Metagenome / Metatranscriptome Family F055162

Basic Information
Family ID	F055162
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	38 residues
Representative Sequence	LRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA
Number of Associated Samples	125
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	88.49 %
% of genes from short scaffolds (< 2000 bps)	89.21 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (94.964 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (9.352 % of family members)
Environment Ontology (ENVO)	Unclassified (23.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.396 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF12728	HTH_17	16.55
PF00589	Phage_integrase	12.95
PF08843	AbiEii	2.16
PF00069	Pkinase	2.16
PF00691	OmpA	1.44
PF02371	Transposase_20	0.72
PF05065	Phage_capsid	0.72
PF06537	DHOR	0.72
PF05227	CHASE3	0.72
PF00722	Glyco_hydro_16	0.72
PF13517	FG-GAP_3	0.72
PF13671	AAA_33	0.72
PF08448	PAS_4	0.72
PF10011	DUF2254	0.72
PF07676	PD40	0.72
PF12740	Chlorophyllase2	0.72
PF05101	VirB3	0.72
PF01548	DEDD_Tnp_IS110	0.72
PF03544	TonB_C	0.72
PF13620	CarboxypepD_reg	0.72
PF00027	cNMP_binding	0.72
PF13545	HTH_Crp_2	0.72
PF04542	Sigma70_r2	0.72
PF13602	ADH_zinc_N_2	0.72
PF05721	PhyH	0.72
PF02055	Glyco_hydro_30	0.72
PF07228	SpoIIE	0.72
PF03703	bPH_2	0.72
PF01168	Ala_racemase_N	0.72
PF00196	GerE	0.72
PF00860	Xan_ur_permease	0.72
PF13191	AAA_16	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	8.63
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	2.16
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.44
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.72
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.72
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.72
COG3702	Type IV secretory pathway, VirB3 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.72
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.10 %
Unclassified	root	N/A	5.04 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.11 %
Unclassified	root	N/A	5.04 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.39 %
Unclassified	root	N/A	5.04 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.39 %
Unclassified	root	N/A	5.04 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	5.04 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.88 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.72 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.72 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	5.04 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1.44 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.72 %
Rhodoferax sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax sediminis	0.72 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.72 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.72 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_56_16	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105205638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300001087\|JGI12677J13195_1011936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	603	Open in IMG/M
3300002245\|JGIcombinedJ26739_101652996	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300003505\|JGIcombinedJ51221_10030650	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300004092\|Ga0062389_103394672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300004463\|Ga0063356_104263115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	615	Open in IMG/M
3300004633\|Ga0066395_10311924	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300004643\|Ga0062591_101309327	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300005459\|Ga0068867_100130454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1953	Open in IMG/M
3300005468\|Ga0070707_101529057	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005553\|Ga0066695_10573936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	681	Open in IMG/M
3300005559\|Ga0066700_10195977	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005563\|Ga0068855_100499619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1322	Open in IMG/M
3300005591\|Ga0070761_10188306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300005764\|Ga0066903_101307961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1355	Open in IMG/M
3300005764\|Ga0066903_102061370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1097	Open in IMG/M
3300005840\|Ga0068870_11346009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	521	Open in IMG/M
3300006052\|Ga0075029_100757552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	658	Open in IMG/M
3300006052\|Ga0075029_100828159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	631	Open in IMG/M
3300006059\|Ga0075017_100142088	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300006059\|Ga0075017_100679900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	791	Open in IMG/M
3300006162\|Ga0075030_100830718	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300006162\|Ga0075030_101449308	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006172\|Ga0075018_10303092	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006174\|Ga0075014_100320126	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300006176\|Ga0070765_100077998	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300006176\|Ga0070765_100635781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300006893\|Ga0073928_10497066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300006954\|Ga0079219_10589394	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300009029\|Ga0066793_10526222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300009137\|Ga0066709_103623082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	560	Open in IMG/M
3300009519\|Ga0116108_1256768	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300009522\|Ga0116218_1327081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300009524\|Ga0116225_1447024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	574	Open in IMG/M
3300009637\|Ga0116118_1198471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300009646\|Ga0116132_1250694	Not Available	538	Open in IMG/M
3300009665\|Ga0116135_1139523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300010048\|Ga0126373_10367227	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456	Open in IMG/M
3300010048\|Ga0126373_11864258	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300010329\|Ga0134111_10094044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300010343\|Ga0074044_10821358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300010360\|Ga0126372_11850919	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010361\|Ga0126378_10313061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1675	Open in IMG/M
3300010361\|Ga0126378_10620323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300010362\|Ga0126377_12955626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300010366\|Ga0126379_12585926	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300010376\|Ga0126381_100045817	Not Available	5325	Open in IMG/M
3300010376\|Ga0126381_101270632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1064	Open in IMG/M
3300010376\|Ga0126381_104856689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300010379\|Ga0136449_101535123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300010379\|Ga0136449_102260137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300010398\|Ga0126383_13646054	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300010400\|Ga0134122_10168096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1796	Open in IMG/M
3300011269\|Ga0137392_11167407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300012200\|Ga0137382_10023515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3578	Open in IMG/M
3300012205\|Ga0137362_11524524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012210\|Ga0137378_11402972	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300012357\|Ga0137384_10546378	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300012363\|Ga0137390_11368173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012927\|Ga0137416_11756221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012964\|Ga0153916_12199497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012971\|Ga0126369_10306735	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300014054\|Ga0120135_1055169	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	621	Open in IMG/M
3300014155\|Ga0181524_10300987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	731	Open in IMG/M
3300014162\|Ga0181538_10596835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300014164\|Ga0181532_10048366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2820	Open in IMG/M
3300014164\|Ga0181532_10051368	All Organisms → cellular organisms → Bacteria → Acidobacteria	2722	Open in IMG/M
3300015358\|Ga0134089_10357521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300015371\|Ga0132258_10900830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2233	Open in IMG/M
3300015371\|Ga0132258_12153007	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300016357\|Ga0182032_10711097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300017823\|Ga0187818_10059433	All Organisms → cellular organisms → Bacteria → Acidobacteria	1644	Open in IMG/M
3300017934\|Ga0187803_10119762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300017961\|Ga0187778_10141710	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300017961\|Ga0187778_11295509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017970\|Ga0187783_10661472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300017972\|Ga0187781_10391500	Not Available	991	Open in IMG/M
3300017975\|Ga0187782_10590885	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300018005\|Ga0187878_1279281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300018006\|Ga0187804_10211230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	831	Open in IMG/M
3300018025\|Ga0187885_10073973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1694	Open in IMG/M
3300018040\|Ga0187862_10409786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300018090\|Ga0187770_11078079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300018433\|Ga0066667_11776060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300020581\|Ga0210399_10676233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300020583\|Ga0210401_11443032	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300021046\|Ga0215015_11090867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300021170\|Ga0210400_11156416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300021171\|Ga0210405_10018742	All Organisms → cellular organisms → Bacteria → Acidobacteria	5649	Open in IMG/M
3300021181\|Ga0210388_10923989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300021403\|Ga0210397_10459772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300021406\|Ga0210386_11236052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300021432\|Ga0210384_11039832	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300021560\|Ga0126371_10130675	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300021858\|Ga0213852_1171139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300022840\|Ga0224549_1029603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	744	Open in IMG/M
3300025627\|Ga0208220_1081694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300025878\|Ga0209584_10226375	Not Available	714	Open in IMG/M
3300025915\|Ga0207693_11043892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300025917\|Ga0207660_11185833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300025928\|Ga0207700_11231683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300025949\|Ga0207667_10598993	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300026023\|Ga0207677_12109539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300026291\|Ga0209890_10101135	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300026331\|Ga0209267_1228014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300026508\|Ga0257161_1012191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1571	Open in IMG/M
3300027825\|Ga0209039_10022759	All Organisms → cellular organisms → Bacteria	3156	Open in IMG/M
3300027853\|Ga0209274_10594891	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300027854\|Ga0209517_10283254	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300027908\|Ga0209006_10438696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax sediminis	1095	Open in IMG/M
3300028673\|Ga0257175_1117467	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028746\|Ga0302233_10427999	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300029817\|Ga0247275_1013931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2781	Open in IMG/M
3300029989\|Ga0311365_10996508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300029999\|Ga0311339_10035573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6994	Open in IMG/M
3300030000\|Ga0311337_10616850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300030007\|Ga0311338_10965790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300030114\|Ga0311333_10393130	Not Available	1120	Open in IMG/M
3300030520\|Ga0311372_10384473	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300030838\|Ga0311335_10570056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300030940\|Ga0265740_1043010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300030993\|Ga0308190_1165014	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300031090\|Ga0265760_10228704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300031708\|Ga0310686_116392842	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300031715\|Ga0307476_10446059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300031720\|Ga0307469_11017743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300031722\|Ga0311351_10514480	Not Available	909	Open in IMG/M
3300031820\|Ga0307473_10245178	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300031823\|Ga0307478_10542554	Not Available	971	Open in IMG/M
3300032001\|Ga0306922_11642773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	638	Open in IMG/M
3300032180\|Ga0307471_103480661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	557	Open in IMG/M
3300032261\|Ga0306920_102931534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300032805\|Ga0335078_10011473	All Organisms → cellular organisms → Bacteria	13140	Open in IMG/M
3300032805\|Ga0335078_12140821	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300032828\|Ga0335080_12040259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300032892\|Ga0335081_10003641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24257	Open in IMG/M
3300032897\|Ga0335071_10004727	All Organisms → cellular organisms → Bacteria	14216	Open in IMG/M
3300032954\|Ga0335083_10537098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_56_16	973	Open in IMG/M
3300033402\|Ga0326728_10814147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.24%
Host-Associated	Host-Associated	5.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.82%
Aquatic	Environmental → Aquatic	19.42%
Plants	Host-Associated → Plants	5.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.91%
Freshwater	Environmental → Aquatic → Freshwater	12.95%
Peat	Environmental → Terrestrial → Peat	7.91%
Sediment	Environmental → Aquatic → Sediment	5.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.79%
Loam	Environmental → Terrestrial → Soil → Loam	10.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.60%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.16%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.44%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1052056381	3300000955	Soil	VDLRTVQQGLGRSDMESTMRYLKPSRSEKVREKVNQIFA*
JGI12677J13195_10119362	3300001087	Forest Soil	VQQWLGHSDMESTMRYLKPSRSQHVREKVNGIFA*
JGIcombinedJ26739_1016529961	3300002245	Forest Soil	LQLWLGHSDTESTMRYLKPARGPLMREKVNEIFA*
JGIcombinedJ51221_100306503	3300003505	Forest Soil	MVTLGWRGLRTVQQWLGHSDMESTMRYLKPSRSQQVKEKVNEIFA*
Ga0062389_1033946722	3300004092	Bog Forest Soil	MRDLRTAQQWLGHSDMDSTMRYLKPSRSQLVRDKVNENV*
Ga0063356_1042631151	3300004463	Arabidopsis Thaliana Rhizosphere	ILRRLRTVQQWLGQSDMESTMRSLKPSRTQQAREKVHEVFA*
Ga0066395_103119241	3300004633	Tropical Forest Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSEYTRQKVNEIFR*
Ga0062591_1013093272	3300004643	Soil	VELRTVQQWLGHSDMESTMRYLEPSRSKQVREKVNEIFP*
Ga0068867_1001304542	3300005459	Miscanthus Rhizosphere	VELRTVQQWLGHSDMESTMRYLEPSRSKQVREKVDEIFP*
Ga0070707_1015290571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VDLRTVQNWLGHSDLESTMRYLKPSRNQAVQDKVNEIFT*
Ga0066695_105739361	3300005553	Soil	DLRTVQLWLGHKDLESTMRYLRPARGRAAREKVNNTFATA*
Ga0066700_101959771	3300005559	Soil	DLRTVQLWLGHKDLESTMRYLKPARGKGIRLKVNATFA*
Ga0068855_1004996191	3300005563	Corn Rhizosphere	VQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGVQ*
Ga0070761_101883063	3300005591	Soil	LRTVQSWMGHTDLQSTMRYLKPSRTQATRDKVNEIFAKVCK*
Ga0066903_1013079612	3300005764	Tropical Forest Soil	LWAGVDLWTVQQYLGHSDMESTMRYLKPSRSEKERDKVNQIFA*
Ga0066903_1020613702	3300005764	Tropical Forest Soil	VDLRTVQLWLGHSDIESTMRYLKPSRSPQVRDKVNEIFA*
Ga0068870_113460091	3300005840	Miscanthus Rhizosphere	VQQWLGHSDMESTMRYLKPSRSQKVREKVNEIFA*
Ga0075029_1007575522	3300006052	Watersheds	VQLWLGHKDLESTMRYLKPARGKEIRSKVDLTFATGAK*
Ga0075029_1008281591	3300006052	Watersheds	VQQWLGHSDMESTMRYLKPSRSQQTRDKVNEIFA*
Ga0075017_1001420881	3300006059	Watersheds	VQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA*
Ga0075017_1006799002	3300006059	Watersheds	TVQQWLGHSDMESTMRYLKPSRSQQTREKVNEIFA*
Ga0075030_1008307181	3300006162	Watersheds	VQQWLGHSDMESTMRHLKPSRSQQVRDKVNEIFA*
Ga0075030_1014493081	3300006162	Watersheds	VQQWLGHSDMESTMRYLKPSRSQRVRNKVNEIFG*
Ga0075018_103030921	3300006172	Watersheds	VQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA*
Ga0075014_1003201262	3300006174	Watersheds	VQLWLGHSDMESTMRYLNPLRSQHVRDKVNEIFA*
Ga0070765_1000779985	3300006176	Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQQTREKVNEIFAL*
Ga0070765_1006357811	3300006176	Soil	TVQQWLGHSDMESTMRYLKPSRSQHVREKVNEIFA*
Ga0073928_104970661	3300006893	Iron-Sulfur Acid Spring	TVQQWLGHSDMESTLRYLKPSRSQATRDKVNAIFA*
Ga0079219_105893942	3300006954	Agricultural Soil	TVQQWLGHTDMESTMRYLKPARNQVVRDKVNEIFA*
Ga0066793_105262222	3300009029	Prmafrost Soil	LRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGVQ*
Ga0066709_1036230821	3300009137	Grasslands Soil	VDLRTVQHWMGHKDIESTMRYLKPNRGQEVRAKVNNSFA*
Ga0116108_12567681	3300009519	Peatland	VDLRTVQRWLGHEDMESTMRYFKPSRSKATREKESEIFAD*
Ga0116218_13270811	3300009522	Peatlands Soil	VDLRTVQQWLGHSDMESTVRYLKPSRSQQTREKVNEIFA*
Ga0116225_14470241	3300009524	Peatlands Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQQTREKVNAIFA*
Ga0116118_11984712	3300009637	Peatland	VDLRTVLQWLGHKDLESTMRYLKPSRSQQTRDKVNEIFA*
Ga0116132_12506941	3300009646	Peatland	VDLRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFAL*
Ga0116135_11395231	3300009665	Peatland	DLRTVQQWLGHSDIESTMRYLKPSRSQATRDKVNEIFAD*
Ga0126373_103672271	3300010048	Tropical Forest Soil	GIDLRTVQAYLGHKDLESTMRYLKPSRTPKAREKINEVFA*
Ga0126373_118642581	3300010048	Tropical Forest Soil	VQHWFGHADLESTMRYLKPSRSQHVRDKMDTIFA*
Ga0134111_100940441	3300010329	Grasslands Soil	RTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA*
Ga0074044_108213582	3300010343	Bog Forest Soil	PHGSACWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA*
Ga0126372_118509192	3300010360	Tropical Forest Soil	VDLRTVQSWMGHTDLASTMRYLKPNHSQEVRVKVNNTFA*
Ga0126378_103130612	3300010361	Tropical Forest Soil	DLRTVQHWLGHTDIESTMRYLKPSRSQQVRDKMDEVFASPDFEIAS*
Ga0126378_106203231	3300010361	Tropical Forest Soil	LRTVQHWMGHKDLESTMRYLKPNRGPAVRDKVNATFAQ*
Ga0126377_129556261	3300010362	Tropical Forest Soil	RTVQQWLGHSDMESTMRYLKPSRSEKVREKVNDIFA*
Ga0126379_125859261	3300010366	Tropical Forest Soil	TVQQWLGHSDMESTMRYLKPSRSETVRDKINSIFA*
Ga0126381_1000458171	3300010376	Tropical Forest Soil	VDLRTVQQWLGHSDMESTMRYLKASRSEKVHDKVNPIFV*
Ga0126381_1012706321	3300010376	Tropical Forest Soil	DLRTVQLWLGHTEIESTMRYLKPSRSAETHRKVNEIFPSRKRLST*
Ga0126381_1048566891	3300010376	Tropical Forest Soil	TVQMWMGHTDIESTMRYLKPSRSQKMQEKVNEIFG*
Ga0136449_1015351231	3300010379	Peatlands Soil	RTVQQWLGHSDMESTMRYLKPSRSQHVREKVNEIFA*
Ga0136449_1022601372	3300010379	Peatlands Soil	LATVDLRTVQQWLGHSDMESTMRYLKPSRSKQTREKVNEIFAL*
Ga0126383_136460541	3300010398	Tropical Forest Soil	WAGVDLRTGQHWLGHSDMESTIRYLKTSRSEKVRDKVNQIFA*
Ga0134122_101680965	3300010400	Terrestrial Soil	RTVQQWLGHSGMESTMRYLKPSRSKQVREKVNEIFP*
Ga0137392_111674071	3300011269	Vadose Zone Soil	VQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGDQ*
Ga0137382_100235151	3300012200	Vadose Zone Soil	TVQLWLGHHDLKSTMRYLKPARGKNIRAKVNATFTD*
Ga0137362_115245242	3300012205	Vadose Zone Soil	DLRTVQHWMGHKDIESTMRYLKPNRSQEVKAKVNHTFA*
Ga0137378_114029721	3300012210	Vadose Zone Soil	LRTVQMWLGHSDMESTMRYLKPSRSQAVRDKVDETFA*
Ga0137384_105463783	3300012357	Vadose Zone Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGVQ*
Ga0137390_113681731	3300012363	Vadose Zone Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA*
Ga0137416_117562211	3300012927	Vadose Zone Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGDQ*
Ga0153916_121994971	3300012964	Freshwater Wetlands	DLRTVQQWMGHTDLESTLRYLKPNRSAAVRDKVNSMFDY*
Ga0126369_103067354	3300012971	Tropical Forest Soil	RTVQQWLGHSDMESTVRYLKPSRSEKRREKVNKIFA*
Ga0120135_10551691	3300014054	Permafrost	RTVQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA*
Ga0181524_103009872	3300014155	Bog	VDLRTVQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA*
Ga0181538_105968351	3300014162	Bog	HKDIESTMRYLKPARDAQSRAKVNDIFAFASENH*
Ga0181532_100483665	3300014164	Bog	AGVDLRSVQEWLGHSDMESTMRYLKPSRSQQTRDKVNEIFA*
Ga0181532_100513687	3300014164	Bog	DIRTVQSYLGHSDLESTLRYLKPSRSQATRDKVNEIFGEVLA*
Ga0134089_103575211	3300015358	Grasslands Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQQVRQKVNKIFA*
Ga0132258_109008301	3300015371	Arabidopsis Rhizosphere	PWAGVDHRTVQQWLGHSDMESTMRYLKPSRSEKVREKVNEIFA*
Ga0132258_121530073	3300015371	Arabidopsis Rhizosphere	VDLRTVQQWLGHSDMESTMRYLKPSRNRTVREKVNEIFA*
Ga0182032_107110972	3300016357	Soil	TVQQWLGHSDMESTMRYLKPSRSEKVREKVNQIFG
Ga0187818_100594332	3300017823	Freshwater Sediment	MGLERTVQLWMGHADMESTMRYLTPHRSQAVREKVNTMF
Ga0187803_101197623	3300017934	Freshwater Sediment	MGLERTVQLWMGHADMESTMRYLTPHRSQAVREKVNTML
Ga0187778_101417101	3300017961	Tropical Peatland	RTVQQWLGHSDMESTMRYLKPSRSEKVREKVNQIFA
Ga0187778_112955092	3300017961	Tropical Peatland	QLWLGHSDLESTMRYLKPSRSEQVQAKVNDTFSKMGAEA
Ga0187783_106614722	3300017970	Tropical Peatland	DLRTVQQWLGHSDMESTMRYLKPARDKKVHEKVNETFSKLI
Ga0187781_103915001	3300017972	Tropical Peatland	VRAVQQWLGHFDVESTMRYLKPARDKKVHEKVNETFSKLEFDWE
Ga0187782_105908852	3300017975	Tropical Peatland	VDLRTVQERMGRTDIESTMTYLKPNRNKAVRERVNETFAGRA
Ga0187878_12792811	3300018005	Peatland	RTVQQWMGHSDMESTMRYLKPNRSTAVRDKVNTIFGD
Ga0187804_102112303	3300018006	Freshwater Sediment	VQQWLGHSDMESTMRYLKPSRSQKVRDKVNEIFGGVNG
Ga0187885_100739733	3300018025	Peatland	DLRTVQQWLGHSDMESTMRYLKPSRSQQTREKVNEIFA
Ga0187862_104097861	3300018040	Peatland	DLRTVQQWLGHSDMESTMRYLKPSRSRIVSEKVNEIFG
Ga0187770_110780791	3300018090	Tropical Peatland	VQQWLGHSDMESTMRYLKPARNEAVRDKVNEIFGGKNGN
Ga0066667_117760601	3300018433	Grasslands Soil	DEYLRTIKQWLGYTDMESNMRYLKPSRSQQVREKVNEIFA
Ga0210399_106762331	3300020581	Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA
Ga0210401_114430321	3300020583	Soil	MSWAEVDLGTVQHWLGHSDMESTMRYLKPSRSEKAGEKVNEIFG
Ga0215015_110908671	3300021046	Soil	RTVQQWLGHSDMESTMRYLKPSRSQRVHAKVNEIFAL
Ga0210400_111564161	3300021170	Soil	DLRTVQQWLGHSDMESTMRYLKPSRSRHVRDKVNEIFA
Ga0210405_100187424	3300021171	Soil	MFYEMVIRQQWLGHSDMESTMRYLKPSRSQQVHEKVNEIFS
Ga0210388_109239892	3300021181	Soil	LWAGVDLRTVQQWLGHSDMESTMCYLKPSRSQQVREKVNEIFG
Ga0210397_104597724	3300021403	Soil	DLRTVQQWMGHTDMESTMRYLKPNRSQAVREKVNQTFAGQ
Ga0210386_112360521	3300021406	Soil	LRTVQQWLGHSDMESTMRYLKPSRSQHVREKVNEIFG
Ga0210384_110398321	3300021432	Soil	WRGLRTVQQWLGHSDMESTMRYLKPSRSQQVKEKVNEIFA
Ga0126371_101306755	3300021560	Tropical Forest Soil	LRTVQQWLGHSDMESTMRYLKPARNEAVREKVNEIFGGKNGK
Ga0213852_11711391	3300021858	Watersheds	LRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA
Ga0224549_10296031	3300022840	Soil	FDLRTVQQWLGHSDMESTMRYLQPSRSQHVKDKVNEIFG
Ga0208220_10816943	3300025627	Arctic Peat Soil	TVQNWLGHSDIESTMRYLKPSRSQQTRDKVNEIFGGVK
Ga0209584_102263752	3300025878	Arctic Peat Soil	TVQTWLGHSDMESTLRYLKAASARKPIVREKVNAAFASMAR
Ga0207693_110438921	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DLRTVQQWLGHSDMESTMRYLKPSRSQQVRAKVNEIFGGAQ
Ga0207660_111858331	3300025917	Corn Rhizosphere	TVQQWLGHSDMESTMRYLEPSRSKQVREKVNEIFP
Ga0207700_112316831	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	DLRTVQQRLGHSDMESTMRYLKPSRSEKVREKVNEIFA
Ga0207667_105989931	3300025949	Corn Rhizosphere	LRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFGGVQ
Ga0207677_121095391	3300026023	Miscanthus Rhizosphere	SGVDLRTVHLWLGHKDMESTMRYLKPARGKGVRDEVNATFEG
Ga0209890_101011351	3300026291	Soil	WHLQGGADLRTVQKWLGQTDMESTLRYLRSARGVAVHDKVNATFA
Ga0209267_12280141	3300026331	Soil	RTVQHWMGHKDIESTMRYLKPNRSQEVKAKVNHTFA
Ga0257161_10121912	3300026508	Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA
Ga0209039_100227591	3300027825	Bog Forest Soil	LRTVQLWMGHSDMESTMRYLKPNRSQAVREKVNAMFG
Ga0209274_105948911	3300027853	Soil	LRTVQSWMGHTDLQSTMRYLKPSRTQATRDKVNEIFAKVCK
Ga0209517_102832542	3300027854	Peatlands Soil	RTVQQWLGHSDMESTMRYLKPSRSQHVRDKVNEIFA
Ga0209006_104386963	3300027908	Forest Soil	TVQQWLGHSDMESTMRYLKPSRSQHVREKVNEIFA
Ga0257175_11174672	3300028673	Soil	TVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFA
Ga0302233_104279991	3300028746	Palsa	LRTVQQWLGHTDMESTMRYLKPSRSQAVRRKVNKIFA
Ga0247275_10139314	3300029817	Soil	MQAEVRFPWANVDLRTVQLWLGHKDLESTMRYLKPSRSRATRDKVNEIFA
Ga0311365_109965081	3300029989	Fen	LRTVQLWMGHSDMESTMRYLKPNRSQAVREKVNVMFG
Ga0311339_100355737	3300029999	Palsa	VQNTAFGHSEMESTMRYLKPSRSQHVRLKANEIFA
Ga0311337_106168502	3300030000	Fen	TVQLWMGHSDMESTMRYLKPNRSQAVREKVNAMFG
Ga0311338_109657901	3300030007	Palsa	TVQQWLGHSDRESTMRYLKPSRSQQVRDKVNEIFGR
Ga0311333_103931301	3300030114	Fen	DLRTVQLWMGHSDMESTMRYLKPNRSQAVREKVNAMFG
Ga0311372_103844732	3300030520	Palsa	AGVDLRTVQQWLGHSDRESTMRYLKPSRSQQVRDKVNEIFGR
Ga0311335_105700562	3300030838	Fen	RTVQLWMGHSDMESTMRYLKPNRSQAVREKVNVMFG
Ga0265740_10430101	3300030940	Soil	VQQWLGHSDMESTMRYLKPSRSQQVLEKVNEIFGGVQ
Ga0308190_11650141	3300030993	Soil	GVDLRTVQQWLGHSDMESTMRYLKPSHSQQVRKKVNEIFA
Ga0265760_102287042	3300031090	Soil	RTVQQWLGHSDMESTMRYLKPSRSQATKDKVNATFAAGGAQ
Ga0310686_1163928421	3300031708	Soil	TVQSWLGHSDMESTMRYLKPSRSQATRDKVNTAFAASAQG
Ga0307476_104460592	3300031715	Hardwood Forest Soil	RTVQQWLGHSDMESTMRYLKPSRSQKTHEKVNEIFA
Ga0307469_110177431	3300031720	Hardwood Forest Soil	VGSVDARTVQQWLDHSDMESTMRYLKPSRSQQVRDKVDEI
Ga0311351_105144802	3300031722	Fen	RTVQLWMGHSDMESTMRYLKPNRSQAVREKVNAMFG
Ga0307473_102451782	3300031820	Hardwood Forest Soil	TVQSWLGHKDLESTMRYLKPSRSQAVKDKVDATFA
Ga0307478_105425541	3300031823	Hardwood Forest Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSQHVLDKVNEIFA
Ga0306922_116427732	3300032001	Soil	VDLRTVQDWMGHTDIESTMRYLKPNRNKAVRQKVNETFRR
Ga0307471_1034806612	3300032180	Hardwood Forest Soil	LRTVQQWLGQSDMESTMRSLKPSRTQQAREKVHEVFA
Ga0306920_1029315342	3300032261	Soil	VDLRTVQQWLGHSDMESTMRYLKPSRSQQVREKVNEIFQ
Ga0335078_100114731	3300032805	Soil	RTVQQWLGHSDMESTMRYLKPSRSEKVREKVNEIFAL
Ga0335078_121408211	3300032805	Soil	DLRTVQQWLGHSDMESTMRYLKPSRSQAVAAKVNETFA
Ga0335080_120402591	3300032828	Soil	LRTVQQWLGHSDIESTMRYLKPARDKQTRAKVNEIFA
Ga0335081_100036411	3300032892	Soil	TVQQWLGHSDMESTMRYLKPSRSEKVREKVNEIFA
Ga0335071_100047271	3300032897	Soil	TVQQWLGHSDMESTMRYLKPSRSEKVREKVNEIFAL
Ga0335083_105370981	3300032954	Soil	QQWLGHSDMESTMRYLKPSRSPQVREKMNEISASLDAG
Ga0326728_108141472	3300033402	Peat Soil	QQWLGHSDMESTMRYLKPARNEAVREKVNEIFGGKNGS

Hidden Markov Model


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