Metagenome / Metatranscriptome Family F055566

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055566
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	42 residues
Representative Sequence	VEGSVDEMAELREHAAAQAALFNIGVEETETAEESTPGGRIGE
Number of Associated Samples	85
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.03 %
% of genes near scaffold ends (potentially truncated)	26.81 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.449 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.638 % of family members)
Environment Ontology (ENVO)	Unclassified (31.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.362 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.62% β-sheet: 0.00% Coil/Unstructured: 63.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01165	Ribosomal_S21	47.83
PF00076	RRM_1	14.49
PF00271	Helicase_C	10.87
PF00313	CSD	2.90
PF13451	zf-trcl	0.72
PF17132	Glyco_hydro_106	0.72
PF13557	Phenol_MetA_deg	0.72
PF04545	Sigma70_r4	0.72
PF13193	AMP-binding_C	0.72
PF01740	STAS	0.72
PF08450	SGL	0.72
PF07676	PD40	0.72
PF01799	Fer2_2	0.72
PF05598	DUF772	0.72
PF13649	Methyltransf_25	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	47.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.72
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.90 %
Unclassified	root	N/A	47.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.45 %
Unclassified	root	N/A	47.10 %
Viruses	superkingdom	All Organisms → Viruses	1.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.45 %
Unclassified	root	N/A	47.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.10 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.45 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100667528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300005537\|Ga0070730_10448058	Not Available	832	Open in IMG/M
3300005538\|Ga0070731_10556433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	764	Open in IMG/M
3300005541\|Ga0070733_10355291	Not Available	972	Open in IMG/M
3300005764\|Ga0066903_100069560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4489	Open in IMG/M
3300005764\|Ga0066903_109113792	Not Available	502	Open in IMG/M
3300006797\|Ga0066659_11709021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	531	Open in IMG/M
3300009826\|Ga0123355_10670796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1202	Open in IMG/M
3300009826\|Ga0123355_11121699	Not Available	815	Open in IMG/M
3300010043\|Ga0126380_10902462	Not Available	734	Open in IMG/M
3300010046\|Ga0126384_10462118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300010046\|Ga0126384_11665988	Not Available	602	Open in IMG/M
3300010048\|Ga0126373_10110565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	2556	Open in IMG/M
3300010048\|Ga0126373_10211353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1887	Open in IMG/M
3300010048\|Ga0126373_10451264	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300010048\|Ga0126373_10853248	Not Available	974	Open in IMG/M
3300010048\|Ga0126373_11536644	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300010048\|Ga0126373_11798549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	676	Open in IMG/M
3300010359\|Ga0126376_10430202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1199	Open in IMG/M
3300010359\|Ga0126376_10563372	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300010361\|Ga0126378_12762946	Not Available	561	Open in IMG/M
3300010361\|Ga0126378_12966313	Not Available	541	Open in IMG/M
3300010361\|Ga0126378_13263285	Not Available	516	Open in IMG/M
3300010366\|Ga0126379_10459259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300010366\|Ga0126379_10826371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300010366\|Ga0126379_11065348	Not Available	914	Open in IMG/M
3300010366\|Ga0126379_11709142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	734	Open in IMG/M
3300010366\|Ga0126379_11807879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	715	Open in IMG/M
3300010366\|Ga0126379_12249704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	646	Open in IMG/M
3300010376\|Ga0126381_100680088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1470	Open in IMG/M
3300010376\|Ga0126381_102871362	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010376\|Ga0126381_104033617	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300010376\|Ga0126381_104055265	Not Available	569	Open in IMG/M
3300010398\|Ga0126383_10221158	Not Available	1835	Open in IMG/M
3300010398\|Ga0126383_13262460	Not Available	530	Open in IMG/M
3300011120\|Ga0150983_10675235	All Organisms → cellular organisms → Bacteria → Acidobacteria	3757	Open in IMG/M
3300016294\|Ga0182041_12158172	Not Available	520	Open in IMG/M
3300016341\|Ga0182035_11330720	Not Available	644	Open in IMG/M
3300016357\|Ga0182032_10131259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1824	Open in IMG/M
3300016371\|Ga0182034_11246326	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300016387\|Ga0182040_10456872	Not Available	1013	Open in IMG/M
3300016404\|Ga0182037_11335118	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300016422\|Ga0182039_10590249	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300016422\|Ga0182039_11403781	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300016445\|Ga0182038_11059572	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300017924\|Ga0187820_1073198	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300017959\|Ga0187779_10000902	All Organisms → cellular organisms → Bacteria	19209	Open in IMG/M
3300017959\|Ga0187779_10094058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1799	Open in IMG/M
3300017959\|Ga0187779_10883751	Not Available	614	Open in IMG/M
3300017961\|Ga0187778_10025384	All Organisms → cellular organisms → Bacteria → Acidobacteria	3620	Open in IMG/M
3300017961\|Ga0187778_10326525	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300017970\|Ga0187783_10010964	All Organisms → cellular organisms → Bacteria → Acidobacteria	6663	Open in IMG/M
3300017970\|Ga0187783_10013822	All Organisms → cellular organisms → Bacteria → Acidobacteria	5954	Open in IMG/M
3300017970\|Ga0187783_10048581	All Organisms → cellular organisms → Bacteria → Acidobacteria	3132	Open in IMG/M
3300017970\|Ga0187783_10198862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1472	Open in IMG/M
3300017972\|Ga0187781_10676299	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300017972\|Ga0187781_11131881	Not Available	575	Open in IMG/M
3300017974\|Ga0187777_10228419	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300017975\|Ga0187782_10261076	All Organisms → cellular organisms → Bacteria → Acidobacteria	1303	Open in IMG/M
3300017975\|Ga0187782_10282874	All Organisms → Viruses → Predicted Viral	1250	Open in IMG/M
3300017975\|Ga0187782_11318317	Not Available	566	Open in IMG/M
3300018062\|Ga0187784_10001055	All Organisms → cellular organisms → Bacteria	21451	Open in IMG/M
3300018062\|Ga0187784_10324476	Not Available	1249	Open in IMG/M
3300018062\|Ga0187784_10486400	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300018062\|Ga0187784_11550553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	525	Open in IMG/M
3300018064\|Ga0187773_11079333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	532	Open in IMG/M
3300018085\|Ga0187772_11090958	Not Available	585	Open in IMG/M
3300018086\|Ga0187769_10136047	All Organisms → cellular organisms → Bacteria → Acidobacteria	1791	Open in IMG/M
3300018086\|Ga0187769_10279176	Not Available	1246	Open in IMG/M
3300018086\|Ga0187769_10581442	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300018088\|Ga0187771_10474154	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300018088\|Ga0187771_10763076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	820	Open in IMG/M
3300018090\|Ga0187770_10053043	All Organisms → cellular organisms → Bacteria	2925	Open in IMG/M
3300018090\|Ga0187770_10354726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300018090\|Ga0187770_11228272	Not Available	606	Open in IMG/M
3300018482\|Ga0066669_10396757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1166	Open in IMG/M
3300019275\|Ga0187798_1102296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2014	Open in IMG/M
3300020582\|Ga0210395_10864660	Not Available	673	Open in IMG/M
3300021178\|Ga0210408_11002631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	646	Open in IMG/M
3300021361\|Ga0213872_10043608	All Organisms → cellular organisms → Bacteria → Acidobacteria	2043	Open in IMG/M
3300021560\|Ga0126371_10114832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2706	Open in IMG/M
3300022522\|Ga0242659_1015048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1131	Open in IMG/M
3300022527\|Ga0242664_1043600	Not Available	798	Open in IMG/M
3300026322\|Ga0209687_1244513	Not Available	556	Open in IMG/M
3300026325\|Ga0209152_10007829	All Organisms → cellular organisms → Bacteria → Acidobacteria	3788	Open in IMG/M
3300027045\|Ga0207726_1010122	Not Available	1616	Open in IMG/M
3300027376\|Ga0209004_1094456	Not Available	507	Open in IMG/M
3300027826\|Ga0209060_10000722	All Organisms → cellular organisms → Bacteria	49449	Open in IMG/M
3300027842\|Ga0209580_10145195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1166	Open in IMG/M
3300030760\|Ga0265762_1002753	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300031344\|Ga0265316_10575015	Not Available	800	Open in IMG/M
3300031546\|Ga0318538_10450470	Not Available	697	Open in IMG/M
3300031681\|Ga0318572_10215163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1125	Open in IMG/M
3300031715\|Ga0307476_10016212	All Organisms → cellular organisms → Bacteria → Acidobacteria	4757	Open in IMG/M
3300031720\|Ga0307469_12493151	Not Available	505	Open in IMG/M
3300031781\|Ga0318547_10598572	Not Available	684	Open in IMG/M
3300031833\|Ga0310917_10652134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	714	Open in IMG/M
3300031942\|Ga0310916_11137035	Not Available	648	Open in IMG/M
3300031945\|Ga0310913_11210515	Not Available	525	Open in IMG/M
3300031962\|Ga0307479_11707222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	583	Open in IMG/M
3300032008\|Ga0318562_10277520	Not Available	974	Open in IMG/M
3300032055\|Ga0318575_10331521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	771	Open in IMG/M
3300032076\|Ga0306924_10726731	Not Available	1113	Open in IMG/M
3300032076\|Ga0306924_10800306	Not Available	1051	Open in IMG/M
3300032180\|Ga0307471_100980894	Not Available	1012	Open in IMG/M
3300032261\|Ga0306920_100144441	All Organisms → cellular organisms → Bacteria → Acidobacteria	3543	Open in IMG/M
3300032261\|Ga0306920_100382450	All Organisms → cellular organisms → Bacteria → Acidobacteria	2093	Open in IMG/M
3300032783\|Ga0335079_11533539	Not Available	657	Open in IMG/M
3300032828\|Ga0335080_10634067	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300033158\|Ga0335077_10100470	All Organisms → cellular organisms → Bacteria → Acidobacteria	3393	Open in IMG/M
3300033289\|Ga0310914_11523239	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300033977\|Ga0314861_0001895	All Organisms → cellular organisms → Bacteria	24568	Open in IMG/M
3300033977\|Ga0314861_0191604	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.20%
Aquatic	Environmental → Aquatic	2.17%
Plants	Host-Associated → Plants	2.17%
Arthropoda	Host-Associated → Arthropoda	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.20%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.26%
Loam	Environmental → Terrestrial → Soil → Loam	5.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.45%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	28.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.45%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.17%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1006675282	3300005332	Tropical Forest Soil	VEGSVDEMAELREHAAAQAALFNIGVEETETADEARPRAASASDG*
Ga0070730_104480582	3300005537	Surface Soil	VDEMAELREHAAAQAALFNIGAEETDTAEESAPDARVGE*
Ga0070731_105564331	3300005538	Surface Soil	SDSVDEMAELREHAAAQAALFKIGAEETDTPEESAPDARVGE*
Ga0070731_106431853	3300005538	Surface Soil	QEKPAEGGADEMAELREHAAAQAALFNLDTEDVGTADESTGDRAGE*
Ga0070733_103552913	3300005541	Surface Soil	KQEKPAEASADEIAELREHAAAQAALFNIGVEDSETAEESTHDGRLGE*
Ga0066903_1000695603	3300005764	Tropical Forest Soil	VDGSADEMAELREHAAAQAALFNIGVEKTEAPEESTPSDHSSE*
Ga0066903_1079493371	3300005764	Tropical Forest Soil	MGGSEDEMAELRKHAAAQAALFNFGVEETETVRQSTSDERTDQ*
Ga0066903_1091137921	3300005764	Tropical Forest Soil	TEGSVDEMAEPNEHAAAQAAPFNIGVEKTETAMESTPMAPSASDS*
Ga0075019_107669691	3300006086	Watersheds	VDEMAELREHAAAQAALFNLGVEDSEPAEEPTPSGGNAH*
Ga0066659_117090213	3300006797	Soil	KQEKPVESGVDEMAELREHAAAQAALFNIGVEETETAEESTSDRK*
Ga0123355_106707962	3300009826	Termite Gut	MAELRENAAAQAELFNIGAEETKTAEESTSEGHIGQ*
Ga0123355_111216991	3300009826	Termite Gut	VEGSVDEMAELRENAAAQAALFNIGVEETGTAEESTPDDRISE*
Ga0126380_109024622	3300010043	Tropical Forest Soil	MAALRENAAAQAALFSITVKEAETAEESAPSGGRIGN*
Ga0126384_104621181	3300010046	Tropical Forest Soil	MAELREHAAAQAALFNIGVKETKIADESTPNGRIGE*
Ga0126384_116659882	3300010046	Tropical Forest Soil	VERSVDEMAELREHAAEQAALFNIGVEETETADESTPDDRIAE*
Ga0126373_101105653	3300010048	Tropical Forest Soil	VEGSVDEMAELRQHAAAQAALFNVGVEETHAADESTPDGRIGE*
Ga0126373_102113531	3300010048	Tropical Forest Soil	MAELHEHAAAQADLFNIGVEKTETAKVSAPDGHIGE*
Ga0126373_104512642	3300010048	Tropical Forest Soil	VEGSTDEMAELREHAAAQAALFNIGVEKTESADESRPDDHIVE*
Ga0126373_107853792	3300010048	Tropical Forest Soil	VEGSVDEMAELREHAAAQAAPFNIGVKETKIADEFMPK*
Ga0126373_108532482	3300010048	Tropical Forest Soil	VEGSADEMAELHEHARAQAALFNLGGETEAAEESTAGDRIGE*
Ga0126373_108662413	3300010048	Tropical Forest Soil	MEGSVDEMAELREHAAAQAALFNFGVEETETTQESTPDERTDE*
Ga0126373_115366442	3300010048	Tropical Forest Soil	VEGSVDEMAELREHAAAQSALFNIGVEKTETADESTPDGRIGE*
Ga0126373_117985492	3300010048	Tropical Forest Soil	VEGSVDEMAELREHAAAQAALFNIGPEESETADYSTPHGRMGE*
Ga0126376_104302021	3300010359	Tropical Forest Soil	NQRKQEKPVEGSVDEMAELREHAAAQAALFNMGIEETETADEHTPDGRIGE*
Ga0126376_105633722	3300010359	Tropical Forest Soil	MAELREHAAAQAALFNIGAEEDETAEDSTSSERVGE*
Ga0126372_111462312	3300010360	Tropical Forest Soil	VEGSVDEMAELREHAAAQAALFNIEVEETEMAEELPGDL*
Ga0126378_127629461	3300010361	Tropical Forest Soil	VEGSVDEMAELREHAAAQGALFNIGIEETESVDESTPDGRIGE*
Ga0126378_129663131	3300010361	Tropical Forest Soil	VEGSVDEMAELREHAAAQAALFNIGTEETGSADESTPDGRTGE*
Ga0126378_132632852	3300010361	Tropical Forest Soil	VEGTVDEMAKLREHAAEQAALFNIGMEETETAEESTPGGRIGE*
Ga0126379_103328903	3300010366	Tropical Forest Soil	VEGSVDEMAELREHAAAQAAPFNIGVKETKIADKFMPK*
Ga0126379_104592592	3300010366	Tropical Forest Soil	MAALRENAAAQAALFSITVKEAETAEESAPSGRSATDS*
Ga0126379_108263711	3300010366	Tropical Forest Soil	MAELREHAAAQGALFNIGMEETESVDESTSDGRIGE*
Ga0126379_110653482	3300010366	Tropical Forest Soil	VEGSVDEMVKLREHAAAQAALFNIGAEETESADESTPEGRIGE*
Ga0126379_117091421	3300010366	Tropical Forest Soil	KQEKPVEGSVDEMAELREHAAAQAALFNIGPEESETADDSTPHGRMGE*
Ga0126379_118078792	3300010366	Tropical Forest Soil	MAELREHAAAQAALFNIGVEETEAAKESTPGSRVSE*
Ga0126379_122497042	3300010366	Tropical Forest Soil	VEGSVDEMAELREHAAEQAALFNIGVEETETAEESTRSGRIGE*
Ga0126381_1006800883	3300010376	Tropical Forest Soil	VEVGVDEMAELREHAAAQAALFNVFVEETESADESTHGGRIDE*
Ga0126381_1028713622	3300010376	Tropical Forest Soil	VEGNVDEMAEPHEHAAAQAALFNIGVEETESADESTPDGRIGE*
Ga0126381_1040336171	3300010376	Tropical Forest Soil	VEGSVDEMAELREHAAAQAALFNIGVKETKIADESTPNGRIGE*
Ga0126381_1040552652	3300010376	Tropical Forest Soil	VEGNVDEMAELREHAAAQAALFNVGVEETESADKSTHDGRIDD*
Ga0126383_102211581	3300010398	Tropical Forest Soil	KPVDGSADEMAELREHAAAQAALFNIGVEKTEAPEESTPSDHSSE*
Ga0126383_132624601	3300010398	Tropical Forest Soil	RQDKPVGGSVGDMSELHEHAAAQAGLFNIGVEETETANESTPDDRIGE*
Ga0150983_106752354	3300011120	Forest Soil	VEGGADEMAELREHAAAQAALFNIGVEENETAEETTPDERMSQ*
Ga0150985_1176004011	3300012212	Avena Fatua Rhizosphere	ADSNVDEMAELREHAAAQAALFNVGFEDSEESSADDSE*
Ga0134110_103708932	3300012975	Grasslands Soil	VDEMAELREHAAAQAALFNVGVEDSDESSADDSE*
Ga0182036_109889301	3300016270	Soil	GGSVDEMAELREHAAAQAALFNLGAEEADTAEEASPSGRISE
Ga0182041_121581721	3300016294	Soil	VEGTVDEMAALREHAAAQAALFNISVEEAETAEESTPGGRI
Ga0182033_116050881	3300016319	Soil	QRRQEKPAESSIDEMAELREHSAAQAALLNLGAEDAVTKEKSTGGDQIGE
Ga0182035_113307202	3300016341	Soil	VDETAELNEHAAAQAAPFNIGVEKTETAMESTPDGRIGD
Ga0182032_101312594	3300016357	Soil	VEGSVDEMAELREHAAAQAALFNLGVEETEAGDESTPDGRIGD
Ga0182034_112463263	3300016371	Soil	VEGSVDEMAELREHAAAQAALFNIEVEKTETAEESTPDGRIGE
Ga0182040_104568723	3300016387	Soil	MAELREHAAAQAALFNIGMEETEMAEESPGGRIGE
Ga0182037_113351181	3300016404	Soil	NQRRQDKPVEGSVDEMAELREHAAAQAALFNIEVEKTETAEESTPDGRIGE
Ga0182039_105902492	3300016422	Soil	VEGSVDEMAELREHAAAQAALFNIGPEETEAADDSTPHGRMSE
Ga0182039_114037813	3300016422	Soil	EGSVDEMAELREHAAAQAALFNIEVEKTETAEESTPDGRIGE
Ga0182038_110595722	3300016445	Soil	QEKPVEGSVDEMAELREHAAAQAALFNIGPEETEAADDSTPHGRMSE
Ga0187820_10731982	3300017924	Freshwater Sediment	VEGSVDEMAELREHAAAQAALFNIGVDETETVEESRRDD
Ga0187809_101884092	3300017937	Freshwater Sediment	RKNLRKQDQPASDSVDEMAALREHAAAQAALFNIGAEESDTAEESGPDVRVGE
Ga0187779_1000090227	3300017959	Tropical Peatland	VEGSVDEMAELRECAAAQAALFNIGVEETEAADESTPDSRIGE
Ga0187779_100940583	3300017959	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETETAEESTSGGRIGD
Ga0187779_108837512	3300017959	Tropical Peatland	MAELREHAAAQAALFNIGPEESETADDSTPHGRMGE
Ga0187778_100253842	3300017961	Tropical Peatland	VEGSVDEMAELHEHAAAQAALFNIGVEETEADESTPDGRIGE
Ga0187778_103265252	3300017961	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNFGVEETEAADESTLYGRIGE
Ga0187783_100109644	3300017970	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETEADDSTLDDRIGE
Ga0187783_100138229	3300017970	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGGKQTETAEESMPAGRIDE
Ga0187783_100485812	3300017970	Tropical Peatland	VAGSVDEMAELREHAAAQAALFNIGVEETETADDSTPDGRIGE
Ga0187783_101988623	3300017970	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETETADDSTPNGRIGE
Ga0187781_103248612	3300017972	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNVGVEETESADESIR
Ga0187781_106762992	3300017972	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETEPTDESTPDGRIGE
Ga0187781_111318811	3300017972	Tropical Peatland	SVDEMAELHEHAAAQAALFNIDVEKTETADESTPGGRIGE
Ga0187777_102284193	3300017974	Tropical Peatland	RRQEKPVEGSVDEMAELREHAAAQAALFNIGVEETETAEESTSGGRIGD
Ga0187782_102610763	3300017975	Tropical Peatland	VEGTVDEMAELREHAAAQAALFNIGVEETETADESTPDGRIGE
Ga0187782_102828743	3300017975	Tropical Peatland	VAGSADEMAELREHAAAQAALFNIGAEEAEADESTPDGRIGE
Ga0187782_113183172	3300017975	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETETADDSKPDGRIGE
Ga0187784_1000105525	3300018062	Tropical Peatland	VDGSVDEMAELREHAAAQAALFNIGVEETETAEESTPSDRIGE
Ga0187784_103244761	3300018062	Tropical Peatland	RNQRRHEKPVESSVDEMAELREHAAAQAALFNIGREETKTAQESDPDDRRGK
Ga0187784_104864002	3300018062	Tropical Peatland	MAELRQHAAAQAALFNIGVEETETAEESTPHGRFGE
Ga0187784_115505532	3300018062	Tropical Peatland	VDEMAELRQHAAAQAALFNIGVEETETPDESTPDGRFGE
Ga0187773_110793332	3300018064	Tropical Peatland	VVGSADEMAELLEHAAAQAALFNIGVEETETAEEPTPGGKSAGA
Ga0187772_110909581	3300018085	Tropical Peatland	DEMAELREHAAAQAALFNIGVEETESADESTPDGRIGE
Ga0187769_101360472	3300018086	Tropical Peatland	VECSGDEMAELRAHAAAQAALFNIGVEETETANESMPDGRAGE
Ga0187769_102791761	3300018086	Tropical Peatland	VDEMAELREHAAAQAALFNIGVEETETAEESTPSDRIGE
Ga0187769_105814421	3300018086	Tropical Peatland	RQEKPVQGSVDEMAELREHAAAQAALFNIGLEETENADESTPDGRIGE
Ga0187771_104741542	3300018088	Tropical Peatland	VQGSVDEMAELREHAAAQAALFNIGVEETEPAEESTPGGRIGE
Ga0187771_107630762	3300018088	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNVGVEETEAAEESTPDGRFGE
Ga0187770_100530434	3300018090	Tropical Peatland	VEGTVDEMAELREHAAAQAALFNIGVEETETPDESTPDGRFGE
Ga0187770_103547262	3300018090	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETEAADESTPDGRIGE
Ga0187770_112282722	3300018090	Tropical Peatland	VEGSVDEMAELREHAAAQAALFNIGVEETESADESSPDSRIGE
Ga0066662_106290961	3300018468	Grasslands Soil	VDSNIDEMAELREHAAAQAALFNVGVEDSDESSADDSE
Ga0066669_103967573	3300018482	Grasslands Soil	PVESGVDEMAELREHAAAQAALFNIGVEETETAEESTSDRK
Ga0187798_11022963	3300019275	Peatland	GSVDEMAELREHAAAQAALFNIGVEETEPVEESTPGGRIGE
Ga0210395_108646601	3300020582	Soil	VVGSVDETAALREHAAAQAALFNFTAGDAETAAESTPGGCLATDS
Ga0210408_110026313	3300021178	Soil	MAELREHAAAQAALFNIGVEDTEAAEESTADGRGE
Ga0213872_100436082	3300021361	Rhizosphere	VEGSVDEMAELREHAAAQAALFNIGVEETGTAEESTPDGRIRE
Ga0210386_104359641	3300021406	Soil	LDEMAELREHAAAQAALFNLGVEDPGPADDPMPRTGNRTQS
Ga0126371_101148321	3300021560	Tropical Forest Soil	RKQERPVEGSVDEMAELREHAAAQAALFNIGPEESETADYSTPHGRMGE
Ga0126371_105613382	3300021560	Tropical Forest Soil	VEGSVDEMAELREHAAAQAAPFNIGVKETKIADEFMPK
Ga0126371_114523161	3300021560	Tropical Forest Soil	QEKPVGGSVDEMAELRKHAAAQAALFNFGVEETETVRQSTSDERTDQ
Ga0126371_121200392	3300021560	Tropical Forest Soil	QRKQEKPVGGSVDEMAELRKHAAAQAALFNLGGEETETAQESNRDERTDE
Ga0242659_10150481	3300022522	Soil	VEGGADEMAELREHAAAQAALFNIGVEENETAEETTPDERMSQ
Ga0242664_10436003	3300022527	Soil	VEGGADEMAELREHAAAQAALFNIGVEETETAEESTPDERMSQ
Ga0209687_12445131	3300026322	Soil	RKQEKPVESNEDEMAELREHAAAQAALFNHGVDDAGSSDDSTPDGGVGR
Ga0209152_100078294	3300026325	Soil	KQEKPVESGVDEMAELREHAAAQAALFNIGVEETETAEESTSDRK
Ga0207726_10101222	3300027045	Tropical Forest Soil	VDETAELREHAAAQAALFNVGVEETETAEESTPDGRIGE
Ga0209004_10944561	3300027376	Forest Soil	GGVDEMAELREHAAAQAALFNIGVEDNEAAEESTADGSVGE
Ga0209060_1000072226	3300027826	Surface Soil	MRKQDKPAPGSVDEMAELREHAAAQAALFNIGAEETDTEESGPDGRIGE
Ga0209580_101451951	3300027842	Surface Soil	VESGVDEMAELREHAAAQAALFNIGVEDTEGAEDSTADGRGE
Ga0265762_10027531	3300030760	Soil	AEGSVDEMAELREHAAAQAALFNIGADDTETAEESTPHGRGE
Ga0265316_105750153	3300031344	Rhizosphere	VEGSVDEMAELREHAAAQKALFNIGVEETDTVEESLPHGRLGD
Ga0318538_104504701	3300031546	Soil	VDEIAELHEHAAAQADLFNIGAEKTETVKESTPDGRIGARDS
Ga0310915_100789683	3300031573	Soil	VDEMAELREHAAAHAALFNLGAEEADTAEEASPSGRISE
Ga0318572_102151631	3300031681	Soil	VDEIAELHEHAAAQADLFNIGVEKTETAKESAPDSHIGE
Ga0307476_100162123	3300031715	Hardwood Forest Soil	VEGGADEMAELREHAAAQAALFNIGVEETETAEETTPDERMSQ
Ga0307469_124931512	3300031720	Hardwood Forest Soil	VEGSVDEMAELREHAAAQAALFNIGVEDSETVEESTPDGRIGE
Ga0318546_106435933	3300031771	Soil	VDEMAELREHAAAQAALFNLGAEEADTADEDSPSGRISE
Ga0318547_105985723	3300031781	Soil	QERPVEGSVDEMAELREHAAAQAALFNIGMEETEMAEESPGGRIGE
Ga0310917_104937512	3300031833	Soil	QQKALGGSVDEMAELREHAAAHAALFNLGAEEADTAEEASPSGRISE
Ga0310917_106521342	3300031833	Soil	KPVEGSVDETAELREHAAEQAALFNIGVEETETAEESTGSGRIGE
Ga0310916_111370352	3300031942	Soil	VEGSVDEMAELREHAAAQAALFNIGVEETETPEESTPGGRIDE
Ga0310913_112105152	3300031945	Soil	NPVESSVDEMAELREHAAAQAALFNIGVEETETPEESTPGGRIDE
Ga0307479_117072222	3300031962	Hardwood Forest Soil	EMAELREHAAAQAALFNIGVEDTEAAEESTADGRGE
Ga0318562_102775201	3300032008	Soil	VDEIAELHEHAAAQVDLFNIGAEKTETVKESTPDGRIGARDS
Ga0318575_103315211	3300032055	Soil	MAELHEHAATQAELFNIGVEKTETAKESTPDGCIGE
Ga0306924_107267311	3300032076	Soil	VEEIAELHEHAAAQADLFNIGAEKTETVKESTPDGRIGARDS
Ga0306924_108003062	3300032076	Soil	GSVDEIAELHEHAAAQADLFNIGAEKTETVKESTPDGRIGARDS
Ga0307471_1009808942	3300032180	Hardwood Forest Soil	VEGSVDEMAELREHAAAQAALFNIGVEDTETVDESTPDGRIGE
Ga0306920_1001444419	3300032261	Soil	VEGSVDEMAELREHAAEQAALFNIGVEETETAEESTGSGRIGE
Ga0306920_1003824502	3300032261	Soil	VEGSVDEMAELREHAAAQAALFNIGVEETESTEESTPGGHIGE
Ga0335085_115363922	3300032770	Soil	EPVPGSVDEMAELRRHAAEQAALFNVGATEVDTSEEFTSGDQSSD
Ga0335079_115335392	3300032783	Soil	VDEMAELREHAAAQAALFNIGAEETDTPVESAPDGRVGK
Ga0335080_106340672	3300032828	Soil	MAALREHAAAQAALFNIGAEESDTAEESGPDGRVGE
Ga0335084_116779372	3300033004	Soil	QPAPGSADELAELREYAAAQAALFNVGAEEADTAEEAAPGGRVGQ
Ga0335077_101004702	3300033158	Soil	VEGSVDEMAELREHAAAQAALFNIGVEETETAEESTPGGRIGE
Ga0335077_118396421	3300033158	Soil	QDQPAPGSADELAELREHAAAQAALFNVGAEEVDTAEEAAPDGRFGQ
Ga0310914_107801971	3300033289	Soil	VDEMAELREHAAAQAALFNLGAEEADTADEDSPSG
Ga0310914_115232392	3300033289	Soil	VEGSVDEMAELREHAAEQAALFNIGVEETETAEES
Ga0314861_0001895_6664_6795	3300033977	Peatland	VEGSVDDMAELREHAAAQAALFNFGVEETEAADESTPYGRIGE
Ga0314861_0191604_441_572	3300033977	Peatland	VEGSVDEMAELSEHAAAQAALFNIGVEETEAADESTPDGRIRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences