Metagenome / Metatranscriptome Family F055560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055560
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	47 residues
Representative Sequence	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Number of Associated Samples	93
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	8.70 %
% of genes near scaffold ends (potentially truncated)	26.09 %
% of genes from short scaffolds (< 2000 bps)	47.10 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (34.058 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (82.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.95% β-sheet: 0.00% Coil/Unstructured: 48.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00145	DNA_methylase	5.88
PF13155	Toprim_2	2.21
PF17212	Tube	0.74
PF13385	Laminin_G_3	0.74
PF00476	DNA_pol_A	0.74
PF03629	SASA	0.74
PF12236	Head-tail_con	0.74
PF14700	RPOL_N	0.74
PF00940	RNA_pol	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	5.88
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.74
COG5108	Mitochondrial DNA-directed RNA polymerase	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	64.49 %
Unclassified	root	N/A	27.54 %
cellular organisms	root	All Organisms → cellular organisms	7.97 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	27.54 %
Unclassified	root	N/A	27.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.97 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.62 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.62 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	3.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.62 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	3.62 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	3.62 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.90 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	3.62 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	3.62 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.90 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	3.62 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	3.62 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.90 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	34.06 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	27.54 %
Unclassified	root	N/A	27.54 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	3.62 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	3.62 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.90 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10008513	All Organisms → Viruses → environmental samples → uncultured marine virus	6832	Open in IMG/M
3300000101\|DelMOSum2010_c10013560	Not Available	5083	Open in IMG/M
3300000101\|DelMOSum2010_c10027698	All Organisms → Viruses → Predicted Viral	3167	Open in IMG/M
3300000101\|DelMOSum2010_c10207762	All Organisms → Viruses → environmental samples → uncultured marine virus	651	Open in IMG/M
3300000116\|DelMOSpr2010_c10214954	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	607	Open in IMG/M
3300000117\|DelMOWin2010_c10027064	Not Available	2863	Open in IMG/M
3300000117\|DelMOWin2010_c10031284	All Organisms → Viruses → environmental samples → uncultured marine virus	2589	Open in IMG/M
3300000117\|DelMOWin2010_c10111242	Not Available	978	Open in IMG/M
3300001347\|JGI20156J14371_10002167	Not Available	15721	Open in IMG/M
3300001348\|JGI20154J14316_10057222	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1578	Open in IMG/M
3300001349\|JGI20160J14292_10108684	Not Available	964	Open in IMG/M
3300001352\|JGI20157J14317_10030315	All Organisms → Viruses → Predicted Viral	2849	Open in IMG/M
3300001352\|JGI20157J14317_10030315	All Organisms → Viruses → Predicted Viral	2849	Open in IMG/M
3300001353\|JGI20159J14440_10034145	All Organisms → Viruses → Predicted Viral	2131	Open in IMG/M
3300001353\|JGI20159J14440_10039182	All Organisms → Viruses → Predicted Viral	1926	Open in IMG/M
3300001354\|JGI20155J14468_10040636	All Organisms → Viruses → Predicted Viral	2086	Open in IMG/M
3300004448\|Ga0065861_1011256	All Organisms → Viruses → Predicted Viral	2135	Open in IMG/M
3300004448\|Ga0065861_1017119	All Organisms → Viruses → environmental samples → uncultured marine virus	3505	Open in IMG/M
3300005606\|Ga0066835_10009978	All Organisms → Viruses → Predicted Viral	2391	Open in IMG/M
3300005747\|Ga0076924_1027654	All Organisms → Viruses → Predicted Viral	2995	Open in IMG/M
3300006026\|Ga0075478_10194762	All Organisms → Viruses → environmental samples → uncultured marine virus	620	Open in IMG/M
3300006029\|Ga0075466_1117478	Not Available	708	Open in IMG/M
3300006802\|Ga0070749_10043519	All Organisms → Viruses → environmental samples → uncultured marine virus	2755	Open in IMG/M
3300006802\|Ga0070749_10174556	Not Available	1240	Open in IMG/M
3300006810\|Ga0070754_10024801	All Organisms → Viruses → environmental samples → uncultured marine virus	3437	Open in IMG/M
3300006810\|Ga0070754_10284670	All Organisms → Viruses → environmental samples → uncultured marine virus	746	Open in IMG/M
3300006868\|Ga0075481_10004723	Not Available	5496	Open in IMG/M
3300006868\|Ga0075481_10213712	All Organisms → Viruses → environmental samples → uncultured marine virus	687	Open in IMG/M
3300006916\|Ga0070750_10037772	All Organisms → Viruses → environmental samples → uncultured marine virus	2380	Open in IMG/M
3300006919\|Ga0070746_10531405	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	512	Open in IMG/M
3300006920\|Ga0070748_1220023	All Organisms → Viruses → environmental samples → uncultured marine virus	689	Open in IMG/M
3300006924\|Ga0098051_1175473	All Organisms → Viruses → environmental samples → uncultured marine virus	563	Open in IMG/M
3300007276\|Ga0070747_1021518	All Organisms → Viruses → environmental samples → uncultured marine virus	2621	Open in IMG/M
3300007276\|Ga0070747_1030157	Not Available	2157	Open in IMG/M
3300007276\|Ga0070747_1057047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1487	Open in IMG/M
3300007344\|Ga0070745_1026072	All Organisms → Viruses → environmental samples → uncultured marine virus	2545	Open in IMG/M
3300009001\|Ga0102963_1049871	All Organisms → Viruses → Predicted Viral	1733	Open in IMG/M
3300009001\|Ga0102963_1096702	All Organisms → Viruses → environmental samples → uncultured marine virus	1204	Open in IMG/M
3300009071\|Ga0115566_10089739	All Organisms → Viruses → Predicted Viral	1994	Open in IMG/M
3300009074\|Ga0115549_1014558	All Organisms → Viruses → environmental samples → uncultured marine virus	3303	Open in IMG/M
3300009076\|Ga0115550_1036994	All Organisms → Viruses → Predicted Viral	2110	Open in IMG/M
3300009076\|Ga0115550_1073639	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300009076\|Ga0115550_1304909	All Organisms → Viruses → environmental samples → uncultured marine virus	511	Open in IMG/M
3300009434\|Ga0115562_1153858	Not Available	856	Open in IMG/M
3300009437\|Ga0115556_1014106	All Organisms → Viruses → Predicted Viral	4102	Open in IMG/M
3300009440\|Ga0115561_1008420	Not Available	5823	Open in IMG/M
3300009449\|Ga0115558_1176324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	891	Open in IMG/M
3300009467\|Ga0115565_10086344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1492	Open in IMG/M
3300009498\|Ga0115568_10114704	All Organisms → Viruses → Predicted Viral	1319	Open in IMG/M
3300009498\|Ga0115568_10170153	Not Available	1024	Open in IMG/M
3300009505\|Ga0115564_10139382	All Organisms → Viruses → Predicted Viral	1312	Open in IMG/M
3300009507\|Ga0115572_10158350	All Organisms → Viruses → Predicted Viral	1325	Open in IMG/M
3300009507\|Ga0115572_10411864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	756	Open in IMG/M
3300009508\|Ga0115567_10244188	Not Available	1144	Open in IMG/M
3300017697\|Ga0180120_10068689	All Organisms → Viruses → Predicted Viral	1574	Open in IMG/M
3300017709\|Ga0181387_1000257	Not Available	12403	Open in IMG/M
3300017720\|Ga0181383_1198015	Not Available	534	Open in IMG/M
3300017726\|Ga0181381_1024065	Not Available	1381	Open in IMG/M
3300017735\|Ga0181431_1009604	All Organisms → Viruses → environmental samples → uncultured marine virus	2327	Open in IMG/M
3300017746\|Ga0181389_1004482	All Organisms → Viruses → environmental samples → uncultured marine virus	5001	Open in IMG/M
3300017746\|Ga0181389_1010487	All Organisms → Viruses → Predicted Viral	3075	Open in IMG/M
3300017752\|Ga0181400_1011775	All Organisms → Viruses → Predicted Viral	3013	Open in IMG/M
3300017758\|Ga0181409_1001159	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	10228	Open in IMG/M
3300017759\|Ga0181414_1008720	All Organisms → Viruses → Predicted Viral	2810	Open in IMG/M
3300017771\|Ga0181425_1000415	Not Available	16783	Open in IMG/M
3300017772\|Ga0181430_1010273	All Organisms → Viruses → Predicted Viral	3234	Open in IMG/M
3300017772\|Ga0181430_1020294	All Organisms → Viruses → environmental samples → uncultured marine virus	2186	Open in IMG/M
3300017782\|Ga0181380_1014726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2965	Open in IMG/M
3300017782\|Ga0181380_1019629	Not Available	2526	Open in IMG/M
3300017782\|Ga0181380_1042194	Not Available	1650	Open in IMG/M
3300017782\|Ga0181380_1113983	Not Available	932	Open in IMG/M
3300017786\|Ga0181424_10016889	All Organisms → Viruses → environmental samples → uncultured marine virus	3155	Open in IMG/M
3300017786\|Ga0181424_10065841	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300017786\|Ga0181424_10363694	Not Available	593	Open in IMG/M
3300019751\|Ga0194029_1003028	All Organisms → Viruses → Predicted Viral	2197	Open in IMG/M
3300020165\|Ga0206125_10015808	All Organisms → Viruses → Predicted Viral	4821	Open in IMG/M
3300020166\|Ga0206128_1015749	All Organisms → Viruses → Predicted Viral	4516	Open in IMG/M
3300020166\|Ga0206128_1258891	Not Available	636	Open in IMG/M
3300020175\|Ga0206124_10018189	All Organisms → Viruses → Predicted Viral	3577	Open in IMG/M
3300020347\|Ga0211504_1000986	Not Available	13553	Open in IMG/M
3300021085\|Ga0206677_10394204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	525	Open in IMG/M
3300021185\|Ga0206682_10024737	All Organisms → Viruses → Predicted Viral	3703	Open in IMG/M
3300021347\|Ga0213862_10011730	All Organisms → Viruses → Predicted Viral	3380	Open in IMG/M
3300021347\|Ga0213862_10017964	Not Available	2666	Open in IMG/M
3300021371\|Ga0213863_10100704	All Organisms → Viruses → environmental samples → uncultured marine virus	1383	Open in IMG/M
3300021371\|Ga0213863_10273205	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	716	Open in IMG/M
3300021957\|Ga0222717_10025965	All Organisms → Viruses → Predicted Viral	3892	Open in IMG/M
3300021958\|Ga0222718_10037198	Not Available	3198	Open in IMG/M
3300021958\|Ga0222718_10165655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1235	Open in IMG/M
3300021959\|Ga0222716_10056733	All Organisms → Viruses → Predicted Viral	2758	Open in IMG/M
3300021959\|Ga0222716_10639754	All Organisms → Viruses → environmental samples → uncultured marine virus	574	Open in IMG/M
3300021960\|Ga0222715_10174779	All Organisms → Viruses → environmental samples → uncultured marine virus	1308	Open in IMG/M
3300021960\|Ga0222715_10364879	All Organisms → Viruses → environmental samples → uncultured marine virus	800	Open in IMG/M
3300022072\|Ga0196889_1005318	All Organisms → Viruses → Predicted Viral	2990	Open in IMG/M
3300022168\|Ga0212027_1001925	Not Available	2489	Open in IMG/M
3300022169\|Ga0196903_1002697	All Organisms → Viruses → Predicted Viral	2416	Open in IMG/M
3300022178\|Ga0196887_1138227	All Organisms → Viruses → environmental samples → uncultured marine virus	508	Open in IMG/M
3300022187\|Ga0196899_1029956	All Organisms → Viruses → environmental samples → uncultured marine virus	1916	Open in IMG/M
3300022187\|Ga0196899_1035588	All Organisms → Viruses → environmental samples → uncultured marine virus	1717	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10117584	All Organisms → Viruses → environmental samples → uncultured marine virus	1048	Open in IMG/M
3300024229\|Ga0233402_1001549	All Organisms → Viruses → environmental samples → uncultured marine virus	7557	Open in IMG/M
3300025070\|Ga0208667_1000741	Not Available	13210	Open in IMG/M
3300025085\|Ga0208792_1009024	All Organisms → Viruses → Predicted Viral	2322	Open in IMG/M
3300025127\|Ga0209348_1000177	Not Available	37310	Open in IMG/M
3300025543\|Ga0208303_1004804	All Organisms → Viruses → Predicted Viral	4698	Open in IMG/M
3300025543\|Ga0208303_1012086	All Organisms → Viruses → Predicted Viral	2634	Open in IMG/M
3300025610\|Ga0208149_1009804	Not Available	2950	Open in IMG/M
3300025620\|Ga0209405_1035564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1857	Open in IMG/M
3300025621\|Ga0209504_1005402	Not Available	7060	Open in IMG/M
3300025621\|Ga0209504_1020353	All Organisms → Viruses → Predicted Viral	2555	Open in IMG/M
3300025621\|Ga0209504_1024057	All Organisms → Viruses → Predicted Viral	2245	Open in IMG/M
3300025621\|Ga0209504_1062888	Not Available	1079	Open in IMG/M
3300025652\|Ga0208134_1015646	Not Available	2977	Open in IMG/M
3300025652\|Ga0208134_1097122	Not Available	821	Open in IMG/M
3300025652\|Ga0208134_1118997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	704	Open in IMG/M
3300025671\|Ga0208898_1016186	All Organisms → Viruses → environmental samples → uncultured marine virus	3475	Open in IMG/M
3300025690\|Ga0209505_1016927	All Organisms → Viruses → Predicted Viral	2891	Open in IMG/M
3300025694\|Ga0209406_1036561	All Organisms → Viruses → environmental samples → uncultured marine virus	1957	Open in IMG/M
3300025769\|Ga0208767_1022557	All Organisms → Viruses → environmental samples → uncultured marine virus	3447	Open in IMG/M
3300025769\|Ga0208767_1054846	All Organisms → Viruses → Predicted Viral	1833	Open in IMG/M
3300025809\|Ga0209199_1020211	All Organisms → Viruses → Predicted Viral	4178	Open in IMG/M
3300025815\|Ga0208785_1155145	Not Available	521	Open in IMG/M
3300025849\|Ga0209603_1059567	Not Available	1932	Open in IMG/M
3300025849\|Ga0209603_1166270	Not Available	878	Open in IMG/M
3300025853\|Ga0208645_1029096	All Organisms → Viruses → Predicted Viral	2895	Open in IMG/M
3300025869\|Ga0209308_10027859	All Organisms → Viruses → Predicted Viral	3271	Open in IMG/M
3300025869\|Ga0209308_10055280	All Organisms → Viruses → environmental samples → uncultured marine virus	2082	Open in IMG/M
3300025880\|Ga0209534_10044773	All Organisms → Viruses → Predicted Viral	2881	Open in IMG/M
3300025880\|Ga0209534_10044773	All Organisms → Viruses → Predicted Viral	2881	Open in IMG/M
3300025881\|Ga0209309_10135096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1273	Open in IMG/M
3300026503\|Ga0247605_1041181	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
3300026503\|Ga0247605_1101470	All Organisms → Viruses → environmental samples → uncultured marine virus	702	Open in IMG/M
3300028125\|Ga0256368_1088850	Not Available	522	Open in IMG/M
3300031519\|Ga0307488_10109086	All Organisms → Viruses → environmental samples → uncultured marine virus	2004	Open in IMG/M
3300031519\|Ga0307488_10237285	All Organisms → Viruses → Predicted Viral	1210	Open in IMG/M
3300031519\|Ga0307488_10756290	Not Available	543	Open in IMG/M
3300031569\|Ga0307489_10084370	All Organisms → Viruses → environmental samples → uncultured marine virus	1805	Open in IMG/M
3300032073\|Ga0315315_10205934	All Organisms → Viruses → environmental samples → uncultured marine virus	1836	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.83%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.45%
Freshwater	Environmental → Aquatic → Freshwater	0.72%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	34.06%
Pelagic	Environmental → Aquatic → Marine → Pelagic	23.91%
Strait	Environmental → Aquatic → Marine → Strait	14.49%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	13.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.25%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.17%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.45%
River	Environmental → Aquatic → Freshwater → River	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	34.06%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	23.91%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	14.49%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	13.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.25%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	23.19%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	21.01%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	14.49%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	7.25%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	5.80%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.07%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.07%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.90%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.90%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.90%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.17%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.45%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.45%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.72%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.72%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024229	Seawater microbial communities from Monterey Bay, California, United States - 54D	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300026503	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_1000851310	3300000101	Marine	MKKPANQTTDIQDMFNSLKPTKKEQAIVWLVSPIIVLATWSLLIFICSL*
DelMOSum2010_1001356011	3300000101	Marine	MKKPTNQTTDIQEMFDSLKPSRKEQAIVWIVSPIIVLATWALLIFICSI*
DelMOSum2010_100276984	3300000101	Marine	MKKPTNQTTDIQEMFTSLKPSRKEQAIIWLVSPVIVLASWAILIFICSL*
DelMOSum2010_102077622	3300000101	Marine	MKKPISNQSDIQEMFNSLKPTKKEQAIVWLLSPVIVLATWALLIFICSL*
DelMOSpr2010_102149541	3300000116	Marine	SKKPTNQTTDIQEMFTSLKPSRKEQAIIWLVSPVIVLASWAILIFICSL*
DelMOWin2010_100270645	3300000117	Marine	MKKPTDHTDMNQLFDSLKPSRKEQALIWLISPVIVLATWALLIFICSL*
DelMOWin2010_100312844	3300000117	Marine	MKKPTNQTSDIQDMFDSLKPSKKEQALIWLISPVIVLCTWATLIFICSL*
DelMOWin2010_101112421	3300000117	Marine	YNDIMMKKTTDRTDIEELFTSLKPSKKEQALIWLISPVIVLCTWAVLIFICSL*
JGI20156J14371_100021675	3300001347	Pelagic Marine	MKNNQENTDIKVMFDSLKPTKKEQAIVWLLSPVIVLATWAILIFICSL*
JGI20154J14316_100572225	3300001348	Pelagic Marine	MKNNQENTDIEELFNSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL*
JGI20160J14292_101086844	3300001349	Pelagic Marine	MKKNRENTDIEDMFELLKPSKKEQAIIWLVSPLIVLATWSLLIFICSL*
JGI20157J14317_100303153	3300001352	Pelagic Marine	MKKPTNQTTDIEDMFTSLKPSKKEQAIVWLLSPVIVLATWAVLIFICSL*
JGI20157J14317_100303156	3300001352	Pelagic Marine	MKNNQESTDIEDMFDSLKPSKKEQITIWLISPVIVLTSWAILIWICSQ*
JGI20159J14440_100341453	3300001353	Pelagic Marine	MKNNRDNTDIQDMFDSLKPTKKEQAIVWLVSPVIVLTSWAILIWICSQ*
JGI20159J14440_100391822	3300001353	Pelagic Marine	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL*
JGI20155J14468_1004063610	3300001354	Pelagic Marine	MKNNQENTDIQKMFNSLKPSRKEQAVIWLLSPVIVLATWAILIFICSL*
Ga0065861_10112563	3300004448	Marine	MKKPTTDIQDMFDSLKPSRKEQAIIWLVSPVIVLATWALLIFICSL*
Ga0065861_101711910	3300004448	Marine	MKKPTTDIQDMFNSLKPSRKEQAIVWLVSPVIVLASWAILIFICSL*
Ga0066835_100099789	3300005606	Marine	MKKPINQTDIDELFTSLKPSKKEQITIWIISPVIVLATWAILIFMCSL*
Ga0076924_10276547	3300005747	Marine	MKKPTNQTTDIKDMFNSLKPSRKEQAIVWLVSPVIVLASWAILIFICSL*
Ga0075478_101947624	3300006026	Aqueous	EELFTSLKPSKKEQAIIWLISPVIVLATWVTLIFICSL*
Ga0075466_11174783	3300006029	Aqueous	MKKPINNQSDIEDMFDSLKPTKKEQAIIWLVSPIIVLASWAILIFICSL*
Ga0070749_100435197	3300006802	Aqueous	MKKPTNQTSDIQDMFDSLKPTRKEQAIIWLLSPVIVLATWATLIFICSL*
Ga0070749_101745564	3300006802	Aqueous	MKKPIDHTDIQDMFNSLKPSRKEQALIWLISPVIVLATWAVLIFICSL*
Ga0070754_100248018	3300006810	Aqueous	MKKPNHQTSDIQDIFDSLKPTRKEQAVIWLISPVIVLCTWALLIFICSL*
Ga0070754_102846702	3300006810	Aqueous	MKKPIDRTDMNHLFDSLKPSRKEQAIIWLISPVIVLTSWAVLIWICSQ*
Ga0075481_100047237	3300006868	Aqueous	MKKPTDHTDMNQLFDSLKPTRKEQAIIWLLSPVIVLATWATLIFICSL*
Ga0075481_102137122	3300006868	Aqueous	MKKPTNQTSDIQDMFDSLKPTRKEQAIIWLLSPVIVLA
Ga0070750_100377722	3300006916	Aqueous	MKKSTDIEELFTSLKPSKKEQAIIWLLSPVIVLATWATLIFICSL*
Ga0070746_105314051	3300006919	Aqueous	MKKPTNQTSDIQDMFDSLKPSKKEQALIWLISPVIVLCTWAALIFICSL*
Ga0070748_12200232	3300006920	Aqueous	MKNNQENTDIQDMFDSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL*
Ga0098051_11754731	3300006924	Marine	MKKPINHSDIDELFTSLKPSKKEQAIVWLLSPVIVLATW
Ga0070747_10215188	3300007276	Aqueous	MKKPIDRTDIEDMFNSLKPSKKEQAIVWLISPVIVLCTWAVLIFICSL*
Ga0070747_10301573	3300007276	Aqueous	MKNNQENTDIEDMFNSLKPSRKEQAIVWLLSPIIVLASWAILIFICSL*
Ga0070747_10570472	3300007276	Aqueous	MKNNRENTDIEDMFDSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL*
Ga0070745_10260722	3300007344	Aqueous	MKKPNHQTSDIQDMFDSLKPTRKEQAVIWLISPVIVLCTWALLIFICSL*
Ga0102963_10498711	3300009001	Pond Water	NMKKPNHSDIEEMFTSLKPSRKEQAVIWLISPVIVLTSWAILIWICSL*
Ga0102963_10967021	3300009001	Pond Water	MKKPNHSDIEEMFTSLKPSRKEQAVIWLISPVIVLTSWAI
Ga0115566_100897393	3300009071	Pelagic Marine	MKKPISNQSDIQDMFDSLKPTKKEQAIVWLVSPLIVLTSWAVLIWLCSQ*
Ga0115549_10145588	3300009074	Pelagic Marine	MKNNQENTDIEELFNSLKPSKKEQAIVWLVSPVIVLTSWAVLIWLCSQ*
Ga0115550_10369943	3300009076	Pelagic Marine	MKKNRENTDIEDMFELLKPSKKEQAIVWLLSPVIVLATWSLLIFICSL*
Ga0115550_10736392	3300009076	Pelagic Marine	MKNNQENTDIQELFNSLKPSKKEQAIIWLVSPVIVLTSWAILIWICSQ*
Ga0115550_13049091	3300009076	Pelagic Marine	ELFNSLKPSKKEQAIVWLLSPVIVLASWAVLIFICSL*
Ga0115562_11538584	3300009434	Pelagic Marine	MKKNRENTDIEDMFELLKPNKKEQAIVWLLSPVIVLATWSLLI
Ga0115556_10141065	3300009437	Pelagic Marine	MKKPISNQSDIQELFNSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL*
Ga0115561_10084203	3300009440	Pelagic Marine	MKNNQENTDIKVMFDSLKPTKKEQAIVWLLSPVIVLASWAILIFICSL*
Ga0115558_11763244	3300009449	Pelagic Marine	MKNNQENTDIQKMFNSLKPSRKEQAVIWLLSPVIVLATWA
Ga0115565_100863444	3300009467	Pelagic Marine	MKKPISNQSDIQDMFDSLKPTKKEQAIVWLLSPVIVLTSWAVLIWLC*
Ga0115568_101147041	3300009498	Pelagic Marine	NMKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL*
Ga0115568_101701533	3300009498	Pelagic Marine	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATW
Ga0115564_101393821	3300009505	Pelagic Marine	IINKTNMKKNRENTDIEDMFELLKPSKKEQAIVWLLSPVIVLATWALLIFICSL*
Ga0115572_101583505	3300009507	Pelagic Marine	MKKPTNQTTDIEDMFTSLKPSRKEQAIVWLVSPVIVLTSWAVLIWICSQ*
Ga0115572_104118641	3300009507	Pelagic Marine	MKKPISNQSDIQVMFNSLKPSRKEQAIIWLLSPVI
Ga0115567_102441881	3300009508	Pelagic Marine	MKKPISNQSDIQDMFDSLKPTKKEQAIVWLVSPVIVLTSWAI
Ga0180120_100686894	3300017697	Freshwater To Marine Saline Gradient	MKKPIDRTDMNQLFDSLKPTRKEQAVIWLISPVIVLATWAVLIFICSL
Ga0181387_10002574	3300017709	Seawater	MKNNQENTDIQDMFDSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL
Ga0181383_11980152	3300017720	Seawater	MKNNQENTDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWAILIFICSL
Ga0181381_10240653	3300017726	Seawater	MKKPINHSDELFDSLKPSKKEQVVIWLISPVIVLATWVTLIFICS
Ga0181431_10096042	3300017735	Seawater	MKKPNHQTSDIEDMFTSLKPSRKEQAIVWLVSPVIVLATWATLIFICSL
Ga0181389_100448214	3300017746	Seawater	MKKPNHQTDIQEMFTALKPSKKEQAIVWLLSPVIVLATWSLLIFICSL
Ga0181389_10104871	3300017746	Seawater	MKKPNHQTDIKEMFTSLKPSRKEQAIVWLLSPVIVLATWATLIFICSL
Ga0181400_10117758	3300017752	Seawater	MKKPNHQTSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWFVLIFICSL
Ga0181409_100115913	3300017758	Seawater	MKKPNHQTDIEDMFTSLKPSRKEQAIVWIVSPVIVLATWAILIFICSL
Ga0181414_10087206	3300017759	Seawater	MKKPTDRTDIDNLFDSLKPSKKEQAVVWLLSPVIVLATWATLIFICSL
Ga0181425_100041510	3300017771	Seawater	MKKPINHSDIEDMFDSLKPSKKEQVVIWLISPVIVLATWATLIFICSL
Ga0181430_10102737	3300017772	Seawater	MKKPTDRTDIDNLFDSLKSSKKEQAVVWLLSPVIVLATWATLIFICSL
Ga0181430_10202943	3300017772	Seawater	MKKPTDIDNLFDSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Ga0181380_10147265	3300017782	Seawater	MKKPINHSDIDELFTSLKPSKKEQAIVWLVSPVIVLATWGVLIFICSL
Ga0181380_10196295	3300017782	Seawater	MKKPNHQTSDIQDMFDSLKPSRKEQAIVWLVSPVIVLATWALLIFICSL
Ga0181380_10421946	3300017782	Seawater	MKINRENTDIDNLFDSLKPSKKEQAIVWLLSPVIVLATWAVLIFICSL
Ga0181380_11139834	3300017782	Seawater	MKINRENTDIEDMFDSLKPSKKEQAIVWLLSPLIVLATWGLLIFICSL
Ga0181424_100168894	3300017786	Seawater	MKINRENTDIDELFNSLKPSKKEQAIVWLLSPVIVLATWATLIFICSL
Ga0181424_100658412	3300017786	Seawater	MKKPNRQTSDIKEMFESLKPTKKEQAIVWLLSPVIVLATWATLIFICSL
Ga0181424_103636941	3300017786	Seawater	KKPTDRTDIDNLFDSLKPSKKEQVVIWLISPVIVLATWATLIFICSL
Ga0194029_10030281	3300019751	Freshwater	TDIEELFTSLKPSKKEQAVIWLLSPVIVLATWGLLIFICSL
Ga0206125_100158087	3300020165	Seawater	MKKPTKQTSDIQEMFDSLKPSKKEQAIVWLVSPVIVLATWAVLIFICSL
Ga0206128_10157496	3300020166	Seawater	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Ga0206128_12588913	3300020166	Seawater	MKNNQENTDIEELFNSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL
Ga0206124_100181892	3300020175	Seawater	MKKPTKQTSDIQEMFDSLKPSKKEQAIVWLVSPVIVLATWAVLIFICSF
Ga0211504_100098618	3300020347	Marine	MKKPTNQSTDIQDMFNSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Ga0206677_103942043	3300021085	Seawater	DIKEMFDSLKPSKKEQAIVWLLSPVIVLATWSLLIFICSL
Ga0206682_100247376	3300021185	Seawater	MKKPNHQTDIEDMFTSLKPSKKEQAIVWLLSPVIVLATWSVLIFICSL
Ga0213862_100117304	3300021347	Seawater	MKKPTDIEELFTSLKPSKKEQAVIWLISPVIVLATWALLIFICSL
Ga0213862_100179646	3300021347	Seawater	MKKTEEKTDIDELFESLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Ga0213863_101007042	3300021371	Seawater	MKNNRENTDIEELFNSLKPSKKEQAIVWLLSPVIVLATWALLIFICSL
Ga0213863_102732051	3300021371	Seawater	QENTDIQEMFDSLKPSRKEQAIVWLLSPVIVLASWAILIFICSL
Ga0222717_100259658	3300021957	Estuarine Water	MKKPNHQTSDIQDMFTSLKPTKKEKAIVWLLSPVIVLATWATLIFICSL
Ga0222718_100371986	3300021958	Estuarine Water	MKKPIDHTDIEDMFDSLKPTRKEQAVIWLISPVIVLCTWAVLIFICSL
Ga0222718_101656552	3300021958	Estuarine Water	MKKPTDHTDIQDMFDSLKPSKKEQAVIWLLSPVIVLATWVLLIFICSL
Ga0222716_100567335	3300021959	Estuarine Water	MKKPTDRTDMNQLFDSLKPSKKEQAVIWLISPVIVLATWAVLIFICSL
Ga0222716_106397541	3300021959	Estuarine Water	MKKPNRQTSDIKEMFESLKPTKKEQAIVWLLSPVIVLATWATLIF
Ga0222715_101747793	3300021960	Estuarine Water	MKKPTDHTDMDQLFDSLKPTRKEQAVIWLISPVIVLATWAALIFICSL
Ga0222715_103648792	3300021960	Estuarine Water	MKKPNHQTSDIQDMFTSLKPTKKEKAIVWLLSPVIVLATWA
Ga0196889_100531810	3300022072	Aqueous	MKKPINNQSDIEDMFDSLKPTKKEQAIIWLVSPIIVLASWAILIFICSL
Ga0212027_10019253	3300022168	Aqueous	MKKPTDHTDMNQLFDSLKPSRKEQALIWLISPVIVLATWALLIFICSL
Ga0196903_10026975	3300022169	Aqueous	MKKPINNQSDIQEMFNSLKPSRKEQAIIWLLSPIIVLASWAILIFICSL
Ga0196887_11382272	3300022178	Aqueous	MKKPISNQSDIEEMFDSLKPSRKEQAIVWLVSPIIVLASWAILIFI
Ga0196899_10299564	3300022187	Aqueous	MKKPTNQTSDIQDMFDSLKPTRKEQAIIWLLSPVIVLATWATLIFICSL
Ga0196899_10355882	3300022187	Aqueous	MKKPIDRTDIEDMFNSLKPSKKEQAIIWLLSPVIVLATWATLIFICSL
(restricted) Ga0255040_101175843	3300024059	Seawater	MKKPNHQTDIKEMFDSLKPSKKEQAIVWIVSPVIVLATWATLIFICSL
Ga0233402_100154912	3300024229	Seawater	MKKPNHQTSDIEEMFESLKASRKEQAIVWLVSPVIVLATWATLIFICSL
Ga0208667_100074113	3300025070	Marine	MKKPINQTDIDELFTSLKPSRKEQAIVWLVSPVIVLATWATLIFICSL
Ga0208792_10090245	3300025085	Marine	MKKPNHSDIEEMFDSLKPSKKEQAVVWLLSPVIVLATWAVLIFICSL
Ga0209348_100017742	3300025127	Marine	MKKPINQTDIDELFTSLKPSKKEQITIWIISPVIVLATWAILIFMCSL
Ga0208303_10048048	3300025543	Aqueous	MKKPINQTSDIQEMFNSLKPSKKEQAIIWLLSPIIVLATWAILIFICSL
Ga0208303_10120868	3300025543	Aqueous	MKKPTNQTSDIEDMFDSLKPSKKEQAIIWLISPVIVLATWGLLIFICSL
Ga0208149_10098046	3300025610	Aqueous	MKKPTDHTDMNQLFDSLKPTRKEQAIIWLLSPVIVLATWATLIFICSL
Ga0209405_10355644	3300025620	Pelagic Marine	MKNNQENTDIKVMFDSLKPTKKEQAIVWLLSPVIVLATWAILIFICSL
Ga0209504_10054027	3300025621	Pelagic Marine	MKKPISNQSDIQDMFDSLKPTKKEQAIVWLVSPLIVLTSWAVLIWLCSQ
Ga0209504_10203535	3300025621	Pelagic Marine	MKNNQENTDIQELFNSLKPSKKEQAIIWLVSPVIVLTSWAILIWICSQ
Ga0209504_10240573	3300025621	Pelagic Marine	MKKNRENTDIEDMFELLKPSKKEQAIVWLLSPVIVLATWSLLIFICSL
Ga0209504_10628881	3300025621	Pelagic Marine	MKKPISNQSDIKNMFESLKPSKKEQAIMWLLSPVIVLASWAILIFICSL
Ga0208134_10156464	3300025652	Aqueous	MKNNQENTDIEDMFNSLKPSRKEQAIVWLLSPIIVLASWAILIFICSL
Ga0208134_10971221	3300025652	Aqueous	MKKPIDRTDIEDMFNSLKPSKKEQAIVWLISPVIVLCTWAVLI
Ga0208134_11189973	3300025652	Aqueous	MKNNRENTDIEDMFDSLKPSKKEQAIVWLLSPVIVLASWAILIFICSL
Ga0208898_10161864	3300025671	Aqueous	MKKPNHQTSDIQDMFDSLKPTRKEQAVIWLISPVIVLCTWALLIFICSL
Ga0209505_10169271	3300025690	Pelagic Marine	MKNNQENTDIQKMFNSLKPSRKEQAVIWLLSPVIVLATWAILIFIC
Ga0209406_10365611	3300025694	Pelagic Marine	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVLA
Ga0208767_10225577	3300025769	Aqueous	MKKPTNQTSDIQDMFDSLKPSKKEQALIWLISPVIVLCTWATLIFICSL
Ga0208767_10548467	3300025769	Aqueous	MKKPNIDHSDANQVFDSLKPTKKEVIAIWLISPVIVLTSWAVLIWICSQ
Ga0209199_10202117	3300025809	Pelagic Marine	MKNNQENTDIKVMFDSLKPTKKEQAIVWLLSPVIVLQRGQS
Ga0208785_11551451	3300025815	Aqueous	MKKPTDHTDMNQLFDSLKPSRKEQALIWLISPVIVLATWALLI
Ga0209603_10595675	3300025849	Pelagic Marine	MKKNRENTDIEDMFELLKPSKKEQAIIWLVSPLIVLATWSLLIFICSL
Ga0209603_11662701	3300025849	Pelagic Marine	MKKPISNQSDIQDMFDSLKPSKKEQAIVWLLSPVIVL
Ga0208645_10290963	3300025853	Aqueous	MKKPTDIEELFTSLKPSKKEQAIIWLISPVIVLATWVTLIFICSL
Ga0209308_100278593	3300025869	Pelagic Marine	MKNNRDNTDIQDMFDSLKPTKKEQAIVWLVSPVIVLTSWAILIWICSQ
Ga0209308_100552803	3300025869	Pelagic Marine	MKKPISNQSDIQDMFDSLKPSRKEQAIVWLVSPVIVLTSWAILIWICSQ
Ga0209534_100447733	3300025880	Pelagic Marine	MKKPTNQTTDIEDMFTSLKPSKKEQAIVWLLSPVIVLATWAVLIFICSL
Ga0209534_100447736	3300025880	Pelagic Marine	MKNNQESTDIEDMFDSLKPSKKEQITIWLISPVIVLTSWAILIWICSQ
Ga0209309_101350961	3300025881	Pelagic Marine	MKKPISNQSDIQDMFDSLKPTKKEQAIVWLVSPLI
Ga0247605_10411811	3300026503	Seawater	KMKKPNHQTSDIEEMFESLKASRKEQAIVWLVSPVIVLATWATLIFICSL
Ga0247605_11014702	3300026503	Seawater	MKKPNHQTSDIEEMFESLKASRKEQAIVWLVSPVIVLATW
Ga0256368_10888501	3300028125	Sea-Ice Brine	DMFASLKPSKKEQAIVWIVSPVIVLATWGLLIFICSL
Ga0307488_101090865	3300031519	Sackhole Brine	MKKPNHQTDIEELFDSLKPSRKEQAIVWLLSPVIVLATWTLLIFICSL
Ga0307488_102372853	3300031519	Sackhole Brine	MNDLTNRKNNMKKPTNDIQDMLESLKPTKKEQAIVWLLSPVIVLATWATLIFICSL
Ga0307488_107562903	3300031519	Sackhole Brine	MKKPTNDIQDMLESLKPTKKEQAIVWLLSPVIVLATWATLIFICSL
Ga0307489_100843705	3300031569	Sackhole Brine	MKKPNHQTDIEELFDSLKPSRKEQAIVWLLSPVIVLATWSLLIFICSL
Ga0315315_102059345	3300032073	Seawater	MKPNHQTDIQEMFTSLKPSRKEQAIVWLLSPVIVLATWALL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters