Metagenome / Metatranscriptome Family F055578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	70 residues
Representative Sequence	CPGHPRSRRATRLRLVSVFRQGWVALLVALLRQEPLPEGRFVPEPWPAVPALEDEACEPAMALPEAA
Number of Associated Samples	116
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.32 %
% of genes near scaffold ends (potentially truncated)	86.23 %
% of genes from short scaffolds (< 2000 bps)	92.03 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.072 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (26.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.029 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.42% β-sheet: 0.00% Coil/Unstructured: 71.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF13808	DDE_Tnp_1_assoc	2.90
PF01609	DDE_Tnp_1	2.17
PF03372	Exo_endo_phos	0.72
PF00350	Dynamin_N	0.72
PF00076	RRM_1	0.72
PF00239	Resolvase	0.72
PF01695	IstB_IS21	0.72
PF00296	Bac_luciferase	0.72
PF13358	DDE_3	0.72
PF01610	DDE_Tnp_ISL3	0.72
PF02738	MoCoBD_1	0.72
PF12172	DUF35_N	0.72
PF13340	DUF4096	0.72
PF03051	Peptidase_C1_2	0.72
PF07508	Recombinase	0.72
PF03400	DDE_Tnp_IS1	0.72
PF12759	HTH_Tnp_IS1	0.72
PF01841	Transglut_core	0.72
PF00515	TPR_1	0.72
PF13759	2OG-FeII_Oxy_5	0.72
PF00106	adh_short	0.72
PF04392	ABC_sub_bind	0.72
PF00293	NUDIX	0.72
PF05593	RHS_repeat	0.72
PF00583	Acetyltransf_1	0.72
PF00856	SET	0.72
PF05598	DUF772	0.72
PF03781	FGE-sulfatase	0.72
PF01565	FAD_binding_4	0.72
PF13580	SIS_2	0.72
PF00535	Glycos_transf_2	0.72
PF05406	WGR	0.72
PF13594	Obsolete Pfam Family	0.72
PF04986	Y2_Tnp	0.72
PF08388	GIIM	0.72
PF06808	DctM	0.72
PF00589	Phage_integrase	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	2.17
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	2.17
COG5421	Transposase	Mobilome: prophages, transposons [X]	2.17
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	2.17
COG3293	Transposase	Mobilome: prophages, transposons [X]	2.17
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	2.17
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.45
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.72
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.72
COG3579	Aminopeptidase C	Amino acid transport and metabolism [E]	0.72
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.72
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.72
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.07 %
Unclassified	root	N/A	44.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.45 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.45 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.45 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.72 %
Candidatus Vecturithrix	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.07 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.45 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.72 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.72 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.72 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.07 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	3.62 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.72 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.72 %
Armatimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.72 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.72 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.07 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.62 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.72 %
Armatimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales → Armatimonadaceae	0.72 %
Calotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.72 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.72 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.72 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.07 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.62 %
Armatimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales → Armatimonadaceae → Armatimonas	0.72 %
Crateriforma	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma	0.72 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.72 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.72 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Calothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix	0.72 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.07 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.62 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.72 %
Armatimonas rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales → Armatimonadaceae → Armatimonas → Armatimonas rosea	0.72 %
Actinomadura chibensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura chibensis	0.72 %
unclassified Leptolyngbya	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya	0.72 %
unclassified Syntrophobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter	0.72 %
unclassified Calothrix	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix	0.72 %
Crateriforma conspicua	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	0.72 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.07 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3.62 %
Leptolyngbya sp. BC1307	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. BC1307	0.72 %
Syntrophobacter sp. SbD1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD1	0.72 %
Ktedonobacter sp. 13_1_40CM_4_52_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	0.72 %
Calothrix sp. PCC 7103	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix → Calothrix sp. PCC 7103	0.72 %
Armatimonas rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales → Armatimonadaceae → Armatimonas → Armatimonas rosea	0.72 %
Actinomadura chibensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura chibensis	0.72 %
Crateriforma conspicua	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	0.72 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.72 %
Candidatus Vecturithrix granuli	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0809468	All Organisms → cellular organisms → Bacteria → Proteobacteria	2614	Open in IMG/M
3300000550\|F24TB_11467283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2150	Open in IMG/M
3300000559\|F14TC_101219418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	776	Open in IMG/M
3300002562\|JGI25382J37095_10211990	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300004801\|Ga0058860_11270621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix → Calothrix sp. PCC 7103	533	Open in IMG/M
3300005177\|Ga0066690_10515937	Not Available	803	Open in IMG/M
3300005181\|Ga0066678_10226144	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005181\|Ga0066678_11102632	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005332\|Ga0066388_103053690	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005332\|Ga0066388_107600195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	543	Open in IMG/M
3300005332\|Ga0066388_108254676	Not Available	520	Open in IMG/M
3300005338\|Ga0068868_100583299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	989	Open in IMG/M
3300005338\|Ga0068868_101230549	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005340\|Ga0070689_101705792	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005406\|Ga0070703_10060340	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005445\|Ga0070708_100023355	All Organisms → cellular organisms → Bacteria	5259	Open in IMG/M
3300005445\|Ga0070708_100912689	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300005471\|Ga0070698_100280172	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005518\|Ga0070699_101466143	Not Available	626	Open in IMG/M
3300005545\|Ga0070695_101297897	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	601	Open in IMG/M
3300005559\|Ga0066700_10535352	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005561\|Ga0066699_10834667	Not Available	647	Open in IMG/M
3300005713\|Ga0066905_100264719	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300005719\|Ga0068861_100897813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	839	Open in IMG/M
3300005764\|Ga0066903_104664705	Not Available	730	Open in IMG/M
3300005983\|Ga0081540_1096576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300006034\|Ga0066656_11108643	Not Available	509	Open in IMG/M
3300006797\|Ga0066659_10573731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	913	Open in IMG/M
3300006797\|Ga0066659_10821178	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006800\|Ga0066660_11269660	Not Available	576	Open in IMG/M
3300006844\|Ga0075428_100462572	Not Available	1358	Open in IMG/M
3300006844\|Ga0075428_102303323	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006845\|Ga0075421_100110428	All Organisms → cellular organisms → Bacteria	3456	Open in IMG/M
3300006845\|Ga0075421_100125375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD1	3221	Open in IMG/M
3300006880\|Ga0075429_100027767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4912	Open in IMG/M
3300006937\|Ga0081243_1381514	Not Available	682	Open in IMG/M
3300007265\|Ga0099794_10763284	Not Available	517	Open in IMG/M
3300009012\|Ga0066710_102147345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300009038\|Ga0099829_11466772	Not Available	563	Open in IMG/M
3300009089\|Ga0099828_10810849	Not Available	838	Open in IMG/M
3300009089\|Ga0099828_11866282	Not Available	527	Open in IMG/M
3300009089\|Ga0099828_12012674	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009098\|Ga0105245_11316754	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300009100\|Ga0075418_10291087	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300009137\|Ga0066709_102953857	Not Available	625	Open in IMG/M
3300009162\|Ga0075423_12861536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009177\|Ga0105248_11113990	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300009801\|Ga0105056_1017492	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300009804\|Ga0105063_1011879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Candidatus Vecturithrix → Candidatus Vecturithrix granuli	938	Open in IMG/M
3300009806\|Ga0105081_1082423	Not Available	522	Open in IMG/M
3300009807\|Ga0105061_1032599	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300009812\|Ga0105067_1047253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	675	Open in IMG/M
3300009816\|Ga0105076_1089964	Not Available	587	Open in IMG/M
3300009822\|Ga0105066_1012995	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1570	Open in IMG/M
3300010038\|Ga0126315_11216051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	512	Open in IMG/M
3300010039\|Ga0126309_10228345	Not Available	1044	Open in IMG/M
3300010047\|Ga0126382_12069510	Not Available	544	Open in IMG/M
3300010047\|Ga0126382_12533681	Not Available	501	Open in IMG/M
3300010140\|Ga0127456_1123068	Not Available	584	Open in IMG/M
3300010359\|Ga0126376_10203115	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300010361\|Ga0126378_12421735	Not Available	599	Open in IMG/M
3300010362\|Ga0126377_11114681	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010366\|Ga0126379_10471940	Not Available	1321	Open in IMG/M
3300010375\|Ga0105239_11681570	Not Available	734	Open in IMG/M
3300010391\|Ga0136847_12748643	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua	1770	Open in IMG/M
3300010398\|Ga0126383_12729746	Not Available	576	Open in IMG/M
3300010398\|Ga0126383_13425453	Not Available	518	Open in IMG/M
3300010399\|Ga0134127_10349009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1445	Open in IMG/M
3300011269\|Ga0137392_11251249	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012189\|Ga0137388_11050804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	750	Open in IMG/M
3300012189\|Ga0137388_11376192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Armatimonadales → Armatimonadaceae → Armatimonas → Armatimonas rosea	645	Open in IMG/M
3300012189\|Ga0137388_11913366	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012203\|Ga0137399_11523721	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012203\|Ga0137399_11621364	Not Available	535	Open in IMG/M
3300012209\|Ga0137379_10828590	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	830	Open in IMG/M
3300012209\|Ga0137379_11300781	Not Available	633	Open in IMG/M
3300012351\|Ga0137386_10977353	Not Available	603	Open in IMG/M
3300012357\|Ga0137384_11561005	Not Available	510	Open in IMG/M
3300012358\|Ga0137368_10854163	Not Available	559	Open in IMG/M
3300012359\|Ga0137385_11385075	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012359\|Ga0137385_11557372	Not Available	525	Open in IMG/M
3300012360\|Ga0137375_11453806	Not Available	506	Open in IMG/M
3300012362\|Ga0137361_11594673	Not Available	574	Open in IMG/M
3300012925\|Ga0137419_11246433	Not Available	624	Open in IMG/M
3300012930\|Ga0137407_11636544	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012930\|Ga0137407_12234083	Not Available	523	Open in IMG/M
3300012971\|Ga0126369_12731100	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300012977\|Ga0134087_10320321	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300013306\|Ga0163162_10148568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2460	Open in IMG/M
3300014150\|Ga0134081_10206435	Not Available	670	Open in IMG/M
3300014154\|Ga0134075_10457179	Not Available	568	Open in IMG/M
3300015245\|Ga0137409_11426561	Not Available	538	Open in IMG/M
3300015373\|Ga0132257_104555755	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300015374\|Ga0132255_103846335	Not Available	638	Open in IMG/M
3300016294\|Ga0182041_12278430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	507	Open in IMG/M
3300016371\|Ga0182034_10829473	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	792	Open in IMG/M
3300016422\|Ga0182039_12111953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300016422\|Ga0182039_12162814	Not Available	513	Open in IMG/M
3300017659\|Ga0134083_10192154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300017659\|Ga0134083_10337527	Not Available	646	Open in IMG/M
3300018074\|Ga0184640_10035820	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300018078\|Ga0184612_10172314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura chibensis	1129	Open in IMG/M
3300018082\|Ga0184639_10447718	Not Available	661	Open in IMG/M
3300018468\|Ga0066662_11779263	Not Available	645	Open in IMG/M
3300018469\|Ga0190270_10042697	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300019229\|Ga0180116_1020045	Not Available	1142	Open in IMG/M
3300019249\|Ga0184648_1179873	Not Available	743	Open in IMG/M
3300019259\|Ga0184646_1505558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300019487\|Ga0187893_10966884	Not Available	503	Open in IMG/M
3300025149\|Ga0209827_10512079	Not Available	518	Open in IMG/M
3300025885\|Ga0207653_10327881	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300025910\|Ga0207684_10610900	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300025922\|Ga0207646_10083927	Not Available	2849	Open in IMG/M
3300025927\|Ga0207687_11293365	Not Available	627	Open in IMG/M
3300025927\|Ga0207687_11340391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300025936\|Ga0207670_10439092	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300026297\|Ga0209237_1089954	Not Available	1378	Open in IMG/M
3300026313\|Ga0209761_1147236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	1114	Open in IMG/M
3300027511\|Ga0209843_1075418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. BC1307	580	Open in IMG/M
3300027909\|Ga0209382_10651185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300027909\|Ga0209382_11020881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	860	Open in IMG/M
3300028889\|Ga0247827_10991470	Not Available	570	Open in IMG/M
3300030574\|Ga0247648_1050273	Not Available	795	Open in IMG/M
3300030619\|Ga0268386_10392278	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300030621\|Ga0247655_10265438	Not Available	545	Open in IMG/M
3300031092\|Ga0308204_10343383	Not Available	512	Open in IMG/M
3300031114\|Ga0308187_10277670	Not Available	620	Open in IMG/M
3300031719\|Ga0306917_10105214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2032	Open in IMG/M
3300031820\|Ga0307473_10055742	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300031833\|Ga0310917_10886154	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031910\|Ga0306923_11310502	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031954\|Ga0306926_11452617	Not Available	793	Open in IMG/M
3300032001\|Ga0306922_10152350	Not Available	2472	Open in IMG/M
3300032174\|Ga0307470_11005759	Not Available	664	Open in IMG/M
3300032261\|Ga0306920_103227204	Not Available	610	Open in IMG/M
3300034660\|Ga0314781_003202	Not Available	1896	Open in IMG/M
3300034662\|Ga0314783_169664	Not Available	516	Open in IMG/M
3300034680\|Ga0370541_063834	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.06%
Host-Associated	Host-Associated	15.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.26%
Plants	Host-Associated → Plants	15.22%
Aquatic	Environmental → Aquatic	5.80%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Freshwater	Environmental → Aquatic → Freshwater	2.90%
Sediment	Environmental → Aquatic → Sediment	2.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Cave	Environmental → Terrestrial → Cave	0.72%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.70%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.14%
Sand	Environmental → Terrestrial → Soil → Sand	5.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Lake	Environmental → Aquatic → Freshwater → Lake	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.72%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006937	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030621	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08094681	3300000033	Soil	RATRLRLVXVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPEAA*
F24TB_114672831	3300000550	Soil	SVFRQGWVRLLVALLRQAPLPVGRFVPEPWPVVPPLVEEVCELALAMPEAA*
F14TC_1012194183	3300000559	Soil	RLVSVFRHGWVRLLVALLRQEPLPQGAFVPEPWPAVPPWEEENRELELALPQAA*
JGI25382J37095_102119901	3300002562	Grasslands Soil	PRTRRATRLRLVSVFRQGWVALLVALLRQEPLPQGHFVPEPWPAVPAWADETGEPPLALPEAA*
Ga0058860_112706211	3300004801	Host-Associated	PRMRRATRLRLVSGFRQSWVALLVALLRHEPWPQGHFVPEPWPTVPALEDEACEPAMTLPAAA*
Ga0066690_105159372	3300005177	Soil	PASTLLDVTALCPGHPRSRRATRLRLVSVFRQGWVALLVALLRQEPLPEGRFVPEPWPAVPVWEDEACEPAMALPEAA*
Ga0066678_102261441	3300005181	Soil	RATRLRLVSVFRQGWVALLVALLRQDPLPEGRLVPEPWPAILPLEEEAREPDMALPEAA*
Ga0066678_111026321	3300005181	Soil	PASTLLDVTAWCPERARMRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPEVVLPEAA*
Ga0066388_1030536901	3300005332	Tropical Forest Soil	VTALCPARPRSRRATRLRLVSVFRQGWVALLVALLRQEPLPQGRFVPEPWPVVPPLAGDPAAPSMVLPEAA*
Ga0066388_1076001952	3300005332	Tropical Forest Soil	RVLRQGWIILRGAWLRQAPVPQGRLVPEPGPAVPAWEAEAHVPPLALPEAACGTEEPRR*
Ga0066388_1082546762	3300005332	Tropical Forest Soil	WCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPEAA*
Ga0068868_1005832993	3300005338	Miscanthus Rhizosphere	RTRRATRLRLVSGWRPGGVELWVAWLRQEPLPQGRFVPEPWPAVPALEDEVCAPAMPLPEAA*
Ga0068868_1012305492	3300005338	Miscanthus Rhizosphere	GADEAVPASTLGDIIALCPGRPRMRRATRLRLVSGFRQSWVALLVALLRHEPWPQGHFVPEPWPTVPALEDEACEPAMTLPAAA*
Ga0070689_1017057921	3300005340	Switchgrass Rhizosphere	MPASTLLDVTALCPGRPRTRRATRLRLVSGWRPGGVELWVAWLRQEPLPQGRFVPEPWPAVP
Ga0070703_100603403	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPASTLLAVTLLGPERPRSRRATRLRLVSVLRQGWVELWVALLRQDPLPQGRFVPAPWPTVPALEDEACEPAMTLPEAA*
Ga0070708_1000233551	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TGVCPERSRSRRATRLRLVSVFRQGWVALLVALLRQEPLPIGRFVPEPWPAVPSWEGEAREPQQAMPKAA*
Ga0070708_1009126891	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RTRRATRLRLVSVFRQGWVRLLVALLRQAPLPEGRFVPEPWPVVPPLIEEVCELALARPAAA*
Ga0070698_1002801724	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TRLRLVSVFRQGWVQLLVALLRQDPLPEGHFVPEPWPVVPPLAEEVCELALAMPEAA*
Ga0070699_1014661431	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RATRLRLVSVFRQGWVELLVALLRQDPLPQGRFVPEPWPTVPALEDEACEPAMTLPEAA*
Ga0070695_1012978971	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SRRATRLRLVSVLCQGWIRLLVALLRQEPWPQGRLVPEPWPAVPPLAGDPDAPEVVLPEAA*
Ga0066700_105353522	3300005559	Soil	VFRQGWVRLLVALLRQDPVPEGRFVPEPWPVVPPLAETVGEWALAMPEAA*
Ga0066699_108346671	3300005561	Soil	TIPASTLLDVTAWCPERPRMRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPEVVLPEAA*
Ga0066905_1002647193	3300005713	Tropical Forest Soil	MPASPWLDVPGWGPERPRTRRATRLRLVSVWRQGWGRRVGARRRPEPWPEGRWVPAPWPTVPPLAGAPSASGMVLP
Ga0068861_1008978133	3300005719	Switchgrass Rhizosphere	RATRLRLVSVFRPGWVALLVALLRQDPLPEGRFMPAPWPAVPPLAGDPWAPGMVLPEAA*
Ga0066903_1046647051	3300005764	Tropical Forest Soil	ETIPASTLLDVTALCPSRPRTRRATRLLLVSVFRPGWVALLVTLLRQEPLPQGRFVPEPWLAVPAWEDEVCEPAMALPEAA*
Ga0081540_10965761	3300005983	Tabebuia Heterophylla Rhizosphere	TRLRLVSVLRQGWVRLLVALRRQDPLPGGRCVPEPWPVVPPLAEVCEWALTRPEAA*
Ga0066656_111086432	3300006034	Soil	RLRLVSVFRQGWVRLLVALPRQEPLPQGRLVPEPWPAVPPLAGDPYAPDVVLPEAA*
Ga0066659_105737312	3300006797	Soil	ADATIPASTLLDATAWCPERPRMRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPEVVLPEAA*
Ga0066659_108211781	3300006797	Soil	ECPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPDVVLPEAA*
Ga0066660_112696601	3300006800	Soil	DVTALCPDRPRTRRATRLRLVSVFRPGGVRLLVALLRQDPLPEGRLVPEPWPAVPPLEGETSEPPMALPAAA*
Ga0075428_1004625722	3300006844	Populus Rhizosphere	MWPQLCPARPQSRRATRLRLVSVFRQGWITIRVALLRQELWPLGRFVPDPWPFVPPWEEEAHEPVMPMPDAA*
Ga0075428_1023033231	3300006844	Populus Rhizosphere	MTALCPGRPRTRRATRLRLVSVFRQGWVELLVALLRQEPLPQGCFVPEPWPAVPALEDEACAPVMTLPEAA*
Ga0075421_1001104286	3300006845	Populus Rhizosphere	ETIPTSTLLDITALCPERPRSRRATRLRLVSVFRQGWVTLLVALLRQEPLPEGRFIPEPWPMVPPLATEVCELALAMPEAA*
Ga0075421_1001253754	3300006845	Populus Rhizosphere	MWRQLCPARPQSRRATRLRLVSVFRQGWITIRVALLRQELWPLGRFVPDPWPFVPPWEEEAHEPVMPMPDAA*
Ga0075429_1000277671	3300006880	Populus Rhizosphere	TLLDVTALCPDRPRTRRAPRLRLVSVFRQGWVRRLAALLHQAPLPEGCFVPEPWPAVPTWEDEPCEPAMVLPEAACRADGQQQRRLGDKAYA*
Ga0081243_13815143	3300006937	Tropical Rainforest Soil	LRLVSVFRQGWVRLLVALLCQAPLPEGRFVPEPWPVVPPLAEEAGEWALAMPEAA*
Ga0099794_107632842	3300007265	Vadose Zone Soil	STLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRRLVALRRQDPLPEGHCVPEPWPVVPPLLEEVGELALAMPEAA*
Ga0066710_1021473452	3300009012	Grasslands Soil	ALCAGRPRTVQARRLRLVSVFCQGWVGLLVALLRQEPLPQGAFVPEPWPTVPPWEDEARAPELALPQAA
Ga0099829_114667721	3300009038	Vadose Zone Soil	ALLGVTGLCPERSRSRRATRLRLVSVFRQGWVALLVALLRQEPLPIGRFVPEPWPAVPSWEEEACASQQVMPKAA*
Ga0099828_108108491	3300009089	Vadose Zone Soil	PASTRLDVTALDPGQPRRRRATRLRLVSVLRAGWVALVVALLRHEPLPQGRFVPEPWPTVPAWEDEAREPAMTLPQAA*
Ga0099828_118662821	3300009089	Vadose Zone Soil	RRATRLRLVSVFRQGWVTLLVALLRQGSLPEGRFVPEPWPAVPPLEGATSEPPMVLPAAA
Ga0099828_120126741	3300009089	Vadose Zone Soil	GLCPERPRSRRATRLRLVSVFRQGWVELLVALLRHDPLPQGRFVPEPWPAVPALADEAYEPAMALPEAA*
Ga0105245_113167541	3300009098	Miscanthus Rhizosphere	STLGDIIALCPGRPRMRRATRLRLVSGFRQSWVALLVALLRHEPWPQGHFVPEPWPTVPALEDEACEPAMTLPAAA*
Ga0075418_102910874	3300009100	Populus Rhizosphere	MTALCPGRPRTRRATRLRLVSVFRQGWVELLVALLRQEPLPQGCFVPEPWPAVPALEQGKRI*
Ga0066709_1029538571	3300009137	Grasslands Soil	RLRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPVVPPLEEATSEPPMALPIAA*
Ga0075423_128615362	3300009162	Populus Rhizosphere	RATRLRLVSVFRQGWVRLLVALLRQEPLLEGRLVPEPWPAVPPLAGDLYAPSMVLPEAA*
Ga0105248_111139903	3300009177	Switchgrass Rhizosphere	IIALCPGRPRMRRATRLRLVSGFRQSWVALLVALLRHEPWPQGHFVPEPWPTVPALEDEACEPAMTLPAAA*
Ga0105056_10174922	3300009801	Groundwater Sand	GEVADETIPVSTLLDVTGMCPERPRTRRATRLRLVSVFRQGWVTLFVALLRQEPLPQGRFVPEPWPVVPPLEEEVPDPVLGMPKAA*
Ga0105063_10118792	3300009804	Groundwater Sand	AADETIPASTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRRLVALLRQDPLPAGRFVPEPWPAVLPVAGETSAPDMALPEAA*
Ga0105081_10824232	3300009806	Groundwater Sand	RLRLVSVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPVPVRAMPKAA*
Ga0105061_10325991	3300009807	Groundwater Sand	PRTRRATRLRLVRVFRQGWVTLLVALLRHEPMPQGRVVPEPWPVVPPLEEEVPVPVRAMPKAA*
Ga0105067_10472531	3300009812	Groundwater Sand	TRRATRLRLVSVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPVPVRAMPKAA*
Ga0105076_10899642	3300009816	Groundwater Sand	GADETIPVSTLLDVTGMCPGRPRTRRATRLRLVSVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPDPVMGMPKAA*
Ga0105066_10129954	3300009822	Groundwater Sand	DVTGMCPERPRTRRATRLRLVRVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVSDPVRGMPKAA*
Ga0126315_112160512	3300010038	Serpentine Soil	ATRLRLVSVFRQGWVTLLVALLRQEPVPQGAFVPEPWPAVPPWEDEVREPGLALPQAA*
Ga0126309_102283452	3300010039	Serpentine Soil	LLSGGEVADATIPVGTLLDVTGMGPERPRTRRATRLRLVSVFRQGWVTLLGALLRQEPLPQGRFVPELWPVVPPLEEEAPAPDGVMPMAA*
Ga0126382_120695101	3300010047	Tropical Forest Soil	MRRATRLRLVSVFRHGWVRRLVALLRQDLLPEGRLIPEPWPTVPSLAGDPCAPAVVLAEAA*
Ga0126382_125336812	3300010047	Tropical Forest Soil	RRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAHEVVLLEAA
Ga0127456_11230681	3300010140	Grasslands Soil	IPVSTLLDVTGMCPERPRTRRATRLRLVSVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPVPVRAMPKAA*
Ga0126376_102031152	3300010359	Tropical Forest Soil	GLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPVVPPLADATGEPPMALPVAA*
Ga0126378_124217351	3300010361	Tropical Forest Soil	MPASPLLDVPGWCPERPRTRRATRLRLVRVLRQGWGRLLVALLRQEPLPPGRLVPEPWPAGPPLA
Ga0126377_111146811	3300010362	Tropical Forest Soil	TRLRLVRVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPGIVLPEAA*
Ga0126379_104719402	3300010366	Tropical Forest Soil	ERPRTRRATRLRLVSVFRQGWVRLLVALLRQAPLPQGRLVPDPWPAVPPLAGDPYAPGIVLPEAA*
Ga0105239_116815702	3300010375	Corn Rhizosphere	DVTGWCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPEAA*
Ga0136847_127486432	3300010391	Freshwater Sediment	VGEVADETIPVSTLLDVTEMGPERPRTRRATRLRLVRVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLGEEVPVPVRAMPKAA*
Ga0126383_127297462	3300010398	Tropical Forest Soil	RLRLVSVFRQGWVALLVALLRQESLPEGRFVPEPWPAVPAWEAETCEPPLALPEAA*
Ga0126383_134254531	3300010398	Tropical Forest Soil	ALCPGQGRTRRATRLRLVSVFRQGWVTLLVALLRHESLPQGRFVPEPWPTVPALEEEAQEPARPKAA*
Ga0134127_103490091	3300010399	Terrestrial Soil	PRSRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPEAA*
Ga0137392_112512491	3300011269	Vadose Zone Soil	SVFRQGWVRRLVALRRQDPLPEGHCVPEPWPVVPPLLEEVGELALAMPEAA*
Ga0137388_110508042	3300012189	Vadose Zone Soil	RRRATRLRLVSVFRQGWVELVVALLRHEPLPQGRFVPEPWPTVPAWEDEAREPAMTLPQAA*
Ga0137388_113761921	3300012189	Vadose Zone Soil	RATRLRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPVVPPLLEEVCELALALPEAA*
Ga0137388_119133661	3300012189	Vadose Zone Soil	RTRRATRLRLVSVFRQGWVTLLVALLRHEPMPQGRCVPEPWPVVPPFEEEVPGPVRAMAKAA*
Ga0137399_115237211	3300012203	Vadose Zone Soil	PRTRRATRLRLVSVFRQGWVALLVALLRQEPLPIGRFVPEPWPAVPSWEEEACESQQVMPKAA*
Ga0137399_116213641	3300012203	Vadose Zone Soil	PRTRRATRLRLVSVCRQGWVRLLVALLRQEPWPAGRLVPEPWPVVPPLADEVCELAIVMPEAA*
Ga0137379_108285901	3300012209	Vadose Zone Soil	RLRLVSVFRQGWVTLLVALLRHEPLPQGGFVPEPWPVVPPLEEEVPAPVKVMPKAA*
Ga0137379_113007812	3300012209	Vadose Zone Soil	AGSRRGPVVAAQCRRGGDETIPASTRLAVPGWCPERLRTRRATRLRLVRVLRPGWVRRLVALRRQEPLPEGRLVPEPWPAMPPLAGAPYAPGIVLPEAA*
Ga0137386_109773532	3300012351	Vadose Zone Soil	VAAQCRRGGDETIPASTRLAVPGWCPERLRTRRATRLRLVRVLRPGWVRRLVALRRQEPLPDGRLVPEPWPAMPPLAGAPYAPGIVLPEAA*
Ga0137384_115610051	3300012357	Vadose Zone Soil	ETMPVSTLLDVTGMCPERPRTRRATRLRLVRVFRQGWVTLLVALLRHEPVPQGGFVPAPWPVVPPLEEEVPAPVKVMPKAA*
Ga0137368_108541631	3300012358	Vadose Zone Soil	PVSTLLDVTGMCPERPRTRRATRLRLVRVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPDPVMGMPKAA*
Ga0137385_113850752	3300012359	Vadose Zone Soil	TLLDVTALCPGRPRTRRATRLRLVSVLRQGWVALVVALLRQEPLPQGAFVPEPWPAVPPWEDEARELELGLPQAA*
Ga0137385_115573721	3300012359	Vadose Zone Soil	VAAQCRRGGDETIPASTRLAVPGWCPERLRTRRATRLRLVRVLRPGWVRRLVALRRQEPLPEGRLVPEPWPAMPPLAGAPYAPGIVLPEAA*
Ga0137375_114538061	3300012360	Vadose Zone Soil	ETIPVSTRLDVTGMCPERPRTRRATRLRLVSVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVPVPVRAMPKAA*
Ga0137361_115946731	3300012362	Vadose Zone Soil	ATRLRLVRVLRQGWVTLLVARRRQDPLPEGRLMPEPWPEVPPLAGATSEPPVALPVAA*
Ga0137419_112464331	3300012925	Vadose Zone Soil	SILLDVTGVCPERPRTRRATRLRLVSVCRQGWVRLLVALLRQEPWPAGRLVPEPWPVVPPLADEVCELAIVMPEAA*
Ga0137407_116365441	3300012930	Vadose Zone Soil	VSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGHFVPEPWPVVPPLLEEVDELALTMPEAA*
Ga0137407_122340831	3300012930	Vadose Zone Soil	VSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALRRQAPLPEGRFVPEPWPVVPSLLEEVCELAMAMPEAA*
Ga0126369_127311001	3300012971	Tropical Forest Soil	PVSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPVVPPLADATGEPPMALPVAA*
Ga0134087_103203212	3300012977	Grasslands Soil	VTALCPERPRSRRATRLRLVSVFRQGWVALLVALLRQDPLPEGRFVPEPWPVVPPLAEEVCELAMTMPEAA*
Ga0163162_101485683	3300013306	Switchgrass Rhizosphere	ETMPASTLLDVTALCPGRPRTRRATRLRLVSGWRPGGVELWVAWLRQEPLPQGRFVPEPWPAVPALEDEVCAPAMPLPEAA*
Ga0134081_102064351	3300014150	Grasslands Soil	SPAAKRRKASSVLLVARFSQGGVALWVALLRQAPWPEGRLVPEPWPVGPPLAEEVCALALTMPEAA*
Ga0134075_104571792	3300014154	Grasslands Soil	RLRLVSVFRQGWVELLVALLRQDPLPQGRFVPEPWPAVPAWEDEACEPVMALLEAA*
Ga0137409_114265611	3300015245	Vadose Zone Soil	PGRPRTRRATRLRLVSIFRQGWVVLLVALLRHEPLPQGRFVPEPWPMVPVLEDETCAPAMALPEAA*
Ga0132257_1045557552	3300015373	Arabidopsis Rhizosphere	CPGRPRTRRATRLRLVSVFRQGWVALLLALLRQEPLPEGRLIPEPWPAVPAWEEASHTPAPTLLEAA*
Ga0132255_1038463351	3300015374	Arabidopsis Rhizosphere	TLLDVTALCPGRPRPRRATRLRLVSVFRQGWVALLVVLLRQEPLPEGRLIPAPWPAVPAWEEASHTPAQKLPEAA*
Ga0182041_122784301	3300016294	Soil	IPASTLLDVTALAPGRPRTRRATRLRLVSVFRQGWITLLVALLRQEPVPQGRFVPEPWPAVPAWEEEAQAPQLAMPEAA
Ga0182034_108294731	3300016371	Soil	ADETIPASTLLDVTALCPSRPRTRRATRLRLVSVFRQGWVALLVALLRQEPVPQGRFVPEPWPAVPPWAEEAPEPQLALPKAV
Ga0182039_121119531	3300016422	Soil	IPSSTLLDVTALCPGRTRTRRATRLRLVSVFRQGWVALLVALLRQEPLPQGAFVPEPWPAVPPWEDGASEPALALSQAA
Ga0182039_121628141	3300016422	Soil	IPSSTLLDVTALCPGRTRTRRATRLRLVSVFRQGWVALLVALLRQEPLPEGHLVPEPWPAVPPWAEETPEPQLALPKAA
Ga0134083_101921541	3300017659	Grasslands Soil	VGGAAEETIPVSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPAVPAWEDETCEPAMILPEAA
Ga0134083_103375271	3300017659	Grasslands Soil	LRLVSVFRQGWVRLLVALLRQDPLPEGRFVPEPWPAVPAWEDEACEPAMALPEAA
Ga0184640_100358204	3300018074	Groundwater Sediment	TRRATRLRLVSVFRQASVTLLVALRRHKPMPQGRFVPEPWPVVPPLEEEVPVPVRAMPKA
Ga0184612_101723141	3300018078	Groundwater Sediment	PRTRRATRLRRVSVFRQGWTALLVALLRQEPVPQGRFVPEAWPAVPPWEEEAHEPQLAMPEAA
Ga0184639_104477181	3300018082	Groundwater Sediment	ERPRTRRATRLRLVSVLRQGWVTLLVALRRHKPMLQGRFVPEPWPVVPPLEEEVPVPVRAMPKAA
Ga0066662_117792632	3300018468	Grasslands Soil	ASTLLDVTAWCPERPRMRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPYAPEVVLPEAA
Ga0190270_100426973	3300018469	Soil	VPWWLLRVGDVADVTIPANTVLNLTGVCPEHPRTRRAPRLRLVSIFRQGWVTLLVALLRHEPLLPGRLVPEFWPVSPPLEEVPTPVRGIPKAACRIPGE
Ga0180116_10200452	3300019229	Groundwater Sediment	WLRSVGGAAEETIPVSTLLDVTGVCSVRPRPRRATRLRLVSVVRQGWVRRLVALLRQDPLPEGRLVPEPWPVVPPLLEEVCELAMAMPEAA
Ga0184648_11798732	3300019249	Groundwater Sediment	MCPERPRTRRATRLRLVSVFRQGWVTLLVALLRHESMPQGRFVPEPWPVVPPLEEEVPVLVRAMPKAA
Ga0184646_15055581	3300019259	Groundwater Sediment	VTALCPGRTRRATRLRLVRVFRQGWVRLLVALLRHEPLPQGRFVPEPWPAVPAWEDEAREPVMILPKAA
Ga0187893_109668841	3300019487	Microbial Mat On Rocks	PRSRRATRLRLVSVFRQGWVELLVALLRQEPLPQGRFVPEPWPVVPALEDAGGAPAMALPEAA
Ga0209827_105120792	3300025149	Thermal Springs	CPGHPRSRRATRLRLVSVFRQGWVALLVALLRQEPLPEGRFVPEPWPAVPALEDEACEPAMALPEAA
Ga0207653_103278812	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPASTLLAVTLLGPERPRSRRATRLRLVSVLRQGWVELWVALLRQDPLPQGRFVPAPWPTVPALEDEACEPAMTLPEAA
Ga0207684_106109002	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPASTLLAVTLLGPERPRSRRATRLRLVSVLRQGWVELWVALLRQAPFPQGRFVPAPWPTVPALEDEACEPAMTLPEAA
Ga0207646_100839271	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LVSVFRQGWVRLRVALLRQAPLPEGRFVPEPWPVVPPLIEEVCELALAMPAAA
Ga0207687_112933651	3300025927	Miscanthus Rhizosphere	TLLDVTALCPGRPRTRRATRLRLVSGWRPGGVELWVAWLRQEPLPQGRFVPEPWPAVPALEDEVCAPAMPLPEAA
Ga0207687_113403912	3300025927	Miscanthus Rhizosphere	PASTLGDIIALCPGRPRMRRATRLRLVSGFRQSWVALLVALLRHEPWPQGHFVPEPWPTVPALEDEACEPAMTLPAAA
Ga0207670_104390921	3300025936	Switchgrass Rhizosphere	MPASTLLDVTALCPGRPRTRRATRLRLVSGWRPGGVELWVAWLRQEPLPQGRFVPEPWPVVPALEDEVC
Ga0209237_10899542	3300026297	Grasslands Soil	AAAAETMPASTLLDVTALCPGRPRTRRATRLRLVSVFRQGWVALLVALLRQEPLPQGHFVPEPWPAVPAWADETGEPPLALPEAA
Ga0209761_11472362	3300026313	Grasslands Soil	LDVTALCPGHPRSRRATRLRLVSVFRQGWVALLVALLRQEPLPEGRFVPEPWPAVPALEDEACEPAMALPEAA
Ga0209843_10754182	3300027511	Groundwater Sand	QPQAGRPRTRRATRLRLVRVFRQGWVTLLVALLRHEPMPQGRFVPEPWPVVPPLEEEVSDPVRGMPKAA
Ga0209382_106511852	3300027909	Populus Rhizosphere	MTALCPGRPRTRRATRLRLVSVFRQGWVELLVALLRQEPLPQGCFVPEPWPAVPALEDEACAPVMTLPEAA
Ga0209382_110208811	3300027909	Populus Rhizosphere	TIPASTLLDVTALCPGRLRTRRATRLRLVSVFRQGWVELVVALLRHEPLPQGRFIPEPWPAGPALKDPARTRTR
Ga0247827_109914701	3300028889	Soil	HSRAVATIPASTLLDVTVWCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPGAA
Ga0247648_10502731	3300030574	Soil	FFFLVTALFPNRPRPRRATRLRPVSVFRQGWVALLVALLRHDPLPQGRFVPEPWPAVPALEDAAYEPAMALPAAA
Ga0268386_103922781	3300030619	Soil	VGGAAEETVPASTLLDVTALCPSRPRMRRATRLRLVSVFRQGWVALLMALLRHDPLPPGRFVLEPWPAVPPWEEEV
Ga0247655_102654382	3300030621	Soil	PASTLLDVTALCPGRPRTRRATRLRLVSVFRQGWVALLVALLRQEPLPEGRFVPEPWPAVPAWEEAPCESRRALPEAA
Ga0308204_103433831	3300031092	Soil	LRQGWITLRVALLRQEPVPQGHVVPAPWPAVPAWEEEARAPQLAMPKAA
Ga0308187_102776702	3300031114	Soil	PVSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGHFVPEPWPVVPPLLEEVGELALAMPEAA
Ga0306917_101052142	3300031719	Soil	RATRLRLVSVFRQGWVALLVALLRQEPVPQGRFVPEPWPAVPPWAEEAPEPQLALPKAA
Ga0307473_100557423	3300031820	Hardwood Forest Soil	MPASTLLDVTLLGPERPRSRRATRLRLVSVLRQGWVELWVALLRQDPLPQGRFVPAPWPTVPALEDEACEPAMTLPEAA
Ga0310917_108861541	3300031833	Soil	TRLRLVSVFRQGWVRLLVALLRQDPLPEGRLVPEPWPTVPPLEEGPSESPVALPDAA
Ga0306923_113105021	3300031910	Soil	TLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQAPLPEGRLVPEPWPTVPPLEEGTSESPVALPDAA
Ga0306926_114526172	3300031954	Soil	RPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGRLVPEPWPTVPPLEEGTSEPPVALPDAA
Ga0306922_101523505	3300032001	Soil	EADATIPASTLLDVTAWCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLEPEPWPIVPPLAGDPYAPEVVLPEAA
Ga0307470_110057591	3300032174	Hardwood Forest Soil	STLLDVTGWCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQSRLVPEPWPAVPPLAGDPDAPAVVLPEAA
Ga0306920_1032272041	3300032261	Soil	RTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGRLVPEPWPTVPPLEEGTSESPVALPDAA
Ga0314781_003202_1685_1894	3300034660	Soil	VWCPERPRTRRATRRRLVSVFRQGWVRLLVALLRQEPWPQGRLVPEPWPAVPPLAGDPDAPEVVLPGAA
Ga0314783_169664_2_190	3300034662	Soil	RTRRATRLRLVSVFRQGWVRLLVALLRQEPLPQGRLVPEPWPAVPPLAGDPDAPEVVLPGAA
Ga0370541_063834_3_254	3300034680	Soil	AEETIPVSTLLDVTGLCPERPRTRRATRLRLVSVFRQGWVRLLVALLRQDPLPEGHFVPEPWPVVPPLLEEVDELALTMPEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences