Metagenome / Metatranscriptome Family F055506

Basic Information
Family ID	F055506
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	79 residues
Representative Sequence	VSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGANA
Number of Associated Samples	115
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.97 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	94.20 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (99.275 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.116 % of family members)
Environment Ontology (ENVO)	Unclassified (42.754 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.348 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.55% β-sheet: 19.09% Coil/Unstructured: 56.36%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF07586	HXXSHH	51.45
PF07624	PSD2	1.45
PF07637	PSD5	0.72
PF07631	PSD4	0.72
PF07627	PSCyt3	0.72
PF00753	Lactamase_B	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	28.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	28.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	28.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	28.99 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	28.99 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.72 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11771865	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300001977\|JGI24746J21847_1036235	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300002070\|JGI24750J21931_1096694	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	504	Open in IMG/M
3300005169\|Ga0066810_10087482	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005294\|Ga0065705_10824789	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005331\|Ga0070670_102187485	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005338\|Ga0068868_100377239	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300005340\|Ga0070689_100518060	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005343\|Ga0070687_100273104	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005347\|Ga0070668_100723039	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005353\|Ga0070669_100387037	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005354\|Ga0070675_100680068	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005354\|Ga0070675_100826334	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005355\|Ga0070671_101409865	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	616	Open in IMG/M
3300005356\|Ga0070674_100509594	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300005365\|Ga0070688_100314078	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005441\|Ga0070700_101473907	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	578	Open in IMG/M
3300005444\|Ga0070694_100595670	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300005456\|Ga0070678_100414072	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300005459\|Ga0068867_100425776	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005459\|Ga0068867_101618533	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005466\|Ga0070685_10090234	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300005543\|Ga0070672_102145508	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	504	Open in IMG/M
3300005549\|Ga0070704_101061703	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005564\|Ga0070664_100726040	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005617\|Ga0068859_101583127	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005618\|Ga0068864_100999611	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005712\|Ga0070764_10431605	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005842\|Ga0068858_100115811	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300005843\|Ga0068860_100400579	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300006032\|Ga0066696_11093001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	507	Open in IMG/M
3300006847\|Ga0075431_101416017	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006918\|Ga0079216_11062012	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009094\|Ga0111539_10821537	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300009101\|Ga0105247_10843513	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300009156\|Ga0111538_10156613	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300009156\|Ga0111538_11374877	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	891	Open in IMG/M
3300009176\|Ga0105242_11156787	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009553\|Ga0105249_11903815	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009553\|Ga0105249_12119657	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300009610\|Ga0105340_1135746	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010399\|Ga0134127_10528668	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300010399\|Ga0134127_13027856	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010401\|Ga0134121_12451938	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300011119\|Ga0105246_10802181	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300011417\|Ga0137326_1091662	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	690	Open in IMG/M
3300011435\|Ga0137426_1101404	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300011440\|Ga0137433_1043577	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012469\|Ga0150984_122553554	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012519\|Ga0157352_1038810	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012884\|Ga0157300_1070008	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012895\|Ga0157309_10072867	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012895\|Ga0157309_10137606	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012898\|Ga0157293_10077567	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012898\|Ga0157293_10130015	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012901\|Ga0157288_10353706	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	533	Open in IMG/M
3300012904\|Ga0157282_10127237	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	749	Open in IMG/M
3300012905\|Ga0157296_10210737	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012907\|Ga0157283_10069978	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012909\|Ga0157290_10167390	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012909\|Ga0157290_10376299	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	547	Open in IMG/M
3300012914\|Ga0157297_10081055	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300012960\|Ga0164301_10797498	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300013102\|Ga0157371_10374826	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300013306\|Ga0163162_13289793	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300013308\|Ga0157375_10945206	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300014745\|Ga0157377_11221637	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	583	Open in IMG/M
3300014968\|Ga0157379_12286283	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	538	Open in IMG/M
3300015200\|Ga0173480_10038434	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300015201\|Ga0173478_10144797	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300015373\|Ga0132257_101508783	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300015373\|Ga0132257_103272361	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300015373\|Ga0132257_103800852	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300016404\|Ga0182037_11996352	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	521	Open in IMG/M
3300017792\|Ga0163161_10950524	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300017792\|Ga0163161_11569738	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300018429\|Ga0190272_12540723	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	559	Open in IMG/M
3300018432\|Ga0190275_10812625	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300018476\|Ga0190274_13220389	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	549	Open in IMG/M
3300018481\|Ga0190271_10073579	All Organisms → cellular organisms → Bacteria	3029	Open in IMG/M
3300018481\|Ga0190271_11558917	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300019377\|Ga0190264_11094469	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300019377\|Ga0190264_11210633	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021080\|Ga0210382_10230555	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300021081\|Ga0210379_10278701	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300022903\|Ga0247774_1066625	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	850	Open in IMG/M
3300023057\|Ga0247797_1007941	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300023072\|Ga0247799_1046547	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	714	Open in IMG/M
3300025321\|Ga0207656_10749498	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025893\|Ga0207682_10459787	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300025899\|Ga0207642_10440399	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300025907\|Ga0207645_10003078	All Organisms → cellular organisms → Bacteria	12798	Open in IMG/M
3300025923\|Ga0207681_10442317	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300025925\|Ga0207650_10606182	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	921	Open in IMG/M
3300025925\|Ga0207650_11846040	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	511	Open in IMG/M
3300025930\|Ga0207701_10497370	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300025931\|Ga0207644_10930969	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	729	Open in IMG/M
3300025935\|Ga0207709_10330383	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1144	Open in IMG/M
3300025937\|Ga0207669_10373025	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300025937\|Ga0207669_10691819	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300025941\|Ga0207711_10733130	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300025961\|Ga0207712_10647506	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	918	Open in IMG/M
3300026041\|Ga0207639_10432921	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300026041\|Ga0207639_12166226	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026088\|Ga0207641_12202712	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	551	Open in IMG/M
3300026121\|Ga0207683_10504921	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1117	Open in IMG/M
3300026121\|Ga0207683_12070827	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300027462\|Ga0210000_1022354	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	970	Open in IMG/M
3300027886\|Ga0209486_10033798	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2480	Open in IMG/M
3300027886\|Ga0209486_10492399	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	760	Open in IMG/M
3300027886\|Ga0209486_10928727	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	579	Open in IMG/M
3300028597\|Ga0247820_10804750	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	661	Open in IMG/M
3300028608\|Ga0247819_10526827	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	702	Open in IMG/M
3300028608\|Ga0247819_10623315	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300028812\|Ga0247825_10017900	All Organisms → cellular organisms → Bacteria	4633	Open in IMG/M
3300031198\|Ga0307500_10155206	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031226\|Ga0307497_10593261	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031421\|Ga0308194_10033234	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031547\|Ga0310887_10082669	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1544	Open in IMG/M
3300031547\|Ga0310887_10795581	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	593	Open in IMG/M
3300031548\|Ga0307408_101006661	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	768	Open in IMG/M
3300031562\|Ga0310886_10287131	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031562\|Ga0310886_10346191	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	862	Open in IMG/M
3300031562\|Ga0310886_10520439	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300031731\|Ga0307405_11554796	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031847\|Ga0310907_10125817	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1144	Open in IMG/M
3300031913\|Ga0310891_10016148	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300032000\|Ga0310903_10116784	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300032003\|Ga0310897_10214786	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	845	Open in IMG/M
3300032012\|Ga0310902_10882698	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032013\|Ga0310906_10748285	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	686	Open in IMG/M
3300032179\|Ga0310889_10532094	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	599	Open in IMG/M
3300032211\|Ga0310896_10650528	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300034149\|Ga0364929_0073456	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1058	Open in IMG/M
3300034660\|Ga0314781_074980	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	645	Open in IMG/M
3300034665\|Ga0314787_080665	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	579	Open in IMG/M
3300034817\|Ga0373948_0081737	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	738	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.80%
Host-Associated	Host-Associated	44.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.72%
Plants	Host-Associated → Plants	44.20%
Aquatic	Environmental → Aquatic	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.39%
Sediment	Environmental → Aquatic → Sediment	2.90%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Loam	Environmental → Terrestrial → Soil → Loam	5.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_117718651	3300000890	Soil	MAVSLNRRDVLKGALGVFATWTTSRVLCAQQAFGGVSRLTDQMTVVDGGGSNVLAFFTGEGVVLVDGGAPKSFDTIMASLGANAKVNTLFNT
JGI24746J21847_10362351	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	MAVRLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAP
JGI24750J21931_10966941	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MAVRLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTIMASLGANAKVNTLIN
Ga0066810_100874822	3300005169	Soil	MAVSLNRRDVLKGALGVFATWTSSRALSAQQASGGVRRLTDQITVVDGGGSNVLAFFTGEGFVLVDGGAPKSFEKVMASLDANAKV
Ga0065705_108247891	3300005294	Switchgrass Rhizosphere	VLTVLNRRDVLKGALGAFASWTSARVLGAQPAAGGVRRLTDRMTVVDGGGSNVLAFFTGDGFLLVDGGAPKSFDRIM
Ga0070670_1021874852	3300005331	Switchgrass Rhizosphere	MGEGGHGVNRRDVLKGAFGAFTMWTCSRLVTAQQASGAVRRLTDNMTVVDGGGSNVLAWSTNDGLVLVDGGAPKSFDKVML
Ga0068868_1003772391	3300005338	Miscanthus Rhizosphere	MAVSLNRRDVLKGALGVCAMWTSSRVLSAQQVFGGVRRLTDQITVVDGGGSNVLAFFTGEGVVLV
Ga0070689_1005180601	3300005340	Switchgrass Rhizosphere	MTILNRRDVLKGALGAFASWTSTPVLGAQQAFGGVRRLTDPMTVVDGGGSNVLAFFTGDGFVLVDGGAP
Ga0070687_1002731041	3300005343	Switchgrass Rhizosphere	MAVSLNRRNVLKGALGVFATWASSRVLCAQQAFGGVRRLTEQMAVVDGGGSNVLAFSTGEGVVLVDGGAPKS
Ga0070668_1007230392	3300005347	Switchgrass Rhizosphere	VSLNRRDVLKGALGVLATWTSSRVLSAQQASGGVRLTDQMAVVDGAGSNILAFFAGEGFVLVDGGAPKSFDKVMASLGANAKV
Ga0070669_1003870371	3300005353	Switchgrass Rhizosphere	MAVSLNRRNVLKGALGVFATWASSRVLCAQQAFGGVRRLTDQMTVVDGGGSNVLAFFTGEGVVLVDGGAPKSFDTIMASLGANAK
Ga0070675_1006800682	3300005354	Miscanthus Rhizosphere	MAVSLNRRNVLKGALGVFATWASSGVLSAQQALGGVRRLTEQMAVVDGGGSNVLAFSTGEGVVLV
Ga0070675_1008263342	3300005354	Miscanthus Rhizosphere	VSLNRRDVLKGALGVIATWASSGILSAQQALGGVRRLTEQMAVVDGGGSNVLAFSTGEGVVLV
Ga0070671_1014098651	3300005355	Switchgrass Rhizosphere	VTALSLNRRDVLRSALGVFATLASSRVLCAQQAFGGGRRLTDQMAVVDGGGCNVLAFSTGDGFVLVDGGAPKSFDKVMVSLGASAKVNTLFNTHH
Ga0070674_1005095941	3300005356	Miscanthus Rhizosphere	VSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGANA
Ga0070688_1003140781	3300005365	Switchgrass Rhizosphere	VTAVSLNRREVLKGALGVFVTWTSSRVLGAQQAFGGGRRLTDQMVVVDGGGCNVLAFFTGDGFVLVDGGAPKSFD
Ga0070700_1014739072	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTIMASLGANAKVNTL
Ga0070694_1005956702	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VSLNRRDVLKGALGVFAAWASSRVLGAQLASVGVRRLTDQMRVADGGGSNVLTFFTGDGFVLVDGG
Ga0070678_1004140722	3300005456	Miscanthus Rhizosphere	VNRRELLKGALGVFATWASAGVLGAQPASGGVRRLTDKVMVVDGGGSNVLAFFTGEGFVLVDGG
Ga0068867_1004257761	3300005459	Miscanthus Rhizosphere	VSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGA
Ga0068867_1016185332	3300005459	Miscanthus Rhizosphere	MAVSLNRRDVLKGALGVFATWTSSGVLCAQQASGGVRRLTDQMTLVDGGGSNVLAFFTGEGSVLVDGGAPKSFD
Ga0070685_100902343	3300005466	Switchgrass Rhizosphere	MAVSLNRRNVLKGALGVFATWASSRVLCAQQAFGGVRRLTDQMTVVDGGGSNVLAFFTGEGVVLVDG
Ga0070672_1021455082	3300005543	Miscanthus Rhizosphere	MEVSLHRRDVLKGALGVFATWASSRVLSAQPAVGGVRRLTDQMAVVDGGGCNVLAFSTDDGFVLVDGGAPKSFDNVMASLGANARVNTLFN
Ga0070704_1010617031	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSLNRRDVLKGALGVFAAWASSRVLGAQLASVGVRRLTDQMRVADGGGSNVLTFFTGDGFVLVDGGAPKSFD
Ga0070664_1007260401	3300005564	Corn Rhizosphere	MTIMNRRDVLRGALGAFASWTSARVLSAQQAIGGGRRLTDRVTVVDGGGSNVLAFFPGDGFVLVDGGAPKSFDKIMASLGANAKV
Ga0068859_1015831271	3300005617	Switchgrass Rhizosphere	MAVSLHRRDVLKGALGVFATWASSRVLSAQQAVAGVRRLTDQIAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFD
Ga0068864_1009996112	3300005618	Switchgrass Rhizosphere	VSLNRRDVLKGALGVLATWTSSRVLSAQQASGGVRLTDQMAVVDGAGSNILAFFAGEGFVLVDGG
Ga0070764_104316052	3300005712	Soil	VITILNRRDVLKGALGACASWTSARVLCAQPAFGGVRRLTDRMTVVDGGGSNVLAFFTGDGFVLVDGGVPKSFDKIMASL
Ga0068858_1001158111	3300005842	Switchgrass Rhizosphere	MAVSLNRRDVLKVALGVFATWASSRVLSAQQGPSGVRRLTDRMVVVDGGGSNVLALFTGDGFVLVDGGAPKSFDTVMASLGMNAKVNTLFNTHYH
Ga0068860_1004005792	3300005843	Switchgrass Rhizosphere	MAVSLNRRDVLKVALGVFATWASSRVLSAQQGPSGVRRLTDRMVVVDGGGSNVLALFTGDGFVLVDGGAPKSF
Ga0066696_110930011	3300006032	Soil	VNRRDVLKGALGVFTMWTSSRVLNAQQASGGVRRLTDKMAVVDGGGSNVLACSTGEGLVLVDGGAPKSGDQVMAALK
Ga0075431_1014160171	3300006847	Populus Rhizosphere	MAVSLSRRDVLKGALGVFATWTSSRVLCAQQAIGGVRRLTDQMAVVDGGGSNVLAFFTGEGVVLVDGGAPKSFD
Ga0079216_110620121	3300006918	Agricultural Soil	MTVLNRRAVLKGALGAFASWTSARVLSAQPASGGARRLADRMTMVDGGGSNVLAFFTGDGFV
Ga0111539_108215372	3300009094	Populus Rhizosphere	MAVSLTRREVLRGALGVLATWTSSSVLSAQQAVSGVRRLTDRMVVVDGGGSNVLAFSTGEGFVLVDGGAPKSFDKV
Ga0105247_108435131	3300009101	Switchgrass Rhizosphere	MAMPLNRREVLKGAVGVFATWTSSRVLGAQQAFGGVRRLTDQITVVDGGGSNVLAFFTGEGFVLVDGGAPTSF
Ga0111538_101566131	3300009156	Populus Rhizosphere	MAVSLTRREVLRGALGVLATWTSSSVLSAQQAVSGVRRLTDRMVVVDGGGSNVLAFSTGEGFVLVDGGAPKSFDKVTASLGANA
Ga0111538_113748772	3300009156	Populus Rhizosphere	MAVSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGANARVNTLF
Ga0105242_111567872	3300009176	Miscanthus Rhizosphere	MAMSLNRRDVLKGALGVFAAWTSSRVLNAQQALGGVRRLTDQMTVVDGGGSNVLAFFSGDGFVLVDGGAPKSFDTIMASLGA
Ga0105249_119038151	3300009553	Switchgrass Rhizosphere	MTIMNRRDVLTGALGAFASWTSARVLSAQQASGGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDKIMASLGANAKVTTL
Ga0105249_121196571	3300009553	Switchgrass Rhizosphere	MAMPLNRRDVLKGALGVFATWTSSRVLSAQQASGGVRRLTDQITVVDGGGSNVLAFFTGEGLVLVD
Ga0105340_11357462	3300009610	Soil	MSVLNRRDVLKGALGVFATWTSSGILGAQSAFGGARRLTDQMAVVDGGGSNVVAFSTGEGFVLVDGGAPKSF
Ga0134127_105286681	3300010399	Terrestrial Soil	VALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGFVLVDGGAPKS
Ga0134127_130278561	3300010399	Terrestrial Soil	MTIMNRRDVLKGALGAFASWTSARVLSAQQTFGGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDRIMASLGANARV
Ga0134121_124519381	3300010401	Terrestrial Soil	MAMSLNRREMLKSAVGAFATWSSTRVLSAQQPSGGVRRLTDQITVVDGGGSNVLAFSTGEGFVL
Ga0105246_108021812	3300011119	Miscanthus Rhizosphere	MAVALNRRDVLRGALGVFAAVASSRALGAQQAVGAGRRLTDQMTMVDGGGSNVLAFSTGDGFVLVDGGAPKSFDTVM
Ga0137326_10916622	3300011417	Soil	MAVSLNRRDVLKGALGVFATWTSSRVLCAQQAFGGARRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDRIMASLGANATVNTLFNTHHHV
Ga0137426_11014042	3300011435	Soil	MAVSLNRRDVLKGALGVFATWASSRVLGAQSAFGGARRLTDQIAVVDGGGSNVLAFFTGEGVVLV
Ga0137433_10435771	3300011440	Soil	MTVLSRRDVLKGALGAFASWTSARVVSAQQAFGGVRRLTDQITVVDGGGSNVLAFFTGDGFVLVDSGPPKSFDK
Ga0150984_1225535542	3300012469	Avena Fatua Rhizosphere	MTVPNRRDVLKGALGAFAWWTSARVLSAQQAIGGVGRLTDQMTVVDGGGSNVLAFITGEGLVLVDGGAPKSFEKVMA
Ga0157352_10388101	3300012519	Unplanted Soil	MAVSLNRRDVLKGALGVFATWTSSRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGA
Ga0157300_10700082	3300012884	Soil	MAVSLNRRDVLKGALGVFATWTTSRVLCAQQAFGGVSRLTDQMTVVDGGGSNVLAFFTGEGVVLV
Ga0157309_100728671	3300012895	Soil	MAVSLNRRDVLKGALGVFAAWASSRVLGAQLASVGVRRLTEQMAVVDGGGSNVLAFSTGEGVVLVDGGAPKSFDTIMASLGAN
Ga0157309_101376061	3300012895	Soil	LTVMAGPLNRRDVLKGALGAFAVWTSSGVLSAQQASGGVRRLTDTIAVVDGGGSNVLAFSTGEGFVLVDGGAPKSF
Ga0157293_100775671	3300012898	Soil	MAVRLNRREVLKGALGLFATWASSRVLSGQPAFGGRRLTDQMAVVDGGGCNVLAFFTGDGFVLVDGGAPKSFDKVM
Ga0157293_101300152	3300012898	Soil	VPLNRRDLLKGALGAFATWASSGVLSAQQAFGGVRRLTDQMVVVDGGGSNVLAFSTGEGFLLVDGGA
Ga0157288_103537062	3300012901	Soil	MAVSLNRRDVLKGALGVFATWASSGVLSAQQPSGGVRRLTDQIAVVDGGGSNVLAFFTGDGFVLVDGGPPKSFDKVMASLG
Ga0157282_101272372	3300012904	Soil	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAMMASLGMNAKVNTLFNTH
Ga0157296_102107372	3300012905	Soil	LTVMAGPLNRRDVLTGALGAFAVWTSSGVLSAQPASGGVRRLTDTIAVVDGGGSNVLAFSTGEGFVLVDGGAP
Ga0157283_100699782	3300012907	Soil	VIAVSLNRRDVLKGACGVFATWTSSRVLSAQQAVGGIRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSF
Ga0157290_101673902	3300012909	Soil	MAVSLNRREVLKSALGVFATWASSGVLSAQQPSGGVRRLTDQIAVVDGGGSNVLAFFTGDGFVLVDGGPPKSFDKVMASLGTN
Ga0157290_103762991	3300012909	Soil	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGANAKVNTL
Ga0157297_100810552	3300012914	Soil	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSF
Ga0164301_107974981	3300012960	Soil	MAVSLNRRGVLKGALGAFAAWTSSGVLSAQRAAGGVRLTDQMALVDGGGSNVLAFLTGEGYVL
Ga0157371_103748262	3300013102	Corn Rhizosphere	MAVSLNRRDVLKGALGVFAAWASSRVLGAQLASVGVRRLTDQMRVADGGGSNVLTFFTGDGFVL
Ga0163162_132897932	3300013306	Switchgrass Rhizosphere	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGG
Ga0157375_109452062	3300013308	Miscanthus Rhizosphere	MAVSLNRRDVLKGALGAFAAWTSSGVLSAQRAAGGVRLTDQMALVDGGGSNVLAFLTGEGSVLVDGGAPKSFDKVMASLGANAKV
Ga0157377_112216372	3300014745	Miscanthus Rhizosphere	MAVSLNRRDVLKGALGAFAAWTSSGVLSAQRAAGGVRLTDQMALVDGGGSNVLAFLTGEGYVLVDGGAPKSFDKVMASLGANAKVHT
Ga0157379_122862832	3300014968	Switchgrass Rhizosphere	MAVSLNRRDVLKGALGVCAMWTSSRVLSAQQVFGGVRRLTDQITVVDGGGSNVLAFFTGEGVVLVDGGAPKSFDKIMASLGANAKVTTL
Ga0173480_100384341	3300015200	Soil	LTVMAGPLNRRDVLKGALGAFAVWTSSGVLSAQQASGGVRRLTDTIAVVDGGGSNVLAFSTGEGFVLVDGGAP
Ga0173478_101447971	3300015201	Soil	MAVSLNRRDVLKGALGVLATWTSSRVLSAQQASGGVRLTDQMAVVDGAGSNILAFFAGEGFVLVDGGAPKSFDKVM
Ga0132257_1015087831	3300015373	Arabidopsis Rhizosphere	MAVSLNRRDVLKGALGVFATWTSSRVLCAPQAFGGVGRLTDQMTVVDGGGSNVLAFFTGEGVVL
Ga0132257_1032723612	3300015373	Arabidopsis Rhizosphere	MAVSLNRRDVLKGALGVFATWTSSGVLCAQQPSGGVRRLTDQMTLVDGGGSNVLAFFTGEGSVLVDGGAPKSFDRVMASLGAN
Ga0132257_1038008522	3300015373	Arabidopsis Rhizosphere	VALNRREVLQGALGVFATWASSRVLSAQQASGGGRRLTGQMVVVDGGGSNVLAFSTGDGFVLVDGGAPKSFDTIMASL
Ga0182037_119963521	3300016404	Soil	VNRRDVLKSGLGAFTMWTSSRVLNAQQVSGGVRRLTDKMAVVDGGGSNVLACSTGEGLVLVDGGAPKSDDQVMAALKNLASGA
Ga0163161_109505242	3300017792	Switchgrass Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGFVLVDGGAPKSFDKVMASLGANARVH
Ga0163161_115697382	3300017792	Switchgrass Rhizosphere	MAVSLNRRDVLKGALGAFASWTSARVLGAQPAAGGVRRLTDRMTVVDGGGSNVLAFFTGDGFLLVDGGAPKSFDRIMASL
Ga0187817_102042832	3300017955	Freshwater Sediment	VKRRDLLKDAVGVFTIWTSSRVLTAQQPTAGVRRLTDKLAVVEGGGANVLACSTSEGFVLVDSGAPKSGDHVMAGL
Ga0190272_125407232	3300018429	Soil	MTVVNRRSVLKGALGTCAWWTSARVLSAQPAPGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDAGGPKSFDRIMASLGANARINTLFN
Ga0190275_108126252	3300018432	Soil	MTVLNRRDVLKGALGAFASWTSASVLSAQQASGGVRRLTDQMRVVDGGGSNVLAFFTGGGFVLVDSGAPTSFDSVMASLGANARVDTLF
Ga0190274_132203892	3300018476	Soil	MAVPLNRRDVLRGALGVFATWASSGVLSAQQPSGGVRRLTDQIAVVDGGGSNALAFFTGEGFVLVDGGAPKAFDTIMASLGMNAKVNTLFNT
Ga0190271_100735793	3300018481	Soil	MTVLNRRDVLRGALGAFASLASARVLSAQQAFGGVRRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTIMASLGANAKVNTLINTHHHVD
Ga0190271_115589171	3300018481	Soil	MAVPLNRRDVLKGALGVFATWASSDLLSAQQPSGGVRRLTDQIAVVDGGGSNVLAFFTGDGVVLVDGGP
Ga0190264_110944692	3300019377	Soil	MAVPMRRRDVLKGALGVFATWASSRALSAQPASGGVRRLTDQMVVVDGGGSNVLAFFTGEGVVLVDGGAPKSFDKVMASLGANAK
Ga0190264_112106331	3300019377	Soil	MTVLNRRDVLTGALGAFAWWTSARVLSAQQAVGGVAQLTDQLTVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDRIMASLGANARVHT
Ga0210382_102305551	3300021080	Groundwater Sediment	MTILNRRDVLKGALGAFASWTSARVLSAQQAFGGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVD
Ga0210379_102787012	3300021081	Groundwater Sediment	MAVSLNRRDVLKGALGVFATWASSGVLSAQQPFGGVRRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGVPQS
Ga0247774_10666251	3300022903	Plant Litter	MAGPLNRRDVLKGALGAFAVWTSSGVLSAQQASGGVRRLTDTIAVVDGGGSNVLAFSTGEGFVLVDGGAPKSFDRIVASLGANAKVHTL
Ga0247797_10079411	3300023057	Soil	MTVLNRRDVLKGGVGAFTLWTSAGVLAAQGAVRRLTDQMTLVDAGGSNVLAFSAGDGFVLVDSGAPKSFDRIM
Ga0247799_10465471	3300023072	Soil	MAVSLNRRDVLKGALGVFATWTSSRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTMMASLGANAKVN
Ga0207656_107494982	3300025321	Corn Rhizosphere	MTLHRRELLKGALGVLATWASSGVLSAQQTAGGVRRLTDQMLVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDTVMA
Ga0207682_104597872	3300025893	Miscanthus Rhizosphere	MAGSLNRRDVLKGALGVCATWASSRVLSGQPAFGGRRLTDQMAVVDGGGCNVLAFFTGDGFVLVDGGAPKSFDKVMASLGANAK
Ga0207642_104403991	3300025899	Miscanthus Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGLVLV
Ga0207645_1000307812	3300025907	Miscanthus Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGLVLVDGGAPKSFDKVMA
Ga0207681_104423171	3300025923	Switchgrass Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGFVLVDGGA
Ga0207650_106061821	3300025925	Switchgrass Rhizosphere	MAVSLNRRDVLKGALGVFAAWASSRVLGAQLASVGVRRLTDQMRVADGGGSNVLTFFTGDGFVLVDGGAPKSFDKVMASLGANATVNALFNTHHHVDQ
Ga0207650_118460402	3300025925	Switchgrass Rhizosphere	VNRRDVLKGAFGAFTMWTCSRLVTAQQASGAVRRLTDNMTVVDGGGSNVLAWSTNDGLVLVDGGAPKSFDKVMLALGANAKVKTL
Ga0207701_104973701	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAGSLNRRDVLKGALGVCATWASSRVLSGQPAFGGRRLTDQMAVVDGGGCNVLAFFTGDGFVLVDGGAPKSFDKVM
Ga0207644_109309692	3300025931	Switchgrass Rhizosphere	MAVALNRRDVLRGALGVFAAVASSRVLGAQQAVGAGRRLTDQMTMVDGGGSNVLAFSTGDGFVLVDGGAPKSFDTVMASLGVNARVNTL
Ga0207709_103303832	3300025935	Miscanthus Rhizosphere	MTILNRRDVLKGALGAFASWTSARVLSAQQTFGGVRRLTDRMTVVDGGGSNVLAFFTGDGFLLVDGGAPKSFDRIMASLGANARVHTLFNT
Ga0207669_103730252	3300025937	Miscanthus Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGLVLVDGGAPKS
Ga0207669_106918192	3300025937	Miscanthus Rhizosphere	MAVPLNRRDLLKGALGVVATWASSGVLSAQQASGGVRRLTDQMVVVDGGGSNVLAFSTGDGFVLVDGGAPKS
Ga0207711_107331301	3300025941	Switchgrass Rhizosphere	MPLNRRDVLKGALGVFATWTSSRVLSAQQASGGVRRLTDQITVVDGGGSNVLAFFTGEGLVLVDGGA
Ga0207712_106475062	3300025961	Switchgrass Rhizosphere	MTILNRRDLLKGALGAFASLTSARVLSAQQAFGGVRRLTDQMTVVDGGGSNVLAFFSGDGFVLVDGGAPKSFDKIMASLGANARVTTLFNT
Ga0207639_104329211	3300026041	Corn Rhizosphere	MAVSLNRRNVLKGALGVFATWASSGVLSAQQALGGVRRLTEQMAVVDGGGSNVLAFSTGEGVVLVDGGAPKSFDTIMASLGANARV
Ga0207639_121662261	3300026041	Corn Rhizosphere	VRAVALNRREVLQGALGVFATWACSRVLSAQQPFRGGGRLNDQMTVVDGGGSNVLAFSTGEGFVLVDGGAPKSFDKVMASLGAN
Ga0207641_122027122	3300026088	Switchgrass Rhizosphere	MTVALNRREVLKGALGVIAAWASPSTLSAQQVPVGVRRLTDQMVVVDGGGSNVLAFSTGDGFVLVDGGAPKSFDTVMASLGVNARVNTLFNTHHH
Ga0207683_105049211	3300026121	Miscanthus Rhizosphere	VNRRELLKGALGVFATWASAGVLGAQPASGGVRRLTDKVMVVDGGGSNVLAFFTGEGFVLVDGGAPTSFDTIMASLGANAEVQTLFNTHHHV
Ga0207683_120708271	3300026121	Miscanthus Rhizosphere	VSLNRRDVLKGALGVFATWTSSGVLCAQQASGGVRRLTDQMTLVDGGGSNVLAFFTGEGSVLVDGGAPK
Ga0210000_10223542	3300027462	Arabidopsis Thaliana Rhizosphere	VIAVSLNRRDVLKGALGVFATWTTSRVLGAQQAFGGVGRLTDQMTVVDGGGSNVLAFFTGEGVVLVDGGAPKAFDTIMTSLGANANVNTLF
Ga0209486_100337983	3300027886	Agricultural Soil	MSVPLHRRDVLKGALGVFAMWASSRLLSAQQAFGGARRLTDQMAVVDGGGGNVLAFSSGEGFVLVDGGAPKSFDTIVASLGANAKVTTLFNT
Ga0209486_104923991	3300027886	Agricultural Soil	VSLNRRDVLKGAVGACAAWMSAGVPGAQQASAGLRQGSVGQGGVRRLTDRMTVVDGGGSNVLAFAAGDGFVLVDSGAPKSFDKVMTSLPFDSAQDKGANARIHTV
Ga0209486_109287271	3300027886	Agricultural Soil	MTVLNRRDVLKGALGAFASWTSARVLSAQPAVGGVRRLTDRMTVVDGGGSNVLAFSTGDGFVLVDGGAPKSFDKVMASLGANARVNTLFNTHH
Ga0247820_108047502	3300028597	Soil	MAVSLNRRDVLKGALGVFATWASPRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGANASVNTLFN
Ga0247819_105268272	3300028608	Soil	MAVSLNRRDVLKGALGVFATWASPRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGANAKVN
Ga0247819_106233151	3300028608	Soil	MTVLNRRDVLKGALGAFAWWTSARVLGAQQASGGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPK
Ga0247825_100179004	3300028812	Soil	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTIMA
Ga0307500_101552062	3300031198	Soil	VPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTI
Ga0307497_105932611	3300031226	Soil	MAVSLNRRDVLRGALGVFATWASSRVLGAQQAVGGVRRLTDQMAVVDGGGSNVLAFSTGDGFVV
Ga0308194_100332342	3300031421	Soil	MTIINRRDVLKGALGAFASWTSARVLSAQQAIGAVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVD
Ga0310887_100826691	3300031547	Soil	MAVRLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQTAVVDGGGSNVLAFFTGEGFVLVDGGAPKSFDTIMASLGANAKVNTLINTHHHVDQTG
Ga0310887_107955812	3300031547	Soil	MAVSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGANARVN
Ga0307408_1010066612	3300031548	Rhizosphere	MTVLNRRAVLKGALGAFASWTSTRVLSAQQASGGVRRLTDRMTVVDGGGSNVVAFFTGESFVLVDGGAPKSFDKIMASLGAKARVHTLFNTHH
Ga0310886_102871311	3300031562	Soil	MVVPLNRRDVLKGALGVFATWTSSRVLGAQQASGGVSRLTDQMAVVDGGGSNVVAFSTGEGFVLVDGGAPKSFDRIVASLGANA
Ga0310886_103461911	3300031562	Soil	MAVSLNRRDVLKGALGVFATWASPRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGANASVNTLF
Ga0310886_105204391	3300031562	Soil	VSLNRRDVLKGALGVLATWTSSRVLSAQQASGGVRLTDQMAVVDGAGSNILAFFAGEGFVLVDG
Ga0307405_115547961	3300031731	Rhizosphere	MAVSVHRRDVLKGALGVLGAWASSGVLSAQQAPGAVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPKSYDKVM
Ga0310907_101258172	3300031847	Soil	MAVSLNRRNVLKGALGVFATWTSSRVLCAQQAFGGVRRLTDQMTVVDGGGSNVLAFFTGEGVVLVDGGAPKSFDTIMASLGANARVNTLF
Ga0310891_100161481	3300031913	Soil	MAVSLNRRDVLKGALGVFATWASPRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAIMASLGANASVNTLFNTHH
Ga0310903_101167841	3300032000	Soil	MAVPLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGA
Ga0310897_102147862	3300032003	Soil	MAVSLHRRDVLKGALGLFATWASSRVLGAQQAFRGGRRLGDQMAVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDTVMTSLGANARVHTLFN
Ga0310902_108826982	3300032012	Soil	MAVSLNRRDVLKGALGVFATWASPRVLSAQQAVGGVRRLTDRIALVDGGGSNVLAFFTGEGFVLVDGGAPKSFDAI
Ga0310906_107482851	3300032013	Soil	VSLNRRDVLKGALGVFATWTSSRVLSAQQAFGGVRRLTDQMAVVDGGGSNILAFFTGEGFVLVDGGAPKSFDTIMASLGANAKVNT
Ga0310889_105320942	3300032179	Soil	MAVSLNRRDVLKGALGVLATWTSSRVLSAQQASGGVRLTDQLAVVDGAGSNILAFFAGEGFVLVDGGAPKSFDKVMASLGANAKVNTLFNTHH
Ga0310896_106505281	3300032211	Soil	VPLNRRDVLKGALGVFATWTSAGVVGAQQSRVAVIDGGGSNVLAVSTGDGFVLVDGGAPKSFEKVMG
Ga0364929_0073456_790_1056	3300034149	Sediment	MVVPLNRRDVLKGALGVFATWTSSRVLGAQQASGGVRRLTDQMAVVDGGGSNVVAFSTGEGFVLVDGGAPKSFDRIVASLGANAKVHTL
Ga0314781_074980_2_277	3300034660	Soil	MAVRLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGGNVLAFSTGEGLVLVDGGAPKSFDKLMASLGANARVNTLFNT
Ga0314787_080665_306_578	3300034665	Soil	MAVRLNRREVLKGALGLFATWASSRVLSAQQAFGGVHRLTDQMAVVDGGGSNVLAFFTGEGIVLVDGGAPKSFDTIMASIGANAKVNTLIN
Ga0373948_0081737_2_265	3300034817	Rhizosphere Soil	MAVSLNRRNVLKGALGVFATWTSSRVLCAQQAFGGVRRLTDQMTVVDGGGSNVLAFFTGDGFVLVDGGAPKSFDRIMASLGANARVHT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055506

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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