Metagenome / Metatranscriptome Family F055222

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055222
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	56 residues
Representative Sequence	ERVDSDHALGDSLGVKVTPTLFINNHPVDPQEKNPEGVRAAINAALEEKSKSGA
Number of Associated Samples	118
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	93.53 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.986 % of family members)
Environment Ontology (ENVO)	Unclassified (29.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.763 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.02% β-sheet: 4.88% Coil/Unstructured: 56.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF07884	VKOR	61.87
PF00072	Response_reg	7.91
PF13462	Thioredoxin_4	6.47
PF13366	PDDEXK_3	5.76
PF00486	Trans_reg_C	5.04
PF02518	HATPase_c	2.88
PF05635	23S_rRNA_IVP	1.44
PF13620	CarboxypepD_reg	0.72
PF01797	Y1_Tnp	0.72
PF01370	Epimerase	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG4243	Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formation	General function prediction only [R]	61.87
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	22.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	10.07 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	8.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.07 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	8.63 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.07 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	8.63 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.07 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	8.63 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.07 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7.91 %
Saccharopolyspora rectivirgula	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10974069	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300000955\|JGI1027J12803_102245835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300000955\|JGI1027J12803_102906720	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300002128\|JGI24036J26619_10005118	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300002899\|JGIcombinedJ43975_10029574	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300004479\|Ga0062595_102599793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	507	Open in IMG/M
3300005172\|Ga0066683_10857849	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005186\|Ga0066676_10355455	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005187\|Ga0066675_10519338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300005289\|Ga0065704_10791938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300005327\|Ga0070658_10966810	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005332\|Ga0066388_104364827	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005365\|Ga0070688_100090016	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300005366\|Ga0070659_101760496	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005445\|Ga0070708_101441822	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005447\|Ga0066689_10822542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300005553\|Ga0066695_10430170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300005555\|Ga0066692_10165376	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005568\|Ga0066703_10399491	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005598\|Ga0066706_10208431	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005598\|Ga0066706_11343488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300005618\|Ga0068864_100720344	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005764\|Ga0066903_100276419	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300005764\|Ga0066903_100633148	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300005983\|Ga0081540_1087205	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300006163\|Ga0070715_10784131	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006175\|Ga0070712_101149373	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006791\|Ga0066653_10255175	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300006796\|Ga0066665_10882711	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300006797\|Ga0066659_10284597	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006800\|Ga0066660_10581843	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006854\|Ga0075425_100979954	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300006871\|Ga0075434_101646496	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300007255\|Ga0099791_10302981	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300007255\|Ga0099791_10513405	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300007788\|Ga0099795_10289323	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300009012\|Ga0066710_101975642	Not Available	867	Open in IMG/M
3300009012\|Ga0066710_102539940	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300009012\|Ga0066710_102602216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	727	Open in IMG/M
3300009038\|Ga0099829_11431425	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009137\|Ga0066709_101706673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300009137\|Ga0066709_102918798	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009156\|Ga0111538_10679782	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300010036\|Ga0126305_10607706	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010046\|Ga0126384_10873062	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300010046\|Ga0126384_12008336	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010304\|Ga0134088_10135318	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300010321\|Ga0134067_10159257	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300010329\|Ga0134111_10464596	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010360\|Ga0126372_11923052	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010361\|Ga0126378_10427482	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300010376\|Ga0126381_103204695	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300010399\|Ga0134127_11604557	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012198\|Ga0137364_10075426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2317	Open in IMG/M
3300012198\|Ga0137364_10600371	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012198\|Ga0137364_10942548	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012200\|Ga0137382_10690696	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012200\|Ga0137382_11251998	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012201\|Ga0137365_11293829	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012202\|Ga0137363_11252933	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012208\|Ga0137376_10605877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	947	Open in IMG/M
3300012349\|Ga0137387_10192000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1465	Open in IMG/M
3300012357\|Ga0137384_11446679	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012362\|Ga0137361_11951516	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012500\|Ga0157314_1029815	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012582\|Ga0137358_11018976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300012683\|Ga0137398_10582929	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012685\|Ga0137397_10118968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1945	Open in IMG/M
3300012685\|Ga0137397_10968904	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012915\|Ga0157302_10191268	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012929\|Ga0137404_10685362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	926	Open in IMG/M
3300012929\|Ga0137404_11402235	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012930\|Ga0137407_10276046	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300012944\|Ga0137410_11451789	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012958\|Ga0164299_11263283	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012960\|Ga0164301_11600296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012975\|Ga0134110_10134359	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012988\|Ga0164306_10619700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	850	Open in IMG/M
3300014150\|Ga0134081_10135098	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300014166\|Ga0134079_10053521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1427	Open in IMG/M
3300014969\|Ga0157376_10051478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3421	Open in IMG/M
3300014969\|Ga0157376_10316057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1483	Open in IMG/M
3300015245\|Ga0137409_10863400	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300015357\|Ga0134072_10003653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3217	Open in IMG/M
3300015358\|Ga0134089_10160129	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300015372\|Ga0132256_100056150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3677	Open in IMG/M
3300016387\|Ga0182040_11816797	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300018028\|Ga0184608_10128872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1078	Open in IMG/M
3300018051\|Ga0184620_10290083	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300018078\|Ga0184612_10094803	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300018433\|Ga0066667_10732264	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300018433\|Ga0066667_10758754	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018433\|Ga0066667_12127123	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300018468\|Ga0066662_12802871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300019866\|Ga0193756_1048942	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300019868\|Ga0193720_1010156	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300019869\|Ga0193705_1059657	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300019882\|Ga0193713_1187019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300019886\|Ga0193727_1163875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300019996\|Ga0193693_1062213	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300020018\|Ga0193721_1086738	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300020062\|Ga0193724_1014147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1696	Open in IMG/M
3300021080\|Ga0210382_10229490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	810	Open in IMG/M
3300021086\|Ga0179596_10152557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1100	Open in IMG/M
3300021560\|Ga0126371_12215349	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300022534\|Ga0224452_1006644	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300025271\|Ga0207666_1070096	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025898\|Ga0207692_10734696	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300025898\|Ga0207692_11108496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300025910\|Ga0207684_10556145	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300025910\|Ga0207684_11654196	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025915\|Ga0207693_10914615	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025925\|Ga0207650_11189004	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300025930\|Ga0207701_10520839	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300026116\|Ga0207674_11604046	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026308\|Ga0209265_1045449	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300026324\|Ga0209470_1158326	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300026326\|Ga0209801_1159831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	944	Open in IMG/M
3300026330\|Ga0209473_1288982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300026374\|Ga0257146_1018522	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300026542\|Ga0209805_1195249	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300026550\|Ga0209474_10470720	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026550\|Ga0209474_10687140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300026802\|Ga0207511_107466	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300028047\|Ga0209526_10763497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300030848\|Ga0075388_10559856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300031231\|Ga0170824_113092132	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031231\|Ga0170824_121506508	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031446\|Ga0170820_11202899	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300031545\|Ga0318541_10794080	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031679\|Ga0318561_10827474	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031744\|Ga0306918_10214473	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300031847\|Ga0310907_10729774	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031854\|Ga0310904_10560777	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031954\|Ga0306926_10129056	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300031954\|Ga0306926_10340964	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300032180\|Ga0307471_100278708	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300032261\|Ga0306920_100930031	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300033475\|Ga0310811_11171652	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.93%
Host-Associated	Host-Associated	10.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.33%
Plants	Host-Associated → Plants	10.07%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.60%
Sediment	Environmental → Aquatic → Sediment	2.88%
Freshwater	Environmental → Aquatic → Freshwater	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.98%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_109740691	3300000890	Soil	DMDSDKARERVDSDHALGDSLGIKLTPTLFINNRAVEPQEKSPEGVRAAISAALNEKPQS
JGI1027J12803_1022458351	3300000955	Soil	ADKARAESLGINLTPTLYINGQPLDPKDKNPEGVRAAINAALAGKPQA*PYRDFAPF
JGI1027J12803_1029067202	3300000955	Soil	RVDSDHALGDSLGIKVTPTMFINKRALEPQEKNPEGVRAAINAALNGKSQS*
JGI24036J26619_100051181	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	QAKARVDSDYARGESLGINLTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA*
JGIcombinedJ43975_100295741	3300002899	Soil	KKDMDSDKARERVDSDHGLGNSLGVKVTPTLFINNRPVEQQERNPEGLRAAISAALNEKQS*
Ga0062595_1025997931	3300004479	Soil	KDMDGDKVRERIDSDHALADFLGVKVTPTLFINNRAIDPKDKNPEGVRAAINAALEEKSKNGT*
Ga0066683_108578492	3300005172	Soil	KERVDSDHARGESLGIKITPTLFINNQPVEGRDKTPDGVRAAINAALAGKSQT*
Ga0066676_103554553	3300005186	Soil	ERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALEEKSKSGA*
Ga0066675_105193381	3300005187	Soil	KERVDSDHARGDSLGIKLTPTLFINNQPVEPKDKNPEGVRSAINAALEAKSKSGT*
Ga0065704_107919382	3300005289	Switchgrass Rhizosphere	HALGDSLGVTVTPTFFINNHPVDPKDKNPEGVRAAINAALEQKSKSGA*
Ga0070658_109668101	3300005327	Corn Rhizosphere	KDMDGEQAKARVDSDVARGESLEIKVTPTLYINGQPVDPKDKNPEGVHAAINAALAGKPPA*
Ga0066388_1043648271	3300005332	Tropical Forest Soil	RERVDSDHALGDSLGIKVTPTLFINNRPVEPEQKNPEGVRSAINAALEEKAKTGA*
Ga0070688_1000900164	3300005365	Switchgrass Rhizosphere	QAKARVDSDVARAESLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA*
Ga0070659_1017604961	3300005366	Corn Rhizosphere	DMDGEQAKARVDSDYARGESLGINLTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA
Ga0070708_1014418221	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALNEKSQS*
Ga0066689_108225422	3300005447	Soil	SDHARGDSLGVTMTPTFFINNQPVDPKNKNPEGVRAAINAALEEKSKSGA*
Ga0066695_104301701	3300005553	Soil	ERVDSDHARGDSLGIKLTPTLFINNQPVEPKDKNPEGVRSAINAALEAKLKSGT*
Ga0066692_101653761	3300005555	Soil	AKERVDSDHARGESLGIKVTPTFFINNQPVEPKDKTPEGVRAAINAALAEKSKSGA*
Ga0066703_103994913	3300005568	Soil	DKARERVDSDHALGDSLGIKVTPTLFINKRPLESQEKNPEGLRAAINAALEEKSKSGA*
Ga0066706_102084311	3300005598	Soil	KARVDSDYARGESLGIKVTPTLYINGQPVDPKDKNPEGVRAAINAALEQKSKSGA*
Ga0066706_113434882	3300005598	Soil	DMDGEKARERVDSDHALGDSLGIKLTPTLYINNHPVDPKDKNPEGVRAAINAALEQKSKGGS*
Ga0068864_1007203441	3300005618	Switchgrass Rhizosphere	KDMDGDKAKERIDSDHALGDSLGIKVTPTMYINKRALEPYEKNPEGVRAAINAALNGKSQS*
Ga0066903_1002764191	3300005764	Tropical Forest Soil	QRVDSDHALGDSLGVKVTPTLFINNRPVDQQQKSPEGVRAAINAALSGKTQS*
Ga0066903_1006331481	3300005764	Tropical Forest Soil	VDSDHALGDSLGIKVTPTLFINNRPVEPEQKNPEGVRSAINAALEEKAKTGA*
Ga0081540_10872053	3300005983	Tabebuia Heterophylla Rhizosphere	IDSDQAVADSLGIKVTPTIFINKRALEPQEKNPEGIRAAINAALSGKSQS*
Ga0070715_107841311	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDSDKARERVDSDHARGDSLGISLTPTLFINNRSLDPQEKNPEGVRAAINAALKEKSQS*
Ga0070712_1011493731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KDMDSDKARERVDSDHALGDSLGIKVTPTLFINNHPVEPQEKSPEGVRAAINAVLSEKPQS*
Ga0066653_102551753	3300006791	Soil	DSDRALVDFLGVKLTPTPFINHQPVEPKDKTPEGVRAAINAALAPKSKSGT*
Ga0066665_108827111	3300006796	Soil	RVDSDHARGESLGIKVTPTLFINNHPVDPKDKNPEGVRAAINAALEQKSKSGS*
Ga0066659_102845973	3300006797	Soil	KKDIDGDKARERVDSDRALADFLGVKATPTLFINNRPVEPKDKNPEGVRAAINAALNEKSQS*
Ga0066660_105818431	3300006800	Soil	DKARERVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNEKSQS*
Ga0075425_1009799541	3300006854	Populus Rhizosphere	DSDKAKERIDSDHARGDSLGIKMTPSLYINDQPIDGKDKNPAGVRAAINAALEAKSKGGA
Ga0075434_1016464961	3300006871	Populus Rhizosphere	DKVRERIDSDHALADFLGVKVTPTLFINNRAIDPKDKNPEGVRAAINAALEEKSKNGT*
Ga0099791_103029811	3300007255	Vadose Zone Soil	RVDADHARGESLGIKVTPTLFINNQPVDPKDKNPEGVRAAINAALEQKSKSGA*
Ga0099791_105134052	3300007255	Vadose Zone Soil	DSDHALGDSLGIKVTPTLFINKRPMEPQEKNPEGVRAAINAVLEEKSKSGA*
Ga0099795_102893231	3300007788	Vadose Zone Soil	SDKARERVDSDHALADSLGIKVTPTLFINKRPMEPQEKNPEGVRAAINAALNQKSQS*
Ga0066710_1019756422	3300009012	Grasslands Soil	HPLGDSLAITLTPTLFINNHPVDPKDKNPEGVRAAINAALEQKSKGGS
Ga0066710_1025399401	3300009012	Grasslands Soil	AKERVDSDHARGESLGIKVTPTLFINNQPVEPKDKTPEGVRAAINAALAEKSKSGA
Ga0066710_1026022161	3300009012	Grasslands Soil	MDSEKVKERVDSDQALGDSLGIKLTPTLFINNHPVDPKDKNPEGIRAAINAALEQKSKSG
Ga0099829_114314251	3300009038	Vadose Zone Soil	DKVKQKLDSDRALGDSLGIKVTPMLFINNRPLEPQQKNPEGVRAAINAALNQKSQS*
Ga0066709_1017066731	3300009137	Grasslands Soil	DGEQAKARVDSDYARGESLGIKVTPTLYINGQPVDPKDKNPEGVRAAINAALEQKSKSGA
Ga0066709_1029187982	3300009137	Grasslands Soil	KARERVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNEKSQS*
Ga0111538_106797823	3300009156	Populus Rhizosphere	SDKARERVDSDHALGDSLGIKVTPTLFINNRPVEQQQKNPDGLRAAINAALEEKSKSGG*
Ga0126305_106077061	3300010036	Serpentine Soil	RERLDSDHALADFLGVKVTPTVFINNRPVDPQQKNPEGVRAAINAALEEKSKSGA*
Ga0126384_108730621	3300010046	Tropical Forest Soil	KKDMDSDKAKERVDSDHALGDSLGIKVTPTLFINKRAMEPQEKNPEGVRGAINAALSGKSQS*
Ga0126384_120083361	3300010046	Tropical Forest Soil	MDGEKTKERVESDRQRGESLGIQTTPTLFINNQPVDQKDRNPEGIRAEINAALEKKSRT*
Ga0134088_101353181	3300010304	Grasslands Soil	SEKVKARVESDQALGDSLGIKLTLTLFINNHPVDPKDKNPEGVRAAINAALEQKSKSGS*
Ga0134067_101592572	3300010321	Grasslands Soil	MDSEKARERVDSDHALGDSLGIKVTPTLFINKRPLESQEKSPEGVRAAINAALEEKSKSGA*
Ga0134111_104645961	3300010329	Grasslands Soil	MDGDKARERVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNQKSQS*
Ga0126372_119230521	3300010360	Tropical Forest Soil	DKARERVDSDHALGDSLGIKVTPTLFINKRPVEQQQKNPEGLRAAINAALEEKSKTGA*
Ga0126378_104274821	3300010361	Tropical Forest Soil	KAKERIDSDHALGDFLGVKVTPTLFINNRPLEPQEKNPEGVRAAINAALTEKTQS*
Ga0126381_1032046952	3300010376	Tropical Forest Soil	VDSDHALGDSLGIKVTPTLFINNRPVEPQEKNPEGLRATINAALKEKSQS*
Ga0134127_116045573	3300010399	Terrestrial Soil	DSDVARAESLEIKVTPSLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA*
Ga0137364_100754265	3300012198	Vadose Zone Soil	DMDGDKARERVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNQKSQS
Ga0137364_106003711	3300012198	Vadose Zone Soil	DKARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALNEKSQS*
Ga0137364_109425482	3300012198	Vadose Zone Soil	DKARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALEEKSKSGA*
Ga0137382_106906962	3300012200	Vadose Zone Soil	SDHALGDSLGIKVTPTLFINNRPMEPQEKNPEGVRAAINAALNEKSQS*
Ga0137382_112519982	3300012200	Vadose Zone Soil	SDHALGDSLGIKVTPTLFINNRPMEPQEKNPEGVRAAINAALEEKSKSGA*
Ga0137365_112938291	3300012201	Vadose Zone Soil	DSDQALGDSLGIKLTPTLFINKHPVDPKDKNPEGVRTAIDAALAGKSQT*
Ga0137363_112529332	3300012202	Vadose Zone Soil	DSDHARGESLGVKVTPTLYINGQPVDPKDKNPEGLRAAINAALEQKSKSGA*
Ga0137376_106058771	3300012208	Vadose Zone Soil	SDYARGESLGIKVTPTLYINGQPVDPKDKNPEGVRAAINAALEQKSKSGA*
Ga0137387_101920001	3300012349	Vadose Zone Soil	DMDSDKVRERIDSDRALADSLGIKVTPTLFINNRPVDPKDKNPEGVRAAINAALEEKSKSGA*
Ga0137384_114466792	3300012357	Vadose Zone Soil	DGDKARERVDSDRALADFLGVKATPTLFINNRPVEPKDKNPEGVRAAINAALNEKSQS*
Ga0137361_119515161	3300012362	Vadose Zone Soil	DMDSEKAKERVDSDHARGDSLGIKVTPTLFINDQPVEPQYKNPAGVRAAINAALEAKPKSGA*
Ga0157314_10298151	3300012500	Arabidopsis Rhizosphere	ARVDADFERAESLGIKVTPTLYINGQPLDPKDKNPEGVRAAINAVLAGTPHA*
Ga0137358_110189762	3300012582	Vadose Zone Soil	SDHARGESLGIKITPTLFINNQPVEGRDKTPDGVRAAINAALAGKSQT*
Ga0137398_105829292	3300012683	Vadose Zone Soil	DSDKARERVDSDHALGDSLGIKVTPTMFINKRPLEPQEKNPEGVRAAINAALNEKSQS*
Ga0137397_101189681	3300012685	Vadose Zone Soil	KFKKDRDGEQARARIDADRQRCESLGIQLTPTLFINNQPLDRKDKNPEGIRAEINAALEKKPQA*
Ga0137397_109689041	3300012685	Vadose Zone Soil	RVDSDYARGESLGIKLTPTLYINGQPVDPKDKSPEGVRAAINAALVGKPQA*
Ga0157302_101912681	3300012915	Soil	HALGDSLGIKLTPTLFINNRAVEPQEKSPEGVRAAISAALNEKPQS*
Ga0137404_106853621	3300012929	Vadose Zone Soil	KARERVDSDQARGLALGIKLTPTLFINNHPVDPKDKTPEGVRAAINAALEQKSKSGS*
Ga0137404_114022351	3300012929	Vadose Zone Soil	MDSDKARERVDSDHALGDSLGIKVTPTLFINNRPMEPQEKNPEGVRAAINAALNEKSQS*
Ga0137407_102760464	3300012930	Vadose Zone Soil	EKARERVDSDHALGDSLGVNVTPTFFINNHPVDPKDKNPEGVRAAINAALEQKSKSGA*
Ga0137410_114517892	3300012944	Vadose Zone Soil	DSEQAKARVDADRQRGESLGIQTTPTLFINNQPLDPKDKNPEGIRAEINAALEKKPQA*
Ga0164299_112632831	3300012958	Soil	DSDVARGESLEIKVTPTLYINGQPVDPKDKNPEGVHAAINAALAGKPPA*
Ga0164301_116002961	3300012960	Soil	DSEKAKERVDSDYARGDSLGIKVTPTLFINDQPVEPQDKNPAGVRAAINAALEAKPKSGA
Ga0134110_101343591	3300012975	Grasslands Soil	IDSEKVRERVDSDHARGDSLGIKLTPTLFINNQPVEPKDKNPEGVRSAINAALEAKSKSGT*
Ga0164306_106197001	3300012988	Soil	QAKARVDADVPRAESLEIKVTPTMYINGQPVDPKDKNTEGVRAAINAVLSGTPHA*
Ga0134081_101350982	3300014150	Grasslands Soil	MDSDKVRERIDSDRALADSLGIKVTPTLFINNHPVDPKDKNPEGVRAAINAALEEKSKSGA*
Ga0134079_100535213	3300014166	Grasslands Soil	SDHALGDSLGIKVTPTLFINKRPMEPQEKNPEGVRGAINAALNGKSQS*
Ga0157376_100514784	3300014969	Miscanthus Rhizosphere	IDSDHALGDSLGIKVTPTMFINKRALEPYEKNPEGVRAAINAALNGKSQS*
Ga0157376_103160571	3300014969	Miscanthus Rhizosphere	KARVDSDVARAESLEIKVTPSLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA*
Ga0137409_108634001	3300015245	Vadose Zone Soil	EKAKERVDSDHARGDSLGIKVTPTLFINDQPVEPQYKNPAGVRAAINAALEAKPKSGA*
Ga0134072_100036531	3300015357	Grasslands Soil	RVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNEKSQS*
Ga0134089_101601291	3300015358	Grasslands Soil	DSEKSKERVDSDHARGESLGIKMTPTLYINNQPVEGRDKTPDGVRAAINAALVGKSQT*
Ga0132256_1000561501	3300015372	Arabidopsis Rhizosphere	RVDSDVARAESLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPQA*
Ga0182040_118167971	3300016387	Soil	KTDMDSDKARERVDSDHALGDFLGVKVTPTLFINNRPVEQQQKNPEGVRAAINAALEEKSKSGA
Ga0184608_101288723	3300018028	Groundwater Sediment	DMDGEQARARVDADRQRGESLGIQTTPTLFINNQPLETKDKNPEGIRAEINAALEKKPQA
Ga0184620_102900831	3300018051	Groundwater Sediment	MDGEQARARVDADRQRGESLGIQLTPTLFINNQPLDPKDKNPEGIRAEINAVLEKKPQA
Ga0184612_100948034	3300018078	Groundwater Sediment	KDVDSDKARERVDSDHALGDSLGIKVTPTMFINNRPMEPQEKNPEGIRAAINAALKGKSQ
Ga0066667_107322641	3300018433	Grasslands Soil	KAKERVNSDHARGESLGINMTPTLYINNQPVEGRDKAPDGVRAAINAALVGKSQT
Ga0066667_107587541	3300018433	Grasslands Soil	DMDSDKARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALNQKSQS
Ga0066667_121271231	3300018433	Grasslands Soil	DMDSEKVKERVDSDQALGDSLGIKLTPTLFINNHPVDPKDKNPEGVRAAINAALEQKSKSGS
Ga0066662_128028712	3300018468	Grasslands Soil	DGEQARARVEADRQRGESLGINITPTLFINNQPLDPKDKNPEGIRAEINAALEKKPQA
Ga0193756_10489421	3300019866	Soil	RVDSDHALGDSLGVKVTPTLFINNRPVDPQEKNPESIRAAINAALEEKSKSGA
Ga0193720_10101562	3300019868	Soil	MDGEQAKARVDSDYARGESLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA
Ga0193705_10596571	3300019869	Soil	SDKVKQKVDSDRALGDSLGIKVTPMLFINNRPLEPQQKNPEGVRAAINAALNEKTQS
Ga0193713_11870192	3300019882	Soil	DSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALEEKSKSGA
Ga0193727_11638753	3300019886	Soil	DSDKARERVDSDHALGDSLGIKVTPTMFINNRPMEPQEKNPEGIRAAINAALEEKSKSGA
Ga0193693_10622132	3300019996	Soil	KDMESDKARGRVDSDHALGDFLGVKVTPTLFINNRPVDPQEKNPEGVRAAINAALAEKSKSGA
Ga0193721_10867381	3300020018	Soil	DQALGDSLGVKVTPTLFINNRPEDPQEKNPESIRAAINAALEEKSKSGA
Ga0193724_10141471	3300020062	Soil	KKDMDSDKARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALNEKSQS
Ga0210382_102294903	3300021080	Groundwater Sediment	ERVDSDHALGDSLGITLTPFLFINNHPVDPKDKNPEGVRAAINAALEQKSKSGS
Ga0179596_101525573	3300021086	Vadose Zone Soil	KDMDGDKARERVDSDRALADFLGVKATPTLFINNRPVDPKDKNPEGVRAAINAALNEKSQ
Ga0126371_122153491	3300021560	Tropical Forest Soil	RVDSDRALADFLGVKATPTLFINNRPVEPKDKNPEGVRAAINAALNEKSQS
Ga0224452_10066445	3300022534	Groundwater Sediment	DKARERVDSDHALADSLGIKVTPTLFINSHPLDPKDKNPEGVRAAINAALEQKSKSGA
Ga0207666_10700961	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	QAKARVDSDYARGESLGINLTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA
Ga0207692_107346961	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ERVDSDHALGDSLGVKVTPTLFINNHPVDPQEKNPEGVRAAINAALEEKSKSGA
Ga0207692_111084962	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SDKARERVDSDHALGDSLGIKVTPTMFINKRPLEPQEKNPEGVRAAINAALNEKSQS
Ga0207684_105561451	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FRKDIDSEKAKERVDSDHARGDSLGVKVTPTLFINNQPVEPKDKNPEGVRAAINAALEAKSKNGA
Ga0207684_116541961	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KARERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGVRAAINAALNEKSQS
Ga0207693_109146151	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DMDSDKARERVDSDHALGDSLGIKVTPTLFINNHPVEPQEKSPEGVRAAINAVLSEKPQS
Ga0207650_111890041	3300025925	Switchgrass Rhizosphere	DSDVARAESLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA
Ga0207701_105208393	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ARERVDSDHALGDSLGVSVTPTVFINNRPVNPYEKNPEGVRAAIKSALEEKPKSGA
Ga0207674_116040462	3300026116	Corn Rhizosphere	DSDHALGDSLGIKVTPTMFINKRALEPYEKNPEGVRAAINAALNGKSQS
Ga0209265_10454491	3300026308	Soil	VRGRIDSDRALADFLGVKATPTLFINNRALEPKDKNPEGVRAAINAALEQKLKNGT
Ga0209470_11583261	3300026324	Soil	DMDSDKAKERVDSDHALGDSLGIKVTPTMFINKRPMEPQEKNPEGIRAAINAALEEKSKSGA
Ga0209801_11598311	3300026326	Soil	ERVDSDQALGDSLGIKLTPTLFINNHPVDPKDKNPEGIRAAINAALEQKSKSGS
Ga0209473_12889822	3300026330	Soil	AKERVDSDHARGESLGIKITPTLFINNQPVEGRDKTPDGVRAAINAALAGKSQT
Ga0257146_10185223	3300026374	Soil	DGEQAKARVDSDYARAVSLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAALAGKPHA
Ga0209805_11952491	3300026542	Soil	DHALADSLGIKMTPTLFINNRPVDPKDKNPEGVRAEIKAALEEKSKNGA
Ga0209474_104707201	3300026550	Soil	EKARERVDSDHALGDSLGIKVTPTLFINKRPLESQEKSPEGVRAAINAALEEKSKSGA
Ga0209474_106871401	3300026550	Soil	EKAKERVDSDHARGESLGITMTPTLYINNQPVEGRDKSPEGVRAAINAALVGKSQT
Ga0207511_1074661	3300026802	Soil	VDSDYARGESLEIKLTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPHA
Ga0209526_107634971	3300028047	Forest Soil	KDIDGEKVRERVDADYARGESLGIKVTPTLFINNQPVDPKDKNPGGLRAAINAALEQKSKSGA
Ga0075388_105598562	3300030848	Soil	LNLDQFRKDIDGEKARERVDSDHALGDSLGITLTPTLFINNHPVDPKDKNPAGVHAAIDAALQEKSKSGA
Ga0170824_1130921321	3300031231	Forest Soil	DHALGDSLGIKVTPTLFINKRPMEPQEKNPEGIRAAINAALEEKSKSGA
Ga0170824_1215065082	3300031231	Forest Soil	SDHALGDSLGVKVTPTLFINNHPVDPQEKNPEGVRAAINAALEEKSKSGA
Ga0170820_112028993	3300031446	Forest Soil	GEQARNRVDADRQRGNSLGINITPTLFINNQPLDPKDKNPEGIRAEINAALEKKSQT
Ga0318541_107940802	3300031545	Soil	SDHALGDSLGIKVTPTLFINNRPVEQQQKNPDGLRAAINAALEEKSKTGA
Ga0318561_108274741	3300031679	Soil	VDSDHALGDSLGIKVTPTLFINNRPVEQQQKNPDGLRAAINAALEEKSKTGA
Ga0306918_102144731	3300031744	Soil	GEKARERVDSDHARGDSLGVKVTPTLFINNQPLEGKDKNPEGLRAAINAALAAKPKNGA
Ga0310907_107297742	3300031847	Soil	KKDMDGDKAKERIDSDHALGDSLGIKVTPTMFINKRALEPYEKNPEGVRAAINAALNGKSQS
Ga0310904_105607772	3300031854	Soil	GEKAKERIDSDHALGDSLGIKVTPTMFINKRALEPYEKNPEGVRAAINAALNGKSQS
Ga0306926_101290565	3300031954	Soil	DSDHALGDSLGIKLTPTLFINNHPVDPKDKTPEGVRAAIDAALAAKSQA
Ga0306926_103409641	3300031954	Soil	ERVDSDHALGDSLGIKVTPTLFINNRPVEQQQKNPDGLRAAINAALEEKSKTGA
Ga0307471_1002787084	3300032180	Hardwood Forest Soil	RERVDSDHALGDSLGIKVTPTLFINNHPVEPQEKSPEGVRAAINAVLSEKPQS
Ga0306920_1009300313	3300032261	Soil	ERVDSDHALGDSLGIKVTPTLFINKRAMEPQEKNPEGVRGAINAALSGKSQS
Ga0310811_111716522	3300033475	Soil	VDSDVARAESLEIKVTPTLYINGQPVDPKDKNPEGVRAAINAVLAGKPQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055222

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences