Metagenome / Metatranscriptome Family F055574

Basic Information
Family ID	F055574
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	70 residues
Representative Sequence	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALERR
Number of Associated Samples	117
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.06 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (98.551 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.638 % of family members)
Environment Ontology (ENVO)	Unclassified (49.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.797 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF08281	Sigma70_r4_2	96.38
PF04542	Sigma70_r2	1.45
PF07980	SusD_RagB	0.72
PF16561	AMPK1_CBM	0.72
PF07715	Plug	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.45
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.45
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.45
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.45

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	40.58 %
Unclassified	root	N/A	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	40.58 %
Unclassified	root	N/A	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	23.91 %
Unclassified	root	N/A	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	23.91 %
Unclassified	root	N/A	1.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1373253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1271	Open in IMG/M
3300002558\|JGI25385J37094_10108183	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300002560\|JGI25383J37093_10133316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300002911\|JGI25390J43892_10106340	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300004281\|Ga0066397_10163168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300004480\|Ga0062592_101722951	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005172\|Ga0066683_10096377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1791	Open in IMG/M
3300005172\|Ga0066683_10322303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300005172\|Ga0066683_10832724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300005178\|Ga0066688_10765266	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005184\|Ga0066671_10067181	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300005186\|Ga0066676_10357500	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005186\|Ga0066676_10459610	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005440\|Ga0070705_100478817	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005440\|Ga0070705_101430289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300005444\|Ga0070694_101745632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300005446\|Ga0066686_10965045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300005471\|Ga0070698_101541829	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005546\|Ga0070696_100288184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1254	Open in IMG/M
3300005549\|Ga0070704_100723313	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005549\|Ga0070704_101351066	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005549\|Ga0070704_102264015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300005555\|Ga0066692_10398711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	872	Open in IMG/M
3300005555\|Ga0066692_10788275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300005556\|Ga0066707_10200953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1286	Open in IMG/M
3300005561\|Ga0066699_10626030	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005566\|Ga0066693_10500773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300005574\|Ga0066694_10146425	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005586\|Ga0066691_10857345	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005598\|Ga0066706_10007862	All Organisms → cellular organisms → Bacteria	5607	Open in IMG/M
3300005598\|Ga0066706_11301797	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005718\|Ga0068866_10976478	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300006031\|Ga0066651_10034731	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300006032\|Ga0066696_10200623	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300006034\|Ga0066656_10045822	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300006797\|Ga0066659_11085619	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006844\|Ga0075428_100823365	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006845\|Ga0075421_101969216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300006852\|Ga0075433_10636783	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006903\|Ga0075426_10386045	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300006903\|Ga0075426_11088952	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006914\|Ga0075436_101078541	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300007258\|Ga0099793_10286869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300007265\|Ga0099794_10448082	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009012\|Ga0066710_100129313	All Organisms → cellular organisms → Bacteria	3463	Open in IMG/M
3300009089\|Ga0099828_10985752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300009090\|Ga0099827_10119466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2121	Open in IMG/M
3300009090\|Ga0099827_10270791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1432	Open in IMG/M
3300009090\|Ga0099827_11348511	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009137\|Ga0066709_100308066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2155	Open in IMG/M
3300010047\|Ga0126382_11714394	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010085\|Ga0127445_1028909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300010111\|Ga0127491_1084484	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010320\|Ga0134109_10094098	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300010320\|Ga0134109_10340731	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300010326\|Ga0134065_10327582	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010337\|Ga0134062_10462984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300010396\|Ga0134126_10380493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1642	Open in IMG/M
3300010397\|Ga0134124_10552042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1122	Open in IMG/M
3300011269\|Ga0137392_11577823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300011435\|Ga0137426_1001094	All Organisms → cellular organisms → Bacteria	5982	Open in IMG/M
3300012199\|Ga0137383_10171331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1591	Open in IMG/M
3300012200\|Ga0137382_11133271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300012201\|Ga0137365_10677505	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012202\|Ga0137363_11683297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300012206\|Ga0137380_10356676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1304	Open in IMG/M
3300012206\|Ga0137380_11241413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300012206\|Ga0137380_11328471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300012208\|Ga0137376_10108276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2361	Open in IMG/M
3300012209\|Ga0137379_10636878	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300012349\|Ga0137387_11079894	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012362\|Ga0137361_10201009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1803	Open in IMG/M
3300012363\|Ga0137390_10314297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1548	Open in IMG/M
3300012385\|Ga0134023_1273236	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300012386\|Ga0134046_1286121	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012398\|Ga0134051_1001282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300012400\|Ga0134048_1338249	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300012403\|Ga0134049_1260160	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012409\|Ga0134045_1376185	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012532\|Ga0137373_10897173	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012683\|Ga0137398_10727680	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012685\|Ga0137397_10520174	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012917\|Ga0137395_10808375	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012925\|Ga0137419_10074670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2271	Open in IMG/M
3300012925\|Ga0137419_10559100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	915	Open in IMG/M
3300012925\|Ga0137419_11308295	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012927\|Ga0137416_10079540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2406	Open in IMG/M
3300012930\|Ga0137407_10524817	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300012944\|Ga0137410_10153964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1753	Open in IMG/M
3300012944\|Ga0137410_10217107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1487	Open in IMG/M
3300012972\|Ga0134077_10168146	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300014157\|Ga0134078_10348982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300014166\|Ga0134079_10641741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300014882\|Ga0180069_1122430	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300015054\|Ga0137420_1294747	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300015200\|Ga0173480_10301179	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300015242\|Ga0137412_10314520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1225	Open in IMG/M
3300015358\|Ga0134089_10235397	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300015359\|Ga0134085_10324402	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300017657\|Ga0134074_1081745	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300017657\|Ga0134074_1112730	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300017657\|Ga0134074_1340102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300017659\|Ga0134083_10304434	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300018078\|Ga0184612_10093822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1570	Open in IMG/M
3300018084\|Ga0184629_10178886	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300018431\|Ga0066655_10273745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1089	Open in IMG/M
3300018468\|Ga0066662_10621274	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300018482\|Ga0066669_11680805	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300019233\|Ga0184645_1017044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300019259\|Ga0184646_1522284	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300020018\|Ga0193721_1044316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1174	Open in IMG/M
3300025910\|Ga0207684_10184242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1800	Open in IMG/M
3300026277\|Ga0209350_1086303	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026297\|Ga0209237_1231710	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300026300\|Ga0209027_1171301	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300026300\|Ga0209027_1235219	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300026304\|Ga0209240_1146601	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300026313\|Ga0209761_1033329	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300026324\|Ga0209470_1163063	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300026327\|Ga0209266_1005130	All Organisms → cellular organisms → Bacteria → Proteobacteria	7884	Open in IMG/M
3300026332\|Ga0209803_1368009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300026333\|Ga0209158_1258808	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026527\|Ga0209059_1043710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1989	Open in IMG/M
3300026530\|Ga0209807_1305993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300026536\|Ga0209058_1067612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1932	Open in IMG/M
3300026540\|Ga0209376_1123422	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300026548\|Ga0209161_10030950	All Organisms → cellular organisms → Bacteria	3693	Open in IMG/M
3300026550\|Ga0209474_10204459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1256	Open in IMG/M
3300026551\|Ga0209648_10590899	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027646\|Ga0209466_1097157	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300027840\|Ga0209683_10183960	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300027882\|Ga0209590_10156051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1419	Open in IMG/M
3300027903\|Ga0209488_10563736	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027961\|Ga0209853_1071514	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300028884\|Ga0307308_10169173	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300033813\|Ga0364928_0081065	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.20%
Host-Associated	Host-Associated	5.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.13%
Plants	Host-Associated → Plants	5.80%
Aquatic	Environmental → Aquatic	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.07%
Sediment	Environmental → Aquatic → Sediment	2.90%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_13732534	3300000881	Soil	MSEREFHSFVKQLLDGDITIADLPAELRAEGEEALRLLAAVDRRPVQLDGLTARVMAQIAERPKRKFWRRVLEPR
JGI25385J37094_101081832	3300002558	Grasslands Soil	MSDRDFHPLVKQLLDGDLTLADLPAELRAEGEEALRLLAAADRTPVSVPAVTWRVMAALERRRRRVRLWLLAPALALA
JGI25383J37093_101333161	3300002560	Grasslands Soil	MNGHELHPLVKQLLDGDITLADLPAELRAEGEAAVRLLAGVDRTDVSMPAVTWRVMAKLERRRRRFVPWLLAPALAIAAALVLW
JGI25390J43892_101063401	3300002911	Grasslands Soil	MSDFHPLVKQLLDGELTLAELPAELRAEGEEALRLIGAVDRDPVQLPRITQTVM
Ga0066397_101631681	3300004281	Tropical Forest Soil	MTQHEFDPRVKQLLDGELTLADLPAELRAEGEEALRLLAAVDRASVSVPAVTWRVMAALERRRRRLWWL
Ga0062592_1017229512	3300004480	Soil	MSQREFHSFVKQLLDGDITIADLPAELRAEGEEALRLLAAVDRRPVQLDGLTARVMAQIA
Ga0066683_100963774	3300005172	Soil	MSGHDFNPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFLPWLLAPALAIAAALVILLR
Ga0066683_103223032	3300005172	Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSVPAVTWRVMAALERRRQRVRRSWLLVPALAMAAALVLWIVRPSAVGPSA
Ga0066683_108327242	3300005172	Soil	MSGHEFHPLVKQLLDGDITLADLPAELRAEGEEALRLLARVARTDVTMPAVTWRVMAALERRRRRF
Ga0066688_107652661	3300005178	Soil	MSDHDFHPLVKQLLDGDLTLAELPAELRAEGEEALRLLAAADRTPVSMPAVTWR
Ga0066671_100671815	3300005184	Soil	VSEREFHPEVKRLLDGEITIAELPLELRAEGEEALRLLAAVDRSLIAVP
Ga0066676_103575002	3300005186	Soil	MSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFLPWLLAPALAIAAALVILLR
Ga0066676_104596101	3300005186	Soil	MSGHELHPLVKQLLDGDITLADLPAELRAEGEAALGLLAGVDRTDVSMPAVTWRVMAKLERRRRRF
Ga0070705_1004788173	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDHDFHPLVKQLLDGDLTLAELPAELRAEGEEALRLLAAADRTPVSMPAVTWRVMAALERRRRRIRPWLLAP
Ga0070705_1014302892	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSGREFHPLVKQLLDGDITLADLPAELRAEGEEALQLLAAVDRSPVELPAVPQRVMWSLAREPKRSLGRRLIARS
Ga0070694_1017456321	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSERDFHPLVKQLLDGDITIADLPAELRAEGDEALRLLAELDRRPVELPDLTARVMATIAEH
Ga0066686_109650452	3300005446	Soil	MSGHEFHPLVKQLLDGDITLADLPAELRAEGEEALRLLARVARTDVTMPAVTWRVMAALERRRRRFLPWLLAP
Ga0070698_1015418292	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHEFHPLVKQLLDGDITLADLPAELRAEGQEALQLLAGVERTSVSMPAVTWRVMTALERRRRRFRPWLLAPALAAAA
Ga0070696_1002881844	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSEREFHPLVKQLLDGDITLADLPAELRAEGEEALQLLAAVDRSPVELPAVPQ
Ga0070704_1007233131	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSEREFHPLVKQLLDGDITLADLPAELRAEGEEALLILGAVDRRPVQLGDFTARVMAQ
Ga0070704_1013510662	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHEFHPLVKQLLDGDITLADLPAELRAEGQEALQLLAGVERTSVSMPAVTWRVMTALERRRRRF
Ga0070704_1022640152	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTDFHPLVKQLLDGDITLADLPAALRAEGEEALRLLRAVDRTPVQLPRVTDRVMGG
Ga0066692_103987111	3300005555	Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSVPAVTWRVMAALERRRQRVRRSWLLVPALAMAAALVLWIVRPSAVGPSAA
Ga0066692_107882752	3300005555	Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEAAVRLLAGVDRTDVSMPAVTWRVMAKLERRRRRFVPWLLAPALAIAAALVLWLAPRTP
Ga0066707_102009531	3300005556	Soil	MSEREFHPDVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRSPVSISAVTWRVMA
Ga0066699_106260301	3300005561	Soil	VSEREFHPEVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRTSVAVPAVTWRVMAALERRRRRLVPWLLVPALAAAA
Ga0066693_105007732	3300005566	Soil	MTEHERDFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDLRPVAVPSVTWRVMANIE
Ga0066694_101464251	3300005574	Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSVVSVPAVTWR
Ga0066691_108573451	3300005586	Soil	MSEREFHPDVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRSPVSISAVTWRVMAALERRRQRVRWSWLLVPALAMAAALVLWIDRPSG
Ga0066706_100078621	3300005598	Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPA
Ga0066706_113017972	3300005598	Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAGVDRTPVSLPAVTWRVMAALERRRQRVRWSWLLVPALAMAAALVLWIGRPS
Ga0068866_109764782	3300005718	Miscanthus Rhizosphere	MSEREFHPLVKQLLDGDITLADLPAELRAEGEEALLILGAVDRRPVQLGDFTARVMAQVVERPRRQFWRR
Ga0066651_100347315	3300006031	Soil	MSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFLPWLLAPALAIAAALVILLRPT
Ga0066696_102006233	3300006032	Soil	MTEHSERQFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDRRPVGVPSVTWRVMANIERRRRRVLPWLLAPALALAAVLVL
Ga0066656_100458225	3300006034	Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRPEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAP
Ga0066659_110856191	3300006797	Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALERRRRPVLPWLLAPALALAAALILWILPAKPAT
Ga0075428_1008233651	3300006844	Populus Rhizosphere	MTQHEFHPRVKQLLDGELTLADLPAELRAEGEEALRLLAAVDRSSVSVPAVTWRVMAAIERRRRRPALWWLAPAVAAAAAVVLLLG
Ga0075421_1019692161	3300006845	Populus Rhizosphere	MSKRDFHPLVKQLLDGDITIADLPAELRSEGEEAVRLLAALDRRPVELPDLTARVMATIAERPG
Ga0075433_106367831	3300006852	Populus Rhizosphere	MSEREFHPLVKQLLDGDITLGELPAELRAEGEEALQLLGMVDRSAVAVPAVTWRVMARLENRRRRALPWLLAPALALAAALAVWLLTAKP
Ga0075433_118027851	3300006852	Populus Rhizosphere	MTEREFHPQVKQLLDGELTLADLPAELRDEGEEALRLLAAVDREPVSVPSVTWRVMARLERKRQRRLAWLLAPALAAAAALLVWLGRPASPVASAPGSMVT
Ga0075426_103860451	3300006903	Populus Rhizosphere	MSEHDFHPLVKQLLDGDLTLADLPAELRAEGEEALSLLAAVDREIVAMPAVTWRVMATLERRRRRLRPWLL
Ga0075426_110889522	3300006903	Populus Rhizosphere	MSDREFHPLVKQLLDGDLTIADLPAELRAEGEEALALLAAVDRTPVSVPAVTWRVMAALASRRRR
Ga0075436_1010785411	3300006914	Populus Rhizosphere	MSDREFHPLVKQLLDGDLTIADLPAELRAEGEEALALLAAVDRTPVSVPAVTWRVMAALTSRRRRMRT
Ga0099793_102868692	3300007258	Vadose Zone Soil	MSGHDFHPLIKQLLDGDITLADLPAELHAEGKAALRLLAAVDRTDVSMPAVTWRVMAALE
Ga0099794_104480821	3300007265	Vadose Zone Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEAALRLLGAVDRTDVSVPAVTWRVMG
Ga0066710_1001293131	3300009012	Grasslands Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALERR
Ga0099828_109857522	3300009089	Vadose Zone Soil	MSDHDFHPLVKQLLDGDLTLAELPAELRAEGEEALRLLAAADRTPVSMPAVTWRVMAALERRRRRIRPWLLAPALAIAAAFILWIWP
Ga0099827_101194665	3300009090	Vadose Zone Soil	MSKHEFHPLVKQLLDGDITLADLPPELRAEGDEALRLLAAVDRSPVQLSAVSEHVMQAIAQRPARSVWRR
Ga0099827_102707914	3300009090	Vadose Zone Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALE
Ga0099827_113485111	3300009090	Vadose Zone Soil	MSDHDFHPLVKQLLDGDLTIADLPAERSADAEEALRLLAAADRRPVEVPGVVHRVMHALESRPAPRRPR
Ga0066709_1003080665	3300009137	Grasslands Soil	MSGRDFHPLVKQLLDGDITLADLPTELRAEGEDALRLLAAVDRRDVSAPAVTWRVMAALERRRRRVLPWLLA
Ga0126382_117143942	3300010047	Tropical Forest Soil	MSEREYHPLVKQLLDGEITLAELPADLRAQGEEALRLLGVVDRSPVSLPSVTWRVMARLENRRR
Ga0127445_10289091	3300010085	Grasslands Soil	MSGHDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAPAAP
Ga0127491_10844841	3300010111	Grasslands Soil	MSGHEFNPLVKQLLDGDITLADLPSELRAEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFL
Ga0134070_102001802	3300010301	Grasslands Soil	MTKHEFDPQVKQLLDGELTLADLPAELRQEGDEALRLLAAVDREPLSLPAVTWRVMATLERRRQRRLTWLLAPALAAAAALALWFGRPANPPAAASSAMVTVRF
Ga0134109_100940981	3300010320	Grasslands Soil	MSEHEYHPLVKQLLDGDITSAELPAELRVQGEEALRLLGLVDRTPVAVPDVTW
Ga0134109_103407311	3300010320	Grasslands Soil	MSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTDISMPAVTWRVMATLERRRRRFLPWLLAP
Ga0134065_103275821	3300010326	Grasslands Soil	MTKREFDPQVKQLLDGELTLADLPAELRQEGEEALRLLAAVDREPLSLPAVTW
Ga0134062_104629841	3300010337	Grasslands Soil	MSEHEYHPLVKQLLDGEITLAELPAELRAEGEAALQLLGMVDRSTVSVPAVTWRVMARLENRRRRALPWLLAPALALAAALAVWL
Ga0134126_103804931	3300010396	Terrestrial Soil	MSEHEFHPLVKQLLDGDITLADLPAELRAEGQEALQLLAGVERTSVSMPAVTWRVMTALERRRRRFRPWLLAPALAAAAALV
Ga0134124_105520423	3300010397	Terrestrial Soil	MSEREFHPLVKQLLDGDVTLADLPAELRAEGEEALLILGAVDRRPVQLGDFTARVMAQIVERPRRQFWRRVLEPR
Ga0137392_115778232	3300011269	Vadose Zone Soil	MSGRDFHPLVKQLLDGDITLADLPTELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALERRRRRVLPWLL
Ga0137426_10010947	3300011435	Soil	MSERDFHPLVKQLLDGDITIADLPAELRAEGEEALRLLAALDRRPVELPDLTARVMATIAERPGRRFW
Ga0137383_101713311	3300012199	Vadose Zone Soil	MNEREFHPDVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRSPVSIPAVTWRV
Ga0137382_111332711	3300012200	Vadose Zone Soil	MSEQREREFHPLVKQLLDGDITLADLPAELRAEGEEALRLLGDLDLRPVAVPSVTWRVMANIERRRRRVLPWLLAPALALAAV
Ga0137365_106775051	3300012201	Vadose Zone Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSVVSVPAVTWRVMAGLERRRRRVRPWLLAPALA
Ga0137363_116832972	3300012202	Vadose Zone Soil	MNEHEFHPLVQQLLDGDITIADLPAELRAEGEEALRLLAAVDRSPVSLPAIPQRVMRALTRPPQRFPRWLLAPALALAAALV
Ga0137380_103566763	3300012206	Vadose Zone Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGKEALRLLAAVDRSVVSVPAVTWRVMAGLERRRRRVR
Ga0137380_112414132	3300012206	Vadose Zone Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEAALRLLAAVDRTPVSVPAVTWRVMAALERRRRRVLPWLLAPALAIAAALVIWLRPA
Ga0137380_113284712	3300012206	Vadose Zone Soil	MSAYDFHPLVKQLLDGDITIADLPAELRAEGEEALRLLAAVDRSPVTLPAIPQRVMRALTRPPQRLPRWLLAPALA
Ga0137376_101082761	3300012208	Vadose Zone Soil	MSGHDFHPLVKQLLDGDITLADLPPELRGEGEAALRLLAAVDRTEISMPAVTWRVMTTLERRRRRFLPWLLAPALAI
Ga0137379_106368783	3300012209	Vadose Zone Soil	MSAYDFHPLVKQLLDGDIAIADLPAELRAEGEAALRLLAAVDRSPVALPAV
Ga0137387_110798941	3300012349	Vadose Zone Soil	MSGRDFHPLVKQLLDGDITLADLPTELRAEGEDALRLLAAIDRTDVSVPAVTWRVMAALERRRRRVLPWL
Ga0137361_102010095	3300012362	Vadose Zone Soil	MSGRDFHPLVKQLLDGDITLADLPPELRAEGEDALRLLAAVDRTDVSAPAVTWRVMAALERRRRR
Ga0137390_103142974	3300012363	Vadose Zone Soil	MSDHDFHPLVKQLLDGDLTLAELPAELRAEGEEALRLLAAADRTPVSMPAVTWRVMAALERRRRRIRPWLLAPALAIAAAFILWIWPARL
Ga0134023_12732362	3300012385	Grasslands Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAPAAP
Ga0134046_12861212	3300012386	Grasslands Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAPAA
Ga0134051_10012821	3300012398	Grasslands Soil	MSGHEFNPLVKQLLDGDITLADLPSELRAEGEAALRLLAAVDRTEISMPAVTWRVMTTLERRRRRFLPWLLAPALAIAAALVILL
Ga0134048_13382492	3300012400	Grasslands Soil	MSERDFHPLVKQLLDGEVTIADLPAELRAEGEEALRLLTGVDRSPVELPAVTRRVMQTL
Ga0134049_12601602	3300012403	Grasslands Soil	MSKHEFHPLVKQLLDGDITLADLPPELRAEGEAALRLLAAVDRRAVSVPAVTWRVMAALE
Ga0134045_13761851	3300012409	Grasslands Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAPAAPLPPVPA
Ga0137373_108971731	3300012532	Vadose Zone Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSVVSVPAVTWRVMAGLERRRRRVRPWLLAPALALAAAL
Ga0137398_107276801	3300012683	Vadose Zone Soil	MSEHEFHPLVKQLLDGDITLADLPAELRAEGEEALQLLAGVERTSVSMPAVTWRVMTALERRRRRFRPWLLAPALAAA
Ga0137397_105201741	3300012685	Vadose Zone Soil	MSEHEYHPLVKQLLDGDITFAELPAELRVQGEDALRLLGLVDRTPVTVPDVTW
Ga0137395_108083751	3300012917	Vadose Zone Soil	MNEREFHPDVKRLLDGEITIADLPLELRAEGDEALRLLAAVDRSPVSTPAVTWRVMAALERRRQRVR
Ga0137419_100746704	3300012925	Vadose Zone Soil	MSGHELHPLVKQLLDGDITLADLPAELRAEGEAALRLLAGVDRTDVSMPAVTWRVMAKLEGRRR
Ga0137419_105591001	3300012925	Vadose Zone Soil	MSGHDFHPLIKQLLDGDITLADLPAELHAEGEAALRLLAAVDRTDVSMPAVTWRVMAALERRRRRFLPWLLAPAFAIAAALVIWLRPGTPPPSAA
Ga0137419_113082952	3300012925	Vadose Zone Soil	MSGNEFHPLVKQLLDGDITLADLPPELRAEGEAALRLLAAVDRTDISVPAVTWRVMATLE
Ga0137416_100795404	3300012927	Vadose Zone Soil	MSGHEFHPLIKQLLDGDITLADLPPELRGEGGAALRPLAAVDRTHISMPAVTCRVMTKLERRR
Ga0137407_105248173	3300012930	Vadose Zone Soil	MSGHEFHPLVKQLLDGDITLADLPAELRAEGEAALRLLAGVDRTDVSMPAVTWRVMAQLERRRRRFL
Ga0137410_101539644	3300012944	Vadose Zone Soil	MSGHDFHPLIKQLLDGDVTLADLPAELHAEGEAALRLLAAVDRTDVSMPAVTWRVMAA
Ga0137410_102171073	3300012944	Vadose Zone Soil	MSGHEFNPLVKELLDGDITLADLPSELRGEGEAALRLLAAVDRTDISMPAVTWRVMTTLE
Ga0134077_101681461	3300012972	Grasslands Soil	MSGHELHPLVTQLLDGDITLADLPAELRAEGESALRLLAGVDRTNVSMPAVTWRVMAKLERRRRRFL
Ga0134078_103489821	3300014157	Grasslands Soil	MSGHDFNPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFLPWLLA
Ga0134079_106417411	3300014166	Grasslands Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSIVSVPAVTWRVMAGLERRRRRVRSWLLA
Ga0180069_11224301	3300014882	Soil	MSERDFHPLVKQLLDGDITITELPAELRREGEEALQLVAAVDRRPVELPAVPDRVMRALVRAPQRSAVRRLLERP
Ga0137420_12947473	3300015054	Vadose Zone Soil	MSGHDFHPLIKQLLDGDITLADLPAELHAEGEAALRLLAGVDRTDVSMPAVTWRVMAALERR
Ga0173480_103011792	3300015200	Soil	MSEREFHPLVKQLLDGDITLADLPAELRAEGEEALLILGAVDRRPVQLGDFTARVMAQIVERPRRQFWRRVLEP
Ga0137412_103145201	3300015242	Vadose Zone Soil	MSGYEFHPLVKQLLDGDITLADLPPELRGEGEAALRLLAAVDRTDISMPAVTWRVMT
Ga0134089_102353972	3300015358	Grasslands Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSVPAVTWRVMAALE
Ga0134085_103244021	3300015359	Grasslands Soil	MSGHEFHPLVKQLLDGDITLADLPAELRAEGEEALRLLARVARTDVTMPAVTWRVMAALERRRRRFLPW
Ga0134074_10817453	3300017657	Grasslands Soil	MTKREFDPQVKQLLDGELTLADLPAELRQEGEEALRLLAAVDREPLSLPAVTWRVMATLERRRQRRLTWLLAPALAAAAAL
Ga0134074_11127301	3300017657	Grasslands Soil	MSEHDFHPLVKQLLDGDVTLADLPPELRAEGEAALRLLAAVDRRAVSVPAVTW
Ga0134074_13401021	3300017657	Grasslands Soil	MSGHEFHPLVKQLLDGDITLADLPAELRAEGEEALRLLARVARTDVTMPAVTWRVMAALERRRRRFLPWLLAPALAIA
Ga0134083_103044342	3300017659	Grasslands Soil	MTKHEFDPQVKQLLDGELTLADLPAELRQEGQEALRLLAAVDREPLSLPAVTWRVMATLERR
Ga0184612_100938224	3300018078	Groundwater Sediment	MSQRVFHPLVKLLLDGDITLADLPAELRREGEEAMRLLGAVDRRPVKLPEMSQRVMQA
Ga0184629_101788861	3300018084	Groundwater Sediment	MSGREFHPLVKQLLDGDITLADLPAELRPEGEEALRLLAAVDRGSVELPAVPGRVMRSLVRAPSRSRP
Ga0066655_102737453	3300018431	Grasslands Soil	MSGHELHPLVKQLLDGDITLADLPAELRAEGEAAVRLLAGVDRTDVSMPAVTWRVMAKLERRRRRFMPWLLAPALAIAAALVLWLVPR
Ga0066662_106212742	3300018468	Grasslands Soil	MNEREFRPDVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRSPVSIPAVTWRVMAALERRRQRVRWSWLLVPALAMAAALVLWI
Ga0066669_116808052	3300018482	Grasslands Soil	MSEHEFHPLVKQLLDGDITLAALPPELRAEGEEALRLLAAVDRSVVSVPAVTWRVMAGLERRR
Ga0184645_10170441	3300019233	Groundwater Sediment	VTAKDFHPLVKQLLDGEVTLADLPPELRADGAEALGLLAAVDRRPVTLPAAIDA
Ga0184646_15222842	3300019259	Groundwater Sediment	MNGREFHPLVKQLLDGDITLADLPAELRAEGEEALRLLAAVDHSAVELPAVPARVMR
Ga0193721_10443161	3300020018	Soil	MSGHEFHPQVKQLLDGDITLADLPAELRAEGGEALRLLAGLDRTDVAMPAVTWRVMAALERRRRRYLPWLLAPALAAAAVLVLWLRPGTPPPS
Ga0207684_101842421	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHEFHPLVKQLLDGDITLADLPADLRAEGEEALRLLAAVDRSVVSVPAVTWRVMAGLEQR
Ga0209350_10863031	3300026277	Grasslands Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSLPAVTWRVMAALERRRQRVRWSWLL
Ga0209237_12317101	3300026297	Grasslands Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVT
Ga0209027_11713011	3300026300	Grasslands Soil	MSGHEFHPLVKQLLDGDITRADLPAELRAEGEEALRLLAGVERTDVSMPAVTW
Ga0209027_12352191	3300026300	Grasslands Soil	MTERSEREFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDLRPVAVPSVTWRVMA
Ga0209240_11466011	3300026304	Grasslands Soil	MSGYEFHPLVKQLLDGDITLADLPPELRGEGEAALRLLAAVDRTDISMPAVTWRV
Ga0209761_10333291	3300026313	Grasslands Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSLPA
Ga0209470_11630631	3300026324	Soil	MSGHDFHPLVKQLLDGDITLADLPSELRVEGEAALRLLAAVDRTEISMPAVTWRVMATLERRRRRFLPWLLAPALAIAAALVILL
Ga0209266_10051301	3300026327	Soil	MNEREFHPEVRRLLDGEITIADLPLELRVEGEEALRLLAAVDRTPVSVPAVTWRVMAALERRRQRVRRSWLLVPALAMAAALVLWIVRPSAVGPSAAS
Ga0209803_13680092	3300026332	Soil	MSDHDFHPLVMQLLDGDLTIADLPAELRAQGEEALRLLAAVDRRPVEVPGVVQRVM
Ga0209158_12588081	3300026333	Soil	MSGHELHPLVKQLLDGDITLADLPAELRAEGEAALRLLAGVDRTDVSMPAVTWRVMAKLEGRRRRFLPWLLAPALAI
Ga0209059_10437105	3300026527	Soil	VSEREFHPEVKRLLDGEITIAELPLELRAEGEEALRLLAAVDRSLIAVPAVTWRVMAALE
Ga0209807_13059932	3300026530	Soil	MTEHSERQFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDRRPVGVPSVTWRVMANIERRRRRVLPWLLAPALALAAVLV
Ga0209058_10676121	3300026536	Soil	MSEYDFHPLVKQLLDGDITIADLPAELRAEGEEALRLLAAVDRSPVALPAVPQRVMRALTRTPQRSLRWLLAPALALAAALVLWLGG
Ga0209376_11234221	3300026540	Soil	MSGHELHPLVKQLLDGDITLADLPAELRAEGEAALGLLAGVDRTDVSMPAVTWRVMAKLERRRRRFMPWLLAPALAIAAALVVWLVPRTPAP
Ga0209161_100309507	3300026548	Soil	MSGYDFHPLVKQLLDGDLTLADLPVELRAEGEEALRLLTAVDRRPVELPAVTQRVMQTLASRPAPAAPL
Ga0209474_102044593	3300026550	Soil	MTEHSERQFHPLVKQLLDGDITLADLPAELRAEGEEALRLLADLDRRPVGVPSVTWRVMANIERRRRRVLPWLLAPALALA
Ga0209648_105908992	3300026551	Grasslands Soil	MNEREFYPDVKRLLDGEITIADLPLELRAEGEEALRLLAAVDRSPVSTPAVTWRVMAAL
Ga0209466_10971572	3300027646	Tropical Forest Soil	MTQHEFDPRVKQLLDGELTLADLPAELRAEGEEALRLLAAVDRASVSVPAVTWRVMAALERRRRRLWWLAPAVAIAAAL
Ga0209683_101839603	3300027840	Wetland Sediment	MSKSGFHPQVKQLLDGEITLADLPAELRAEGEEALRVLAALDRTPVGMLGMTDRVMRALQRPPRHAPVRRMLERSWVLVPTLAAAAALVLWL
Ga0209590_101560514	3300027882	Vadose Zone Soil	MSGHDFHPLVKQLLDGDITLADLPAELRAEGEDALRLLAAVDRTDVSVPAVTWRVMAALERRRRRVLPWL
Ga0209488_105637362	3300027903	Vadose Zone Soil	MSEHDFHPLVKQLLDGDITLADLPAELRAQGEEALRLLAQVDRSPVALPAVPQ
Ga0209853_10715141	3300027961	Groundwater Sand	MSERDFHPLVKQLLDGDSTTADLPAELRAEGEEALRLLAAVDRSSVELPAVPERVMRALVRAPRRSRPWLLAPALAAAAALVIWLG
Ga0307308_101691731	3300028884	Soil	MSGHDFNPLVKQLLDGDITLADLPPELRGEGEAALRLLAAVDRTDISMPAVTWR
Ga0364928_0081065_1_222	3300033813	Sediment	MSERDFHPLVKQLLDGDITIADLPAELHPEGEEALRLLAAVDRRPVELPAVPDRVMRALVRAPQRSPLRRVIER

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign