Metagenome / Metatranscriptome Family F055542

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055542
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	48 residues
Representative Sequence	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILASFLY
Number of Associated Samples	99
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.22 %
% of genes near scaffold ends (potentially truncated)	76.09 %
% of genes from short scaffolds (< 2000 bps)	88.41 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (31.884 % of family members)
Environment Ontology (ENVO)	Unclassified (74.638 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.928 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.16% β-sheet: 0.00% Coil/Unstructured: 61.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00805	Pentapeptide	9.42
PF00589	Phage_integrase	4.35
PF00353	HemolysinCabind	2.17
PF01037	AsnC_trans_reg	1.45
PF02796	HTH_7	1.45
PF03992	ABM	1.45
PF08548	Peptidase_M10_C	1.45
PF08238	Sel1	0.72
PF10544	T5orf172	0.72
PF01323	DSBA	0.72
PF13683	rve_3	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	9.42
COG2931	Ca2+-binding protein, RTX toxin-related	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	39.86 %
Viruses	superkingdom	All Organisms → Viruses	10.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.23 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	31.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	8.70 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	6.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	3.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.62 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	2.17 %
Planktotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea	1.45 %
Lentibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lentibacter	1.45 %
Planktomarina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.62 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.17 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	2.17 %
Planktotalea frisia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	1.45 %
Rhodobacteraceae bacterium SB2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2	1.45 %
Lentibacter algarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lentibacter → Lentibacter algarum	1.45 %
Planktomarina temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.14 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.62 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2.17 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	2.17 %
Planktotalea frisia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	1.45 %
Rhodobacteraceae bacterium SB2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2	1.45 %
Lentibacter algarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lentibacter → Lentibacter algarum	1.45 %
Planktomarina temperata RCA23	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	0.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000929\|NpDRAFT_10042037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	2641	Open in IMG/M
3300001344\|JGI20152J14361_10047805	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300001344\|JGI20152J14361_10086294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	664	Open in IMG/M
3300001344\|JGI20152J14361_10088779	Not Available	647	Open in IMG/M
3300001344\|JGI20152J14361_10118404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	504	Open in IMG/M
3300001352\|JGI20157J14317_10034705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2566	Open in IMG/M
3300001352\|JGI20157J14317_10052418	All Organisms → Viruses → Predicted Viral	1865	Open in IMG/M
3300001352\|JGI20157J14317_10149723	Not Available	730	Open in IMG/M
3300001355\|JGI20158J14315_10148123	Not Available	722	Open in IMG/M
3300001938\|GOS2221_1014210	Not Available	1732	Open in IMG/M
3300003583\|JGI26253J51717_1009726	All Organisms → Viruses → Predicted Viral	2726	Open in IMG/M
3300003583\|JGI26253J51717_1020913	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300003583\|JGI26253J51717_1058798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	703	Open in IMG/M
3300003620\|JGI26273J51734_10079693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	948	Open in IMG/M
3300004279\|Ga0066605_10171663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	848	Open in IMG/M
3300005837\|Ga0078893_10424960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lentibacter → Lentibacter algarum	1073	Open in IMG/M
3300005837\|Ga0078893_11420167	Not Available	1457	Open in IMG/M
3300006803\|Ga0075467_10182050	Not Available	1182	Open in IMG/M
3300006803\|Ga0075467_10733981	Not Available	502	Open in IMG/M
3300007554\|Ga0102820_1032676	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300007554\|Ga0102820_1058622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	930	Open in IMG/M
3300007634\|Ga0102901_1232430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	517	Open in IMG/M
3300007681\|Ga0102824_1011396	All Organisms → Viruses → Predicted Viral	2431	Open in IMG/M
3300009054\|Ga0102826_1086222	Not Available	751	Open in IMG/M
3300009071\|Ga0115566_10158200	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300009071\|Ga0115566_10379917	Not Available	818	Open in IMG/M
3300009071\|Ga0115566_10611940	Not Available	609	Open in IMG/M
3300009071\|Ga0115566_10680414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300009074\|Ga0115549_1201567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	635	Open in IMG/M
3300009079\|Ga0102814_10080167	Not Available	1794	Open in IMG/M
3300009086\|Ga0102812_10407846	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009086\|Ga0102812_10436694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	714	Open in IMG/M
3300009193\|Ga0115551_1369226	Not Available	619	Open in IMG/M
3300009426\|Ga0115547_1036990	Not Available	1788	Open in IMG/M
3300009432\|Ga0115005_10046046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3348	Open in IMG/M
3300009433\|Ga0115545_1155476	Not Available	796	Open in IMG/M
3300009433\|Ga0115545_1162595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	774	Open in IMG/M
3300009433\|Ga0115545_1306853	Not Available	527	Open in IMG/M
3300009435\|Ga0115546_1098377	Not Available	1065	Open in IMG/M
3300009436\|Ga0115008_10888479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	658	Open in IMG/M
3300009438\|Ga0115559_1077392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1344	Open in IMG/M
3300009438\|Ga0115559_1130670	Not Available	949	Open in IMG/M
3300009442\|Ga0115563_1379682	Not Available	503	Open in IMG/M
3300009443\|Ga0115557_1076365	Not Available	1451	Open in IMG/M
3300009443\|Ga0115557_1234689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	706	Open in IMG/M
3300009443\|Ga0115557_1382094	Not Available	521	Open in IMG/M
3300009445\|Ga0115553_1295668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	626	Open in IMG/M
3300009447\|Ga0115560_1134380	Not Available	991	Open in IMG/M
3300009449\|Ga0115558_1432825	Not Available	510	Open in IMG/M
3300009467\|Ga0115565_10441313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	586	Open in IMG/M
3300009472\|Ga0115554_1442529	Not Available	506	Open in IMG/M
3300009495\|Ga0115571_1070202	Not Available	1571	Open in IMG/M
3300009496\|Ga0115570_10063529	All Organisms → Viruses → Predicted Viral	1910	Open in IMG/M
3300009496\|Ga0115570_10361570	Not Available	620	Open in IMG/M
3300009496\|Ga0115570_10385602	Not Available	597	Open in IMG/M
3300009497\|Ga0115569_10317007	Not Available	685	Open in IMG/M
3300009497\|Ga0115569_10429574	Not Available	567	Open in IMG/M
3300009498\|Ga0115568_10388247	Not Available	606	Open in IMG/M
3300009505\|Ga0115564_10128090	Not Available	1384	Open in IMG/M
3300009507\|Ga0115572_10271464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	966	Open in IMG/M
3300009508\|Ga0115567_10586212	Not Available	673	Open in IMG/M
3300009526\|Ga0115004_10559215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	678	Open in IMG/M
3300009544\|Ga0115006_10697376	Not Available	893	Open in IMG/M
3300013010\|Ga0129327_10088928	Not Available	1522	Open in IMG/M
3300016791\|Ga0182095_1596578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1130	Open in IMG/M
3300017824\|Ga0181552_10223631	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300017950\|Ga0181607_10412237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	735	Open in IMG/M
3300018036\|Ga0181600_10322229	Not Available	770	Open in IMG/M
3300018048\|Ga0181606_10169482	Not Available	1295	Open in IMG/M
3300018048\|Ga0181606_10461801	Not Available	669	Open in IMG/M
3300018048\|Ga0181606_10678571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300018417\|Ga0181558_10430963	Not Available	695	Open in IMG/M
3300018417\|Ga0181558_10460996	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300020053\|Ga0181595_10304216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	652	Open in IMG/M
3300020165\|Ga0206125_10006810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	9104	Open in IMG/M
3300020165\|Ga0206125_10255443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	666	Open in IMG/M
3300020166\|Ga0206128_1124423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1076	Open in IMG/M
3300020166\|Ga0206128_1138485	Not Available	997	Open in IMG/M
3300020166\|Ga0206128_1219056	Not Available	718	Open in IMG/M
3300020169\|Ga0206127_1098110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1250	Open in IMG/M
3300020169\|Ga0206127_1179378	Not Available	789	Open in IMG/M
3300020175\|Ga0206124_10054513	Not Available	1746	Open in IMG/M
3300020178\|Ga0181599_1060862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktotalea → Planktotalea frisia	1835	Open in IMG/M
3300020182\|Ga0206129_10226934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	803	Open in IMG/M
3300020185\|Ga0206131_10110272	Not Available	1549	Open in IMG/M
3300020185\|Ga0206131_10324555	Not Available	676	Open in IMG/M
3300020187\|Ga0206130_10431774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	518	Open in IMG/M
3300020187\|Ga0206130_10440059	Not Available	511	Open in IMG/M
3300020372\|Ga0211683_10122975	Not Available	837	Open in IMG/M
3300020595\|Ga0206126_10049456	All Organisms → Viruses → Predicted Viral	2302	Open in IMG/M
3300021371\|Ga0213863_10432856	Not Available	526	Open in IMG/M
3300021378\|Ga0213861_10036986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	3243	Open in IMG/M
3300021378\|Ga0213861_10336846	Not Available	762	Open in IMG/M
3300022900\|Ga0255771_1268360	Not Available	578	Open in IMG/M
3300022926\|Ga0255753_1342650	Not Available	561	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10350222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	663	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10261406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	679	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10161935	All Organisms → Viruses → Predicted Viral	1072	Open in IMG/M
3300024346\|Ga0244775_10078234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	2829	Open in IMG/M
3300025577\|Ga0209304_1141989	Not Available	504	Open in IMG/M
3300025594\|Ga0209094_1032208	All Organisms → Viruses → Predicted Viral	1505	Open in IMG/M
3300025608\|Ga0209654_1132977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	623	Open in IMG/M
3300025617\|Ga0209138_1051244	Not Available	1471	Open in IMG/M
3300025620\|Ga0209405_1036708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Lentibacter → Lentibacter algarum	1814	Open in IMG/M
3300025632\|Ga0209194_1166756	Not Available	509	Open in IMG/M
3300025640\|Ga0209198_1071174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1185	Open in IMG/M
3300025640\|Ga0209198_1191011	Not Available	529	Open in IMG/M
3300025641\|Ga0209833_1029349	All Organisms → Viruses → Predicted Viral	2073	Open in IMG/M
3300025696\|Ga0209532_1072993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2	1269	Open in IMG/M
3300025701\|Ga0209771_1080511	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300025704\|Ga0209602_1163056	Not Available	701	Open in IMG/M
3300025705\|Ga0209374_1123519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	758	Open in IMG/M
3300025816\|Ga0209193_1014061	Not Available	2685	Open in IMG/M
3300025816\|Ga0209193_1087335	Not Available	794	Open in IMG/M
3300025849\|Ga0209603_1108572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1218	Open in IMG/M
3300025860\|Ga0209119_1128358	Not Available	1077	Open in IMG/M
3300025860\|Ga0209119_1170657	Not Available	874	Open in IMG/M
3300025860\|Ga0209119_1337417	Not Available	520	Open in IMG/M
3300025869\|Ga0209308_10025014	All Organisms → Viruses → Predicted Viral	3511	Open in IMG/M
3300025874\|Ga0209533_1156300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2	1016	Open in IMG/M
3300025876\|Ga0209223_10053172	All Organisms → Viruses → Predicted Viral	2453	Open in IMG/M
3300025886\|Ga0209632_10028217	All Organisms → Viruses → Predicted Viral	3896	Open in IMG/M
3300025886\|Ga0209632_10133795	Not Available	1391	Open in IMG/M
3300025890\|Ga0209631_10112950	All Organisms → Viruses → Predicted Viral	1537	Open in IMG/M
3300025892\|Ga0209630_10148017	Not Available	1197	Open in IMG/M
3300025892\|Ga0209630_10449245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	544	Open in IMG/M
3300025897\|Ga0209425_10250311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	913	Open in IMG/M
3300027757\|Ga0208671_10129123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	923	Open in IMG/M
3300027780\|Ga0209502_10269358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	747	Open in IMG/M
3300027849\|Ga0209712_10424064	Not Available	748	Open in IMG/M
3300027883\|Ga0209713_10255513	Not Available	1173	Open in IMG/M
3300028133\|Ga0228609_1060462	Not Available	1021	Open in IMG/M
3300028287\|Ga0257126_1174501	Not Available	691	Open in IMG/M
3300031622\|Ga0302126_10284870	Not Available	561	Open in IMG/M
3300031638\|Ga0302125_10176295	Not Available	670	Open in IMG/M
3300031706\|Ga0307997_10017775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3192	Open in IMG/M
3300031706\|Ga0307997_10063468	Not Available	1526	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	42.03%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.46%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	15.22%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.52%
Coastal	Environmental → Aquatic → Marine → Coastal	6.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.35%
Inlet	Environmental → Aquatic → Marine → Inlet	2.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	42.03%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	15.22%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	10.14%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.52%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.52%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.90%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	31.88%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	14.49%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	10.14%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	10.14%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.52%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	5.80%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.17%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.17%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.45%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.45%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.72%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.72%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.72%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300003583	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300009054	Estuarine microbial communities from the Columbia River estuary - metaG S.737	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025594	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027883	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031638	Marine microbial communities from Western Arctic Ocean, Canada - CB4_surface	Environmental	Open in IMG/M
3300031706	Marine microbial communities from David Island wharf, Antarctic Ocean - #36	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_100420373	3300000929	Freshwater And Marine	MNKRFKPQYLPYNDDAEALVESLAAELQLTLKDKTGAKHRTILSSF
JGI20152J14361_100478051	3300001344	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTVLASFLYCVQEADV
JGI20152J14361_100862941	3300001344	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAK
JGI20152J14361_100887791	3300001344	Pelagic Marine	MNKRFKPQHLPYNDDAHALVEALAVELGLSLKGITGGKHKT
JGI20152J14361_101184041	3300001344	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTILASFLY*
JGI20157J14317_100347053	3300001352	Pelagic Marine	MNERFKPQYLPHNDDAHALVKALAVELRLTLKGITGEG*
JGI20157J14317_100524181	3300001352	Pelagic Marine	MNKLFKPQYLPYNDDAHALVVALAVELGLSLKGITGAKHETILASFLYCVQEA
JGI20157J14317_101497231	3300001352	Pelagic Marine	MNKRFKPQHLPYNDDAHALVEALAAELELGLSLKGITGAKHKTILASFLHCVQ
JGI20158J14315_101481231	3300001355	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALAAELGLSLKGITGAKHKTILA
GOS2221_10142101	3300001938	Marine	MNKRYKPQYLPQNDDAHALVEALAMELGLTVSGITGAKHKTILASFLYCVQEAGVG
JGI26253J51717_10097266	3300003583	Marine	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHKTIL
JGI26253J51717_10209132	3300003583	Marine	MNKRFKPQYLPYNDDAHALIEALAMELGLSLKGSTGAKHKTILA
JGI26253J51717_10587982	3300003583	Marine	MNKRFKPQYLPHNDDAHALIEALAMELXLTLKNSAGAKHKTILASF
JGI26273J51734_100796932	3300003620	Marine	MNKRFKPQHLPYNDDAHALVVALAAELGLSLKGITGAKHKTILASFLCCVQEAE
Ga0066605_101716631	3300004279	Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTMLASFLH*
Ga0078893_104249603	3300005837	Marine Surface Water	MNKRFKPQYLPYNDDAHALVKALAVELRLTLKGITGEG*
Ga0078893_114201674	3300005837	Marine Surface Water	MNKRFKPQYLPHNDDAHALVEALAVELGLTLSGITGAKHKTVLASFLYCVQEAGV
Ga0075467_101820502	3300006803	Aqueous	MNKRFKPQYLPHNDDANALVEALAVELGLSLKGITGAKHKTILASFLYCVQEAGVGAYLDWS
Ga0075467_107339811	3300006803	Aqueous	MNKLFKPQYLPYSDDAHALVEALAMELGLTLKSSAGAKHKTILASFLY*
Ga0102820_10326762	3300007554	Estuarine	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHKTILASFLYQRWA
Ga0102820_10586221	3300007554	Estuarine	MNKRFKPQYLPYNDEAEALVESLAAELQLTLKDKTGAKHRTILSSFLYFVQEAGVGALLG
Ga0102901_12324302	3300007634	Estuarine	MNKRFKPQYLPYNDDAEALVESLAAELQLTLKDKTGAKHRTILSSFLYCVQEAGVGALLDWS
Ga0102824_10113961	3300007681	Estuarine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKNSAGAKHKTILASFLY*
Ga0102826_10862221	3300009054	Estuarine	MNKRFKPQHLPYNDDAHALVVALAAELGLSLKGITGAKHKTILASFLCCVQEAEVGAYLD
Ga0115566_101582001	3300009071	Pelagic Marine	DAHALVEALAVELGLTLSGITGAKHKTILSSFLY*
Ga0115566_103799172	3300009071	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALAAELGLSLKGITGAKHKTTFTNT*
Ga0115566_106119401	3300009071	Pelagic Marine	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHNTILASFLYQRWAYQS*
Ga0115566_106804141	3300009071	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILALG
Ga0115549_12015672	3300009074	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY*
Ga0102814_100801675	3300009079	Estuarine	MNKRFKPQYLPHNDDAHALVEALAVELGLLLKGITGAKHKT
Ga0102812_104078462	3300009086	Estuarine	MNKRFKPQYLPYNDDAHALVQALAAELGLLLKGITGAKHKTILASFLCCVQEAEV
Ga0102812_104366941	3300009086	Estuarine	MNKRFKPQYLPHNNDAHALVEALAVELGLSLKGITGAKYK
Ga0115551_13692261	3300009193	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALVAELGLSLKGITGAKHKTILASFLHCVQEA
Ga0115547_10369902	3300009426	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAMELGLTLSGITGAKHKTILSSFLY*
Ga0115005_100460468	3300009432	Marine	MNKRFNPQYLPYNDAAHAVVETLAAELGLTLNAATGAKHKAIL*
Ga0115545_11554762	3300009433	Pelagic Marine	VYYHINKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTILASFLYCVQE
Ga0115545_11625951	3300009433	Pelagic Marine	MNKRFKPQHLPHNDDAHALVEALAEELGLSLKGITGAKHKTILASFLHCVQEAGVGAYLDWSG
Ga0115545_13068531	3300009433	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGA
Ga0115546_10983772	3300009435	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAAELGLSLKGITGA
Ga0115008_108884791	3300009436	Marine	MNERFKPQYPPHNDDAHALVEALAVELGLTLSGITGAKHRTILSSFLY*
Ga0115559_10773922	3300009438	Pelagic Marine	MNMRYKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY*
Ga0115559_11306701	3300009438	Pelagic Marine	MNKRFKPQYLPYNHDACALVEALAVELGLSLKGITGAKHKKILASFLYYVQEA
Ga0115563_13796821	3300009442	Pelagic Marine	MNKRFKPQYLPYNHDAHALVEALAVELGLSLKGITGAKHKTIL
Ga0115557_10763654	3300009443	Pelagic Marine	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHNTILASFLYQRWAYQ
Ga0115557_12346892	3300009443	Pelagic Marine	MNKRFKPQYLPYNHDACALVEALAVELGLSLKGITGAKHKTILASFLY*
Ga0115557_13820941	3300009443	Pelagic Marine	MNKRFKPQHLPYNDDAHALVEALAAELCLSLKGITGATHKTIL
Ga0115553_12956681	3300009445	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAVELGLTLSGITGAKHKTILSSFLY*
Ga0115560_11343803	3300009447	Pelagic Marine	MNKRFKPQYLPYNNDAHALVKALAVELGLTLKGITGAKH
Ga0115558_14328251	3300009449	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAVELGLSLKGIT
Ga0115565_104413132	3300009467	Pelagic Marine	MNKRFKPQYLPYNDAAHALVEALAVELGLSLKGITGAKHKTILSSFLY*
Ga0115554_14425291	3300009472	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELVLSLKGITGAKHKTILASYLYC
Ga0115571_10702022	3300009495	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKKIL
Ga0115570_100635292	3300009496	Pelagic Marine	MNMRYKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTILASFLY*
Ga0115570_103615701	3300009496	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKYKTILPSFLYCVQEAGVGAYL
Ga0115570_103856021	3300009496	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEA
Ga0115569_103170071	3300009497	Pelagic Marine	MNKRFKPQYLPYNDDAHALFKALAVELGLTLKGITGAKHKTILASFLYCAQEA
Ga0115569_104295741	3300009497	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKSITGAKHKTILASFLHCVQEAGVGAYLD
Ga0115568_103882472	3300009498	Pelagic Marine	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHN
Ga0115564_101280904	3300009505	Pelagic Marine	MNKRYKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTI
Ga0115572_102714641	3300009507	Pelagic Marine	MNKRYKPQYLPHNDDAHALVEDLALELGLTLKGITGAKHKTILASFLHCVQEAGVGAY
Ga0115567_105862121	3300009508	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTILA
Ga0115004_105592152	3300009526	Marine	MNKRFKPQYLPYNYDARALVQTLAAELGLTLKGKTGAKHNAILA
Ga0115006_106973762	3300009544	Marine	MIKRFKPQYLPYNDDAHSMVEALAVELELTIKNSTGAKHKT
Ga0129327_100889282	3300013010	Freshwater To Marine Saline Gradient	MNKRFQPQYLPHNDDAHALIEALAMELGLTLSGITGAKHKTILSSFLY*
Ga0182095_15965781	3300016791	Salt Marsh	MNKRFKPLYLPYNNDACALVEALAAELCLSLKGITGAKHKTILASFLHCVQEAGVGAYLDWS
Ga0182090_13309013	3300016797	Salt Marsh	MNKRYKPQYIPHNDDAHALVEALAMELGLTLSGITGAK
Ga0181552_102236311	3300017824	Salt Marsh	MNKRYKPQYLPYNDDAHAFVKALTVELGLTLKNSAGHTK
Ga0181607_104122371	3300017950	Salt Marsh	MNKRFKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGVG
Ga0181600_103222291	3300018036	Salt Marsh	MNKRFKPQYLPHNDDAHALVEALAAELGLSLTGITGAKHKTILASFLHCVQEAGVGA
Ga0181606_101694821	3300018048	Salt Marsh	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHKTILASFLYQRWAYQ
Ga0181606_104618012	3300018048	Salt Marsh	MNKRYKPQYLPHNDDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAG
Ga0181606_106785712	3300018048	Salt Marsh	MNKRFKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGVGAYLDWSG
Ga0181558_104309632	3300018417	Salt Marsh	MNKRFKPQYLPYNNDAHSLVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGVGAYLD
Ga0181558_104609961	3300018417	Salt Marsh	MNKRFKPQYLPYNNDACALVEALAAELGLSLKGIKGAKHKTIL
Ga0181595_103042162	3300020053	Salt Marsh	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILASFLY
Ga0206125_100068104	3300020165	Seawater	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY
Ga0206125_102554431	3300020165	Seawater	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKH
Ga0206128_11244232	3300020166	Seawater	MNKRFKPQYLPYNDDAHALVKALAVELRLTLKGITGEG
Ga0206128_11384851	3300020166	Seawater	MNKRFKPQYLPHNDDAHALVEALAMELGLTLKNSAGAKH
Ga0206128_12190562	3300020166	Seawater	MNKRFKPQYLPYNDDANALVEALAVELGLTLKGITGAKHKTILASFLYCVQEADVGAYLPRSKG
Ga0206127_10981103	3300020169	Seawater	MNRRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY
Ga0206127_11793781	3300020169	Seawater	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKKILASFL
Ga0206124_100545132	3300020175	Seawater	MNKRFKPQYLPYNNDAHALVKALAVELGLTLKGITGAKHKTILSSFLYCVQEAGG
Ga0181599_10608621	3300020178	Salt Marsh	MNKRFKPQYLPYNNDAHALVEALAVELGLTLKGITGAKHK
Ga0206129_102269342	3300020182	Seawater	MNMRYKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTILASFLY
Ga0206131_101102721	3300020185	Seawater	MNKRFKPQYLPYNNDAHALVEALAVELGLSLKGITGAST
Ga0206131_103245551	3300020185	Seawater	MNKRFKPQHLPYNDDAHALVEALAVELGLSLKGNTGGKHK
Ga0206130_104317742	3300020187	Seawater	RFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY
Ga0206130_104400591	3300020187	Seawater	MIKRFKPQYLPYNDDAHSMVETLAVELELTLKSSTGAKHKTILASFLCCVQEAG
Ga0211683_101229752	3300020372	Marine	MTKRFKPQYLPHNDDACGLVETLAAKLSLTLNAATGAKHKAILASFLYCVQKAGVGSFLDWP
Ga0206126_100494562	3300020595	Seawater	MNMRYKPQYLPYNDDAHALVEALAVELGLTLKGITGAKS
Ga0213863_104328561	3300021371	Seawater	MNKRFKPQYLPHNDDAHALVEALAAELGLSLKGITGAKHKTILASFLYCVQEAGVGA
Ga0213861_100369861	3300021378	Seawater	MNKRFKPQYLPHNDDAHALVEALAAELGLSLKSSTGAEHKTILASFLYQRWAYQS
Ga0213861_103368461	3300021378	Seawater	MNKRFKPQYLPHNDDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGV
Ga0255771_12683601	3300022900	Salt Marsh	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGVTH
Ga0255753_13426502	3300022926	Salt Marsh	MNKRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILASF
(restricted) Ga0233432_103502221	3300023109	Seawater	MNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHKTILASFLYQRWAYQS
(restricted) Ga0233438_102614062	3300024255	Seawater	QHLPYNDDAHALVETLAVELGLTLKGITGAKHKTILSSFLY
(restricted) Ga0233444_101619352	3300024264	Seawater	MNKRFKPQYLSHNDDAHALVETLAVELGLTLKGITGAKHKTILSSFLY
Ga0244775_100782348	3300024346	Estuarine	MNKRFKPQYLPYNDDAEALVESLAAELQLTLKGKTGAKHRTILASFLY
Ga0209304_11419891	3300025577	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAVELGLSLKGITGGKHKTILASFLHCVQEAGVGAYLDWSGGTT
Ga0209094_10322081	3300025594	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTILASFLY
Ga0209654_11329772	3300025608	Marine	LPHNDDAHALIEALAAELGLSLKGITGAKHKTILSSFLY
Ga0209138_10512445	3300025617	Marine	MNKRFKPQYLPYNNDACALVEALAAELCLSLKGITGAKHKTILASFLHCVQEAGVGAH
Ga0209405_10367083	3300025620	Pelagic Marine	MNERFKPQYLPHNDDAHALVKALAVELRLTLKGITGEG
Ga0209194_11667562	3300025632	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAMELGLTLSGITGAKHKTILSSFLY
Ga0209198_10711742	3300025640	Pelagic Marine	YHMNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHNTILASFLYQRWAYQS
Ga0209198_11910111	3300025640	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALAAELGLSLKGITGAKHKTILS
Ga0209833_10293491	3300025641	Pelagic Marine	NSHMNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHNTILASFLYQRWAYQS
Ga0209532_10729931	3300025696	Pelagic Marine	MNKRYKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEA
Ga0209771_10805111	3300025701	Marine	NKRFKPQYLSHHDDAHALVETLAVELGLTLKGITGAKHKTILSSFLY
Ga0209602_11630561	3300025704	Pelagic Marine	MNKRFKPQHLPYNDDAHALVEALAVELGLSLKGITGGKHKTILASFLH
Ga0209374_11235192	3300025705	Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLSLKGITGAKHKTMLASFLH
Ga0209193_10140611	3300025816	Pelagic Marine	MNKRFKPQYLPYNNDAHALVEALAVELGLSLKGITGAKHKTILASFLHCVQEAGVG
Ga0209193_10873351	3300025816	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTILASFLYCVQE
Ga0209603_11085722	3300025849	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALAAELGLSLKGITGAKHKTILAS
Ga0209119_11283582	3300025860	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKGITGAKHKTVLASFLYCVQEADVGAYLD
Ga0209119_11706572	3300025860	Pelagic Marine	MNKRYKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGV
Ga0209119_13374171	3300025860	Pelagic Marine	MNKRFKPQYLPYNNDAHALVGALAAELGLSLKGITGA
Ga0209308_100250141	3300025869	Pelagic Marine	NDAHALVEALAVELGLTLSGITGAKHKTILSSFLY
Ga0209533_11563001	3300025874	Pelagic Marine	MNKRYKPQYLPYNNDAHALVEALAAELGLSLKGITGAKHKTILASFLHCVQEAGVGAY
Ga0209223_100531723	3300025876	Pelagic Marine	HMNKRFQPQYLPHNDDAHALIEALAMELGLSLKGSTGAKHNTILASFLYQRWAYQS
Ga0209632_100282177	3300025886	Pelagic Marine	MNKLFKPQYLPYNDDAHALVVALAVELGLSLKGITGAKHET
Ga0209632_101337952	3300025886	Pelagic Marine	MNKRFKPQYLPYNDDAHALVEALAVELGLTLKNSAGHT
Ga0209631_101129502	3300025890	Pelagic Marine	KRFKPQYLPYNDDAHALVEALAVELGLSLKGITGAKHKTILSSFLY
Ga0209630_101480173	3300025892	Pelagic Marine	MNKRLKPLYLPYNNDAHALVEALAVELGLSLKGITGAKHKTI
Ga0209630_104492452	3300025892	Pelagic Marine	MNKRFKPQYLPYNDDAHALIEALAAELGLSLKGITGAKHKTILASFLY
Ga0209425_102503112	3300025897	Pelagic Marine	MNKRFKPQYLPHNDDAHALVEALAVELGLTLKGITGA
Ga0208671_101291232	3300027757	Estuarine	MNKRFKPQYLPHNDDAEALVESLAAELQLTLKDKTGAKHRTILSSFLYCVQ
Ga0209502_102693581	3300027780	Marine	MNKRFKPQYLPYNYDARALVQTLAAELGLTLKGKTGAKHNAIL
Ga0209712_104240643	3300027849	Marine	MNKRFKPQYLPYNYDARALVQTLAAELGLKLKGKTGAKHNAIL
Ga0209713_102555131	3300027883	Marine	MIKRFKPQYLPYNDDAHSMVEALAVELELTLKNSTGEKHK
Ga0228609_10604622	3300028133	Seawater	MNKRFKPQYLPYNNDAHALVEALAVELGLSLKGITGGKHKTILASFL
Ga0257126_11745011	3300028287	Marine	MNKRFKPQYLPYNHDAHALVEALAAELGLLLKGITGAKHKTILASFLYCVQEAGV
Ga0302126_102848702	3300031622	Marine	MNKRFKPQYLPYNDAAHAMVETLAAELGLTLNAATGAKHKTILASFLYCVQE
Ga0302125_101762951	3300031638	Marine	MNRRFKPQYLPHNDDAHALVEALAAELGLTLNAATGAKHRAILSSFLYCVQEA
Ga0307997_100177752	3300031706	Marine	MNKRFKPQYLPHNDDAHALVEALAMELGLILKGITGAKHETILASFLY
Ga0307997_100634681	3300031706	Marine	MTKRFKPQYLPYNDTAHAVVETLAAKLSLTLNAAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters