Metagenome / Metatranscriptome Family F055582

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055582
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	69 residues
Representative Sequence	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
Number of Associated Samples	117
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.70 %
% of genes near scaffold ends (potentially truncated)	23.19 %
% of genes from short scaffolds (< 2000 bps)	87.68 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.884 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.928 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.07% β-sheet: 0.00% Coil/Unstructured: 54.93%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04542	Sigma70_r2	13.04
PF00069	Pkinase	5.07
PF00027	cNMP_binding	3.62
PF07992	Pyr_redox_2	2.17
PF13529	Peptidase_C39_2	0.72
PF13673	Acetyltransf_10	0.72
PF01946	Thi4	0.72
PF02826	2-Hacid_dh_C	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	20.29
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	13.04
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	13.04
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	13.04
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	13.04
COG1635	Thiazole synthase/Archaeal ribulose 1,5-bisphosphate synthetase	Carbohydrate transport and metabolism [G]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	98.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	98.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.70 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.70 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.70 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.70 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.17 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.70 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.45 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17461398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1258	Open in IMG/M
2166559005\|cont_contig28410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1106	Open in IMG/M
2170459006\|GBPF9FW01AP8UH	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
2170459007\|GJ61VE201B0GP8	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
2170459009\|GA8DASG01C8XN5	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
2209111022\|2221209999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	920	Open in IMG/M
3300002899\|JGIcombinedJ43975_10001447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3646	Open in IMG/M
3300004114\|Ga0062593_102620615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	573	Open in IMG/M
3300004114\|Ga0062593_103534660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300004480\|Ga0062592_102368997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
3300005166\|Ga0066674_10020420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2856	Open in IMG/M
3300005167\|Ga0066672_10901185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300005171\|Ga0066677_10010488	All Organisms → cellular organisms → Bacteria	3999	Open in IMG/M
3300005171\|Ga0066677_10320042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300005174\|Ga0066680_10112478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1677	Open in IMG/M
3300005179\|Ga0066684_10066412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2120	Open in IMG/M
3300005180\|Ga0066685_10738438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	672	Open in IMG/M
3300005187\|Ga0066675_11212614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300005289\|Ga0065704_10700822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300005293\|Ga0065715_10901929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	574	Open in IMG/M
3300005355\|Ga0070671_100930644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	760	Open in IMG/M
3300005434\|Ga0070709_10855247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300005435\|Ga0070714_100355462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1376	Open in IMG/M
3300005436\|Ga0070713_100289504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1505	Open in IMG/M
3300005436\|Ga0070713_101887262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300005440\|Ga0070705_101915039	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	505	Open in IMG/M
3300005455\|Ga0070663_101939358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300005467\|Ga0070706_100032241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4833	Open in IMG/M
3300005467\|Ga0070706_100743580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	909	Open in IMG/M
3300005468\|Ga0070707_100373471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1385	Open in IMG/M
3300005535\|Ga0070684_101095525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	748	Open in IMG/M
3300005558\|Ga0066698_10328806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1057	Open in IMG/M
3300005560\|Ga0066670_10172780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1281	Open in IMG/M
3300005764\|Ga0066903_102728374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300006796\|Ga0066665_11407447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300006797\|Ga0066659_11325410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300007255\|Ga0099791_10334985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	724	Open in IMG/M
3300007258\|Ga0099793_10209777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	935	Open in IMG/M
3300009012\|Ga0066710_100548458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1749	Open in IMG/M
3300009012\|Ga0066710_102448911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	756	Open in IMG/M
3300009137\|Ga0066709_101325833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1053	Open in IMG/M
3300009137\|Ga0066709_101427991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1004	Open in IMG/M
3300010304\|Ga0134088_10037960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2189	Open in IMG/M
3300010323\|Ga0134086_10201216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300010323\|Ga0134086_10259571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	664	Open in IMG/M
3300010335\|Ga0134063_10174982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1003	Open in IMG/M
3300010337\|Ga0134062_10065375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1509	Open in IMG/M
3300010362\|Ga0126377_13318710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
3300010364\|Ga0134066_10065366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	975	Open in IMG/M
3300010364\|Ga0134066_10291144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300010373\|Ga0134128_12831856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300012189\|Ga0137388_11062805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	746	Open in IMG/M
3300012198\|Ga0137364_10132754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1786	Open in IMG/M
3300012198\|Ga0137364_10611252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	821	Open in IMG/M
3300012198\|Ga0137364_10640839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300012199\|Ga0137383_10005024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	8472	Open in IMG/M
3300012200\|Ga0137382_10112051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1813	Open in IMG/M
3300012200\|Ga0137382_10727636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	712	Open in IMG/M
3300012201\|Ga0137365_10001464	All Organisms → cellular organisms → Bacteria	18343	Open in IMG/M
3300012201\|Ga0137365_10061269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2841	Open in IMG/M
3300012201\|Ga0137365_10241672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1344	Open in IMG/M
3300012202\|Ga0137363_10622267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	912	Open in IMG/M
3300012202\|Ga0137363_11552610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	554	Open in IMG/M
3300012203\|Ga0137399_11666843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300012204\|Ga0137374_10286725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1359	Open in IMG/M
3300012204\|Ga0137374_10399514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1093	Open in IMG/M
3300012205\|Ga0137362_11710898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300012206\|Ga0137380_11481673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300012208\|Ga0137376_10806444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	808	Open in IMG/M
3300012210\|Ga0137378_11245920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	660	Open in IMG/M
3300012353\|Ga0137367_10194319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1472	Open in IMG/M
3300012353\|Ga0137367_10688112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	712	Open in IMG/M
3300012354\|Ga0137366_10080875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2471	Open in IMG/M
3300012355\|Ga0137369_10913126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	589	Open in IMG/M
3300012358\|Ga0137368_10604705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	696	Open in IMG/M
3300012360\|Ga0137375_10335633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1349	Open in IMG/M
3300012361\|Ga0137360_10227015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1524	Open in IMG/M
3300012362\|Ga0137361_10095140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2579	Open in IMG/M
3300012683\|Ga0137398_10604233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	759	Open in IMG/M
3300012915\|Ga0157302_10352368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300012917\|Ga0137395_10342169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1065	Open in IMG/M
3300012918\|Ga0137396_10210248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1431	Open in IMG/M
3300012922\|Ga0137394_10204579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1686	Open in IMG/M
3300012922\|Ga0137394_10324201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1316	Open in IMG/M
3300012923\|Ga0137359_11663381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	526	Open in IMG/M
3300012924\|Ga0137413_10178543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1411	Open in IMG/M
3300012925\|Ga0137419_10220126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1416	Open in IMG/M
3300012925\|Ga0137419_10251499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1332	Open in IMG/M
3300012929\|Ga0137404_10916610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	799	Open in IMG/M
3300012929\|Ga0137404_11396865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	646	Open in IMG/M
3300012944\|Ga0137410_10367405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1153	Open in IMG/M
3300012972\|Ga0134077_10283023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300012986\|Ga0164304_11478514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300014154\|Ga0134075_10590940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300014166\|Ga0134079_10490097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300014968\|Ga0157379_10864912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	856	Open in IMG/M
3300015264\|Ga0137403_10401308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1251	Open in IMG/M
3300017656\|Ga0134112_10465159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	531	Open in IMG/M
3300018027\|Ga0184605_10007054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4159	Open in IMG/M
3300018028\|Ga0184608_10357776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	640	Open in IMG/M
3300018054\|Ga0184621_10071358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1195	Open in IMG/M
3300018061\|Ga0184619_10280113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	765	Open in IMG/M
3300018071\|Ga0184618_10096140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1155	Open in IMG/M
3300018482\|Ga0066669_11523110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	608	Open in IMG/M
3300019866\|Ga0193756_1003634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1766	Open in IMG/M
3300019866\|Ga0193756_1042524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300019996\|Ga0193693_1037751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	819	Open in IMG/M
3300020004\|Ga0193755_1177547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	626	Open in IMG/M
3300020170\|Ga0179594_10043474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1492	Open in IMG/M
3300021080\|Ga0210382_10028547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2080	Open in IMG/M
3300021178\|Ga0210408_10439425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1039	Open in IMG/M
3300021411\|Ga0193709_1010810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2266	Open in IMG/M
3300021418\|Ga0193695_1005864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2336	Open in IMG/M
3300022530\|Ga0242658_1045568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	910	Open in IMG/M
3300022531\|Ga0242660_1083566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	756	Open in IMG/M
3300022726\|Ga0242654_10134104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	812	Open in IMG/M
3300025915\|Ga0207693_10083759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2498	Open in IMG/M
3300025916\|Ga0207663_10354487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1111	Open in IMG/M
3300025928\|Ga0207700_10407829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1192	Open in IMG/M
3300025939\|Ga0207665_10032331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3464	Open in IMG/M
3300026308\|Ga0209265_1022398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1959	Open in IMG/M
3300026323\|Ga0209472_1251138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300026489\|Ga0257160_1050826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300026529\|Ga0209806_1268802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	573	Open in IMG/M
3300026547\|Ga0209156_10224477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	886	Open in IMG/M
3300026550\|Ga0209474_10113000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1811	Open in IMG/M
3300026550\|Ga0209474_10216602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1209	Open in IMG/M
3300026689\|Ga0208579_102983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300028536\|Ga0137415_10484183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300028811\|Ga0307292_10248033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300030923\|Ga0138296_1011925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1290	Open in IMG/M
3300031231\|Ga0170824_111647451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M
3300031446\|Ga0170820_15960203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300031469\|Ga0170819_10233263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	955	Open in IMG/M
3300031716\|Ga0310813_10228815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1538	Open in IMG/M
3300033475\|Ga0310811_10402198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1498	Open in IMG/M
3300034680\|Ga0370541_013879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	846	Open in IMG/M
3300034681\|Ga0370546_014882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	971	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.65%
Host-Associated	Host-Associated	3.62%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.30%
Aquatic	Environmental → Aquatic	4.35%
Plants	Host-Associated → Plants	3.62%
Modeled	Engineered → Modeled	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.30%
Sediment	Environmental → Aquatic → Sediment	3.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.99%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026689	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN581 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01132360	2088090014	Soil	MKKQCXRFVEWLRDTWRSLGRTGGRGHDPLLAQSMASFNFDGGWRELRLKISSKHMPEESTIG
cont_0410.00002490	2166559005	Simulated	MKKQCIRFVEWLRDTWRWLGRSGGRNHDPLLVNSIASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
L01_02664570	2170459006	Grass Soil	NMKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
L02_00099790	2170459007	Grass Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
F47_06014080	2170459009	Grass Soil	MKKQCIRFVEWLRDTWRWLGRSGGRNHDPLLVNSIASFNFDGGWRELLLKTSPKHMPAESTIALIDEPF
2222047663	2209111022	Grass Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTMALIDGPFGV
JGIcombinedJ43975_100014473	3300002899	Soil	MKKQCIRFVEWLCDTWRSLARTGRRSHDPLLVYSMASFNFDGGWRELLLKTSPKHMPTGSTIALIDEPFGV*
Ga0062593_1026206152	3300004114	Soil	MKKQCIRFVEWLRDTWRSLGRTASRSHDPLLVNSMASFNFEGGWRELLLKTSPKHMAAESTIALIDEPSGV*
Ga0062593_1035346602	3300004114	Soil	MKKQCIRFVERLRDAWRSLGRTARRNHDPLLVYSMASFNFDGGWRELLLKTSPEHMPTESTVALIDEPFGV*
Ga0062592_1023689971	3300004480	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIAL
Ga0066674_100204204	3300005166	Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0066672_109011852	3300005167	Soil	MKKQCIRFVEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0066677_100104884	3300005171	Soil	MKKQCIRFAEWLRDTWRSLGRTGGRNHDPLLVNSLASFNFDGGWRELLLKISPKHMAAESTIALIDDPFGV*
Ga0066677_103200421	3300005171	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKISPKYMAAESTIALIDEPFGV*
Ga0066680_101124784	3300005174	Soil	MKKQCIRFVEWLRDTGRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKISPKYMAAESTIALIDEPFGV*
Ga0066684_100664122	3300005179	Soil	MNMKKQCIRFVEWLRDTCRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKVSPKYMAAESTIALIDEPFGV*
Ga0066685_107384381	3300005180	Soil	MKKQCIRFAEWLRDTWRSIGRTGGRNHDPLLVNSLASFNFDGGWRELLLKISPKHMAAESTIALIDDPFGV*
Ga0066675_112126141	3300005187	Soil	LRDTWRSLGRTGGRNHDPLLVNSLASFNFDGGWRELLLKISPKHMAAESTIALIDDPFGV
Ga0065704_107008221	3300005289	Switchgrass Rhizosphere	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0065715_109019291	3300005293	Miscanthus Rhizosphere	MKKQCIRFFEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMSSESTIALIDEPFGV*
Ga0070671_1009306442	3300005355	Switchgrass Rhizosphere	MKKQCIRFVEWLRDTLRALGRTARRNHDPLLAQSMASFNFDGGWRELLLKVSPKHMPCESSINEEFAV*
Ga0070709_108552471	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIQFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMA
Ga0070714_1003554623	3300005435	Agricultural Soil	MKKQCIQFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTIALIDEPFGV*
Ga0070713_1002895043	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIQFVEWLRNTWRSLGRTRRRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTIALIDERFGV*
Ga0070713_1018872622	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRLVERVRNTWRSPGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSSKHMPAESSIALIGEPFVV*
Ga0070705_1019150392	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0070663_1019393582	3300005455	Corn Rhizosphere	MKKQCIRFVEWLRDTLRALGRTGRRNHDPLLAQSMASFNFDGGWRELLLKVSPKHMPC
Ga0070706_1000322414	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRFAEWLRDTWQSLGRTARRNHDPLLTQSMASFNFDGGWRELGLKISSKHMPEESTIGLVKEPVGV*
Ga0070706_1007435802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIQFVEWLRDTWRSLGRTRRRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAPESTIALIDEPFGV*
Ga0070707_1003734712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIQFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAPESTIALIDEPFGV*
Ga0070684_1010955252	3300005535	Corn Rhizosphere	MKKQCIRFVEWLRDTLRALGRTGRRNHDPLLAQSMASFNFDGGWRELLLKVSLKHMPCESSINEEFAV
Ga0066698_103288061	3300005558	Soil	MKKQCIRFVEWLRDTGRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKVSPKYMAAESTIALIDEPFGV*
Ga0066670_101727801	3300005560	Soil	MNMKKQCIRFVERLRDTWRSLGRTGRRNHDPLLVNSMASFNFDGGWRELLLKISPKYMAAESNIALIDEPFGV*
Ga0066903_1027283742	3300005764	Tropical Forest Soil	MKKQCITIFERLRDASRSFLKATGRNHDPLLVQSMASFNFGGGWRELRLKISSKHMSAESTINEEFAV*
Ga0066665_114074472	3300006796	Soil	NMKKQCIRFVEWLRDTGRSLGMTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0066659_113254101	3300006797	Soil	EWLRDTWRSLGRTGGRGHDPLLAQSMASFNFDGGWRELGLKISSRHMPCESSINEEFAV*
Ga0099791_103349852	3300007255	Vadose Zone Soil	MKKQCIRFIEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFVV*
Ga0099793_102097772	3300007258	Vadose Zone Soil	MKKQCIRLIEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESSIALIGEPFVV*
Ga0066710_1005484583	3300009012	Grasslands Soil	MKKHCVRLVERLHYAWQSLVRATRRNHDPFLVDSMASFNFGGGWRELLLKVSPKHMPARSTINERFAV
Ga0066710_1024489112	3300009012	Grasslands Soil	MKKQCIRFVEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV
Ga0066709_1013258333	3300009137	Grasslands Soil	NMKKQCIRFVEWLRDTCRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKVSPKYMAAESTIALIDEPFSV*
Ga0066709_1014279911	3300009137	Grasslands Soil	MKKQCIRFVEWLRDTGRSLGMTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0134088_100379604	3300010304	Grasslands Soil	MKKQCIRFVEWLRDTGRLLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0134086_102012161	3300010323	Grasslands Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLAQSMASFNFDGGWRELGLKISPKHMPEESTIGLVKEPVGV*
Ga0134086_102595712	3300010323	Grasslands Soil	MKKQSIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0134063_101749822	3300010335	Grasslands Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWREPLLKTSPKYMASESTIALIDEPFGV*
Ga0134062_100653752	3300010337	Grasslands Soil	MKKQSIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPSGV*
Ga0126377_133187102	3300010362	Tropical Forest Soil	LRDAWRSLLKATGRNHDPLLVQSMASFNFGGGWRELRLKISLKHMSAESTINEEFAV*
Ga0134066_100653662	3300010364	Grasslands Soil	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFEGGWREPLLKTSPKYMASESTIALIDEPFGV*
Ga0134066_102911441	3300010364	Grasslands Soil	IRFVEMLRDTGRSLGRTGGRNHYPLLVNSMASFNFDGGWRELLLKVSPKHMAAESTISEEFAV*
Ga0134128_128318561	3300010373	Terrestrial Soil	VEWLRDTLRALGRTGRRNHDPLLAQSMASFNFDGGWRELLLKVSPKHMPCESSINEEFAV
Ga0137388_110628051	3300012189	Vadose Zone Soil	DTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0137364_101327543	3300012198	Vadose Zone Soil	MKKQSIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPADSTVGLIGEPFGV*
Ga0137364_106112522	3300012198	Vadose Zone Soil	MKKHCVRLVERLHYAWQSLVRASRRNHDPFLVDSMASFNFGGGWRELLLKVSPKHMPPRSTINERFAV*
Ga0137364_106408392	3300012198	Vadose Zone Soil	MKKQCIRFVEWLRNTGRSLGMTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0137383_100050244	3300012199	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLAQSMASFNFGGGWRELGLKISSKHMPEESTIGLVKEPVGV*
Ga0137382_101120512	3300012200	Vadose Zone Soil	LVEWLRDTGRSLGRTGGRNHDPLLLNSMASFNFDGGWRELLLKTSPKHMAAESNISQEFAV*
Ga0137382_107276362	3300012200	Vadose Zone Soil	MKKHCVRLVERLHYAWQSLVRATRRNHDPFLVDSMASFNFGGGWRELLLKVSPKHMPPRSTINERFAV*
Ga0137365_1000146412	3300012201	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLVYSMASFNFDGGCRELLLKTSPEHMPTESTIVLIDEPFGV*
Ga0137365_100612692	3300012201	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLAQSMASFNFDGGWRELGLKISSKHMPEESTIGLVKEPVGV*
Ga0137365_102416723	3300012201	Vadose Zone Soil	MKKQCIRFVEWLRDTWPSLSRTGGCGHDPLLVNSMASFNFEGGWRELLLKVSPEHMPAESTIGLVNEPSGV*
Ga0137363_106222671	3300012202	Vadose Zone Soil	MKKQCIRFVEWLRDAWRSLGRTGGLNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0137363_115526102	3300012202	Vadose Zone Soil	LVEWLRDTGRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0137399_116668432	3300012203	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPF
Ga0137374_102867253	3300012204	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRGHDPLLVNSMASFNFEGGWRELLLKVSPEHMPAESTIVLV
Ga0137374_103995142	3300012204	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGKTARRNHDPLLAQSMASFNFDGGWRELGLKISSKHMPEESTIGLVKEPVGV*
Ga0137362_117108981	3300012205	Vadose Zone Soil	MKKQCTRFVEWLLDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0137380_114816732	3300012206	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLAQSMASFNFGGGWRELGLKISSKHMPEESTIGEEFAV*
Ga0137376_108064442	3300012208	Vadose Zone Soil	MKKHFIRLFERVRYAWRSFVKTTGRKHDPFLVSSMASFNFDGGWRELLLKTSPKHMPAQSTINERFAI*
Ga0137378_112459201	3300012210	Vadose Zone Soil	QCIRFVEWLRDTWQSLGRTARRNHDPLLVYSMASFNFDGGCRELLLKTSPEHMPTESTIVLIDEPFGV*
Ga0137367_101943191	3300012353	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLARAGGRGHDPLLVNSMASFNFEGGWRELLLKVSPEHMPAESTI
Ga0137367_106881122	3300012353	Vadose Zone Soil	MKKQCIQFVEWLGDTWLSLGRTGGRGHDPLLARSMASFNFEGGWRELKISSRHMPCESSINEEFAV*
Ga0137366_100808752	3300012354	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0137369_109131261	3300012355	Vadose Zone Soil	QCIRFVEWLRDTWRSLGRTGGRGHDPLLARSMASFNFEGGWRELKISSRHMPCESSINEEFAV*
Ga0137368_106047052	3300012358	Vadose Zone Soil	MKKQCIQFVEWLRDTWLSLGRTGGRGHDPLLARSMASFNFEGGWRELKISSRHMPCESSINEEFAV*
Ga0137375_103356331	3300012360	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRGHDPLLVNSMASFNFEGGWRELLLKVSPEHMPAESTI
Ga0137360_102270152	3300012361	Vadose Zone Soil	MKKQCTRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0137361_100951402	3300012362	Vadose Zone Soil	MKKQCIRFVEWLRDTGRSLGRTGRNHDPLLVNSLASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV*
Ga0137398_106042332	3300012683	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIEEPFGV*
Ga0157302_103523682	3300012915	Soil	MKKQSIRFVEWLRDTWRSLGRTARRNHDPLLVYSIASFNFDGGWRELLLKTSPEHMPTESTIVLIDEPFGV*
Ga0137395_103421692	3300012917	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0137396_102102483	3300012918	Vadose Zone Soil	LVEWLRDTGRSLGRTGGCDHDPLLLNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0137394_102045791	3300012922	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKASPKHMPAESTIALIGEPFGV*
Ga0137394_103242012	3300012922	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGLNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0137359_116633811	3300012923	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0137413_101785432	3300012924	Vadose Zone Soil	MKKQCIRFVEWLRDAWRSLGRTGGLNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0137419_102201262	3300012925	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0137419_102514992	3300012925	Vadose Zone Soil	MKKQCIRFVEWLRDAWRSLGRTGGLNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIGLIDEPFGV*
Ga0137404_109166102	3300012929	Vadose Zone Soil	LVEWLRDTGQSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFAV*
Ga0137404_113968651	3300012929	Vadose Zone Soil	MKKRCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0137410_103674053	3300012944	Vadose Zone Soil	MKKQCIRFIEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFGV*
Ga0134077_102830233	3300012972	Grasslands Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKVSPKYMAAESTIALIDEPFGV*
Ga0164304_114785142	3300012986	Soil	MKKQCIRFVEWLRDAWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFVV*
Ga0134075_105909401	3300014154	Grasslands Soil	WLRDTCRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKVSPKYMAAESTIALIDEPFGV*
Ga0134079_104900972	3300014166	Grasslands Soil	MKKQCIRFVERLRDTGRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKVSPKHMAAESTISEEFAV*
Ga0157379_108649122	3300014968	Switchgrass Rhizosphere	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMSAESTIALIDEPFGV*
Ga0137403_104013082	3300015264	Vadose Zone Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIDEPFGV*
Ga0134112_104651591	3300017656	Grasslands Soil	KQCIRFVEWLRDTGRLLGRTGGCNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIGEPFGV
Ga0184605_100070544	3300018027	Groundwater Sediment	MKKHFIRLFERVGYASRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKTSPKHMPAQSTINERFAI
Ga0184608_103577762	3300018028	Groundwater Sediment	MKKQCIQFVEWLRDTWQSLGRTRGRGHDPLLARSMASFNFEGGWRELKISSRHMPCESSINEEFAV
Ga0184621_100713583	3300018054	Groundwater Sediment	MKKHFIRLFERVRYAWRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKTSPKHMPAQSTINERFAI
Ga0184619_102801132	3300018061	Groundwater Sediment	LVEWLRDTGRSLGRTGGCNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTIALIDEPSGV
Ga0184618_100961403	3300018071	Groundwater Sediment	MKKHFIRLFERLRYAWRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKTSPKHMPAQSTINERFAI
Ga0066669_115231102	3300018482	Grasslands Soil	MKKQCIRFVERLRDTWRSLGRTGGRNHDPLLVNSLASFNFDGGWRELLLKISPKHMAAESTIALIDDPFGV
Ga0193756_10036344	3300019866	Soil	MKKHFIRLFERVRYAWRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKSSPKHMPAQSTINERFAI
Ga0193756_10425242	3300019866	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTIALIDEPFGV
Ga0193693_10377512	3300019996	Soil	MKKHFIRLFERVGYAWRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKSSPKHMPAQSTINERFAI
Ga0193755_11775472	3300020004	Soil	MKKQCIRFVEWLRDTWGSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
Ga0179594_100434742	3300020170	Vadose Zone Soil	LVEWLRDTGQSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISQEFA
Ga0210382_100285473	3300021080	Groundwater Sediment	LVEWLRDTGRSLGRTGGCNHDPLLVNSMASFNFDGGWRELLLKTSPKHMAAESTISEEFA
Ga0210408_104394253	3300021178	Soil	KKQSIRFVEWLRDTWRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
Ga0193709_10108103	3300021411	Soil	MNMKKQCTRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKASPKHMPAESTIALIGEPFVV
Ga0193695_10058644	3300021418	Soil	MKKHFIRLFERVRFAWRSLVKTTGRKHDPFLVSSMASFNFDGGWRELLLKSSPKHMPAQSTINERFAI
Ga0242658_10455682	3300022530	Soil	MKKQCIRFVEWLRGTWRSLGRTARRNHDPLLVYSMASFNFDGGWRELLLKTSPEHMPTESTIVLIDEPFGI
Ga0242660_10835662	3300022531	Soil	MKKQSIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKTSPKHMPAESTI
Ga0242654_101341042	3300022726	Soil	MKKQCIRFVEWLRGTWRSLGRTARRNHDPLLVYSMASFNFDGGWRELLLKASPEHMATESTIVLIDEPFGV
Ga0207693_100837591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLAQSMASFNFDGGWRELLLKVSPKHMPCESRINEEFAV
Ga0207663_103544871	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QCIRLVERVRNTWRSPGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSSKHMPAESSIALIGEPFVV
Ga0207700_104078292	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRLVERVRNTWRSPGRTGGRSHDPLLVNSMASFNFDGGWRELLLKTSSKHMPAESSIALIGEPFVV
Ga0207665_100323312	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQCIRFVEWLRDTWRSLGRTGGRNHDALLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIDEPFGV
Ga0209265_10223984	3300026308	Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPKYMAAESTIALIDEPFGV
Ga0209472_12511381	3300026323	Soil	SIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPADSTVGLIGEPFGV
Ga0257160_10508262	3300026489	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFEGGWRELLLKASPKHMPAESTIALIGEPF
Ga0209806_12688022	3300026529	Soil	MKKQCIRFAEWLRDTWRSLGRTGGRNHDPLLVNSLASFNFDGGWRELLLKISPKHMAAESTIALIDDPFGV
Ga0209156_102244772	3300026547	Soil	MKKQSIRFVEWLRDTWRSFGRTGGRNHDPLLVNSMASFNFDGGWRELLLKISPKHMPADSTVGLIGEPFGV
Ga0209474_101130004	3300026550	Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWREPLLKTSPKYMASESTIALIDEPFGV
Ga0209474_102166021	3300026550	Soil	MNMQKQCIRFVEWLRDTCRSLGRTGGRSHDPLLVNSMASFNFDGGWRELLLKVSPKYMAAESTIALIDEPFGV
Ga0208579_1029832	3300026689	Soil	MKKRCIRSVERLRYAWRSLVGAVSRKHDRFLVYSMASFNFGGGWRELLSEGFRPKHMTAKSTIVFINES
Ga0137415_104841833	3300028536	Vadose Zone Soil	MKKQCIRLVEWLRDTGRSLGRTGGCDHDPLLLNSMASFNFDGGWRELLLKTSPKHMAAES
Ga0307292_102480331	3300028811	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTIALIGEPFGV
Ga0138296_10119252	3300030923	Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKISPKHMSAESTIALIDEPFGV
Ga0170824_1116474512	3300031231	Forest Soil	MKKQCTRFVEWLRDTWRSLGRSARRNHDPLLVYSMASFNFDGGWRELLLKTSPEHMPTESTIVLIDEPFGV
Ga0170820_159602031	3300031446	Forest Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTMALIDGP
Ga0170819_102332632	3300031469	Forest Soil	MKKQCIRFVEWLRDTWRSLGGTGGRNHDPLLVNSMASFNFDGGWRELLLKTSPKHMPAESTMALIDGPFGV
Ga0310813_102288153	3300031716	Soil	MKKQCIRFVEWLGDTWRSLGRTARRNHDPLLVYSMASFNFDGGWRELLLKTSPEHMPTESTIVLIDKPFGV
Ga0310811_104021982	3300033475	Soil	MKKQCIRFVEWLGDTWRSLGRTARRNHDPLLVYSMASFNFDGGWRELLLKTSPEHMPTESTIVLIDEPFGV
Ga0370541_013879_516_731	3300034680	Soil	MKKQCIRFVEWLRDTWRSLSRTGGRGHDPLLVNSMASFNFEGGWRELLLKVSPEHMPTESNIVLVNEPSGV
Ga0370546_014882_181_381	3300034681	Soil	MKKQCIQFVEWLRDTWQSLGRTGGRGHDPLLARSMASFNFEGGWRELKISSRHMPCESSINEEFAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055582

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences