Metagenome Family F055258

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055258
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	74 residues
Representative Sequence	MSGEVPIEIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP
Number of Associated Samples	59
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.68 %
% of genes near scaffold ends (potentially truncated)	35.25 %
% of genes from short scaffolds (< 2000 bps)	86.33 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.906 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.849 % of family members)
Environment Ontology (ENVO)	Unclassified (52.518 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.295 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.43% β-sheet: 0.00% Coil/Unstructured: 47.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.90245
c.49.2.0: automated matches	d6rdps_	6rdp	0.89812
a.25.1.3: Manganese catalase (T-catalase)	d1o9ia_	1o9i	0.89646
a.2.7.1: Seryl-tRNA synthetase (SerRS)	d1seta1	1set	0.86842
a.7.12.1: PhoU-like	d1vcta1	1vct	0.85939

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04392	ABC_sub_bind	7.19
PF07731	Cu-oxidase_2	2.88
PF00561	Abhydrolase_1	2.16
PF08241	Methyltransf_11	0.72
PF01966	HD	0.72
PF00891	Methyltransf_2	0.72
PF08386	Abhydrolase_4	0.72
PF07885	Ion_trans_2	0.72
PF00929	RNase_T	0.72
PF01391	Collagen	0.72
PF13515	FUSC_2	0.72
PF01569	PAP2	0.72
PF12146	Hydrolase_4	0.72
PF00536	SAM_1	0.72
PF01042	Ribonuc_L-PSP	0.72
PF13495	Phage_int_SAM_4	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.19
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.88
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
All Organisms	root	All Organisms	33.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
cellular organisms	root	All Organisms → cellular organisms	33.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.16 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.35 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.16 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.16 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.72 %
Cereibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter	0.72 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.72 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.16 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.44 %
Cereibacter sediminicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter sediminicola	0.72 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Caballeronia pedi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia pedi	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.16 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.44 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.72 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.72 %
Cereibacter sediminicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter sediminicola	0.72 %
Caballeronia pedi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia pedi	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10361531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300005332\|Ga0066388_100723336	Not Available	1599	Open in IMG/M
3300005332\|Ga0066388_100735745	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300005332\|Ga0066388_101217145	Not Available	1289	Open in IMG/M
3300005332\|Ga0066388_104138882	Not Available	739	Open in IMG/M
3300005332\|Ga0066388_104687034	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300005332\|Ga0066388_108108371	Not Available	525	Open in IMG/M
3300005764\|Ga0066903_100871956	Not Available	1624	Open in IMG/M
3300005764\|Ga0066903_101556213	Not Available	1251	Open in IMG/M
3300005764\|Ga0066903_102308349	Not Available	1039	Open in IMG/M
3300005764\|Ga0066903_107067579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005764\|Ga0066903_109049287	Not Available	504	Open in IMG/M
3300010048\|Ga0126373_10048031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3783	Open in IMG/M
3300010048\|Ga0126373_10059234	Not Available	3428	Open in IMG/M
3300010048\|Ga0126373_10884472	Not Available	957	Open in IMG/M
3300010048\|Ga0126373_11188291	Not Available	829	Open in IMG/M
3300010048\|Ga0126373_11365868	Not Available	774	Open in IMG/M
3300010048\|Ga0126373_11466311	Not Available	748	Open in IMG/M
3300010048\|Ga0126373_11849172	Not Available	667	Open in IMG/M
3300010162\|Ga0131853_10775741	Not Available	777	Open in IMG/M
3300010358\|Ga0126370_11461979	Not Available	648	Open in IMG/M
3300010359\|Ga0126376_10238279	Not Available	1538	Open in IMG/M
3300010359\|Ga0126376_10441080	Not Available	1186	Open in IMG/M
3300010360\|Ga0126372_10842814	Not Available	913	Open in IMG/M
3300010360\|Ga0126372_11066958	Not Available	824	Open in IMG/M
3300010361\|Ga0126378_10158219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2314	Open in IMG/M
3300010361\|Ga0126378_10211110	All Organisms → cellular organisms → Bacteria → Proteobacteria	2021	Open in IMG/M
3300010361\|Ga0126378_10389097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1506	Open in IMG/M
3300010366\|Ga0126379_13233006	Not Available	546	Open in IMG/M
3300010376\|Ga0126381_100165930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2917	Open in IMG/M
3300010376\|Ga0126381_100182773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2787	Open in IMG/M
3300010376\|Ga0126381_100328732	Not Available	2105	Open in IMG/M
3300010376\|Ga0126381_100532662	Not Available	1662	Open in IMG/M
3300010376\|Ga0126381_101641003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	929	Open in IMG/M
3300010376\|Ga0126381_104126003	Not Available	564	Open in IMG/M
3300010398\|Ga0126383_11297730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300010937\|Ga0137776_1570526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	697	Open in IMG/M
3300012971\|Ga0126369_10264929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300016270\|Ga0182036_10482708	Not Available	979	Open in IMG/M
3300016270\|Ga0182036_10662198	Not Available	842	Open in IMG/M
3300016270\|Ga0182036_11001669	Not Available	689	Open in IMG/M
3300016270\|Ga0182036_11246048	Not Available	619	Open in IMG/M
3300016270\|Ga0182036_11643537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300016270\|Ga0182036_11781826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300016294\|Ga0182041_10506961	Not Available	1047	Open in IMG/M
3300016294\|Ga0182041_10585134	Not Available	979	Open in IMG/M
3300016294\|Ga0182041_10711796	Not Available	891	Open in IMG/M
3300016294\|Ga0182041_11616203	Not Available	599	Open in IMG/M
3300016294\|Ga0182041_11706735	Not Available	583	Open in IMG/M
3300016294\|Ga0182041_11950275	Not Available	546	Open in IMG/M
3300016319\|Ga0182033_10227442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1502	Open in IMG/M
3300016319\|Ga0182033_11064981	Not Available	721	Open in IMG/M
3300016341\|Ga0182035_10184772	Not Available	1635	Open in IMG/M
3300016341\|Ga0182035_10336033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1251	Open in IMG/M
3300016341\|Ga0182035_10917171	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300016357\|Ga0182032_10350686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300016357\|Ga0182032_12063102	Not Available	501	Open in IMG/M
3300016371\|Ga0182034_10847339	Not Available	784	Open in IMG/M
3300016371\|Ga0182034_11503949	Not Available	590	Open in IMG/M
3300016387\|Ga0182040_10387154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300016387\|Ga0182040_11296156	Not Available	615	Open in IMG/M
3300016404\|Ga0182037_11037407	Not Available	716	Open in IMG/M
3300016404\|Ga0182037_11314848	Not Available	637	Open in IMG/M
3300016422\|Ga0182039_10257537	Not Available	1425	Open in IMG/M
3300016422\|Ga0182039_10932106	Not Available	776	Open in IMG/M
3300016422\|Ga0182039_12094964	Not Available	521	Open in IMG/M
3300016445\|Ga0182038_10132731	Not Available	1871	Open in IMG/M
3300016445\|Ga0182038_10244970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1438	Open in IMG/M
3300017822\|Ga0187802_10428435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	525	Open in IMG/M
3300017924\|Ga0187820_1004311	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300017955\|Ga0187817_10971327	Not Available	544	Open in IMG/M
3300017970\|Ga0187783_10536702	Not Available	847	Open in IMG/M
3300017970\|Ga0187783_11278447	Not Available	529	Open in IMG/M
3300017993\|Ga0187823_10195236	Not Available	661	Open in IMG/M
3300017994\|Ga0187822_10110984	Not Available	847	Open in IMG/M
3300018058\|Ga0187766_10081261	Not Available	1943	Open in IMG/M
3300018058\|Ga0187766_10219356	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300018058\|Ga0187766_10359389	Not Available	955	Open in IMG/M
3300018058\|Ga0187766_10657292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300018058\|Ga0187766_10925486	Not Available	616	Open in IMG/M
3300018058\|Ga0187766_11306130	Not Available	529	Open in IMG/M
3300018060\|Ga0187765_10006290	All Organisms → cellular organisms → Bacteria	5116	Open in IMG/M
3300018062\|Ga0187784_11242703	Not Available	591	Open in IMG/M
3300020150\|Ga0187768_1083183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300021560\|Ga0126371_10132557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter sediminicola	2533	Open in IMG/M
3300021560\|Ga0126371_10133970	All Organisms → cellular organisms → Bacteria → Proteobacteria	2520	Open in IMG/M
3300021560\|Ga0126371_10216059	Not Available	2019	Open in IMG/M
3300021560\|Ga0126371_10330544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1656	Open in IMG/M
3300021560\|Ga0126371_10358902	Not Available	1594	Open in IMG/M
3300021560\|Ga0126371_10622257	Not Available	1228	Open in IMG/M
3300021560\|Ga0126371_10625302	Not Available	1225	Open in IMG/M
3300021560\|Ga0126371_11306164	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300021560\|Ga0126371_11600748	Not Available	777	Open in IMG/M
3300021560\|Ga0126371_12352507	Not Available	644	Open in IMG/M
3300027874\|Ga0209465_10405001	Not Available	683	Open in IMG/M
3300031545\|Ga0318541_10752772	Not Available	544	Open in IMG/M
3300031573\|Ga0310915_10911121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031679\|Ga0318561_10675281	Not Available	568	Open in IMG/M
3300031679\|Ga0318561_10794585	Not Available	520	Open in IMG/M
3300031719\|Ga0306917_10607772	Not Available	860	Open in IMG/M
3300031744\|Ga0306918_11064566	Not Available	627	Open in IMG/M
3300031795\|Ga0318557_10393526	Not Available	637	Open in IMG/M
3300031819\|Ga0318568_11039927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia pedi	506	Open in IMG/M
3300031833\|Ga0310917_10608808	Not Available	742	Open in IMG/M
3300031879\|Ga0306919_10697233	Not Available	782	Open in IMG/M
3300031879\|Ga0306919_10700797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300031890\|Ga0306925_10168884	Not Available	2357	Open in IMG/M
3300031910\|Ga0306923_10295654	Not Available	1851	Open in IMG/M
3300031910\|Ga0306923_10327419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1749	Open in IMG/M
3300031910\|Ga0306923_11782290	Not Available	633	Open in IMG/M
3300031910\|Ga0306923_12386811	Not Available	525	Open in IMG/M
3300031912\|Ga0306921_11427604	Not Available	760	Open in IMG/M
3300031912\|Ga0306921_12284145	Not Available	568	Open in IMG/M
3300031942\|Ga0310916_10479391	Not Available	1060	Open in IMG/M
3300031945\|Ga0310913_10998581	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031947\|Ga0310909_10995224	Not Available	685	Open in IMG/M
3300031947\|Ga0310909_11290977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031954\|Ga0306926_10071068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4213	Open in IMG/M
3300031954\|Ga0306926_11789489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031954\|Ga0306926_12699954	Not Available	539	Open in IMG/M
3300032001\|Ga0306922_10050905	All Organisms → cellular organisms → Bacteria → Proteobacteria	4284	Open in IMG/M
3300032001\|Ga0306922_10286635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300032001\|Ga0306922_10777946	Not Available	1002	Open in IMG/M
3300032001\|Ga0306922_12133384	Not Available	542	Open in IMG/M
3300032025\|Ga0318507_10430139	Not Available	575	Open in IMG/M
3300032052\|Ga0318506_10501097	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300032059\|Ga0318533_10465789	Not Available	925	Open in IMG/M
3300032059\|Ga0318533_10978469	Not Available	621	Open in IMG/M
3300032059\|Ga0318533_11267723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300032076\|Ga0306924_10126478	All Organisms → cellular organisms → Bacteria → Proteobacteria	2912	Open in IMG/M
3300032076\|Ga0306924_10679979	Not Available	1158	Open in IMG/M
3300032076\|Ga0306924_11618717	Not Available	682	Open in IMG/M
3300032261\|Ga0306920_101975633	Not Available	818	Open in IMG/M
3300033289\|Ga0310914_10394854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1252	Open in IMG/M
3300033289\|Ga0310914_11187536	Not Available	665	Open in IMG/M
3300033289\|Ga0310914_11817142	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.28%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.96%
Aquatic	Environmental → Aquatic	4.32%
Arthropoda	Host-Associated → Arthropoda	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.96%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.98%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.60%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.72%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.60%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103615311	3300001867	Forest Soil	MSDEVPIEIEDKPTAVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGIGERLXIAKQILAREEARASHSP*
Ga0066388_1007233364	3300005332	Tropical Forest Soil	MSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGDRLAIAKQIPAREEARASHSP*
Ga0066388_1007357454	3300005332	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIA
Ga0066388_1012171452	3300005332	Tropical Forest Soil	MSDEVPIEIDDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASHSL*
Ga0066388_1041388822	3300005332	Tropical Forest Soil	MSSEVPIEIEDKPTAVSIMRELVERLQDTIEALKLAIVRNRKSEEYRKALKGTEARLAIAKQILAREEARASHSP*
Ga0066388_1046870342	3300005332	Tropical Forest Soil	KPTAVDIMRELVEHLQDTIEALKREIARNRKSDEYRKALKGTEARLTIAKQILAREEARASRSP*
Ga0066388_1081083711	3300005332	Tropical Forest Soil	MSGEVPIEIEDKPTAVGMMRGLVERLQDTIEALKREIARNRRSDEYRKALKDTEARLTIAKQILAREEARTSHSP*
Ga0066903_1008719561	3300005764	Tropical Forest Soil	MSNEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGAGERLTIAKQILAREEARASHSP*
Ga0066903_1015562133	3300005764	Tropical Forest Soil	MSSEVPIEIEDEPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGDRLAIAKQIPAREEARASHSP*
Ga0066903_1023083493	3300005764	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP*
Ga0066903_1070675791	3300005764	Tropical Forest Soil	MSSEVPIEIEDKPTSVTIMHELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLAIAKQILAREEARASHSP*
Ga0066903_1090492872	3300005764	Tropical Forest Soil	MSGEVPIEIEDKPTAVGMMRELVERLQDTIEALKREIARNRRSDEYRKALKDTEARLTIAKQ
Ga0126373_100480312	3300010048	Tropical Forest Soil	MSGEVPIEIEDKPTADSIIRELVEHLQDTIEALKREIVRNPKSHEYRKAIKGIGERLTIAKQILAREEARASHSP*
Ga0126373_100592343	3300010048	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVEHLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP*
Ga0126373_108844723	3300010048	Tropical Forest Soil	MSGEVPIEIEDKPTAVDIMRELVEHLQDTVEALKREIVRNPKSDEYRNALKGTGERLTIAKQILAREEARTSHSP*
Ga0126373_111882911	3300010048	Tropical Forest Soil	MNGEVPIEIEVKPTAVDIMRELVEHLQDTIEALKREIARNRKSDEYRKALKGTEARLTIAKQILAREEARAS
Ga0126373_113658681	3300010048	Tropical Forest Soil	MSSEVPIEIEDKPTSVSIMREFVERLQDTIEALKREVVSNPNGDEYRKALKGTGERLTIAKQILAREEARASHSP*
Ga0126373_114663111	3300010048	Tropical Forest Soil	MSGDGRIEIEDNPTAVSIMRELVEHMQDTTEALKREIVRNPKSHEYRKALKSIGERRAIAKQILAREQAIASHSP*
Ga0126373_118491721	3300010048	Tropical Forest Soil	MSGEVPIEIEDKPTAVGMMRELVERLQDTIEALKREIARNRRSDEYRKALKDTEARLTIAKQILAREEARTSHSP*
Ga0131853_107757412	3300010162	Termite Gut	MSSEVPIEIEDKPTAVTIMRELVEHLRDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHCS*
Ga0126370_114619792	3300010358	Tropical Forest Soil	AVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTVAKQILARAKLTHAPVGLSY*
Ga0126376_102382793	3300010359	Tropical Forest Soil	MSGEVPIEIDDKPSAVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALRGTGERLTIAKQILAQAEARRQNRRR*
Ga0126376_104410802	3300010359	Tropical Forest Soil	EVPIEIEDKPTAVSIMRELVERLQHTMEALKLAIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP*
Ga0126372_108428142	3300010360	Tropical Forest Soil	MSNEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLAIAKQILAREEARTSHCP*
Ga0126372_110669581	3300010360	Tropical Forest Soil	MSGEVPIEIEDKPTAVGIMRELVEHLQDTTEALKREIVLNPRSQQYRKALQGVGERLSIAKQI
Ga0126378_101582191	3300010361	Tropical Forest Soil	MSSKVPIEIENKPTAVTILRELVEHLQDTIEALKLAIVRNRKSEEYRKALKGTEARLAIAKQILAREEARASHSP*
Ga0126378_102111103	3300010361	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIAKVG*
Ga0126378_103890971	3300010361	Tropical Forest Soil	EIEDKPTADSIIRELVEHLQDTIEALKREIVRNPKSHEYRKALKGIGERLTIAKQILAREEARASHSP*
Ga0126379_132330061	3300010366	Tropical Forest Soil	MSNEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGAGERLTIAKQILAREEARASHLP*
Ga0126381_1001659308	3300010376	Tropical Forest Soil	MSSKVPIEIENKPTAVTILRELVEHLQDTIEALKREVVRNPKSDEYRNGTGERLTIAKQILAREEARASHSP*
Ga0126381_1001827731	3300010376	Tropical Forest Soil	MSSEVPIEIDDKPTVVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALRGTGERLTIAKQILAQAEARRQNRRR*
Ga0126381_1003287321	3300010376	Tropical Forest Soil	MGSEVPIEIEDKPTAVSIIRELVERLQDTIEALKRAIVRNPKCDEYRKALKGTGERLTIAKQILAHEEARGSHLPLLRPN*
Ga0126381_1005326623	3300010376	Tropical Forest Soil	MSSEVPIEIEDKPTAVDIMRELVEHLQNTIEALKREIARNRKSDEYRKALKGTEARLTIAKQILAREEARASQSP*
Ga0126381_1016410031	3300010376	Tropical Forest Soil	MSSEVPIEIEDKPTAVSIMRELVEHLQDTIEALKREIIRNPKSDEYRKALKGTSERLTIAKQILAREEARASHSP*
Ga0126381_1041260032	3300010376	Tropical Forest Soil	MSGELPIQIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASH
Ga0126383_112977302	3300010398	Tropical Forest Soil	MSSEVPIEIEDKPTAVSIMRELVEHLQDTIEALKREIIRNPNYRKALKGTGERTIAKQILAREDVRASHSP*
Ga0137776_15705261	3300010937	Sediment	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKREIARNRKSDEYRKALKGAEARLTIAKQILAREEARA
Ga0126369_102649294	3300012971	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIAKQILAREEARASHSPSKGGNIIALSAKL*
Ga0182036_104827081	3300016270	Soil	MSSKVPIEIEDKPTAVSVMRELVEKLQATTMALKREIARNPKSDECRKALNGTEARLAIAKQILAREEATASHSP
Ga0182036_106621981	3300016270	Soil	MSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREE
Ga0182036_110016692	3300016270	Soil	MSGELPIQIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASHSL
Ga0182036_112460481	3300016270	Soil	MSGEVPVEIEDKPTAVSIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGAGERLTIAKQILAREEARASHSP
Ga0182036_116435372	3300016270	Soil	MSGVVPIEIEDRPTAVGIMRELVEHLQDTINALKREIVRNPRSDEYRKSLKGAGERLTIAEQILAREEARASHSP
Ga0182036_117818261	3300016270	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKRQIVRHPESDEYRKALKGTGERLTIAKQI
Ga0182041_105069612	3300016294	Soil	MGSEVPIEIEDKPTAVSIMRELVERLQDTIEALKREIVRNPKSDEYRKALKGTEARLTIARQILAREEARALHCP
Ga0182041_105851341	3300016294	Soil	MSSKVPIEIEDKPTAVSVMRELVQQATTMALKREIARNPKSDEYRKALKGTEARLTIAKQILAREEARA
Ga0182041_107117961	3300016294	Soil	RFGRINFMSSEVPIEIEDTPTAVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIAKQILACEEARASHST
Ga0182041_116162031	3300016294	Soil	MSSEVPIEIEDKPTAVSVMRGIVEHLQDTIEALKREIVRNPKSDEYRKALKNIGERLTIAKQILAREEVRASHSP
Ga0182041_117067351	3300016294	Soil	MSGEVPIEIEDKPTAVSIMRELAEHLQDTIEALKREIIRNPKSDEYRKALKGTSERLTIAKQILAREEARASHSP
Ga0182041_119502751	3300016294	Soil	MSSEVPIEIEGKSTAVDIMRELVEHLQDTMEALKPEIVRNPKSDEYRKALKGTGERLTIAKQILTREQARASH
Ga0182033_102274421	3300016319	Soil	MSSKVPIEIEDKPTAVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGIGERLTIVKQILAREEGRASHSP
Ga0182033_110649811	3300016319	Soil	MSGEVPIEIEDKPTAVSIMRELVEHLQDTIEALKLAIVRNRKSEEYRKALKGTEARLAVAKQILAREEARASRSP
Ga0182035_101847721	3300016341	Soil	MSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTS
Ga0182035_103360332	3300016341	Soil	MSGVVPIEIEDRPTAVGIMREFVEHLQDTIDALKREIVRNPRSDEYRKALKGAGERLTIAEQILAREEARASHSP
Ga0182035_109171712	3300016341	Soil	SMRGLGLAPFWEDQLMSSEVPIEIEDKQTAVSVMRELVEKLQVTIEALKREIVRNPKSDEYRKALKGTGERLTIAKHF
Ga0182032_103506862	3300016357	Soil	MSSEVPIELEDKPTAVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIAKQILAREEARSSHSP
Ga0182032_120631021	3300016357	Soil	MSGEVPIEIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP
Ga0182034_108473391	3300016371	Soil	MSSEVPIEIDDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0182034_115039492	3300016371	Soil	MRGLGLAPLWEYQLMSSEVPIEIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASHSL
Ga0182040_103871541	3300016387	Soil	VLGELHMSGVVPIEIEDRPTAVGIMRELVEHLQDTINALKREIVRNPRSDEYRKALKGAGERLTIAEQILAREEARASHSP
Ga0182040_112961561	3300016387	Soil	MSREVPIEIEDKPTAVDIMRELVEHLQNTIEALQLAIVRYPKSDEYRKALKGTCERLTIAKQILAREEARASYSP
Ga0182037_110374071	3300016404	Soil	MGSEVPIEIEDKPTAVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTSERLTIAKQILAREEARALHAP
Ga0182037_113148483	3300016404	Soil	SEVPIEIEDKQTADSVMRELVEHLQATIEALKREIVRNPKSDEYRKALKGTEARLTIAKQSLSREEARASHSQ
Ga0182039_102575373	3300016422	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKREIARNRKSDEYRKALNGAEARLTIAKQILAREEARASHPP
Ga0182039_109321061	3300016422	Soil	LLPHAPVWDWPVWEGQLMSSEVPIEREENQTANSIKREQHDHLQDTIEALKREIVRNPKSDEYRKALKGTGERLAIAKQILAREEARASQSP
Ga0182039_120949641	3300016422	Soil	MSGVVPIEIEDRPTAVGIMRELVEHLQDTINALKREIVRNPRSDEYRKALKGAGERLTIA
Ga0182038_101327311	3300016445	Soil	EVPIEIENKPTAVDIMRELVKHLQDTIEALKREIVRNPRSDEYRKALKGAGERLTIAEQILAREEARASHSP
Ga0182038_102449701	3300016445	Soil	MSSEVPIEIEDKQTAVSVMRELVEKLQGTTMALKREIARNPKSDEYRKALNGTEARLTIAKQILTREEARASHSP
Ga0187802_104284351	3300017822	Freshwater Sediment	MSSEVPIEIEDRPTSVSIMREFVEHLQDTIEALKREIGRNPKSDEYRKALKGTGERLTIAKQILAREEARTSHSP
Ga0187820_10043111	3300017924	Freshwater Sediment	MSSEVPIEIEDRPTSVSIMREFVEHLQDTMEALKREIGRNPKSDEYRKALEGTGERLTIAKQILAREEARASHSP
Ga0187817_109713271	3300017955	Freshwater Sediment	LAPFWEIQLMSSEVPIEIEDRPTSVSIRREFVEHLQDTMEALKREIGRNPKSDEYRKALKGIGERLTIAKQILAREEARASHSP
Ga0187783_105367022	3300017970	Tropical Peatland	MSGEVPIEIEDKPTPVSIVRDLVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP
Ga0187783_108371611	3300017970	Tropical Peatland	KPTAVSIMRELVEQLQDTIEALKREIARNRKSDEYRKALKSTEARLTIAKQILAREKARA
Ga0187783_112784471	3300017970	Tropical Peatland	MGSEVPIEIDDKPTAVSIMRELVERLQDTIEALKLAIVRNRKSEEYRKALKGTEARLAIAKQILAREEARASHSP
Ga0187823_101952362	3300017993	Freshwater Sediment	MSSEVPIEIEDKPTAVNIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQIL
Ga0187822_101109841	3300017994	Freshwater Sediment	LAPFWEIQLMSSEVPIEIEDRPTSVSIMRELVEHLQDTIDALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEAGASHSP
Ga0187766_100812615	3300018058	Tropical Peatland	MSGEVPIEIEDKPTAVTIMRELVEHLQDTIEALKREIVCNPKRDEYRKAFKGTGERLTNAKQILAREEARASHSP
Ga0187766_102193562	3300018058	Tropical Peatland	IEDKPTAVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREETRASHSP
Ga0187766_103593891	3300018058	Tropical Peatland	MSSEVPIEIEDKPTAVDIMRELVEHLQDTMEALKRAIVRNPKSDEYRKALKGTDERLTIAKQILAREEARA
Ga0187766_106572921	3300018058	Tropical Peatland	PTAVSIMRELVEHLQATIEALKREIVRNPKSDEYRKALKGTGERLNIAKQILAREEARASHSA
Ga0187766_109254862	3300018058	Tropical Peatland	MSNEVPIEIEDKQTAVSVMRELVEKLQDTTMALKREIASNPKSDEYRKALKGTEARLTIAKQILAREEARASQSP
Ga0187766_113061301	3300018058	Tropical Peatland	MSSEVPIEIEDKPTAVSIMRELVEHLQDTIEALKREIARNRKSDEYRKALKGTGERLTSAKQILAREEARASHSP
Ga0187765_100062909	3300018060	Tropical Peatland	MSGEVPIEIEDKPTAISIIRELVEHLQATIEALKREIVRNPKSDEYRKALKSTGERLTIASREEARASHSP
Ga0187784_112427031	3300018062	Tropical Peatland	MGSEVPIEIDDRPTAVSIMRELVEHLQDTIEALKREIVRNRKSEEYRKALKGTEARLTIAKQILAREEARASHSP
Ga0187768_10831832	3300020150	Tropical Peatland	MSSEVPIEIEDKPTAVTIMRELVEHLQDTIEALKREVLRNPKSDEYRKALKGTDERLTIAKQILAREEARA
Ga0126371_101325571	3300021560	Tropical Forest Soil	DISLRLFCGGNDAAVAVSDWPRFGKQRMSGEVPIEIEDKPTADSIIRELVEHLQDTIEALKREIVRNPKSHEYRKAIKGIGERLTIAKQILAREEARASHSP
Ga0126371_101339704	3300021560	Tropical Forest Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKLAIACNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP
Ga0126371_102160592	3300021560	Tropical Forest Soil	MSNEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGAGERLTIAKQILAREEARASHSP
Ga0126371_103305442	3300021560	Tropical Forest Soil	MSGEVPIEIEDKPTAVGMMRELVERLQDTIEALKREIARNRRSDEYRKALKDTEARLTIAKQILAREEARTSHSP
Ga0126371_103589022	3300021560	Tropical Forest Soil	MSSEVPIEIEDEPTSVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGDRLAIAKQIPAREEARASHSP
Ga0126371_106222571	3300021560	Tropical Forest Soil	APFWEDQLMSGELPIQIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASHSL
Ga0126371_106253022	3300021560	Tropical Forest Soil	MSGEVPIEIEDKPTAVDIMRELVEHLQDTVEALKREIVRNPKSDEYRNALKGTGERLTIAKQILAREEARTSHSP
Ga0126371_113061641	3300021560	Tropical Forest Soil	WGGSTDERIPIEIEDKPTAVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGIGERLTIAKQILAREEARASHSP
Ga0126371_116007482	3300021560	Tropical Forest Soil	MSSKVPIEIEDKPTAVSVMRELVEKLQATTMALKREIARNPKSDEYRKALNRTEARLTIAKQILAREEARASHSP
Ga0126371_123525071	3300021560	Tropical Forest Soil	MSSKVPIEIADKPTPVSILRELVEDLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILVREKARASHSP
Ga0209465_104050013	3300027874	Tropical Forest Soil	MRGMRLAPFWEDQLMSGEVPIEIEDKPTSVTIMRERVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLAIAKQV
Ga0318541_107527721	3300031545	Soil	GSVEGGVMSSEVPIEIENKPTAVSIMRELVERLQDTIEALKREIVRNPKSDEYRKALKGTGERLAIAKQILAREEARASHSP
Ga0310915_109111212	3300031573	Soil	APIEIEDKPTAVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIAKQILAREEARSSHSP
Ga0318561_106752811	3300031679	Soil	MSSKVPIEIEDKPTAVSIIHELVEHLQDTIEALKCEIVRNLKSDEYRKTLKGTGERLTIAKQILAREEARTSHCP
Ga0318561_107945852	3300031679	Soil	MSGVVPIEIEDRPTAVGIMREFVEHLQDTIDALKREIVRNPRSDEYRKSLKGAGERLTIAEQILAREEARASHSP
Ga0306917_100648243	3300031719	Soil	EIEDKPTAVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIANQILTKH
Ga0306917_106077721	3300031719	Soil	MSSEVPIELEDKPTAVTIMRELVEHLQHTIEALKREVVRNPKSSEYRRALKGTGERLTIAKQILAREEARSSHSP
Ga0306918_110645662	3300031744	Soil	MSGKVPIEIEDKPTAVSIMHELVEHLQDIIEALKREIVRNPKSDEYRKALKGTSKRLTIAKQILAREEARASHSP
Ga0318557_103935261	3300031795	Soil	MSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSH
Ga0318568_110399271	3300031819	Soil	MSAQVPIEIEDKPTAVSIMRELVEHLQDTMEALKREIVRNPKSDEYRKALKGTSERLTIVKQILARQEARASHSP
Ga0310917_106088081	3300031833	Soil	MSSKVPIEIEDKPTAVSVMRELVQQATTMALKREIARNPKSDEYRKALNGTEARLTIAKQILTREEARASHSP
Ga0306919_106972332	3300031879	Soil	MSSEVPIEIEDKPTAVTIMRELVEHLQDSIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILACEEARASHST
Ga0306919_107007973	3300031879	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKREIARNRKSDEYRKALNGAEARLTIAKQILAREEARASHLP
Ga0306925_101688844	3300031890	Soil	MRGLGLAPFWEDQLMSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0306923_102956541	3300031910	Soil	MSGVVPIEIEDRPTAVGIMRELVEHLQDTINALKREIVRNPRSDEYRKALKGAGERLTIAEQILAREEARASHSP
Ga0306923_103274191	3300031910	Soil	LAPFWEDQLMSSKVPIEIEDKPTAVSVMRELVQQATTMALKREIARNPKSDEYRKALNGTEARLTIAKQILTREEARASHSP
Ga0306923_117822901	3300031910	Soil	MSSEVPIEIEDKPTSVTIMRELVDHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0306923_123868111	3300031910	Soil	MGSEVPIEIEDKPTAVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTVAKQILAREEARV
Ga0306921_114276043	3300031912	Soil	AVFGLAPFWEDQLMSGEVPIEIEDKPTAVGIMRELVEHLQDTTEALKREIVRNPKSQEYRKALQGVGERLSIAKQILAREESRASHSL
Ga0306921_122841452	3300031912	Soil	FMSSKVPIEIEDKPTAVSIIHELVEHLQDTIEALKCEIVRNLKSDEYRKTLKGTGERLTIAKQILAREEARTSHCP
Ga0310916_104793912	3300031942	Soil	MSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0310913_109985811	3300031945	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKLEIARNRKSDEYRKALKGVEARLTIAKQILAREEARASHPP
Ga0310909_109952241	3300031947	Soil	QLMSGKVPIEIEDKPTAVSIMHELVEHLQDIIEALKREIVRNPKSDEYRKALKGTSKRLTIAKQILAREEARASHSP
Ga0310909_112909771	3300031947	Soil	WCDWLRFGRINLMSSEVPIELEDKPTAVTIMRELVEHLQHTIEALKREVVRNPKSSEYRRALKGTGERLTIAKQILAREEARSSHSP
Ga0306926_100710681	3300031954	Soil	MRGLGLVPFWEDQLMSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREE
Ga0306926_117894891	3300031954	Soil	MSGDVPIEIEDKPTAVTIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIVKQILAREEA
Ga0306926_126999541	3300031954	Soil	MSGVVPIEIEDRPTAVGIMRELVEHLQDTINALKREIVRNPRSDEYRKSLKGAGERLTIAEQILAREEARAS
Ga0306922_100509055	3300032001	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKREIARNRKSDEYRKALKGAEARLTIAKQILAREEARASHPP
Ga0306922_102866352	3300032001	Soil	MSGVVPIEIEDRPTAVGIMREFVEHLQDTIDALKREIVRNPRSDEYRKALKGAGERLTIAEKILAREEARASHSP
Ga0306922_107779461	3300032001	Soil	MRGLGLVPFWEDQLMSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0306922_121333842	3300032001	Soil	MSSKVPIEIEDKPTAVSVMRELVEKLQATTMALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASQSP
Ga0318507_104301392	3300032025	Soil	MSSEVPIEIENKPTAVSIMRELVERLQDTIEALKREIARNRKSDEYRKALKGAEARLTIAKQILAREEARASHPP
Ga0318506_105010972	3300032052	Soil	FWEIQLMSGEVPIEIEDKPTAVSIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIANQILTKHI
Ga0318533_104657892	3300032059	Soil	MSGVVPIEIEDRPTAVGIMREFVEHLQDTIDALKREIVRNPRSDEYRKALKGAGERLTIAEQILAREEARASRSP
Ga0318533_109784692	3300032059	Soil	VPVWEDQLMSSEVPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKKILAREEARTSHSP
Ga0318533_112677231	3300032059	Soil	VPIEIEDKPSAVSIMRELVEHLQDTIEALKREIVRNPKSDEYRKALKGTGERLNIAKQILAREEARASQSP
Ga0306924_101264786	3300032076	Soil	MSGEVPIEIEDKPTAISIMRELVERLQDTIEALKREIARNRKSDEYRKALKGAEARLTIAKQILAHEEARASHPP
Ga0306924_106799794	3300032076	Soil	MSSEVPIEIEDKPTAVSIMRELVERLQDTIEALKREIVRNPKSDEYRKALKGTGERLTIAKQILAREEARALHSS
Ga0306924_116187171	3300032076	Soil	MGSEVPIEIEDKPTAVSIMRELVEHLQDTIEALKLAIVRNRKSEEYRKALKGTEARLAVAKQILAREEARASRLQ
Ga0306924_117309782	3300032076	Soil	MSSEVPIELEDKPTAVTIMRELVEHLQHTIEALKREVVRNPKSSEYRRALKGTGERLTIA
Ga0306920_1019756331	3300032261	Soil	MSGEVPIEIEDKPTAVSIMRELVERLQDTIEALKLAIVRNPKSDEYRKALKGTGERLTIAKQILAREEARASHSP
Ga0310914_103948542	3300033289	Soil	EIEDKPTAVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKGTGERLTIAKQILAREEARSSHSP
Ga0310914_111875362	3300033289	Soil	MSREVPIEIEDKPTAVDIMRELVEHLQNTIEALQLAIVRYPKSDEYRKALKGTCERLTIAKQILAREEARASHSP
Ga0310914_118171421	3300033289	Soil	VPIEIEDKPTSVTIMRELVEHLQDTIEALKREVVRNPKSDEYRKALKDTGERLIAKQILAREEARTSHSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences