NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055192

Metagenome / Metatranscriptome Family F055192

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055192
Family Type Metagenome / Metatranscriptome
Number of Sequences 139
Average Sequence Length 43 residues
Representative Sequence GIEAVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Number of Associated Samples 117
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.12 %
% of genes from short scaffolds (< 2000 bps) 90.65 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.799 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(25.899 % of family members)
Environment Ontology (ENVO) Unclassified
(61.871 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.525 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.12%    β-sheet: 2.94%    Coil/Unstructured: 77.94%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF01555N6_N4_Mtase 10.07
PF05050Methyltransf_21 2.88
PF00924MS_channel 2.16
PF03721UDPG_MGDP_dh_N 1.44
PF03567Sulfotransfer_2 1.44
PF01041DegT_DnrJ_EryC1 1.44
PF07669Eco57I 0.72
PF00474SSF 0.72
PF03446NAD_binding_2 0.72
PF05118Asp_Arg_Hydrox 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 10.07
COG0863DNA modification methylaseReplication, recombination and repair [L] 10.07
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 10.07
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 2.16
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 2.16
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.44
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.44
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 1.44
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.44
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 1.44
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.44
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.44
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.44
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.44
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.44
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.44
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.80 %
All OrganismsrootAll Organisms48.20 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001346|JGI20151J14362_10156918All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005239|Ga0073579_1513492All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005512|Ga0074648_1100344All Organisms → Viruses → Predicted Viral1018Open in IMG/M
3300005914|Ga0075117_1032413Not Available1804Open in IMG/M
3300006164|Ga0075441_10267652Not Available627Open in IMG/M
3300006345|Ga0099693_1512151All Organisms → cellular organisms → Bacteria → Proteobacteria809Open in IMG/M
3300006352|Ga0075448_10222459Not Available575Open in IMG/M
3300006404|Ga0075515_10933353All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300006752|Ga0098048_1138516All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300006802|Ga0070749_10063015Not Available2234Open in IMG/M
3300006920|Ga0070748_1348272All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300009071|Ga0115566_10039814All Organisms → Viruses → Predicted Viral3272Open in IMG/M
3300009074|Ga0115549_1186144All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300009124|Ga0118687_10198444Not Available731Open in IMG/M
3300009172|Ga0114995_10260967Not Available956Open in IMG/M
3300009422|Ga0114998_10105326Not Available1387Open in IMG/M
3300009422|Ga0114998_10200738Not Available948Open in IMG/M
3300009423|Ga0115548_1137335All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300009423|Ga0115548_1282318All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300009433|Ga0115545_1076978Not Available1235Open in IMG/M
3300009436|Ga0115008_11342430All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45548Open in IMG/M
3300009438|Ga0115559_1090399Not Available1213Open in IMG/M
3300009472|Ga0115554_1256029All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300009476|Ga0115555_1128460All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300009526|Ga0115004_10191932Not Available1226Open in IMG/M
3300009526|Ga0115004_10276540Not Available998Open in IMG/M
3300009785|Ga0115001_10312242Not Available995Open in IMG/M
3300009785|Ga0115001_10322461Not Available976Open in IMG/M
3300009790|Ga0115012_10071515All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2371Open in IMG/M
3300009790|Ga0115012_10830086Not Available751Open in IMG/M
3300010149|Ga0098049_1210465Not Available595Open in IMG/M
3300010300|Ga0129351_1326474Not Available578Open in IMG/M
3300010368|Ga0129324_10201655Not Available808Open in IMG/M
3300011013|Ga0114934_10165462All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300012928|Ga0163110_10196279All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300012928|Ga0163110_11549462Not Available538Open in IMG/M
3300012936|Ga0163109_10713910Not Available733Open in IMG/M
3300012936|Ga0163109_10733280Not Available722Open in IMG/M
3300012954|Ga0163111_10160318Not Available1912Open in IMG/M
3300012954|Ga0163111_10705407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium952Open in IMG/M
3300016771|Ga0182082_1551858Not Available694Open in IMG/M
3300016797|Ga0182090_1054903Not Available535Open in IMG/M
3300017697|Ga0180120_10436720Not Available511Open in IMG/M
3300017714|Ga0181412_1115069Not Available624Open in IMG/M
3300017728|Ga0181419_1103524All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300017738|Ga0181428_1042422Not Available1058Open in IMG/M
3300017739|Ga0181433_1082296Not Available792Open in IMG/M
3300017746|Ga0181389_1111579Not Available747Open in IMG/M
3300017755|Ga0181411_1187537All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300017755|Ga0181411_1234981Not Available507Open in IMG/M
3300017756|Ga0181382_1134856Not Available652Open in IMG/M
3300017757|Ga0181420_1098521All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300017763|Ga0181410_1053052Not Available1241Open in IMG/M
3300017768|Ga0187220_1150128All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300017824|Ga0181552_10495766All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300017824|Ga0181552_10546471Not Available542Open in IMG/M
3300017949|Ga0181584_10848960All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300017952|Ga0181583_10234564Not Available1190Open in IMG/M
3300017952|Ga0181583_10349400Not Available930Open in IMG/M
3300017956|Ga0181580_10010631All Organisms → cellular organisms → Bacteria7365Open in IMG/M
3300017957|Ga0181571_10783286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium566Open in IMG/M
3300017958|Ga0181582_10057941All Organisms → cellular organisms → Bacteria2909Open in IMG/M
3300017958|Ga0181582_10825214Not Available550Open in IMG/M
3300017962|Ga0181581_10249222All Organisms → Viruses → Predicted Viral1157Open in IMG/M
3300017967|Ga0181590_10018469All Organisms → cellular organisms → Bacteria5653Open in IMG/M
3300017968|Ga0181587_10730576Not Available623Open in IMG/M
3300017969|Ga0181585_10231262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1312Open in IMG/M
3300018039|Ga0181579_10214193Not Available1122Open in IMG/M
3300018039|Ga0181579_10582469All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300018413|Ga0181560_10018623All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae5064Open in IMG/M
3300018413|Ga0181560_10404098Not Available627Open in IMG/M
3300018416|Ga0181553_10679532All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300018417|Ga0181558_10174346All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300018417|Ga0181558_10232203Not Available1039Open in IMG/M
3300018420|Ga0181563_10468880All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300018421|Ga0181592_11006906Not Available537Open in IMG/M
3300018424|Ga0181591_11131907Not Available525Open in IMG/M
3300018424|Ga0181591_11148750Not Available520Open in IMG/M
3300018426|Ga0181566_10572128All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300018428|Ga0181568_10499458Not Available969Open in IMG/M
3300019459|Ga0181562_10430164All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300020055|Ga0181575_10711526All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300020188|Ga0181605_10024541All Organisms → cellular organisms → Bacteria3751Open in IMG/M
3300020194|Ga0181597_10092723All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300020274|Ga0211658_1083943Not Available636Open in IMG/M
3300020297|Ga0211490_1071713Not Available585Open in IMG/M
3300020381|Ga0211476_10316518Not Available527Open in IMG/M
3300020388|Ga0211678_10313845All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300020403|Ga0211532_10128271All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300020428|Ga0211521_10338451All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300020430|Ga0211622_10136109All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300020437|Ga0211539_10326722Not Available637Open in IMG/M
3300020440|Ga0211518_10224853Not Available913Open in IMG/M
3300020440|Ga0211518_10323049All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300020457|Ga0211643_10547053All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage569Open in IMG/M
3300020461|Ga0211535_10429990Not Available601Open in IMG/M
3300020468|Ga0211475_10562102All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300020469|Ga0211577_10153132Not Available1552Open in IMG/M
3300020471|Ga0211614_10145869Not Available1016Open in IMG/M
3300020471|Ga0211614_10502385Not Available538Open in IMG/M
3300020474|Ga0211547_10383261Not Available709Open in IMG/M
3300020475|Ga0211541_10122106All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300021958|Ga0222718_10157052All Organisms → Viruses → Predicted Viral1278Open in IMG/M
3300021960|Ga0222715_10125629Not Available1623Open in IMG/M
3300021964|Ga0222719_10014865All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6333Open in IMG/M
3300021964|Ga0222719_10041769All Organisms → cellular organisms → Bacteria3538Open in IMG/M
3300022074|Ga0224906_1157573Not Available638Open in IMG/M
(restricted) 3300022931|Ga0233433_10406884Not Available533Open in IMG/M
3300022934|Ga0255781_10447050All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300022935|Ga0255780_10046112All Organisms → cellular organisms → Bacteria2883Open in IMG/M
3300023175|Ga0255777_10473721All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300023176|Ga0255772_10185266Not Available1198Open in IMG/M
3300024297|Ga0228658_1084350All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300024344|Ga0209992_10427204Not Available519Open in IMG/M
3300025098|Ga0208434_1043615All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300025120|Ga0209535_1130846All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300025137|Ga0209336_10086447All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300025168|Ga0209337_1111675Not Available1251Open in IMG/M
3300025276|Ga0208814_1108176Not Available687Open in IMG/M
3300025632|Ga0209194_1099012All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300025632|Ga0209194_1121321All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300025641|Ga0209833_1129286Not Available688Open in IMG/M
3300025652|Ga0208134_1112086All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300025696|Ga0209532_1218187Not Available531Open in IMG/M
3300025821|Ga0209600_1070073All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300025828|Ga0208547_1116557Not Available800Open in IMG/M
3300025840|Ga0208917_1006124All Organisms → cellular organisms → Bacteria → Proteobacteria5502Open in IMG/M
3300025886|Ga0209632_10027960All Organisms → cellular organisms → Bacteria3918Open in IMG/M
3300025889|Ga0208644_1229625Not Available783Open in IMG/M
3300025892|Ga0209630_10151169All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300026187|Ga0209929_1091738All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300027687|Ga0209710_1061664Not Available1637Open in IMG/M
3300027687|Ga0209710_1128715Not Available950Open in IMG/M
3300027714|Ga0209815_1179615Not Available662Open in IMG/M
3300027752|Ga0209192_10141597Not Available956Open in IMG/M
3300027791|Ga0209830_10118206Not Available1298Open in IMG/M
3300027791|Ga0209830_10192142Not Available956Open in IMG/M
3300031599|Ga0308007_10101935All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300031626|Ga0302121_10084734Not Available943Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh25.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine15.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine15.11%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine8.63%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater8.63%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.04%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater4.32%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.88%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.16%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.44%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.72%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.72%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.72%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.72%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.72%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.72%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.72%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.72%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005914Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006345Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075mEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300016771Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016797Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020188Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300020297Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX555970-ERR598979)EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020461Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)EnvironmentalOpen in IMG/M
3300020468Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020475Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300024297Seawater microbial communities from Monterey Bay, California, United States - 71DEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025821Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20151J14362_1015691813300001346Pelagic MarineIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED*
Ga0073579_151349213300005239MarineQGIEGVVDGDEMNQSGFTIWTYSPRDVVQEALKADGIELED*
Ga0074648_110034413300005512Saline Water And SedimentNVLKHTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED*
Ga0075117_103241313300005914Saline LakeIDCVVDGDEMNPASFTVWTYSPRDVVAKALQDNDIELED*
Ga0075441_1026765233300006164MarineVPSINAVLKNEGIDCVVDGDEMNQSGFTVWTYSPRDVVAKALQDNDIELEDY*
Ga0099693_151215133300006345MarineAVVDGDEMNQAGFTVWTYSPREVIEKALKDDGIDLED*
Ga0075448_1022245933300006352MarineGIDCVVDGDEMNQSGFTVWTYSPRDVVAKALQDNDIELEDY*
Ga0075515_1093335323300006404AqueousIVPSIHSALKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED*
Ga0098048_113851633300006752MarineVDGDEMNSASFTVWTYSPREVVEEALKADGIDLED*
Ga0070749_1006301533300006802AqueousGIEAVVDGDEMDQAGFTVWTYSPRVVVEEALKADGIELDG*
Ga0070748_134827223300006920AqueousIHSALKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED*
Ga0115566_1003981413300009071Pelagic MarineIVPSIHSALKRQGIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED*
Ga0115549_118614423300009074Pelagic MarineALKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED*
Ga0118687_1019844413300009124SedimentKHTGITAVVEGDEMNQAAFTAWTYPPREAVEQVLKEQGIELED*
Ga0114995_1026096713300009172MarineEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE*
Ga0114998_1010532613300009422MarineMTMLPSIKTLLQEVGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIGLEQ*
Ga0114998_1020073813300009422MarineGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE*
Ga0115548_113733513300009423Pelagic MarineIEGVVDGDEMNNASFTVWTYSPRVVVEEALKGDGIELED*
Ga0115548_128231823300009423Pelagic MarineIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED*
Ga0115545_107697833300009433Pelagic MarineSALKRQGIEGVVDGDEMNQSGFTVWTYSPREVIEQALKADGIELEE*
Ga0115008_1134243013300009436MarineNALKRQGIDCVVDGDEMNQAGFTVWTYSSRDVVEKALKDDGIDLDD*
Ga0115559_109039923300009438Pelagic MarineDCVVDGDEMNSAGFTVWTYSPRDVVAKALQDNDIELED*
Ga0115554_125602923300009472Pelagic MarineQGIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED*
Ga0115555_112846013300009476Pelagic MarineVPSIHSSLKSSGITAVVDGDEMNRASFTVWTYSPRVVVEEALKADGIDLED*
Ga0115004_1019193213300009526MarineSIKTILQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIGLEQ*
Ga0115004_1027654023300009526MarineSIKTILQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLIADGIDLE*
Ga0115001_1031224223300009785MarineLQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIGLEQ*
Ga0115001_1032246113300009785MarineLQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE*
Ga0115012_1007151553300009790MarineSLKASGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIELED*
Ga0115012_1083008613300009790MarineNSGITAVVDGDEMNSAGFTVWTYSPREVVRKALEDDGIDLDE*
Ga0098049_121046513300010149MarineKNSGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLDD*
Ga0129351_132647413300010300Freshwater To Marine Saline GradientTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED*
Ga0129324_1020165513300010368Freshwater To Marine Saline GradientKYAGITAVVDGDEMNQAGFTVWTYSPREVIEQALKADGIELED*
Ga0114934_1016546233300011013Deep SubsurfaceSLKASGITAVVDGDEMNSAGFTVWTYSPREVVEQALKDDGIELED*
Ga0163110_1019627943300012928Surface SeawaterVDGDEMNSAGFTVWTYSPRDIVAEALKADGIDLED*
Ga0163110_1154946223300012928Surface SeawaterAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIELED*
Ga0163109_1071391023300012936Surface SeawaterITAVVDGDEMNSAGFTVWTYSLRDVVEKALKDDGTDLED*
Ga0163109_1073328033300012936Surface SeawaterHSSLKASGITAVVDGDEMNSAGFTVWTYSPREVVEQALKDDGIDLED*
Ga0163111_1016031813300012954Surface SeawaterSGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLED*
Ga0163111_1070540743300012954Surface SeawaterLKASGITAVVDGDEMNSAGFTVWTYSPRDVVAKALEEDGIELED*
Ga0182082_155185833300016771Salt MarshVPSIHNVLKHSGITAVVDGDEMNQAGFTVWTYSPREVVEQALKADGIELEN
Ga0182090_105490323300016797Salt MarshVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0180120_1043672013300017697Freshwater To Marine Saline GradientIHNVLKHSGITAVVDGDEMNQAAFTVWTYSPREAVEQVLKEQGIDLED
Ga0181412_111506913300017714SeawaterHSSLKRQGIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED
Ga0181419_110352423300017728SeawaterKYSGITAVVDGDEMNSAGFTVWTYSPREVVRKALEDDGIQLDD
Ga0181428_104242233300017738SeawaterTCLKNSGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLDD
Ga0181433_108229633300017739SeawaterLKNSGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0181389_111157913300017746SeawaterIHTSLKASGITAVVDGDESNSAGFTVWTYSSRDVVEKALKDDGIDLED
Ga0181411_118753723300017755SeawaterVPSIHSSLKRQGIEGVVDGDEMNSAGFTVWTYSPREVVEQALKADGIDLED
Ga0181411_123498113300017755SeawaterPSIHTSLKASGITAVVDGDEMNSAGFTVWTYSPRDVVEKVLKDDGIDLED
Ga0181382_113485613300017756SeawaterITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLDD
Ga0181420_109852113300017757SeawaterIHSSLKASGITAVVDGDEMNSSGFTVWTYSPRDVVEEALKADGIELED
Ga0181410_105305243300017763SeawaterIHSALKRQGIDCVVDGDEMNQAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0187220_115012813300017768SeawaterVPSIHSALKRQGIEGVVDGDEMNQSGFTVWTYSPRDVVEEALKADGIELED
Ga0181552_1049576623300017824Salt MarshPSIHSSLKASGITAVVDGDEMNNASFTVWTYSPREVVEQALKADGIDLED
Ga0181552_1054647113300017824Salt MarshKNSGITAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0181584_1084896023300017949Salt MarshDAVVDGDEMNQAGFTVWTYSPREVVEEVLKADGIELED
Ga0181583_1023456423300017952Salt MarshSIVPEIHNVLKHTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0181583_1034940013300017952Salt MarshVVDGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0181580_10010631113300017956Salt MarshVDGDEMNSAGFTVWTYSPRVVVEEALKADGIELED
Ga0181571_1078328623300017957Salt MarshVLKNSGIDAVVDGDEMNQAGFTVWTYSPREVVEEVLKADGIELED
Ga0181582_1005794153300017958Salt MarshVPSIHSALKRQGIEGVVDGDEMNSAGFTVWTYSPRVVVEEALKADGIELED
Ga0181582_1082521413300017958Salt MarshIVPEIHNVLKHSGITAVVDGDEMNQAGFTVWTYSPREVVEQVLKEQGIELED
Ga0181581_1024922223300017962Salt MarshPEIHNVLKHSGITAVVDGDEMNQASFTVWTYSPREAVEQVLKEQGIELED
Ga0181590_1001846913300017967Salt MarshIEGVVDGDEMNSAGFTVWTYSPRVVVEEALKADGIELED
Ga0181587_1073057613300017968Salt MarshHSGITAVVDGDEMNQASFTVWTYSPREAVEQVLKEQGIELED
Ga0181585_1023126233300017969Salt MarshPSIHSALKRQGIAGVVDGDEMNSAGFTVWTYSPRVVVEEALKADGIELED
Ga0181579_1021419313300018039Salt MarshHNVLKHTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0181579_1058246923300018039Salt MarshKASGITAVVDGDEMNNASFTVWTYSPREVVEQALKADGIDLED
Ga0181560_1001862383300018413Salt MarshKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0181560_1040409823300018413Salt MarshVDGDEMNTASFTVWTYSPRVVVEEALKADGIELDG
Ga0181553_1067953223300018416Salt MarshVVDGDEMNQAGFTVWTYSPREVVEEVLKADGIELED
Ga0181558_1017434613300018417Salt MarshVVDGDEMNQAGFTVWTYSPREVVEEVLKADGIDLED
Ga0181558_1023220313300018417Salt MarshNSGITAVVDGDEMNSAGFTVWTYSPREVVEKALKDDGIDLED
Ga0181563_1046888023300018420Salt MarshVVDGDEMNQSGFTVWTYSPREVVVQALKDDGIDLED
Ga0181592_1100690623300018421Salt MarshSGITAVVDGDEMNQAAFTVWTYSPREVVEQVLKAEGIELDD
Ga0181591_1113190723300018424Salt MarshLKHSGITAVVDGDEMNQAAFTVWTYSPREVVEQVLKAEGIELDD
Ga0181591_1114875013300018424Salt MarshHTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0181566_1057212833300018426Salt MarshIIPSINTVLKNSGIDAVVDGDEMNQAGFTVWTYSPREVIEDVLKADGIDLED
Ga0181568_1049945833300018428Salt MarshVLKNSGIDAVVDGDEMNNASFTVWTYSPREVVEEVLKADGIELED
Ga0181562_1043016413300019459Salt MarshTAVVDGDEMNNASFTVWTYSPREVVEQALKADGIDLED
Ga0181575_1071152623300020055Salt MarshGIEAVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0181605_1002454113300020188Salt MarshLKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0181597_1009272313300020194Salt MarshIEGVVDGDEMNSASFTVWTYSPRTVVEEALKADGIELED
Ga0211658_108394333300020274MarineVVDGDEMNSAGFTVWTYSPREVVEKALKDDGIDLED
Ga0211490_107171313300020297MarineITAVVDGDEMNSAGFTVWTYSPREVVEKALKDDGIDLED
Ga0211476_1031651823300020381MarineTAVVDGDEMNSAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0211678_1031384523300020388MarineIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIDLED
Ga0211532_1012827113300020403MarineLDEDRSIVASINTVLKNSGIDAVVDGDEMNSASFTVWTYSPREVVEQALKDDGIDLED
Ga0211521_1033845123300020428MarineVDGDEMNSAGFTVWTYSPRGVIEQALKDDGIDLED
Ga0211622_1013610913300020430MarineSIHNSLKYAGITAVVDGDEMNSAGFTVWTYSPRDVVRQALEDDGIELEE
Ga0211539_1032672213300020437MarineASGIVATVDADEMNSAGFTVYTYSPREVVEKALKADGIEVDD
Ga0211518_1022485313300020440MarineVLKNSGITAVVDGDEMNQAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0211518_1032304923300020440MarineTAVVDGDEMNSAGFTVWTYSSRDVVEKALKADGIELED
Ga0211643_1054705313300020457MarineYAGITAVVDGDEMNSAGFTVWTYSPRDVVAKALEDDGIELED
Ga0211535_1042999033300020461MarineHSSLKASGITAVVDGDEMNQAGFTVWTYSPREVIEKALKDDGIDLED
Ga0211475_1056210233300020468MarineEGVVDGDEMNSAGFTVWTYSPRGVIEQALKDDGIELED
Ga0211577_1015313213300020469MarineDCVVDGDEMNQAGFTVWTYSPREAVEKALKDDGIDLED
Ga0211614_1014586913300020471MarineLKASGITAVVDADEMNSAGFTVYTYSPREVVEKALEQDGIDLED
Ga0211614_1050238513300020471MarineSGITAVVDGDEMNSAGFTVWTYSPREVVEKALKDDGIDLED
Ga0211547_1038326113300020474MarineVPSIHSVLKNSGITAVVDGDEMNSAGFTVWTYSPREVVEKALKDDGIDIED
Ga0211541_1012210643300020475MarineTCLKNSGITAVVDGDEMNSAGFTVWTYSPRDVVEKVLQDDGIELED
Ga0222718_1015705243300021958Estuarine WaterSIHSSLKRQGIEGVVDGDEMNSASFTVWTYSPRDVVAEALKADGIELED
Ga0222715_1012562933300021960Estuarine WaterIVPEIHNVLKHSGITAVVDGDEMNQASFTVWTYSPREAVEQVLKEQGIELE
Ga0222719_1001486513300021964Estuarine WaterTAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0222719_1004176973300021964Estuarine WaterAVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0224906_115757333300022074SeawaterVLKNSGITAVVDGDEMNQAGFTVWTYSPRDVVEKALKDDGIELED
(restricted) Ga0233433_1040688423300022931SeawaterSALKRQGIEGVVDGDEMNQAGFTVWTYSQREVVEQALKADGIDLED
Ga0255781_1044705023300022934Salt MarshGVVDGDEMNNASFTVWTYSPREVVEQALKADGIDLED
Ga0255780_1004611213300022935Salt MarshGIEGVVDGDEMNSAGFTVWTYSPRVVVEEALKADGIELED
Ga0255777_1047372123300023175Salt MarshGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0255772_1018526613300023176Salt MarshRSIVPEIHNVLKHTGITAVVEGDEMNQAAFTVWTYSPREAVEQVLKEQGIELED
Ga0228658_108435023300024297SeawaterSGITAVVDGDEMNQAGFTVWTYSPREVVEQVLKADGIDLED
Ga0209992_1042720413300024344Deep SubsurfaceCLKNSGITAVVDGDEMNTAGFTVWTYSPRDVVEKALKDDGIDLED
Ga0208434_104361523300025098MarineKRQGIEGVVDGDEMNQSGFTVWTYSPRVVVEEALKADGIDLED
Ga0209535_113084613300025120MarineGVVDGDEMNQTIFTVWTYSPRDVVEEALKADGIELED
Ga0209336_1008644713300025137MarineEGVVDGDEMNQTIFTVWTYSPRDVVEEALKADGIDLED
Ga0209337_111167543300025168MarineSIVPDINSALKRQGIDCVVDGDEMNQAGFTVWTYSPRDIVETALKDDGIELED
Ga0208814_110817643300025276Deep OceanINAVLKNEGIDCVVDGDEMNQSGFTVWTYSPRDVVAKALQDNDIELEDY
Ga0209194_109901213300025632Pelagic MarineIVPSIHSALKRQGIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED
Ga0209194_112132123300025632Pelagic MarineSLKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0209833_112928623300025641Pelagic MarineVDCVVDGDEMNSAGFTVWTYSPRDVVAKALQDNDIELED
Ga0208134_111208623300025652AqueousSIHSALKRQGIEGVVDGDEMNQSGFTIWTYSPRDVVQEALKADGIELED
Ga0209532_121818723300025696Pelagic MarineSIHSALKRQGIEGVVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0209600_107007313300025821Pelagic MarineIVPSIHSSLKRQGIEGVVDGDEMNNASFTIWTYSPRDVVAEALKADGIELED
Ga0208547_111655723300025828AqueousVLKHSGITAVVDGDEMNQAGFTVWTYSPREVVEQALKADGIELED
Ga0208917_100612483300025840AqueousHSALKRQGIEGVVDGDEMNTASFTVWTYSPRVVVEEALKADGIELED
Ga0209632_1002796073300025886Pelagic MarineVPSIHSALKRQGIEGVVDGDEMNNASFIVWTYSPRVVVQEALEADGIELED
Ga0208644_122962523300025889AqueousEAVVDGDEMDQAGFTVWTYSPRVVVEEALKADGIELDG
Ga0209630_1015116913300025892Pelagic MarineIEGVVDGDEMNNASFTVWTYSPRVVVEEALKADGIELED
Ga0209929_109173823300026187Pond WaterVDGDEMNSASFTVWTYSPRVVVEEALKADGIELED
Ga0209710_106166413300027687MarineGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIGLEQ
Ga0209710_112871513300027687MarineGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE
Ga0209815_117961513300027714MarineVPSINAVLKNEGIDCVVDGDEMNQSGFTVWTYSPRDVVAKALQDNDIELEDY
Ga0209192_1014159723300027752MarineEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE
Ga0209830_1011820623300027791MarineTILQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIGLEQ
Ga0209830_1019214213300027791MarineTILQKEGIDCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE
Ga0308007_1010193513300031599MarineDCVVDGDEMNQSGFTVWTYSPRDVVAKALQDNDIELEDY
Ga0302121_1008473423300031626MarineCVVDGDEMNPASFTVWTYSPRDVVEQTLMADGIDLE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.