	3300015358	Grasslands Soil	IEYCEKAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR*
Ga0132258_136775052	3300015371	Arabidopsis Rhizosphere	DPNNIVALLALTRAYSLDGKAASLDRAIAYSQKAIDECAKMKNSPPQQGYTDAQWKDVVDGYDKLAKNYQSYAKSLKR*
Ga0132256_1010312302	3300015372	Arabidopsis Rhizosphere	QASIDRAIQYGTKAEAEIGKLKGSPPQQGYTDDQWKEYINSNAELAKNYLSYARALKR*
Ga0132256_1026786791	3300015372	Arabidopsis Rhizosphere	SEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAMDEITRLKTSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR*
Ga0132257_1009742932	3300015373	Arabidopsis Rhizosphere	GKITLLLDFEKQFPQSKALREAFLQLVELYQQKNNSPKVIEYSEKVLKVDPGNLAALLKATYALALEGKTASLDRAIQYGQKAVDEVTKLKGAPPQQGYTDDQWKQYIDSNKQLAKNYLSYARSLRK*
Ga0132257_1010954721	3300015373	Arabidopsis Rhizosphere	LQLYQTKNESPKIIEYSEKTLKLDPNNIVALLTATRAYSLDGKQASLDRAIQYGTKAEAEIAKLKGGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR*
Ga0132257_1029113851	3300015373	Arabidopsis Rhizosphere	KNDSPKVIEYSEKVLKLDPANLVALLTAARAYTMDGKQASIDRAIQYGTKAEAEIGKLKGSPPQQGYTDDQWKEYINSNAELAKNYLSYARALKR*
Ga0182032_110252202	3300016357	Soil	LDGKTGSLDRAIQYGEKAVGEIAKMKTQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARSLKR
Ga0182038_107106871	3300016445	Soil	KAIKIDPNNIVALLTVTRAYSLDGKNASLDRAIAYAQKALDECGKLKNAPPQQGYTDKDWKAYVSSNEDLAKNYLSYAKSLKR
Ga0134112_100341463	3300017656	Grasslands Soil	YQQKNDQAKVIEYCEKAIKVDPNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR
Ga0134112_103581392	3300017656	Grasslands Soil	ERKNLDRAVQYAQKAVDIAARMKSQPPPAGYSDEQWKQYLDGNEQLAKNYLSYARSLRP
Ga0066655_100522243	3300018431	Grasslands Soil	EKQFAQSRSIREAYLQLIQIYQQKNDQAKVVEYCEKAIKVDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR
Ga0066667_107652991	3300018433	Grasslands Soil	TLSRAYALERKNLDRAVQYAQKAVDIAARMKSQPPPAGYSDEQWKQYVDGNEQLAKNYLSYARSLKP
Ga0066667_110910961	3300018433	Grasslands Soil	VDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR
Ga0066662_105353851	3300018468	Grasslands Soil	NNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR
Ga0242654_103602672	3300022726	Soil	LDGKSASLDRAIQYAQKAIDQLGKMKSQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR
Ga0242654_103759442	3300022726	Soil	EAYLQLVQIYQQKNDQAKLIEFGEKTLKVDPSNIDALLAVTRAYSLDGKAASLDRAIQYAQKAIDQLGKLKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR
Ga0242654_104180292	3300022726	Soil	LLAVTRAYSLDGKAVSLDRAIQYAQKTIDQLVKMKAQPAQQGKTDEQWKQYIDSNDQLAKTYLSYAQSLKR
Ga0207701_113933571	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LLDFEKQFPQSPALREAFLQLLQLYQTKNESPKIIEYSEKTLKLDPNNIVALLTATRAYSLDGKQASLDRAIQYGTKAEAEIAKLKGGPPQQGYTDDQWKQYITDNEQLAKNYLSYARALKR
Ga0207675_1021493781	3300026118	Switchgrass Rhizosphere	YSEKTLKVDPSNLIALLTATRAYSLDGKQASLDRAIQYGTKAEAEIAKMKTGPPQQGYTDDQWKQYIDSNEQLAKNYLSYARSLRK
Ga0209268_10960722	3300026314	Soil	QFAQSRSIREAYLQLIQIYQQKNDQAKVVEYCEKAIKVDPNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR
Ga0257171_10871591	3300026377	Soil	LLKATYAYSLEGKSASLDRAIQYGQKAVDEIAKLKSGPPQQGYTDDQWKQYIESNEGLAKNYLSYVKSLRPNK
Ga0209056_103638371	3300026538	Soil	PNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSSPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR
Ga0209056_103639601	3300026538	Soil	PNNLVALLTVTRAYSLDGKQASLDRAIQYGQRAMDEITKLKSQPPQQGYTDEQWKQYIESNDQLAKSYLSYAKTLKR
Ga0209814_101230602	3300027873	Populus Rhizosphere	IPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR
Ga0209465_100406473	3300027874	Tropical Forest Soil	EYSEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITKLKSGPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR
Ga0209624_107241492	3300027895	Forest Soil	SRAYSLEGKSAGLDRAIQCAQKAVDYLTKLKGLPPQQGLTDDQWKKYVADNEGTAKQYLAYARSLKR
Ga0209382_105914902	3300027909	Populus Rhizosphere	KNNSAKVIEYSEKILKLDPVNIPALLRATYAYSLEGKPASLDRAIQYGQKAVDEITRLKSSPPQQGYTDDQWKQYIDNNEQLAKNYLSYARSLKR
Ga0308197_104017481	3300031093	Soil	QLVQIYQQKNESPKIIEYSEKIIKLDPNNLVALLTVTRAYSLEGKSASLDRAIQYAQKAVDEIAKLKSSPPQQGYTDEQWKQYIDSNDQLAKSYLAYARSLKR
Ga0170818_1089586971	3300031474	Forest Soil	DAENNVDSKIALLLDFEKQFPQSKALRDAYLQLLEIYQQKNDQGKVIEVGEKVLTVDQANIEALLAVTRAYSLDGKNASLEKAIQYAQKAIAQLGKMKAQPAQQGKTDEQWKQYVDSNDQLAKTYLSYAQSLKR
Ga0307473_102190491	3300031820	Hardwood Forest Soil	RAYSLDGKAASLDRAIQYGQKAMDEITKMKGQPPQQGYTDEQWKQYIDSNAQLANSYLAYARSLKR
Ga0307473_105182851	3300031820	Hardwood Forest Soil	PNNLMALLTATRAYSLEGKQTNLDRAIQYGEKAMNEITKLKSQPPQQGYTDEQWKQYIDSNDQLAKSYLSYARTLKR
Ga0307479_118535011	3300031962	Hardwood Forest Soil	RAYSLDGKQASLDRAIQYGEKAVTEITRMKSSPPQQGYTDEQWKQYIDSNDQLAKTYLAYARSLKR
Ga0307471_1039688261	3300032180	Hardwood Forest Soil	AENSPDGKITLLLDFEKQFPQSKAIREAFLQLVELYQQKNNSPKVIEYSEKVLKVDPGNLAALLKATYALALEGKTASLDRAIQYGQKAVDEVTKLKGGPPQQGYTDDQWKQYIDSNEALAKNYLSYARSLRK
Ga0314792_224866_2_232	3300034667	Soil	NNIPALLKATYAYSLEGKAPSLDKALQYGQKAMDEITKLKSGPPQQGYTDDQWKQYIDSNEALAKNYLSYAKSLKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055592

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences