Metagenome / Metatranscriptome Family F055254

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055254
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	46 residues
Representative Sequence	AMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Number of Associated Samples	113
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.72 %
% of genes near scaffold ends (potentially truncated)	95.68 %
% of genes from short scaffolds (< 2000 bps)	93.53 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.396 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.691 % of family members)
Environment Ontology (ENVO)	Unclassified (38.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.079 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 58.70% Coil/Unstructured: 41.30%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF12697	Abhydrolase_6	21.58
PF04909	Amidohydro_2	10.07
PF00155	Aminotran_1_2	5.04
PF08240	ADH_N	2.16
PF01568	Molydop_binding	2.16
PF03328	HpcH_HpaI	1.44
PF05199	GMC_oxred_C	1.44
PF12695	Abhydrolase_5	1.44
PF02515	CoA_transf_3	1.44
PF00118	Cpn60_TCP1	0.72
PF00582	Usp	0.72
PF01494	FAD_binding_3	0.72
PF03237	Terminase_6N	0.72
PF00884	Sulfatase	0.72
PF00082	Peptidase_S8	0.72
PF07859	Abhydrolase_3	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.44
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.44
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.44
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.44
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.44
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.44
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.72
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.72
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
All Organisms	root	All Organisms	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
cellular organisms	root	All Organisms → cellular organisms	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.60 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.44 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Aestuariivirgaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae	2.16 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.44 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.44 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Aestuariivirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga	2.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Craurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus	1.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
unclassified Aestuariivirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga	2.16 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples	1.44 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	2.16 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	1.44 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Actinobacteria bacterium 13_1_20CM_3_71_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01CD0LF	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10140846	Not Available	501	Open in IMG/M
3300004268\|Ga0066398_10226177	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300004635\|Ga0062388_100353278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300005184\|Ga0066671_10063476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1923	Open in IMG/M
3300005290\|Ga0065712_10661326	Not Available	563	Open in IMG/M
3300005332\|Ga0066388_106762098	Not Available	578	Open in IMG/M
3300005363\|Ga0008090_10037454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300005435\|Ga0070714_100162156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2023	Open in IMG/M
3300005436\|Ga0070713_100439481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300005458\|Ga0070681_11499401	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005543\|Ga0070672_100492170	Not Available	1060	Open in IMG/M
3300005563\|Ga0068855_101906421	Not Available	602	Open in IMG/M
3300005576\|Ga0066708_10394960	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005764\|Ga0066903_106229830	Not Available	623	Open in IMG/M
3300005843\|Ga0068860_100718394	Not Available	1009	Open in IMG/M
3300006028\|Ga0070717_11002221	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300006032\|Ga0066696_10738141	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300006163\|Ga0070715_10022140	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300006175\|Ga0070712_100746984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	837	Open in IMG/M
3300006578\|Ga0074059_11946370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300006606\|Ga0074062_10037932	Not Available	837	Open in IMG/M
3300006854\|Ga0075425_100588337	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300006904\|Ga0075424_101421362	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300006954\|Ga0079219_10806105	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300009093\|Ga0105240_10680539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300009174\|Ga0105241_12011120	Not Available	569	Open in IMG/M
3300009545\|Ga0105237_10691001	Not Available	1027	Open in IMG/M
3300010042\|Ga0126314_10464062	Not Available	917	Open in IMG/M
3300010044\|Ga0126310_11464895	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300010046\|Ga0126384_10333694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300010046\|Ga0126384_11348820	Not Available	663	Open in IMG/M
3300010341\|Ga0074045_11058286	Not Available	508	Open in IMG/M
3300010358\|Ga0126370_11144714	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300010366\|Ga0126379_10744494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	1076	Open in IMG/M
3300010366\|Ga0126379_11600051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300010371\|Ga0134125_11683368	Not Available	690	Open in IMG/M
3300010373\|Ga0134128_12259801	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_100541973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300010376\|Ga0126381_102202341	Not Available	793	Open in IMG/M
3300010376\|Ga0126381_102403191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	756	Open in IMG/M
3300010376\|Ga0126381_103742021	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010400\|Ga0134122_12545754	Not Available	561	Open in IMG/M
3300012986\|Ga0164304_10719870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	760	Open in IMG/M
3300014497\|Ga0182008_10704151	Not Available	577	Open in IMG/M
3300015372\|Ga0132256_102129541	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300015373\|Ga0132257_102334447	Not Available	693	Open in IMG/M
3300015374\|Ga0132255_103530266	Not Available	665	Open in IMG/M
3300016387\|Ga0182040_10357278	Not Available	1134	Open in IMG/M
3300016422\|Ga0182039_10508631	Not Available	1041	Open in IMG/M
3300016422\|Ga0182039_11243145	Not Available	674	Open in IMG/M
3300016445\|Ga0182038_10063562	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300016445\|Ga0182038_11891283	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300017792\|Ga0163161_10632506	Not Available	885	Open in IMG/M
3300017959\|Ga0187779_11117335	Not Available	551	Open in IMG/M
3300017972\|Ga0187781_10306971	Not Available	1126	Open in IMG/M
3300017973\|Ga0187780_11473212	Not Available	503	Open in IMG/M
3300019362\|Ga0173479_10616606	Not Available	570	Open in IMG/M
3300019887\|Ga0193729_1246727	Not Available	569	Open in IMG/M
3300020581\|Ga0210399_10429871	Not Available	1100	Open in IMG/M
3300020583\|Ga0210401_11523545	Not Available	526	Open in IMG/M
3300021168\|Ga0210406_11124990	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300021171\|Ga0210405_10411098	Not Available	1065	Open in IMG/M
3300021171\|Ga0210405_10600742	Not Available	857	Open in IMG/M
3300021403\|Ga0210397_10040453	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300021403\|Ga0210397_11298162	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300021404\|Ga0210389_10374638	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300021406\|Ga0210386_10535408	Not Available	1012	Open in IMG/M
3300021420\|Ga0210394_11159839	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300021560\|Ga0126371_11750440	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300021560\|Ga0126371_13133177	Not Available	559	Open in IMG/M
3300021560\|Ga0126371_13589116	Not Available	523	Open in IMG/M
3300022525\|Ga0242656_1122328	Not Available	528	Open in IMG/M
3300022718\|Ga0242675_1023587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	885	Open in IMG/M
3300025906\|Ga0207699_10409736	Not Available	967	Open in IMG/M
3300025917\|Ga0207660_11018883	Not Available	675	Open in IMG/M
3300025928\|Ga0207700_10663976	Not Available	930	Open in IMG/M
3300025928\|Ga0207700_10733696	Not Available	882	Open in IMG/M
3300025928\|Ga0207700_11314158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	644	Open in IMG/M
3300025939\|Ga0207665_10331601	Not Available	1144	Open in IMG/M
3300025961\|Ga0207712_11322383	Not Available	644	Open in IMG/M
3300026308\|Ga0209265_1115532	Not Available	679	Open in IMG/M
3300026550\|Ga0209474_10250246	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300027109\|Ga0208603_1061899	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300027371\|Ga0209418_1015356	Not Available	1248	Open in IMG/M
3300027855\|Ga0209693_10018289	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300028379\|Ga0268266_10323554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_71_11	1444	Open in IMG/M
3300029636\|Ga0222749_10736871	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300031543\|Ga0318516_10016900	All Organisms → cellular organisms → Bacteria	3652	Open in IMG/M
3300031544\|Ga0318534_10388737	Not Available	802	Open in IMG/M
3300031546\|Ga0318538_10051586	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300031561\|Ga0318528_10417652	Not Available	720	Open in IMG/M
3300031561\|Ga0318528_10614805	Not Available	582	Open in IMG/M
3300031708\|Ga0310686_103258966	Not Available	773	Open in IMG/M
3300031723\|Ga0318493_10184129	Not Available	1096	Open in IMG/M
3300031723\|Ga0318493_10307604	Not Available	856	Open in IMG/M
3300031724\|Ga0318500_10193324	Not Available	972	Open in IMG/M
3300031744\|Ga0306918_11295832	Not Available	560	Open in IMG/M
3300031747\|Ga0318502_10704295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031753\|Ga0307477_10313346	Not Available	1082	Open in IMG/M
3300031764\|Ga0318535_10548014	Not Available	513	Open in IMG/M
3300031781\|Ga0318547_10088184	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300031781\|Ga0318547_10317419	Not Available	948	Open in IMG/M
3300031794\|Ga0318503_10082630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	1009	Open in IMG/M
3300031795\|Ga0318557_10008360	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300031796\|Ga0318576_10395270	Not Available	653	Open in IMG/M
3300031797\|Ga0318550_10095875	Not Available	1394	Open in IMG/M
3300031797\|Ga0318550_10390020	Not Available	674	Open in IMG/M
3300031798\|Ga0318523_10094061	Not Available	1465	Open in IMG/M
3300031833\|Ga0310917_10608090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300031879\|Ga0306919_10420484	Not Available	1026	Open in IMG/M
3300031890\|Ga0306925_10343016	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300031890\|Ga0306925_10912619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	902	Open in IMG/M
3300031897\|Ga0318520_10712697	Not Available	627	Open in IMG/M
3300031910\|Ga0306923_10267721	Not Available	1954	Open in IMG/M
3300031910\|Ga0306923_10574142	Not Available	1268	Open in IMG/M
3300031910\|Ga0306923_11780402	Not Available	633	Open in IMG/M
3300031912\|Ga0306921_10312071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1840	Open in IMG/M
3300031912\|Ga0306921_10587357	Not Available	1289	Open in IMG/M
3300031912\|Ga0306921_11059110	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300031941\|Ga0310912_10325186	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300031942\|Ga0310916_10499996	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300031942\|Ga0310916_10893187	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031945\|Ga0310913_10134969	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300031946\|Ga0310910_10623742	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300032051\|Ga0318532_10014597	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300032055\|Ga0318575_10603272	Not Available	556	Open in IMG/M
3300032059\|Ga0318533_10255710	Not Available	1265	Open in IMG/M
3300032063\|Ga0318504_10038214	Not Available	1955	Open in IMG/M
3300032064\|Ga0318510_10275780	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032076\|Ga0306924_11629168	Not Available	679	Open in IMG/M
3300032089\|Ga0318525_10241472	Not Available	928	Open in IMG/M
3300032091\|Ga0318577_10516599	Not Available	569	Open in IMG/M
3300032094\|Ga0318540_10529511	Not Available	568	Open in IMG/M
3300033289\|Ga0310914_11343559	Not Available	617	Open in IMG/M
3300033289\|Ga0310914_11554057	Not Available	565	Open in IMG/M
3300033290\|Ga0318519_10103196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300033290\|Ga0318519_10356262	Not Available	865	Open in IMG/M
3300033290\|Ga0318519_10481127	Not Available	746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.49%
Host-Associated	Host-Associated	11.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.77%
Plants	Host-Associated → Plants	11.51%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.32%
Freshwater	Environmental → Aquatic → Freshwater	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_3367520	2035918004	Soil	TVTLSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
AF_2010_repII_A001DRAFT_101408462	3300000793	Forest Soil	WIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV*
Ga0066398_102261771	3300004268	Tropical Forest Soil	GWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0062388_1003532782	3300004635	Bog Forest Soil	SSFASGAMLSGAGWIMVQIAIVPFVVVAGVTVLWWRHRDASGTAMLRPAEPV*
Ga0066671_100634763	3300005184	Soil	FASGAMLSGAGWITVQIAVMPFVVIAGIAVLWWRHRDANGTAMLRPAAPV*
Ga0065712_106613263	3300005290	Miscanthus Rhizosphere	FASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPM*
Ga0066388_1067620981	3300005332	Tropical Forest Soil	MLSGAGWILVQIAVMPFVVVAGAAVLWWRYRDANGTAILRPAEPM*
Ga0008090_100374541	3300005363	Tropical Rainforest Soil	WIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0070714_1001621563	3300005435	Agricultural Soil	MLSGAGWILVQIAVMPFVLVAGAAVLWWRYRDASGTAMLRPAEPV*
Ga0070713_1004394811	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV*
Ga0070681_114994011	3300005458	Corn Rhizosphere	MLSGAGWIMVQIAVMPFVMVAVAAVLWRRHCDARGSAMLHPAEPV*
Ga0070672_1004921702	3300005543	Miscanthus Rhizosphere	LSGAGWIMVQIAVMPFVIVAGVAVLWWRYRDANGTAMLRPAEPV*
Ga0068855_1019064212	3300005563	Corn Rhizosphere	MVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0066708_103949603	3300005576	Soil	MLSGAGWITVQIAVMPFVVIAGIAVLWWRHRDANGTAMLRPAAPV*
Ga0066903_1062298301	3300005764	Tropical Forest Soil	AMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0068860_1007183942	3300005843	Switchgrass Rhizosphere	GWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0070717_110022211	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV*
Ga0066696_107381411	3300006032	Soil	MVQIVVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0070715_100221403	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0070712_1007469841	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	WILVQIAVIPFVVVAGAAVLWWRYRDANGTAILRPAEPV*
Ga0074059_119463702	3300006578	Soil	SGAGWIMVQIAVVPFVVVAGVAVLWWRHHDASGTAMLRPAEPV*
Ga0074062_100379322	3300006606	Soil	VQIAVVPFVVVAGVAVLWWRHHDASGTAMLRPAEPV*
Ga0075425_1005883372	3300006854	Populus Rhizosphere	SSFASGAMLSGAGWILVQIAVIPFVVVAGAAVLWWRYRDANGTAILRPAEPV*
Ga0075424_1014213621	3300006904	Populus Rhizosphere	GWIMVQIAVVPFVVVAGAAVLWWRHRDASGTAMLRPAEPV*
Ga0079219_108061052	3300006954	Agricultural Soil	SFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0105240_106805391	3300009093	Corn Rhizosphere	GWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPA*
Ga0105241_120111203	3300009174	Corn Rhizosphere	MVQIAVMPFVVVAVVAVLWWRQRNASGTAMLRPAEPV*
Ga0105237_106910011	3300009545	Corn Rhizosphere	IAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV*
Ga0126314_104640621	3300010042	Serpentine Soil	LSSFPSGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPM*
Ga0126310_114648953	3300010044	Serpentine Soil	VQIAVMPFVVVAGVAVLWWRQRDASGTAMLRPAEPV*
Ga0126384_103336941	3300010046	Tropical Forest Soil	MLSGAGWILVQIAVMPFVVVAGAAVLWWRYRDANGTAILRPAEPV*
Ga0126384_113488202	3300010046	Tropical Forest Soil	ASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASDTAMLRPAEPV*
Ga0074045_110582861	3300010341	Bog Forest Soil	LSSFASGAMLSGAGWIMVQIAVIPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0126370_111447141	3300010358	Tropical Forest Soil	AMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRSAEPV*
Ga0126379_107444942	3300010366	Tropical Forest Soil	VLVRLGAMLSGAGWILVQIAVMPFVMVAGAAVLWWRYRNASGTAMLRPAEPV*
Ga0126379_116000512	3300010366	Tropical Forest Soil	VTLSSFASGAMLSGAGWIMVQIAVVPFVGVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0134125_116833681	3300010371	Terrestrial Soil	MLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0134128_122598012	3300010373	Terrestrial Soil	WMMVQIAVVPFVVVAGLAVLWWRHRDARGTAMLRPAEPV*
Ga0126381_1005419731	3300010376	Tropical Forest Soil	LSGAGWIIVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0126381_1022023412	3300010376	Tropical Forest Soil	VTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPA*
Ga0126381_1024031912	3300010376	Tropical Forest Soil	MLSGAGWIMVQIAVVPFVLVAGVAVLWWRHRDASSTAMLRPAEPV*
Ga0126381_1037420211	3300010376	Tropical Forest Soil	SGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0134122_125457541	3300010400	Terrestrial Soil	GAGWIMVQIAVMPFVMVAGVAVLWWRYHDANGTAMLRTAEPV*
Ga0164304_107198701	3300012986	Soil	IAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0182008_107041512	3300014497	Rhizosphere	GAMLSGAGWILVQIAVIPFVVVAGAAVLWWRYRDANGTAILRPAEPV*
Ga0132256_1021295412	3300015372	Arabidopsis Rhizosphere	LSGAGWIMVQIAVLPFVVVAGVAVLWWRHRDASGTAMLRPAEPV*
Ga0132257_1023344471	3300015373	Arabidopsis Rhizosphere	QIEVTPFVVVAGVAVLWWRHRDASGTAMLRPSEPV*
Ga0132255_1035302662	3300015374	Arabidopsis Rhizosphere	VTLSSFASGAMLSGAGWMMVQIAVMPFVVVAGLAVLWWRHRDANGTAMLRPAEPV*
Ga0182040_103572781	3300016387	Soil	SFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0182039_105086312	3300016422	Soil	SGAMLSGAGWIVVRIAVVPFVVVAVAAVLWWRHRDASGTAMLRPAEPV
Ga0182039_112431451	3300016422	Soil	TVTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGGAVLWWCHRDASGTAILRPVEPV
Ga0182038_100635621	3300016445	Soil	TLSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDPSATAMLRPAEPV
Ga0182038_118912832	3300016445	Soil	SFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHHDASGTAMLRPAEPV
Ga0163161_106325062	3300017792	Switchgrass Rhizosphere	AMLSGAGWIMVQIAVMPFVVAAGVAVLWWRHRDASGTAMLRPAEPV
Ga0187779_111173352	3300017959	Tropical Peatland	SSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0187781_103069712	3300017972	Tropical Peatland	IMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0187780_114732122	3300017973	Tropical Peatland	FGTVTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGGTVLWWRHRDASGTAMLRPAAPG
Ga0173479_106166062	3300019362	Soil	AMLSGAGWIMVQIAVMPFVVVAAVAVLWWRYRDANGTAMLRPAEPV
Ga0193729_12467271	3300019887	Soil	AMLSGAGWIMVQIAVMPFVVVAGVAVLWWRYRDANGTAMLRPAEPG
Ga0210399_104298712	3300020581	Soil	SSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0210401_115235451	3300020583	Soil	ASGAMLSGAGWIMVQIAVVPFVVVAGVVVLWWRHRDASGTAMLRPAEPV
Ga0210406_111249902	3300021168	Soil	GAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0210405_104110981	3300021171	Soil	SSFASGAMLSDAGWIMVQIAVVPFVVVAGATVLWWGHRNASGTALLRPAEPV
Ga0210405_106007421	3300021171	Soil	LSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0210397_100404531	3300021403	Soil	MLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0210397_112981621	3300021403	Soil	SGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0210389_103746384	3300021404	Soil	GAMLSGAGWIMVQIAVVPFVVVAGATVLWWGHRNASGTALLRPAEPV
Ga0210386_105354083	3300021406	Soil	SFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0210394_111598391	3300021420	Soil	TLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0126371_117504401	3300021560	Tropical Forest Soil	MVQIAVVPFVVVAGVAVLWWRHRDASATALLRPAEPV
Ga0126371_131331772	3300021560	Tropical Forest Soil	WGTGGIMEQIAVMRLLGVAGGAVLWWRHRDASGTAMLRPAEPV
Ga0126371_135891161	3300021560	Tropical Forest Soil	LSSFASGAMLSGAGWIMVQIAVMPFVVVAGVVMLWWRHRDASGTAMLRPAEPV
Ga0242656_11223282	3300022525	Soil	AGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0242675_10235872	3300022718	Soil	TVTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0207699_104097362	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0207660_110188832	3300025917	Corn Rhizosphere	MLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAERV
Ga0207700_106639762	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0207700_107336961	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0207700_113141581	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TVTLSSFASGAMLSGAGWIMVQVAVIPFVVIAGVAVLWWRHRDASSTATLRSAEPL
Ga0207665_103316012	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TLSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0207712_113223831	3300025961	Switchgrass Rhizosphere	SGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0209265_11155321	3300026308	Soil	GTVTLSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0209474_102502462	3300026550	Soil	MVQIVVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0208603_10618991	3300027109	Forest Soil	GAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0209418_10153561	3300027371	Forest Soil	SSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0209693_100182891	3300027855	Soil	GWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0268266_103235541	3300028379	Switchgrass Rhizosphere	IMVQIAVMPFVVVAGVAVLWWRHRDASGTAMLRPAEPM
Ga0222749_107368712	3300029636	Soil	GWIMVQVAVIPFVVIAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318516_100169001	3300031543	Soil	VTLSSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDPSATAMLRPAEPV
Ga0318534_103887372	3300031544	Soil	FASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318538_100515863	3300031546	Soil	LSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0318528_104176521	3300031561	Soil	TFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318528_106148051	3300031561	Soil	SSFASGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDPSATAMLRPAEPV
Ga0310686_1032589662	3300031708	Soil	WIMVQIAVVPFVLIAGVTVLWWRHRDASGTAMLRPAEPV
Ga0318493_101841291	3300031723	Soil	LSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0318493_103076042	3300031723	Soil	TFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPL
Ga0318500_101933241	3300031724	Soil	SGAMLSGAGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0306918_112958323	3300031744	Soil	AMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTALLRPAEPV
Ga0318502_107042952	3300031747	Soil	VTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRNRDASGAAMLRPAAEPL
Ga0307477_103133462	3300031753	Hardwood Forest Soil	SSFASGAMVSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318535_105480142	3300031764	Soil	ASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0318547_100881844	3300031781	Soil	GWIMVQIAVVPFVVVAGVAVLWWRNRDASGAAMLRPAAEPL
Ga0318547_103174192	3300031781	Soil	LSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318503_100826302	3300031794	Soil	IMVQIAVVPFVVVAGVAVLWWRHHDASGTAMLRPAEPV
Ga0318557_100083604	3300031795	Soil	SGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0318576_103952701	3300031796	Soil	GWIMVQIAVMPFVLVAGAAVLWWRHRDASGTAMLRPAEPV
Ga0318550_100958751	3300031797	Soil	VTLSTFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPL
Ga0318550_103900201	3300031797	Soil	AGWIMVQIAVMPFVVVAGVAVLWWRHRDASATAMLRPAEPV
Ga0318523_100940614	3300031798	Soil	MLSGAGWIMVQIAVVPFVVVAGVAVLWWRNRDASGAAMLRPAAEPL
Ga0310917_106080901	3300031833	Soil	MLSGAGWIMVQIAVVPFVVIAGVAVLWWRHRDASGTAMLRPAEPV
Ga0306919_104204842	3300031879	Soil	QIAVMPFVVVAGVAVLWWRHRDPSATAMLRPAEPV
Ga0306925_103430164	3300031890	Soil	GAGWIMVQIAVVPFVVVAGVAVLWWRNRDASGAAMLRPAEPL
Ga0306925_109126192	3300031890	Soil	SFASGAMLSGAGWIMVQIVVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318520_107126972	3300031897	Soil	GWIMVQIVVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0306923_102677211	3300031910	Soil	MVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0306923_105741422	3300031910	Soil	MLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0306923_117804021	3300031910	Soil	SGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAILRPVEPV
Ga0306921_103120711	3300031912	Soil	FASGAMLSGAGWIMVQIAVVPFVLVAGVAVLWWRHRDASGAAMLRPAEPV
Ga0306921_105873573	3300031912	Soil	FASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTALLRPAEPV
Ga0306921_110591101	3300031912	Soil	TVTLSSFASGAMLSGAGWIMVQIVVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0310912_103251861	3300031941	Soil	GAMLSGAGWIMVQIAVMPFVLVAGAAVLWWRHRDASGTAMLRPAEPV
Ga0310916_104999962	3300031942	Soil	WIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0310916_108931872	3300031942	Soil	SSFASGAMLSGAGWITVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0310913_101349693	3300031945	Soil	SGAGWIMVQIAVVPFVVVAGVAVLWWRNRDASGAAMLRPAEPL
Ga0310910_106237422	3300031946	Soil	FASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPL
Ga0318532_100145971	3300032051	Soil	SGAGWIMVQIAVMPFVVVAGVAVLWWRHRDPSATAMLRPAEPV
Ga0318575_106032722	3300032055	Soil	TVTLSSFASGAMLSGAGWIMAQIVVVPFVVVAGVAVLWWRHRDASGTAMLRAAEPV
Ga0318533_102557105	3300032059	Soil	VQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0318504_100382141	3300032063	Soil	TVTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0318510_102757801	3300032064	Soil	VTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0306924_116291682	3300032076	Soil	VTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGGAVLWWRHRDASGTAILRPVEPV
Ga0318525_102414722	3300032089	Soil	IMVQIAVVPFVVVAGVAVLWWRHRDASATAILRPAEPV
Ga0318577_105165992	3300032091	Soil	MLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPVEPV
Ga0318540_105295112	3300032094	Soil	GTVTLSSFASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV
Ga0310914_113435592	3300033289	Soil	SGAMLSGAGWIMVQIAVVPFVVIAGVAVLWWRHRDASGTAMLRPAEPV
Ga0310914_115540572	3300033289	Soil	GTVTLSSFASGAMLTGAGWIMVQIAVVPFVVVAGGAVLWWRHRDASGTAMLRPVEPV
Ga0318519_101031961	3300033290	Soil	AGWIMVQIAVVPFVVGAVAAVLWWRHRDASGTAMLRPAEPV
Ga0318519_103562621	3300033290	Soil	IMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPL
Ga0318519_104811271	3300033290	Soil	SSLASGAMLSGAGWIMVQIAVVPFVVVAGVAVLWWRHRDASGTAMLRPAEPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055254

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences