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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F055515 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 138 |
| Average Sequence Length | 98 residues |
| Representative Sequence | FATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGAPNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Number of Associated Samples | 130 |
| Number of Associated Scaffolds | 138 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.72 % |
| % of genes near scaffold ends (potentially truncated) | 99.28 % |
| % of genes from short scaffolds (< 2000 bps) | 88.41 % |
| Associated GOLD sequencing projects | 121 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (79.710 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.870 % of family members) |
| Environment Ontology (ENVO) | Unclassified (32.609 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (39.855 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 57.58% Coil/Unstructured: 42.42% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 138 Family Scaffolds |
|---|---|---|
| PF08546 | ApbA_C | 84.06 |
| PF00496 | SBP_bac_5 | 6.52 |
| PF01425 | Amidase | 2.17 |
| PF12911 | OppC_N | 0.72 |
| PF10103 | Zincin_2 | 0.72 |
| COG ID | Name | Functional Category | % Frequency in 138 Family Scaffolds |
|---|---|---|---|
| COG1893 | Ketopantoate reductase | Coenzyme transport and metabolism [H] | 84.06 |
| COG0154 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase | Translation, ribosomal structure and biogenesis [J] | 2.17 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 79.71 % |
| All Organisms | root | All Organisms | 20.29 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 10.87% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.14% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.70% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.52% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.07% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.07% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 4.35% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.90% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.90% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.90% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.90% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.17% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.17% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.17% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.17% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 1.45% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.45% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.45% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.45% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 1.45% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.45% |
| Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 1.45% |
| Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 1.45% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.45% |
| Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.45% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.45% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.45% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.45% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.72% |
| Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.72% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.72% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.72% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.72% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.72% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.72% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.72% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.72% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.72% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.72% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.72% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.72% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.72% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Host-Associated | Open in IMG/M |
| 3300002121 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 | Environmental | Open in IMG/M |
| 3300003503 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM | Host-Associated | Open in IMG/M |
| 3300004052 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 | Environmental | Open in IMG/M |
| 3300004145 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005880 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009171 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
| 3300009821 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300011410 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2 | Environmental | Open in IMG/M |
| 3300011444 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2 | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014262 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1 | Environmental | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015259 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D | Environmental | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
| 3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
| 3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
| 3300018059 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex | Environmental | Open in IMG/M |
| 3300018071 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1 | Environmental | Open in IMG/M |
| 3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
| 3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
| 3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
| 3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
| 3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
| 3300020004 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2 | Environmental | Open in IMG/M |
| 3300020022 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2 | Environmental | Open in IMG/M |
| 3300021073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo | Environmental | Open in IMG/M |
| 3300021081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022694 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex | Environmental | Open in IMG/M |
| 3300025165 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1 | Environmental | Open in IMG/M |
| 3300025324 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025580 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025959 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026001 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes) | Environmental | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
| 3300026345 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A | Environmental | Open in IMG/M |
| 3300026469 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B | Environmental | Open in IMG/M |
| 3300026507 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B | Environmental | Open in IMG/M |
| 3300026514 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B | Environmental | Open in IMG/M |
| 3300026535 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027326 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027614 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027695 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
| 3300027815 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes) | Environmental | Open in IMG/M |
| 3300027875 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300027954 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes) | Environmental | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
| 3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
| 3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
| 3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030336 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1 | Environmental | Open in IMG/M |
| 3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
| 3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
| 3300031228 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300033417 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155 | Environmental | Open in IMG/M |
| 3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300033814 | Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17 | Environmental | Open in IMG/M |
| 3300034178 | Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17 | Environmental | Open in IMG/M |
| 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI24743J22301_101264442 | 3300001991 | Corn, Switchgrass And Miscanthus Rhizosphere | AFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| C687J26615_101657201 | 3300002121 | Soil | GKWSYPVPPTASRGVRTEYGAPNTLAVELRERSIVAYVNGRPVATAELPAEASGTLGLYVDQRGMEVLFSNLRVSELPPIR* |
| JGI26141J51220_10041222 | 3300003503 | Arabidopsis Thaliana Rhizosphere | TYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0055490_101083592 | 3300004052 | Natural And Restored Wetlands | AFGLMFAGRGGRAADRTFATFGLTANGTYRMASWSGKWTYPVPPTATRSVKTEYGALNTLAVELRDRSVVAYVNGRPVATAELGAEAAGTLGFYVDQRGMEVVFSQLRVIELAPMR* |
| Ga0055489_102310361 | 3300004145 | Natural And Restored Wetlands | VASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRARSIVAYVNGRPVATAELSTEATGTLGLYVDQRGMEVLFNNLRVSELPPIR* |
| Ga0062594_1031327891 | 3300005093 | Soil | RTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070676_108113761 | 3300005328 | Miscanthus Rhizosphere | KGTREGAFGLMFASRGAAADRTFATLGLTANGTYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL |
| Ga0066388_1039591312 | 3300005332 | Tropical Forest Soil | LMFGSRGSADGRTFSTLGLTANGTYRVASWNGKWLYPVPPTASRSVKTDYGAQNTLAVEVRDRSVVAFVNGRPVATAELGVEAAGTLGLYVDQRGMEVLFTNVRVTELSPMR* |
| Ga0068868_1001233061 | 3300005338 | Miscanthus Rhizosphere | EGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0070691_103895852 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | RVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0070694_1000152967 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | WVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0070694_1006900692 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | LTANGTYRVASWAGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070694_1008118531 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | AFGLMFASRGGADNRTFATFGLTANGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR* |
| Ga0070708_1002940112 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070706_1016342111 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070707_1001574923 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | ATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTETSGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070707_1020130951 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | GTREGAFGLMFASRGGGDHRTFATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR* |
| Ga0070699_1000667151 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | RTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTETSGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070697_1005668521 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | VPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTETSGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0070697_1011139631 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | RTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0070672_1009943631 | 3300005543 | Miscanthus Rhizosphere | PVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0070696_1001949321 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | GEGRTFATLGLTANGTYRVASWAGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSHLRVVELLPLR* |
| Ga0070693_1001019841 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | WNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR* |
| Ga0066692_105444251 | 3300005555 | Soil | RKGTREGAFGLMFASRGAGEGRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGAPNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0075298_10029362 | 3300005880 | Rice Paddy Soil | LRKGSREGAFGLMFAGRGGPGGRVFATLGLTANGTYRVASWTGKWAYPVPPTATRTVKTEYGALNTLAVEVRERSVVAYVNGRPVATAELGTEAAGTVGLYVDQRGMEVVFSNLRVVELLPLR* |
| Ga0070766_107560281 | 3300005921 | Soil | FGLMFGSRGAADGRTFATFGLTANGTYRVAHWTGKWSYPVPPTASRSVKSDYGAVNHLAVEVRDKSIVAYVNGRPVATAELPADGAGTVGLFVDQRGMEVVFSNLRVVELVPMR* |
| Ga0075421_1008382501 | 3300006845 | Populus Rhizosphere | VRIEITARLRKGTREGAFGLMFGSRGGADNRTFATLGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTMAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR* |
| Ga0075433_100719263 | 3300006852 | Populus Rhizosphere | REGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0068865_1009909062 | 3300006881 | Miscanthus Rhizosphere | YRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR* |
| Ga0075426_108920811 | 3300006903 | Populus Rhizosphere | RTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELSPLR* |
| Ga0099830_116533661 | 3300009088 | Vadose Zone Soil | TYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0075423_127994271 | 3300009162 | Populus Rhizosphere | REGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFAQLRVVELAPLR* |
| Ga0105100_104945611 | 3300009166 | Freshwater Sediment | ANGTYRVASWTGKWAYPVPPTATRSVKTEYGTLNTLAVELREKSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR* |
| Ga0105101_104552872 | 3300009171 | Freshwater Sediment | FATFGLTANGTYRVASWTGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFSNLRVSALPPIR* |
| Ga0105064_10838691 | 3300009821 | Groundwater Sand | DNRTFATFGLTGNGTYRVASWSGKWSYPVPPTATRSIKTEYGALNTLAVELRDKSIVAYVNGRPVATAELAAEASGTLGFYVDQRGMEVVFSHLRVSELAPMR* |
| Ga0134126_104580052 | 3300010396 | Terrestrial Soil | KWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAEPASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0134124_112369621 | 3300010397 | Terrestrial Soil | GTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137440_10978222 | 3300011410 | Soil | ATFGLTANGTYRVASWSGGKWSYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSDLPPIR* |
| Ga0137463_12659582 | 3300011444 | Soil | PTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR* |
| Ga0137399_101660911 | 3300012203 | Vadose Zone Soil | ATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137362_115951692 | 3300012205 | Vadose Zone Soil | RVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR* |
| Ga0137362_115989512 | 3300012205 | Vadose Zone Soil | RVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPSEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137361_110295742 | 3300012362 | Vadose Zone Soil | LMFASRGAGEGRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPSEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137390_112384662 | 3300012363 | Vadose Zone Soil | GGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAVEASGTLGLYVDQRGMEVLFSNLRVSELPPIR* |
| Ga0137395_106571431 | 3300012917 | Vadose Zone Soil | YPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137359_101505673 | 3300012923 | Vadose Zone Soil | LTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPSEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137416_102734411 | 3300012927 | Vadose Zone Soil | ASRGAGEGRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR* |
| Ga0137416_106850222 | 3300012927 | Vadose Zone Soil | ASWSGGKWNYPVPPTATRSAKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR* |
| Ga0164305_103400432 | 3300012989 | Soil | AWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFAQLRVVELAPLR* |
| Ga0157371_104767722 | 3300013102 | Corn Rhizosphere | LMFASRGAAADRTFATLGLTANGTYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0157372_119416032 | 3300013307 | Corn Rhizosphere | LGLTANGTYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0075301_11679932 | 3300014262 | Natural And Restored Wetlands | GTYRVASWSGGKWTYPVPPTATRSVKTEYGAPNTLAVELRDRSVVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR* |
| Ga0157379_114281411 | 3300014968 | Switchgrass Rhizosphere | NRTFATFGLTANGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR* |
| Ga0173483_105698182 | 3300015077 | Soil | LMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR* |
| Ga0173480_111524671 | 3300015200 | Soil | TATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL* |
| Ga0180085_10778882 | 3300015259 | Soil | GLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQQGMEVLFTNLRVSELPPIR* |
| Ga0132255_1029342202 | 3300015374 | Arabidopsis Rhizosphere | LGLTANGTYRVASWTGKWAYPVPPTATRTVKTEYGALNTLAVELREKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELPPLR* |
| Ga0187821_100568372 | 3300017936 | Freshwater Sediment | AFGLMFASRGSAEARTFATLGLTANGTYRVASWAGKWAYPVPPTATRSVKTEYGALNTLAVELREKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| Ga0184610_10093173 | 3300017997 | Groundwater Sediment | AFATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0184608_101178741 | 3300018028 | Groundwater Sediment | IEVTARLRKGTREGAFGLMFASRGGADNRTFATFGLTANGTYRVASWIGGKWDYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNFRVSELPPIR |
| Ga0184615_100434831 | 3300018059 | Groundwater Sediment | RVASWSGGKWSYPVPPTVSRSVKTEYGAPNAMAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR |
| Ga0184618_100469701 | 3300018071 | Groundwater Sediment | GTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0184640_104376491 | 3300018074 | Groundwater Sediment | NGTYRIASWNGKWSYPVPWTPSRSVKTEYGVPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0184627_100187832 | 3300018079 | Groundwater Sediment | MFASRGGADNRTFATFGLTANGTYRVASWSGGKWDYPVPPTATRSVKTEYGAQNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0184629_102244862 | 3300018084 | Groundwater Sediment | GLMFASRGGADNRAFATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0190272_122814832 | 3300018429 | Soil | VRIEVTARLRKGTREGAFGLMFASRGGGDNRTFATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0193723_10321723 | 3300019879 | Soil | LTANGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFSNLRVSELPPVR |
| Ga0193755_11697792 | 3300020004 | Soil | SWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0193733_10453831 | 3300020022 | Soil | GKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0210378_100081975 | 3300021073 | Groundwater Sediment | YPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0210379_103100832 | 3300021081 | Groundwater Sediment | ATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0210404_103147902 | 3300021088 | Soil | RGGAENRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| Ga0210400_101296021 | 3300021170 | Soil | ASRGAAENRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| Ga0210389_108519192 | 3300021404 | Soil | PITATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| Ga0210394_117833301 | 3300021420 | Soil | TANGTYRVAHWTGKWSYPVPPTASRSVKSDYGAVNHLAVEVRDKSIVAYVNGRPVATAELPADGAGTVGLFVDQRGMEVVFSNLRVVELVPMR |
| Ga0222625_10940651 | 3300022195 | Groundwater Sediment | SRGGGDNRTFATFGLTANGTYRVASWSGGKWNYTVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0222623_103237812 | 3300022694 | Groundwater Sediment | PPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0209108_101665411 | 3300025165 | Soil | GGKWSYPVPPTASRGVKTEYGAPNTLAVELRERSIVAYVNGRPVATAELPAEASGTLGLYVDQRGMEVLFSNLRVSELPPIR |
| Ga0209640_108238741 | 3300025324 | Soil | FGLMFAGRGPVDNRTFATFGLTGNGTYRVASWSGKWSYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELAAEAAGTLGFYVDQRGMEVVFSNLRVSELAPMR |
| Ga0210138_10045681 | 3300025580 | Natural And Restored Wetlands | ASRGGGDNRTFATVGLTANGTYRVASWSGGKWTYPVPPTATRSVKTEYGAPNTLAVELRDRSVVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR |
| Ga0207642_103054271 | 3300025899 | Miscanthus Rhizosphere | NYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0207645_112407551 | 3300025907 | Miscanthus Rhizosphere | KGTREGAFGLMFASRGAAADRTFATLGLTANGTYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSQLRVVELLPL |
| Ga0207684_108529501 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | IEVSARQRKGTREGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFAQLRVVELAPLR |
| Ga0207646_116429171 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | ATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTETSGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0207686_108892471 | 3300025934 | Miscanthus Rhizosphere | ATFGLTANGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0207709_103978942 | 3300025935 | Miscanthus Rhizosphere | RKGTREGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0207704_103946512 | 3300025938 | Miscanthus Rhizosphere | RGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0207704_108193701 | 3300025938 | Miscanthus Rhizosphere | TARLRKGTREGAFGLMFASRGGADNRTFATFGLTANGTYRVASWIGGKWNYPAPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0207691_106180691 | 3300025940 | Miscanthus Rhizosphere | RVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0210116_10964351 | 3300025959 | Natural And Restored Wetlands | VASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRARSIVAYVNGRPVATAELSTEATGTLGLYVDQRGMEVLFNNLRVSELPPIR |
| Ga0207712_100950723 | 3300025961 | Switchgrass Rhizosphere | GTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0208000_1008211 | 3300026001 | Rice Paddy Soil | LTANGTYRVASWTGKWAYPVPPTATRTVKTEYGALNTLAVEARERSVVAYVNGRPVATAELGTEAAGTVGLYVDQRGMEVVFSNLRVVELLPLR |
| Ga0207677_102795601 | 3300026023 | Miscanthus Rhizosphere | AFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0207648_101184981 | 3300026089 | Miscanthus Rhizosphere | ASRGGADNRTFATFGLTANGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0209438_12241131 | 3300026285 | Grasslands Soil | KWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0209158_12614951 | 3300026333 | Soil | FATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGAPNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0257148_10189551 | 3300026345 | Soil | FGLMFASRGAGEGRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0257169_10509852 | 3300026469 | Soil | TYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0257165_10294771 | 3300026507 | Soil | YRVASWSGGKWNYPVPPTATRSVKTEFGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0257168_10778021 | 3300026514 | Soil | GLMFASRGAAEGRTFATLGLTANGTYRVASWTGKWTYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0256867_100590552 | 3300026535 | Soil | GRGGPDNRTFATFALTANGTYRVASWSSGKWSYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELSAQASGTLGFYVDQRGMEVLFTNLRVSALPPIR |
| Ga0179587_110442822 | 3300026557 | Vadose Zone Soil | GAFGLMFASRGAAENRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0209731_10693932 | 3300027326 | Forest Soil | ARQRKGTREGAFGLMFASRGAAENRTFATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0209970_10070994 | 3300027614 | Arabidopsis Thaliana Rhizosphere | KWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL |
| Ga0210002_10082723 | 3300027617 | Arabidopsis Thaliana Rhizosphere | ANGTYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL |
| Ga0209966_11401131 | 3300027695 | Arabidopsis Thaliana Rhizosphere | ESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0209073_102180521 | 3300027765 | Agricultural Soil | GSAESRTFATLGLTANGTYRVAAWNGKWAYPVPPTATRSVKTEYGAVNHLAVETRERSVVAYVNGRPVATAELPGEAAGTLGFYVDQRGMEVLFSQLRVVQLAPLR |
| Ga0209074_104100091 | 3300027787 | Agricultural Soil | LTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELSPLR |
| Ga0209726_101673201 | 3300027815 | Groundwater | ASRGGADNRTFATFGLTANGTYRVASWSGGKWSYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0209283_101436443 | 3300027875 | Vadose Zone Soil | ASRGGADNRAFATFGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTVAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0209380_104654722 | 3300027889 | Soil | KGTREGAFGLMFGSRGAADGRTFATFGLTANGTYRVAHWTGKWSYPVPPTASRSVKSDYGAVNHLAVEVRDKSIVAYVNGRPVATAELPADGAGTVGLFVDQRGMEVVFSNLRVVELVPM |
| Ga0209859_10679331 | 3300027954 | Groundwater Sand | TLGLTANGTYRVASWSGKWSYPVPPTATRSIKTEYGALNTLAVELRDKSIVAYVNGRPVATAELAAEASGTLGFYVDQRGMEVVFSNLRVSELAPMR |
| Ga0247828_108434581 | 3300028587 | Soil | VSARQRKGTREGAFGLMFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFAQLRVVELAPLR |
| Ga0307319_103086242 | 3300028722 | Soil | LTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0307282_106685541 | 3300028784 | Soil | TGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0307504_101176011 | 3300028792 | Soil | KWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0247824_109241922 | 3300028809 | Soil | TRLFSRSSTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0307302_102239552 | 3300028814 | Soil | WNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0307312_107190512 | 3300028828 | Soil | SWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0307312_111875921 | 3300028828 | Soil | RGGADNRTFATLGLTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELATEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0308309_101518701 | 3300028906 | Soil | HLPVQCATREGAFGLMFGSRGAADGRTFATFGLTANGTYRVAHWTGKWSYPVPPTASRSVKSDYGAVNHLAVEVRDKSIVAYVNGRPVATAELPADGAGTVGLFVDQRGMEVVFSNLRVVELVPMR |
| Ga0222749_100230161 | 3300029636 | Soil | PTATRSVRTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| Ga0247826_100934711 | 3300030336 | Soil | AHFPLHAATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| (restricted) Ga0255311_10611181 | 3300031150 | Sandy Soil | LTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVIELLPLR |
| (restricted) Ga0255310_101843141 | 3300031197 | Sandy Soil | FATLGLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELREKSIVAYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSNLRVVELAPLR |
| Ga0299914_108555661 | 3300031228 | Soil | DNRTFATFALTANGTYRVASWSSGKWSYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELSAQASGTLGFYVDQRGMEVLFTNLRVSALPPIR |
| Ga0307469_118147112 | 3300031720 | Hardwood Forest Soil | RVAAWSGGKWNYPVPPTASRSVRTEYGAPNTLGVELRDRSIVAYVNGRPVATAELAEQASGTLGLYVDQRGMEVLFTNLRVSDLAPLR |
| Ga0310884_107264582 | 3300031944 | Soil | DARTFATLGLTANGTYRVASWTGKWTYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLGLYVDQRGMEVVFSQLRVVELLPLR |
| Ga0307479_105215072 | 3300031962 | Hardwood Forest Soil | GKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLGLYVDQRGMEVVFSQLRVVELLPLR |
| Ga0310890_102400151 | 3300032075 | Soil | MFASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
| Ga0307471_1031541261 | 3300032180 | Hardwood Forest Soil | GLTANGTYRVASWTGKWAYPVPPTATRSVKTEYGALNTLAVELRDKSIVSYVNGRPVATAELPTEASGTLALYVDQRGMEVVFSQLRVVELLPLR |
| Ga0214471_100740161 | 3300033417 | Soil | ASWSGGKWSYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEASGTLGLYVDQRGMEVLFTNLRVSALPPIR |
| Ga0316624_116572501 | 3300033486 | Soil | GPDARTFATLGLTANGTYRVASWTGKWTYPVPPTATRSVKTEYGALNTLAVELREKSIVAYVNGRPVATAELPTEASGTLGLYVDQRGMEVVFSNLRVVELAPLR |
| Ga0316628_1013774672 | 3300033513 | Soil | GLMFASRGGPDARTFATLGLTANGTYRVASWTGKWTYPVPPTATRSVKTEYGALNTLAVELRDKSIVAYVNGRPVATAELPTEASGTLGLYVDQRGMEVVFSQLRVVELLPLR |
| Ga0247829_104390032 | 3300033550 | Soil | NGTYRVASWIGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELAAEAGGTLGLYVDQRGMEVLFTNLRVSELPPSR |
| Ga0364930_0208954_2_256 | 3300033814 | Sediment | SWSGKWSYPVPPTATRSVKTEYGALNALAVELRDKSIVAYVNGRPVATAELAAEASGTLGFYVDQRGMEVVFSHLRVSELAPMR |
| Ga0364934_0256286_3_332 | 3300034178 | Sediment | SRGGGDNRTFATFALTANGTYRVASWSGGKWNYPVPPTATRSVKTEYGAPNTLAVELRDRSIVAYVNGRPVATAELSAEASGTLGLYVDQRGMEVLFTNLRVSELPPIR |
| Ga0373958_0022948_837_1169 | 3300034819 | Rhizosphere Soil | FASRGSAESRTFATLGLTANGTYRVAAWSGKWAYPVPPTATRSVKTEYGAVNHLAVELREKSLVAYVNGRPVATAELASDAAGTLGLYVDQRGMEVLFTQLRVVELAPLR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |