NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055567

Metagenome / Metatranscriptome Family F055567

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055567
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 43 residues
Representative Sequence MKRLQFCLVVFAVLALTLSAFAQVQNGQFTGTVTDPTGAAIAN
Number of Associated Samples 117
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.27 %
% of genes near scaffold ends (potentially truncated) 98.55 %
% of genes from short scaffolds (< 2000 bps) 90.58 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.058 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.841 % of family members)
Environment Ontology (ENVO) Unclassified
(28.986 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.101 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.80%    β-sheet: 2.82%    Coil/Unstructured: 63.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF07593UnbV_ASPIC 26.09
PF13517FG-GAP_3 16.67
PF14559TPR_19 1.45
PF01326PPDK_N 0.72
PF08238Sel1 0.72
PF02445NadA 0.72
PF04191PEMT 0.72
PF00370FGGY_N 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0379Quinolinate synthaseCoenzyme transport and metabolism [H] 0.72
COG0574Phosphoenolpyruvate synthase/pyruvate phosphate dikinaseCarbohydrate transport and metabolism [G] 0.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.06 %
UnclassifiedrootN/A15.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001180|JGI12695J13573_1010286All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus639Open in IMG/M
3300004080|Ga0062385_10131164All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1266Open in IMG/M
3300004080|Ga0062385_10783362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae622Open in IMG/M
3300004082|Ga0062384_101115729All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae570Open in IMG/M
3300004152|Ga0062386_100487035All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1000Open in IMG/M
3300004152|Ga0062386_101220571All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus625Open in IMG/M
3300005181|Ga0066678_10657446All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300005332|Ga0066388_102455839All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300005334|Ga0068869_101419268All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis615Open in IMG/M
3300005337|Ga0070682_101504641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300005363|Ga0008090_11966758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300005447|Ga0066689_10115171All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1561Open in IMG/M
3300005575|Ga0066702_10462766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M
3300005712|Ga0070764_11088994Not Available506Open in IMG/M
3300005842|Ga0068858_100992119All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae823Open in IMG/M
3300005884|Ga0075291_1011751All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae985Open in IMG/M
3300006052|Ga0075029_101333463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300006797|Ga0066659_11686388Not Available534Open in IMG/M
3300006800|Ga0066660_10901667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300006854|Ga0075425_102900699Not Available526Open in IMG/M
3300009012|Ga0066710_104036963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300009029|Ga0066793_10825973Not Available526Open in IMG/M
3300009089|Ga0099828_10151477All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2049Open in IMG/M
3300009089|Ga0099828_10515245All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300009090|Ga0099827_10832859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium799Open in IMG/M
3300009137|Ga0066709_103696098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300009147|Ga0114129_12624316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300009545|Ga0105237_12110312Not Available573Open in IMG/M
3300010046|Ga0126384_12153921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300010048|Ga0126373_11043987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium883Open in IMG/M
3300010303|Ga0134082_10155145All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium927Open in IMG/M
3300010325|Ga0134064_10403066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300010339|Ga0074046_10001675All Organisms → cellular organisms → Bacteria19729Open in IMG/M
3300010343|Ga0074044_10748689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300010360|Ga0126372_11855349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300010360|Ga0126372_12352026All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300010373|Ga0134128_12242693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300010376|Ga0126381_100265868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2332Open in IMG/M
3300010379|Ga0136449_101652649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium969Open in IMG/M
3300011270|Ga0137391_10850540All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300011271|Ga0137393_10405751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1167Open in IMG/M
3300011271|Ga0137393_11661711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300012189|Ga0137388_10042828All Organisms → cellular organisms → Bacteria → Acidobacteria3619Open in IMG/M
3300012198|Ga0137364_10484779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium929Open in IMG/M
3300012201|Ga0137365_10574139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium827Open in IMG/M
3300012349|Ga0137387_11124338All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300012360|Ga0137375_11372160All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300012362|Ga0137361_11431025All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300012505|Ga0157339_1056517All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300012923|Ga0137359_10893371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300012927|Ga0137416_11298468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300012930|Ga0137407_10586168All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1046Open in IMG/M
3300012930|Ga0137407_11965518Not Available558Open in IMG/M
3300012944|Ga0137410_11777741Not Available544Open in IMG/M
3300012989|Ga0164305_10171790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1495Open in IMG/M
3300014154|Ga0134075_10444161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300015241|Ga0137418_11242131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300015245|Ga0137409_10176098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1941Open in IMG/M
3300015245|Ga0137409_10555369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300015371|Ga0132258_10111110All Organisms → cellular organisms → Bacteria6488Open in IMG/M
3300015372|Ga0132256_100021334All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5758Open in IMG/M
3300015374|Ga0132255_102492710Not Available790Open in IMG/M
3300017935|Ga0187848_10096686All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1349Open in IMG/M
3300017940|Ga0187853_10274380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300017943|Ga0187819_10747069Not Available550Open in IMG/M
3300017955|Ga0187817_11126627Not Available504Open in IMG/M
3300018006|Ga0187804_10405198All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300018012|Ga0187810_10364007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300018037|Ga0187883_10009750All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5490Open in IMG/M
3300018037|Ga0187883_10678355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300018085|Ga0187772_11192557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300018468|Ga0066662_10282519All Organisms → cellular organisms → Bacteria → Acidobacteria1381Open in IMG/M
3300019882|Ga0193713_1201175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300019890|Ga0193728_1175244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium922Open in IMG/M
3300021420|Ga0210394_11768875All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300021432|Ga0210384_10537381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1052Open in IMG/M
3300021476|Ga0187846_10290698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300021477|Ga0210398_10141600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1955Open in IMG/M
3300021559|Ga0210409_11113977All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300021559|Ga0210409_11445544Not Available563Open in IMG/M
3300025474|Ga0208479_1101858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300025480|Ga0208688_1021736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1637Open in IMG/M
3300025619|Ga0207926_1043724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1272Open in IMG/M
3300025914|Ga0207671_10342541All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium1185Open in IMG/M
3300025923|Ga0207681_10197501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1543Open in IMG/M
3300026023|Ga0207677_10155325All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1771Open in IMG/M
3300026089|Ga0207648_12008434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300026317|Ga0209154_1184330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium827Open in IMG/M
3300026317|Ga0209154_1235311All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300026322|Ga0209687_1296706Not Available512Open in IMG/M
3300026354|Ga0257180_1042811All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300026469|Ga0257169_1020031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium943Open in IMG/M
3300026536|Ga0209058_1104888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1422Open in IMG/M
3300026547|Ga0209156_10455717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300026557|Ga0179587_10638841All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300027590|Ga0209116_1071567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium757Open in IMG/M
3300027610|Ga0209528_1001593All Organisms → cellular organisms → Bacteria → Acidobacteria4513Open in IMG/M
3300027678|Ga0209011_1060955All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1137Open in IMG/M
3300027729|Ga0209248_10129772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300027729|Ga0209248_10215036Not Available565Open in IMG/M
3300027846|Ga0209180_10282112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium953Open in IMG/M
3300027846|Ga0209180_10405451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300027875|Ga0209283_10572243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300027875|Ga0209283_10735750All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300027882|Ga0209590_10667674Not Available666Open in IMG/M
3300027894|Ga0209068_10588657Not Available647Open in IMG/M
3300027911|Ga0209698_10037059All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4400Open in IMG/M
3300027911|Ga0209698_10139947All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1992Open in IMG/M
3300028047|Ga0209526_10309946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1066Open in IMG/M
3300028047|Ga0209526_10501671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium791Open in IMG/M
3300028047|Ga0209526_10636635Not Available679Open in IMG/M
3300028047|Ga0209526_10680982All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300028380|Ga0268265_10361843Not Available1328Open in IMG/M
3300028380|Ga0268265_11321189All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300028560|Ga0302144_10252257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300028673|Ga0257175_1063215Not Available693Open in IMG/M
3300028678|Ga0302165_10011673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2495Open in IMG/M
3300028868|Ga0302163_10134878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300029636|Ga0222749_10173578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1063Open in IMG/M
3300029907|Ga0311329_10077444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2811Open in IMG/M
3300029917|Ga0311326_10018194All Organisms → cellular organisms → Bacteria4327Open in IMG/M
3300030503|Ga0311370_11097648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300030520|Ga0311372_12688039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300030707|Ga0310038_10183237All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300030991|Ga0073994_12370637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300030991|Ga0073994_12394392All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300031344|Ga0265316_10342600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1083Open in IMG/M
3300031740|Ga0307468_101884551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300031740|Ga0307468_102372443Not Available517Open in IMG/M
3300031823|Ga0307478_11113200All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300032160|Ga0311301_11540442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium815Open in IMG/M
3300032160|Ga0311301_11583127Not Available799Open in IMG/M
3300032829|Ga0335070_11191353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300032955|Ga0335076_11741761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300033433|Ga0326726_12221319Not Available533Open in IMG/M
3300033486|Ga0316624_11341929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300034124|Ga0370483_0056647All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1243Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.97%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.80%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.07%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.62%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.90%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.90%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.17%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.17%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.17%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.45%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.45%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.45%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.45%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.45%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.45%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.72%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.72%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001180Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025474Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027610Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028560Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028868Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12695J13573_101028613300001180Forest SoilMKRLQFCLAVFAVLALTLSAFAQVQNGQFDGTVTDPTGAAIANAKVTSPTPRPA*
Ga0062385_1013116413300004080Bog Forest SoilMKRLQFCLVVFAVLALSFSAFAQVQFSQITGTVVDPTGAAIANAKVAVTNTAIDLHLY
Ga0062385_1078336213300004080Bog Forest SoilMKRLQFCLAVFAVLALSLTAFAQIQNGQLTGDISDPSGAAI
Ga0062384_10111572913300004082Bog Forest SoilMKRLQFCLAVFAVLALTSSAFAQVQFSQFTGTVVDQTGATIANAKVT
Ga0062386_10048703523300004152Bog Forest SoilMKRLQFCLVVFAVLALTFSAFAQVQFGQFTGTVTDPTGAAITNAKV
Ga0062386_10122057113300004152Bog Forest SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFDGTVTDPTGAAIGNAKVEVSNPAT
Ga0066684_1087502913300005179SoilMRKLCLCAVSCCFLMFALSAVGQVQNGQFTGTVTDPSGAAIAGAKVMVTN
Ga0066678_1065744613300005181SoilMKNLQLCLVFVSLVFASSNGLAQIQNGQFTGTVSDPTGAAIPNAR
Ga0066388_10245583913300005332Tropical Forest SoilMRRLQFCLAMFALLALACSAFAQVQNGQFEGTVTDPTGAAIANA
Ga0068869_10141926813300005334Miscanthus RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEVTDPSGAAIANAKV
Ga0070682_10150464123300005337Corn RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSGAAIANAK
Ga0008090_1196675813300005363Tropical Rainforest SoilMAMKKLLFLLISLALLAGVAAAQVQNGQFTGTVFDPSGAAIPNAK
Ga0066689_1011517113300005447SoilMKKLQFCLVFFSLLIMVVSAAAQVQNGQFTGTITDPSGAAIANAKVTAV
Ga0066702_1046276623300005575SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFTGTVTDPT
Ga0070764_1108899423300005712SoilMKRLQFCLVVLAVLALTFSAMAQVTSSQFTGTVLDP
Ga0068858_10099211913300005842Switchgrass RhizosphereMKKLQFFLLFVSLLTLSLSAFAQIQNGQFTGTVVDPSGAAIANAKVTV
Ga0075291_101175113300005884Rice Paddy SoilMKNLLISLCVLTFSLCAVAQVQNGEFTGVVTDPTGAAIHDA
Ga0075029_10133346323300006052WatershedsMKRLQFCLVVFAVLALTFSAFAQVQFGQFTGTVTDPSGAAIANAKVSVNNPAIDLNL
Ga0066659_1168638813300006797SoilMKKLQSCLAVVCCSLLLVLSAAAQVQNGQFQGTVTD
Ga0066660_1090166713300006800SoilMKKLQFCLVFLCLLLLALSAAAQVQNGQFTGVVTDTSGAAMANAKVTATN
Ga0075425_10290069923300006854Populus RhizosphereMRRLQFCLAVFALLALTFSAFAQVQNGQLTGIVTDPSGAAIANAK
Ga0066710_10403696313300009012Grasslands SoilMKKVYSYLVVCSLLLLVLSAAAQVQNGQFTGTVTDPTGAAIAGA
Ga0066793_1082597313300009029Prmafrost SoilMKRLQFCLVVLAVLALTCSAFAQVQNGQFSGTVLD
Ga0099828_1015147723300009089Vadose Zone SoilMKKLQFCLVFLFPLLLALSAAGQVQNGTFTGTVTDPSG
Ga0099828_1051524523300009089Vadose Zone SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFTGTVTDPTGAAIANAKV
Ga0099827_1083285923300009090Vadose Zone SoilMKKLQFCLVFLCLLLLALSAAAQVQNGQFTGVVTDPSGAAIANAKVTVN
Ga0066709_10369609813300009137Grasslands SoilMKKLQFCLVFLCLLLLALSAAAQVQNGQFTGVVTDPSGAA
Ga0114129_1262431613300009147Populus RhizosphereMKKLQFCLVFVSVFVLALSAIAQIQNGQFSGTVTDPSGAALAEA
Ga0105237_1211031213300009545Corn RhizosphereMTKLRFCLSFLCVFVLVAGALAQVQNGQFTGTVTDPSGAAI
Ga0126384_1215392113300010046Tropical Forest SoilMKKLQLCLVLISVFLLALGAFAQVQNGQFTGVVTDPSGAAIPNA
Ga0126373_1104398713300010048Tropical Forest SoilMAMKKLLFLLISLVLVAEVATAQVQNGQFNGTVLDPSGAAIPNAKVTL
Ga0134082_1015514513300010303Grasslands SoilMKKLQFCLVAISILLVALGAFAQVQNGQFTGIVTDPS
Ga0134064_1040306613300010325Grasslands SoilMKKLQFCLVAISMLLVALGAFAQVQNGQFTGTVTDPSGAA
Ga0074046_10001675173300010339Bog Forest SoilMKRLQFCLVVFAVLALAFSAFAQVENGQFSGTVTDQTGAAIANAK
Ga0074044_1074868913300010343Bog Forest SoilMKRLQFCLVVFAVLALTFSAFAQVENGQFTGTVLDPTGAA
Ga0126372_1185534923300010360Tropical Forest SoilMKKLQFFLVTFSVILLVLAAAGQVQNGQFSGVVTDPSGAAIADAKVTVTNVG
Ga0126372_1235202613300010360Tropical Forest SoilMRRLQFCLAVFALLALTCSAFAQVQNGQITGTVTDPTGA
Ga0134128_1224269313300010373Terrestrial SoilMNKLRFCLVCFSLLVLVLGAAAQVQNGSFTGTVADPSGAAIANAKVTVTNM
Ga0126381_10026586823300010376Tropical Forest SoilMKKFQSWGMVFCLVVLTVTAVGQIQNGQFAGTVTDPSGAA
Ga0136449_10165264923300010379Peatlands SoilMKRLQFCLVVFAVLALTFSAFAQVENGQFSGTVTDQTGAAIANA
Ga0137391_1085054023300011270Vadose Zone SoilMKRLQFCLAVFAVLALTFGASAQVQNGQFTGTVTDPTGA
Ga0137393_1040575123300011271Vadose Zone SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFDGAVTDPTGAA
Ga0137393_1166171113300011271Vadose Zone SoilMKKLQFCLALLSLLVLAPGAFAQVQNGQFNGTVTDPSG
Ga0137388_1004282813300012189Vadose Zone SoilMKRLQFCLAVFAVLALSVSAFSQMQNGQFSGTVLDPTGAAVANAK
Ga0137364_1048477923300012198Vadose Zone SoilMKKSQCCLVLFSFLLLVLTAAAQVQNGQFTGAVTDQTGAAIPNA
Ga0137365_1057413923300012201Vadose Zone SoilMKKFQCCLVLFSSLLLILSAAAQVQNGQFTGTVTDQ
Ga0137387_1112433813300012349Vadose Zone SoilMKKLQFCLVLSVIVLTVCASAQIQNGQFTGTVTDPSGAAIPN
Ga0137375_1137216013300012360Vadose Zone SoilMKRLQFCLVLFCTLMLALGAFAQVQNGQFTGEVTDPSGAAIANAKV
Ga0137361_1143102513300012362Vadose Zone SoilMKKLQFCLVLFSLFVLVVSAAAQVTNGQFVGTITDPSGAA
Ga0157339_105651723300012505Arabidopsis RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSGAAIANAKVTVVN
Ga0137359_1089337113300012923Vadose Zone SoilMKKLQLCLISLCILTLTLTAAAQVQNGQFTGVVTDPSGAAIANAKVTVTNL
Ga0137416_1129846823300012927Vadose Zone SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFTGTVTDPTGAAIANA
Ga0137407_1058616813300012930Vadose Zone SoilMKKLQFCLVFFSLFVLVLSAAAQVQNGQFAGTITDPSGAAIANAKVT
Ga0137407_1196551813300012930Vadose Zone SoilMRRLQFCLAVFALLALTCSAFAQVQNGQITGTVTDPSGAAIPN
Ga0137410_1177774113300012944Vadose Zone SoilMRRLQFCLAVFSLLALTMSAVAQVQNGQITGTVTDPSGAAIA
Ga0164305_1017179013300012989SoilMKKLQLILLSLSLLALSLGAFAQIQNGQFTGTVTDPSGAA
Ga0134075_1044416113300014154Grasslands SoilMKKLQFCLVAISMLLLALGAVAQVQNGQFTGVVTDPSGAAIPNAK
Ga0137418_1124213113300015241Vadose Zone SoilMKKLQFCLVFFSVLVLVLSAAAQVQNGQFTGTITDPSGAA
Ga0137409_1017609813300015245Vadose Zone SoilMRRLQFCLAVFALLALTMSAVAQVQNGQITGTVTAPSGAAIANA
Ga0137409_1055536913300015245Vadose Zone SoilMRRLQFCLAVFALLALTLSAFAQVQNGQITGTVTDPSGAAIA
Ga0132258_1011111073300015371Arabidopsis RhizosphereMNKLRFCLVCFSLLVLVLGAAAQVQNGSFTGTVADPSGA
Ga0132256_10002133463300015372Arabidopsis RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSG
Ga0132255_10249271013300015374Arabidopsis RhizosphereMNKLRFCLVYFSLLVLVLGAAAQVQNGTFTGTVADPSGAAIANAK
Ga0187848_1009668623300017935PeatlandMKRLQFCLAVFAVLALTCSVFAQVQFSQFTGTVLDPTSAAI
Ga0187853_1027438023300017940PeatlandMRRLQFCLAVFAVLALSFSALAQVQNGQFAGTVTDPSGAAIA
Ga0187819_1074706913300017943Freshwater SedimentMKRLQFCLVVFAVLALTFSAFAQVQNGEFSGTVTDQTGAA
Ga0187817_1112662733300017955Freshwater SedimentMKRLQLCLAVFAVLALSFSAFAQVENGQFAGTVTDP
Ga0187804_1040519823300018006Freshwater SedimentMKRLQFCLAVFAVLALTCSAFAQIQFGQFTGTVLDPTGAAIA
Ga0187810_1036400713300018012Freshwater SedimentMRKLQFCLVVFAVLALTCSLFAQVQNGQFEGTVTDPTGAAIANAK
Ga0187883_1000975013300018037PeatlandMRRLQFCLAVFAVLALSFSASAQIQFGQFTGTVTDPTSAAIANAKIVVTNPATD
Ga0187883_1067835513300018037PeatlandMKRLQFCLVVFAVLALTVSAIAQVQNGQFTGTVTDPTGAVV
Ga0187772_1119255713300018085Tropical PeatlandMKKLQFYLAVFAVIVLSFSAFAQVQNGQFAGTVTDPTGAAIANAKVTVKN
Ga0066662_1028251933300018468Grasslands SoilMKKLQFCLVFLFLLLLALSAAAQVQNGTFTGTVTDPSGA
Ga0193713_120117513300019882SoilMRKLQFCLAVFALLALTMSAFAQVQYGQITGTVTDPSGAAIANAKVT
Ga0193728_117524413300019890SoilMKKLQSCLVIFSFMLLVFSAAAQVQNGQLSGDVTD
Ga0210394_1176887513300021420SoilMKRLQFCLAVFAVLALTFNAFAQVQNAQFTGTVSDPTGAAIANAKVTVSNP
Ga0210384_1053738123300021432SoilMRKLQLCFLLFSLVASSMGSFAQIQNGQFTGIVTDPSGAAIANAK
Ga0187846_1029069813300021476BiofilmMKKLQFCFALLCVLVLALGAFAQVQFGQFSGVVTDPSGAAIPNAKVTVT
Ga0210398_1014160013300021477SoilMRRLQFCLAVFAVLALTFSASAQVQFALLAGTVLDP
Ga0210409_1111397723300021559SoilMKNLRFCLVCLSVLLLALGGFAQIQNGQFTGTVTDPSGAAIA
Ga0210409_1144554413300021559SoilMKKLSFFFLLLSSLLILSLGAFAQVQNGQFAGTVNDP
Ga0208479_110185813300025474Arctic Peat SoilMKRLQFCLVVFAVLALTFSAFAQVQFGQFTGTVTDPTGAAIANAKVAVSNPA
Ga0208688_102173623300025480PeatlandMKRLQFCLAVFAVLALSFSAFAQVQFGQFSGTVLDPTG
Ga0207926_104372413300025619Arctic Peat SoilMKRLQFCLVVFAVLALTFSAFAQVQFGQFTGTVTDPTGAAIANAKV
Ga0207671_1034254123300025914Corn RhizosphereMKKLHLILLSLSLLALSLGAFAQIQNGQFTGTVTDPSGAAISN
Ga0207681_1019750113300025923Switchgrass RhizosphereMKKLHLILLSLSLLALSLGAFAQIQNGQFTGTVTDPSGA
Ga0207677_1015532513300026023Miscanthus RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSGAAIANAKVTVV
Ga0207648_1200843413300026089Miscanthus RhizosphereMKKLQLILLSLSLLALSLGAFAQIQNGQFTGTVTDPSGAAI
Ga0209154_118433023300026317SoilMKRLQFCLAVFAVLFLALSAFAQVQNGQFEGTVTDPTGAAI
Ga0209154_123531113300026317SoilMKKLQFCLVAISMLLVALGAFAQVQNGQFTGTVTDPSGAAIPNA
Ga0209687_129670613300026322SoilMTKLRFCLSFLCVFVLVAGALAQVQNGQFTGTVTDPSGAAIANAKVT
Ga0257180_104281113300026354SoilMKKLQFCLVYFSLLVLVLGAAAQVQNGQFTGTVADPSGAAIANSRVTVTNMG
Ga0257169_102003113300026469SoilMKRLQFCLAVFAVLALTFSAVAQVQNGQFTGTVSDPT
Ga0209058_110488813300026536SoilMKKLQFCLVAISILLVALGAFAQVQNGQFTGIVTDPSGAAIPN
Ga0209156_1045571713300026547SoilMKKLQFCLVAASVLVLALSAFAQIQNGQFTGTITDPSG
Ga0179587_1063884123300026557Vadose Zone SoilMRNLRFCLIFVFVVLLSTLTFAQVQNGQFAGTVTD
Ga0209116_107156713300027590Forest SoilMKKSQFCLVLLCGLVLTLAAGAQIQNGQFEGTVTDQSGAAI
Ga0209528_100159363300027610Forest SoilMFAVLTLTFSAFAQVQNGQFTGTVTDPTGAAIANAKVTVSNPAIDLNLS
Ga0209011_106095523300027678Forest SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFTGTVTDPTGAAIAN
Ga0209248_1012977233300027729Bog Forest SoilMKRLQFCLVVFAALALTFSAFAQVQFGQFTGTVTDPTGAAIPNAKIQ
Ga0209248_1021503613300027729Bog Forest SoilMKRLQFCLVFAVLALTFSAFAQEESGQFSGTVLDPTGAAV
Ga0209180_1028211223300027846Vadose Zone SoilMKKLQFCLVFFSLLIMVVSAAAQVQNGQFTGTITDPSGAAIANAKVTA
Ga0209180_1040545123300027846Vadose Zone SoilMKRLQFCLVLLSLLALSLGAFAQIQNGQFTGTVTDP
Ga0209283_1057224313300027875Vadose Zone SoilMKKLQFCLVALFLLLMTLSVSAQVQNGQFTGVVTDPSGASIPNAKV
Ga0209283_1073575013300027875Vadose Zone SoilMKKLQFCLVFLCLSLLALSAAGQVQNGQFTGVVTDPSGAAI
Ga0209590_1066767413300027882Vadose Zone SoilMKKLQFCLVALFLLLMTLSVSAQVQNGQFTGVVTDP
Ga0209068_1058865723300027894WatershedsMNKLRFCLVYFSLLVLVLGAAAQVQNGTFTGTVADPSGAAIASAKVTVTS
Ga0209698_1003705953300027911WatershedsMRRLQFCLVVFAVLTLSFSVFAQVENGQFTGTVTDP
Ga0209698_1013994723300027911WatershedsMKRLQFCLAVFAVLALSFSAFAQVQNGQFTGTVTDPTGAT
Ga0209526_1030994613300028047Forest SoilMKRLQFCLAMFAVLTLTFSAFAQVQNGQFTGTVTDPTGAAIANAKVTV
Ga0209526_1050167113300028047Forest SoilMKKLQFCLVAFSLLVLAIGSAAQIQNGQFSGTVTDP
Ga0209526_1063663523300028047Forest SoilMRKLQLCLLSLSLLALSLEAVAQIQNGAFTGTVTDPSGAAVANA
Ga0209526_1068098213300028047Forest SoilMKNSRFCLMLLSLLALSLAAFAQIQNGQFTGTVTDPSG
Ga0268265_1036184313300028380Switchgrass RhizosphereMKKLHLILLSLSLLALSLGAFAQIQNGQFTGTVTDPSGAAIS
Ga0268265_1132118913300028380Switchgrass RhizosphereMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSGAAI
Ga0302144_1025225713300028560BogMKRLQFCLVVFAVLALTVSAIAQVQNGQFTGTVTDPTGAAIANAKVT
Ga0257175_106321513300028673SoilMRRLQFCLAVFALLALTCSVFAQVQNGQITGTVTDP
Ga0302165_1001167313300028678FenMKRLQFCLAVFALLALTCSAFAQIQNGQFTGTVTDPTGAA
Ga0302163_1013487813300028868FenMRRLQFCLVVFTVLALSLSAFAQVQNGQFTGTITDPSGAAIA
Ga0222749_1017357813300029636SoilMKNLRFCLVCLSVLLLALGGFAQIQNGQFTGTVTDPSGAAI
Ga0311329_1007744413300029907BogMKRLQFCLVVFAVLALTLSAFAQVQNGQFTGTVTDPTGAAIANA
Ga0311326_1001819453300029917BogMKRLQFCLVVFAVLALTLSAFAQVQNGQFTGTVTDPTGAAIAN
Ga0311370_1109764823300030503PalsaMKRLQFCLAVFAVLALASSAFAQVQFSQFTGTVTDQTGAAIASAKVTAKNPATDLSL
Ga0311372_1268803913300030520PalsaMKRLQFCLAVFAVLALSVSAFAQVQFGQFTGTVTDQTGAAIANAK
Ga0310038_1018323723300030707Peatlands SoilMKRLQFCLAVFAVLALSFSVFAQVQNSQFTGTVTDPTGAAIANAKIIVT
Ga0073994_1237063713300030991SoilMKRLQFCLAVFAVLALTVSAFSQVQNGQFAGTVTDPTGAAVPN
Ga0073994_1239439213300030991SoilMKRLQFCLAVFAVLALTFSAFAQVQNGQFTGTVSDPTGA
Ga0265316_1034260013300031344RhizosphereMRRLQFCLALFAVLALSLSAFAQVQNGQFAGTVTDPTGAAIANA
Ga0307468_10188455123300031740Hardwood Forest SoilMKRLQFCLVLLCTLMLALGAFAQVQNGQFTGEITDPSGAAIANAKVT
Ga0307468_10237244313300031740Hardwood Forest SoilMKRLQFCLVLLSLVALSLSASAQLTNGQFTGTVTDP
Ga0307478_1111320023300031823Hardwood Forest SoilMKKLQFCLVLFSVLLLALGAIAQIQNGQFDGTVTDPSGAAIP
Ga0311301_1154044213300032160Peatlands SoilMKRLQFCLVVFAVLALTFSAFAQVENGQFSGTVTDQTGAAIANAK
Ga0311301_1158312713300032160Peatlands SoilMKRLQFCLVVFAVLALTFSAFAQVQFSQFAGTVLDPTGASIANAKVTVTNPATALRLSAT
Ga0335070_1119135333300032829SoilMRRLQFCLAVFAVLALSFSAFAQVQNGQFTGTVTDPS
Ga0335076_1174176113300032955SoilMKKLRFCLSLCFVFALALGALAQIQNGQFTGTVTDPSGAAIPNAQITVTN
Ga0326726_1222131913300033433Peat SoilMRRLQFCLAAILVVVALGLCASAQVQNGQFTGNVTDPS
Ga0316624_1134192913300033486SoilMKRLQFCLVVFAVLALTFSAFAQVQNGQFSGTVLDPTGAAVAGAKITVTSP
Ga0370483_0056647_2_1213300034124Untreated Peat SoilMKRLQFCLVVFAVLALTVSAIAQVQNGQFAGTVTDPTGAA


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