Metagenome / Metatranscriptome Family F055161

Basic Information
Family ID	F055161
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	45 residues
Representative Sequence	MAIAPTLEKYLAAPTTKREADVVALKLFCLFSFILVGLIAAGIL
Number of Associated Samples	109
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.82 %
% of genes near scaffold ends (potentially truncated)	17.99 %
% of genes from short scaffolds (< 2000 bps)	88.49 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (62.590 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (15.827 % of family members)
Environment Ontology (ENVO)	Unclassified (35.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.568 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF03733	YccF	2.16
PF03734	YkuD	2.16
PF07311	Dodecin	2.16
PF05532	CsbD	1.44
PF11752	DUF3309	1.44
PF09458	H_lectin	1.44
PF09351	DUF1993	1.44
PF04366	Ysc84	1.44
PF00893	Multi_Drug_Res	0.72
PF00036	EF-hand_1	0.72
PF00261	Tropomyosin	0.72
PF01799	Fer2_2	0.72
PF10282	Lactonase	0.72
PF13683	rve_3	0.72
PF08241	Methyltransf_11	0.72
PF13340	DUF4096	0.72
PF13442	Cytochrome_CBB3	0.72
PF03625	DUF302	0.72
PF09650	PHA_gran_rgn	0.72
PF13551	HTH_29	0.72
PF03884	YacG	0.72
PF09361	Phasin_2	0.72
PF13333	rve_2	0.72
PF13360	PQQ_2	0.72
PF00117	GATase	0.72
PF14067	LssY_C	0.72
PF01402	RHH_1	0.72
PF00491	Arginase	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.16
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.16
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	2.16
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	2.16
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.44
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.44
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.72
COG1196	Chromosome segregation ATPase Smc	Cell cycle control, cell division, chromosome partitioning [D]	0.72
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	0.72
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.72
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
All Organisms	root	All Organisms	37.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
cellular organisms	root	All Organisms → cellular organisms	37.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.44 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.72 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.72 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Nitrobacter sp. 62-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. 62-13	0.72 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.59 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Rhizobium sp. 57MFTsu3.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	0.72 %
Nitrobacter sp. 62-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. 62-13	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1111793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. 62-13	572	Open in IMG/M
3300000567\|JGI12270J11330_10039283	Not Available	2665	Open in IMG/M
3300000567\|JGI12270J11330_10040814	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300000789\|JGI1027J11758_12844312	Not Available	713	Open in IMG/M
3300000890\|JGI11643J12802_11501573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	990	Open in IMG/M
3300004006\|Ga0055453_10045457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300004070\|Ga0055488_10063233	Not Available	832	Open in IMG/M
3300004803\|Ga0058862_10012838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300005164\|Ga0066815_10114657	Not Available	518	Open in IMG/M
3300005332\|Ga0066388_100777352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1553	Open in IMG/M
3300005345\|Ga0070692_10769997	Not Available	654	Open in IMG/M
3300005434\|Ga0070709_10026256	All Organisms → cellular organisms → Bacteria → Proteobacteria	3450	Open in IMG/M
3300005439\|Ga0070711_100395902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300005713\|Ga0066905_101242748	Not Available	668	Open in IMG/M
3300005713\|Ga0066905_101625938	Not Available	592	Open in IMG/M
3300006047\|Ga0075024_100442603	Not Available	670	Open in IMG/M
3300006047\|Ga0075024_100892443	Not Available	505	Open in IMG/M
3300006050\|Ga0075028_100246912	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300006050\|Ga0075028_101017188	Not Available	516	Open in IMG/M
3300006057\|Ga0075026_100302479	Not Available	873	Open in IMG/M
3300006057\|Ga0075026_100536390	Not Available	679	Open in IMG/M
3300006057\|Ga0075026_101029765	Not Available	514	Open in IMG/M
3300006059\|Ga0075017_100080809	Not Available	2236	Open in IMG/M
3300006059\|Ga0075017_101268681	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300006059\|Ga0075017_101486697	Not Available	533	Open in IMG/M
3300006102\|Ga0075015_100177673	Not Available	1122	Open in IMG/M
3300006162\|Ga0075030_101427335	Not Available	542	Open in IMG/M
3300006172\|Ga0075018_10462083	Not Available	656	Open in IMG/M
3300006172\|Ga0075018_10477602	Not Available	646	Open in IMG/M
3300006172\|Ga0075018_10769311	Not Available	526	Open in IMG/M
3300006354\|Ga0075021_10536206	Not Available	743	Open in IMG/M
3300006354\|Ga0075021_10745172	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300006804\|Ga0079221_10550998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	763	Open in IMG/M
3300006806\|Ga0079220_10030938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2370	Open in IMG/M
3300006854\|Ga0075425_100770135	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300006871\|Ga0075434_100683955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1044	Open in IMG/M
3300006904\|Ga0075424_102213340	Not Available	578	Open in IMG/M
3300009162\|Ga0075423_12164539	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300009525\|Ga0116220_10142149	Not Available	1028	Open in IMG/M
3300009810\|Ga0105088_1023429	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300009815\|Ga0105070_1075472	Not Available	645	Open in IMG/M
3300009820\|Ga0105085_1078403	Not Available	625	Open in IMG/M
3300009823\|Ga0105078_1018599	Not Available	792	Open in IMG/M
3300009837\|Ga0105058_1033946	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300010154\|Ga0127503_10240322	Not Available	695	Open in IMG/M
3300010359\|Ga0126376_12918422	Not Available	528	Open in IMG/M
3300010379\|Ga0136449_101383902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300010379\|Ga0136449_104223110	Not Available	532	Open in IMG/M
3300010396\|Ga0134126_10256553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2066	Open in IMG/M
3300010396\|Ga0134126_12723358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300011087\|Ga0138570_1022479	Not Available	507	Open in IMG/M
3300011999\|Ga0120148_1079720	Not Available	641	Open in IMG/M
3300012491\|Ga0157329_1028728	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300012915\|Ga0157302_10227595	Not Available	685	Open in IMG/M
3300012931\|Ga0153915_13286708	Not Available	525	Open in IMG/M
3300012951\|Ga0164300_10014868	All Organisms → cellular organisms → Bacteria	2561	Open in IMG/M
3300012958\|Ga0164299_10079185	Not Available	1642	Open in IMG/M
3300012960\|Ga0164301_10075854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1841	Open in IMG/M
3300012960\|Ga0164301_10919263	Not Available	680	Open in IMG/M
3300012961\|Ga0164302_11550544	Not Available	548	Open in IMG/M
3300012988\|Ga0164306_10742965	Not Available	784	Open in IMG/M
3300012989\|Ga0164305_11576799	Not Available	585	Open in IMG/M
3300013501\|Ga0120154_1061142	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300013766\|Ga0120181_1002413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7024	Open in IMG/M
3300015077\|Ga0173483_10430046	Not Available	686	Open in IMG/M
3300015371\|Ga0132258_11089826	Not Available	2019	Open in IMG/M
3300015371\|Ga0132258_11439367	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300015371\|Ga0132258_12236470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300015372\|Ga0132256_100108968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2712	Open in IMG/M
3300015372\|Ga0132256_103632724	Not Available	519	Open in IMG/M
3300015373\|Ga0132257_100595503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1365	Open in IMG/M
3300015374\|Ga0132255_105286613	Not Available	546	Open in IMG/M
3300017822\|Ga0187802_10006921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3519	Open in IMG/M
3300017822\|Ga0187802_10073028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1274	Open in IMG/M
3300017822\|Ga0187802_10332452	Not Available	595	Open in IMG/M
3300017822\|Ga0187802_10352179	Not Available	578	Open in IMG/M
3300017823\|Ga0187818_10107922	Not Available	1205	Open in IMG/M
3300017928\|Ga0187806_1076644	Not Available	1045	Open in IMG/M
3300017933\|Ga0187801_10180867	Not Available	830	Open in IMG/M
3300017936\|Ga0187821_10246410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	697	Open in IMG/M
3300017937\|Ga0187809_10330177	Not Available	568	Open in IMG/M
3300017943\|Ga0187819_10091985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1811	Open in IMG/M
3300017955\|Ga0187817_10530959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	751	Open in IMG/M
3300017955\|Ga0187817_10753493	Not Available	621	Open in IMG/M
3300017955\|Ga0187817_10788527	Not Available	607	Open in IMG/M
3300017973\|Ga0187780_10233291	Not Available	1287	Open in IMG/M
3300017973\|Ga0187780_10820594	Not Available	673	Open in IMG/M
3300017973\|Ga0187780_11199097	Not Available	556	Open in IMG/M
3300017974\|Ga0187777_10110261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	1814	Open in IMG/M
3300017994\|Ga0187822_10170997	Not Available	709	Open in IMG/M
3300017994\|Ga0187822_10218031	Not Available	643	Open in IMG/M
3300018006\|Ga0187804_10291823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	709	Open in IMG/M
3300018007\|Ga0187805_10050981	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300018007\|Ga0187805_10068942	Not Available	1590	Open in IMG/M
3300018029\|Ga0187787_10451602	Not Available	518	Open in IMG/M
3300019356\|Ga0173481_10502857	Not Available	618	Open in IMG/M
3300020580\|Ga0210403_10772092	Not Available	766	Open in IMG/M
3300021168\|Ga0210406_10906899	Not Available	663	Open in IMG/M
3300022533\|Ga0242662_10217486	Not Available	608	Open in IMG/M
3300025160\|Ga0209109_10164927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1108	Open in IMG/M
3300025167\|Ga0209642_10549947	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025325\|Ga0209341_10737256	Not Available	754	Open in IMG/M
3300025327\|Ga0209751_10410925	Not Available	1121	Open in IMG/M
3300026118\|Ga0207675_102137750	Not Available	576	Open in IMG/M
3300026535\|Ga0256867_10028153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2364	Open in IMG/M
3300026997\|Ga0207784_1032279	Not Available	536	Open in IMG/M
3300027049\|Ga0207806_1023839	Not Available	707	Open in IMG/M
3300027568\|Ga0208042_1044294	Not Available	1141	Open in IMG/M
3300027568\|Ga0208042_1132608	Not Available	626	Open in IMG/M
3300027570\|Ga0208043_1073750	Not Available	955	Open in IMG/M
3300027650\|Ga0256866_1004613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3402	Open in IMG/M
3300027674\|Ga0209118_1079541	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300027680\|Ga0207826_1046723	Not Available	1201	Open in IMG/M
3300027703\|Ga0207862_1044541	Not Available	1337	Open in IMG/M
3300027894\|Ga0209068_10545467	Not Available	672	Open in IMG/M
3300027894\|Ga0209068_10864809	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027910\|Ga0209583_10236925	Not Available	798	Open in IMG/M
3300027911\|Ga0209698_11261421	Not Available	542	Open in IMG/M
3300027915\|Ga0209069_10926261	Not Available	529	Open in IMG/M
3300027957\|Ga0209857_1010377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1898	Open in IMG/M
3300030620\|Ga0302046_11577528	Not Available	506	Open in IMG/M
3300031226\|Ga0307497_10198018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	868	Open in IMG/M
3300031231\|Ga0170824_122357169	Not Available	787	Open in IMG/M
3300031256\|Ga0315556_1096892	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031455\|Ga0307505_10342540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	705	Open in IMG/M
3300031474\|Ga0170818_109890228	Not Available	838	Open in IMG/M
3300031474\|Ga0170818_110537653	Not Available	706	Open in IMG/M
3300031562\|Ga0310886_10058150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1781	Open in IMG/M
3300031699\|Ga0315535_1107233	Not Available	1037	Open in IMG/M
3300031708\|Ga0310686_116832437	Not Available	1497	Open in IMG/M
3300031740\|Ga0307468_100190170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300031940\|Ga0310901_10217101	Not Available	770	Open in IMG/M
3300032174\|Ga0307470_10204081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1266	Open in IMG/M
3300032515\|Ga0348332_12512160	Not Available	622	Open in IMG/M
3300033513\|Ga0316628_104304857	Not Available	506	Open in IMG/M
3300034090\|Ga0326723_0221149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	841	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.93%
Host-Associated	Host-Associated	10.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.12%
Aquatic	Environmental → Aquatic	33.81%
Plants	Host-Associated → Plants	9.35%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.68%
Sediment	Environmental → Aquatic → Sediment	15.83%
Freshwater	Environmental → Aquatic → Freshwater	15.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.32%
Marine	Environmental → Aquatic → Marine	2.88%
Peat	Environmental → Terrestrial → Peat	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.39%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.32%
Sand	Environmental → Terrestrial → Soil → Sand	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.44%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.32%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.16%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.16%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.44%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	15.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.04%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.16%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.44%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.44%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011087	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031699	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_11117932	2228664022	Soil	EKYFWLSPVTKRDADVLAVKLFCLFSFVLVGLIVAGVL
JGI12270J11330_100392831	3300000567	Peatlands Soil	MAIAPTLEKYLAAPTTKREADVVALKLFCLFSFILVGLIAAGIL*
JGI12270J11330_100408144	3300000567	Peatlands Soil	MAIAPTLEKYLAARPTTKREIDVVAFKLFCLFSIILVGLIMAGIL*
JGI1027J11758_128443123	3300000789	Soil	MAIAPASEKYFWLSPVTKRXADVLAVKLFCLFSFVLVGLIVAGVL*
JGI11643J12802_115015733	3300000890	Soil	SQRGSTMAIAPTSGKSFWRRPATKHEADAMGVKLFCLFSFILVWLIVAGVL*
Ga0055453_100454573	3300004006	Natural And Restored Wetlands	MAIATTPRTHLWLRPATKREADAMAAKLFCLFSFILVALIMAGVL*
Ga0055488_100632331	3300004070	Natural And Restored Wetlands	MAIATTPRTHLWLRPATKREVDAMAAKLFCLFSFILVALIMAGVL*
Ga0062595_1001050132	3300004479	Soil	MAIAPTSGKSFWRRPATKHEADAMGVKLFCLFSFILVWLIVAGVL*
Ga0058862_100128381	3300004803	Host-Associated	MATASTSEKNVWFHPATKREADVLAVKLFCLFAFILVGLITGGVL*
Ga0066815_101146571	3300005164	Soil	MAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIM
Ga0066388_1007773522	3300005332	Tropical Forest Soil	NTARRKGGNNMAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL*
Ga0070692_107699972	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLVMAGVL*
Ga0070709_100262564	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MATARTSQNNVWFHPATKREADVLAVKLFCLFAFILVGLITAGVL*
Ga0070711_1003959021	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTLTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIL*
Ga0066905_1012427482	3300005713	Tropical Forest Soil	MVGVGWGTARNTSCRRGGNNMAIAPTLQRHLAARPRSKREADVVALKLFCLFSFILVGLIMAGVL*
Ga0066905_1016259382	3300005713	Tropical Forest Soil	MAIAPTSGKSYWRMPATKREADEMAVKLFCLFSFILIGLIITGVL*
Ga0075024_1004426032	3300006047	Watersheds	MAIAPTSEKYLLLRPKSKRESDVVAFKLFCLFSFILVGLITAGIL*
Ga0075024_1008924431	3300006047	Watersheds	MTIALEKYLAARPTTKREADVVAFKLFCLFSFILVGLIA
Ga0075028_1002469123	3300006050	Watersheds	MAIALEKYLAARPTTKREADVVAFKLFCLFSFILVGLIAAGIL*
Ga0075028_1010171881	3300006050	Watersheds	MAIAPTSEKYLLLRPKSKRESDVVAFKLFCLFSFILVGLI
Ga0075026_1003024791	3300006057	Watersheds	MTIATTLEKYLVGRPKTKREEDVIALKLFCLFSFILVGLIMSGIL*
Ga0075026_1005363902	3300006057	Watersheds	MAIAPTSEKYLLLRPKSKRESDVVAFKLFCLFSFILVGLIMAGIL*
Ga0075026_1010297651	3300006057	Watersheds	MAITLEKHLAARPTTKREADVLAFKLFCLFSFILVGLIAAGIL*
Ga0075017_1000808093	3300006059	Watersheds	MAIAPTLEKYFVLRPTTKREADVVAFKLFCLFSFILVGLIAAGIL*
Ga0075017_1012686811	3300006059	Watersheds	MTVATTLEKFLVGRPTTKREADVMALKLFCLFSFILVGLIMAGIL*
Ga0075017_1014866973	3300006059	Watersheds	APTLEKYFGLRPTKLEADVVAFKLFCLFSFILVGLITAGIL*
Ga0075015_1001776732	3300006102	Watersheds	MALAPTLEKYFGLRPTKLEADVVAFKLFCLFSFILVGLITAGIL*
Ga0075030_1014273352	3300006162	Watersheds	MAIAPTLEKHFVFRPTTKREADVVAVKLFCLFSFILVGLITAGIL*
Ga0075018_104620831	3300006172	Watersheds	MTVARTSERYFWLRPATKHEADALALKLFCLFSFILVGLITAGVL*
Ga0075018_104776021	3300006172	Watersheds	MTVATTLERYLVARPTTKREADVMALKLFCLFSFILVGLIMAGIL*
Ga0075018_107693111	3300006172	Watersheds	MAISPTLEKYLAAPATQRDADAMALKLFCLFSFILVGLIAAGIL*
Ga0075021_105362062	3300006354	Watersheds	MAIALEKYLAARPTTKREADVVAFKLFCLFSFILIGLIAAGIL*
Ga0075021_107451721	3300006354	Watersheds	MTVATTLEKYLVGRPTTKREADVMALKLFCLFSFILVGLIMAGIL*
Ga0079221_105509983	3300006804	Agricultural Soil	MATAPTSENNVWFHPATKREADVLAVKLFCLFAFILVGLITGGVL*
Ga0079220_100309383	3300006806	Agricultural Soil	MATLTPEKNVWFHPATKREADVLAVKLFCLFAFILVGLITGGVL*
Ga0075425_1007701351	3300006854	Populus Rhizosphere	MAIAPASEKYFWLSPVTKRDADVLAFKLFCLFSFVLV
Ga0075434_1006839552	3300006871	Populus Rhizosphere	MAIAPTSGKSFWRRPATKHEADAMGVKLFCLLSFILVWLIVAGVL*
Ga0075424_1022133402	3300006904	Populus Rhizosphere	MAIAPASEKYFWLSPVTKRDADVLAVKLFCLFSFVLVGLIVAGVL*
Ga0075423_121645392	3300009162	Populus Rhizosphere	MAIAPASEKDFWLSPVTKRDADVLAVKLFCLFSFVLVGLIVAGVL*
Ga0116220_101421492	3300009525	Peatlands Soil	MAIAPTLEKYLVARPTTKREIDVVAFKLFCLFSIILVGLIMAGIL*
Ga0105088_10234291	3300009810	Groundwater Sand	MAIARKLEKYFWFHPATKREADVVALKLFCLFSFILVGLITAGVL*
Ga0105070_10754721	3300009815	Groundwater Sand	MAIARTLEKYFWFHPATKREADVVALKLFCLFSFILVGMITAGVL*
Ga0105085_10784031	3300009820	Groundwater Sand	MAIARTLEKYFWFRPATKREADVVALKLFCLFSFILVGLITAGVL*
Ga0105078_10185991	3300009823	Groundwater Sand	MAIARTLEKYFWFRPATKREADVVALKLFCLFSFILVGMITAGVL*
Ga0105058_10339461	3300009837	Groundwater Sand	LRGLNKGGGNMAIARKLEEYFWFHPATKREADALALRLFCLFSFILVGLITAGVL*
Ga0127503_102403221	3300010154	Soil	MAISPTLEKYLAAPITQRDADAMALKLFCLFSFILVGLIAAGIL*
Ga0126376_129184221	3300010359	Tropical Forest Soil	MAIAPTLQRHLAARPRSNREADVVALKLFCLFSFILVGLIMAGVL*
Ga0136449_1013839021	3300010379	Peatlands Soil	EKYLAARPTTKREIDVVAFKLFCLFSIILVGLIMAGIL*
Ga0136449_1042231101	3300010379	Peatlands Soil	MAVAPTLEKYFGLRPTTKREADVVAFKLFCLFSFILVGLIT
Ga0134126_102565532	3300010396	Terrestrial Soil	MATAPTSENNVWFHPATKREADALAVKLFCLFAFILVGLITAGVL*
Ga0134126_127233582	3300010396	Terrestrial Soil	MATASTSEKNVWFHPTTKREADVLAVKLFCLFAFILVGLITGGVL*
Ga0138570_10224792	3300011087	Peatlands Soil	MAVAPTLEKYFLLRPTTKREADVVAFELFCLFSLILVGLITAGIL*
Ga0120148_10797201	3300011999	Permafrost	MAIAPTLEKNFWFRPATKREADVLALKLFCLFSFILVGLITAGGL*
Ga0157329_10287282	3300012491	Arabidopsis Rhizosphere	QRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL*
Ga0157302_102275951	3300012915	Soil	MAIPPASEKDFWLSPVTKRDADVLAVKLFCLFSFVLVGLIVAGVL*
Ga0153915_132867081	3300012931	Freshwater Wetlands	MAIAPTENVWFHPATKREADVLALKLFCLFAFILIGLITAGIL*
Ga0164300_100148684	3300012951	Soil	MTLTPTLEKYLSLSPATKHEADVMALKLFCLLSFILVGLITAGIL*
Ga0164298_101652523	3300012955	Soil	YRKGGQSMTLTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIL*
Ga0164299_100791852	3300012958	Soil	MTLTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIV*
Ga0164301_100758543	3300012960	Soil	MILTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIL*
Ga0164301_109192632	3300012960	Soil	MAISPTLEKYLAAPATQRDADAMALKLFCLFSFILVSLIAAGIL*
Ga0164302_115505441	3300012961	Soil	MAISPTLEKYLAVPTTQRDADAMALRLFCLFSFILVGLITAGIL*
Ga0164306_107429651	3300012988	Soil	MAMSPTLEKYLPAPTTQRDADAMALKLFCLFSFILVGLITAGIL*
Ga0164305_115767991	3300012989	Soil	MTHTPTLGKYLPLSPATKHEADVLKLFCLLSFVLVGLITAGIL*
Ga0120154_10611421	3300013501	Permafrost	MAIAPTLEKNFWFRPATKREADVLALKLFCLFSFILVGLITAGVL*
Ga0120181_100241315	3300013766	Permafrost	MAIAPTLEKNFWFRPATKREADVVALELFCLFSFILVGLITAGVL*
Ga0173483_104300461	3300015077	Soil	MAIAPASEKYFWLSPVTKRDADVLAFKLFCLFSFVLVGLIVAGVL*
Ga0132258_110898261	3300015371	Arabidopsis Rhizosphere	MATARTSQNNVWFHPATKREADVLAVKLFCLFAFILVG
Ga0132258_114393672	3300015371	Arabidopsis Rhizosphere	MATAPTSENNVWFHPATKREADALAVKLFCLFAFILVGLITAGIL*
Ga0132258_122364703	3300015371	Arabidopsis Rhizosphere	MAITDYFSLRPETKQEADVMALKLFCLFSFILVGLITVGVL*
Ga0132256_1001089683	3300015372	Arabidopsis Rhizosphere	MAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL*
Ga0132256_1036327241	3300015372	Arabidopsis Rhizosphere	MATASTSEKNVWFHPATKREADALAVKLFCLFAFILVGLITAGIL*
Ga0132257_1005955033	3300015373	Arabidopsis Rhizosphere	MAIAPTLQRHLTARPRCKREADVVALKLFCLFSFILVGLIMAGVL*
Ga0132255_1052866132	3300015374	Arabidopsis Rhizosphere	MATALTPEKNVWFHPATKREADVLAVKLFCLFAFILVGLITGGVL*
Ga0187802_100069215	3300017822	Freshwater Sediment	MAIAPTLEKYLAAPTTKREADVVAFKLFCLFSFILVGLIAAGIL
Ga0187802_100730282	3300017822	Freshwater Sediment	MAIAPTLEKYLAAEKYLAAPTTKREADVVAFKLFCLFSFILVGLITARIL
Ga0187802_103324521	3300017822	Freshwater Sediment	MAIAPTLEKYLVVPTTKREADLLALKLFCLFSFILVGLIAVGIR
Ga0187802_103521791	3300017822	Freshwater Sediment	MVIAPTLAKAILFRPTTKREADLVALKLFCLFSFILVGLIAAGIL
Ga0187818_101079221	3300017823	Freshwater Sediment	MTIAPTLEKYWAVPTTKREADLVALKLFCLFSFILVGLIAAGIL
Ga0187806_10766442	3300017928	Freshwater Sediment	MAIAPTLEKYLAAPTTKREADVAAFKLFCLFSLILVGLIAAGIL
Ga0187801_101808672	3300017933	Freshwater Sediment	MTIASTLEKYWAVQTTKREADLVALKLFCLFSFILVGLIAAGIL
Ga0187821_102464101	3300017936	Freshwater Sediment	MATLTPEKNVWFHPATKREADVLAVKLFCLFAFILVGLITGGVL
Ga0187809_103301772	3300017937	Freshwater Sediment	MAIAPTLEKYLAAPTTKREADVVAFKLFCLFSFILVGLITAGIL
Ga0187819_100919854	3300017943	Freshwater Sediment	MAIAPTLEKYLAVPTTKREADLLALKLFCLFSFILVGLIAVGIR
Ga0187819_104283111	3300017943	Freshwater Sediment	MALSPTWYFAVPTTKREADLLALKLFCLFSFILVGLITAGIL
Ga0187817_105309591	3300017955	Freshwater Sediment	MAIAPTLEKYLAAPTTKREADVVAFKLFFLFSFVLVGLIAAGIL
Ga0187817_107534931	3300017955	Freshwater Sediment	MAISPALEKYLAAPTTKREADLLACKLFCLFSFILVGLITAGIL
Ga0187817_107885271	3300017955	Freshwater Sediment	MALSPTWYFAVPTTKREADLLACKLFFLFSLILVGLITVGIL
Ga0187780_102332911	3300017973	Tropical Peatland	MAIASTLEKYVWFHPATKREADILALKLFCLFSFILLGLITAGV
Ga0187780_108205941	3300017973	Tropical Peatland	MAFAPTLARAVLFRPTTKREADLVALKLFGLFLFILVSLIAAGIL
Ga0187780_111990971	3300017973	Tropical Peatland	MALAPTLEKYLAAPTTKREADVVALKLFCLFSFILIGLITAGIL
Ga0187777_101102614	3300017974	Tropical Peatland	MAFAPTLARAVLFRPTTKREADLVALKLFGLFLCILVSLIAAGIL
Ga0187822_101709972	3300017994	Freshwater Sediment	MAIAPTLEKYLAAPTTKRAADVVEFKLFCLFSFILVGLIAAGIL
Ga0187822_102180311	3300017994	Freshwater Sediment	MATLTPEKNVWFHPATKREADVLAVKLFCLFAFILVGLITAGVL
Ga0187804_102918232	3300018006	Freshwater Sediment	MAIAPTLEKYLVVPTTKREPDLLALKLFCLFSFILVGLIAVGIL
Ga0187805_100509811	3300018007	Freshwater Sediment	MAIAPTLEKYLAVPTTKREADLLALKLFCLFSFILVGLIAVGMR
Ga0187805_100689422	3300018007	Freshwater Sediment	MAIAPTLEKYLAAPTTKREADVAAFKLFCLFSFILVGLIAAGIL
Ga0187787_104516021	3300018029	Tropical Peatland	MATAPTSERNVWFHPATKREADVLAFKLFCLFAFILVGLITAGVV
Ga0173481_105028572	3300019356	Soil	MAIAPASEKYFWLSPVTKRDADVLAFKLFCLFSFVLVGLIVAGVL
Ga0210403_107720922	3300020580	Soil	MTLTPTLENYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIL
Ga0210406_109068991	3300021168	Soil	MTLTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGVL
Ga0242662_102174862	3300022533	Soil	MAISPTLEKYLAAPTTQRDADAMALKLFCLFSFILVGLITAGIL
Ga0209109_101649273	3300025160	Soil	MAIARKLEKYFWFHPATKREADVVALKLFCLFSFILVGMITAGVL
Ga0209642_105499472	3300025167	Soil	GGGNMAIARKLEKYFWFHPATKREADVVALKLFCLFSFILVGMITAGVL
Ga0209341_107372561	3300025325	Soil	RTLEKYFWFRPATKREADALALRLFCLFSFILVGLITAGVL
Ga0209751_104109251	3300025327	Soil	MAIARTLEKYFWFRPATKREADALALRLFCLFSFILVGLITAGVL
Ga0207675_1021377502	3300026118	Switchgrass Rhizosphere	MAIAPTLQRHMAARARTKREADVVALKLFCLFSFILVG
Ga0256867_100281533	3300026535	Soil	MAIPRTLEKSFWFRPATKREADVLALKLFCLFSFILLGLITSGVL
Ga0207784_10322791	3300026997	Tropical Forest Soil	MAIAPTLEKYVPTTQREADLLAFKLFCLFSFILVGFIAAGIL
Ga0207806_10238391	3300027049	Tropical Forest Soil	MAIAPTLEKYVPTTQREADLLAHKLFCLFSFILVGLIAGGIF
Ga0208042_10442941	3300027568	Peatlands Soil	MAIAPTLEKYLVARPTTKREIDVVAFKLFCLFSIILVGLIMAGIL
Ga0208042_11326082	3300027568	Peatlands Soil	MAIAPTLEKYLAAPTTKREADVVALKLFCLFSFILVGLIAAGIL
Ga0208043_10737502	3300027570	Peatlands Soil	MAIAPTLEKYLAARPTTKREIDVVAFKLFCLFSIILVGLIMAGIL
Ga0256866_10046131	3300027650	Soil	MAIPRTLEKSFWFRPATKREADVLALKLFCLFSLILLGLITSGVL
Ga0209118_10795411	3300027674	Forest Soil	MAIAPTLEKNFRFRPATKREADVLALKLFCLFSFILVGLITAGVL
Ga0207826_10467232	3300027680	Tropical Forest Soil	MITATFERYLSLPTTKQEADLMALKLFCLFSLILVALITAGIL
Ga0207862_10445412	3300027703	Tropical Forest Soil	MITATFERYLSLPTTKHEADLMALKLFCLFSLVLVALITAGIL
Ga0209068_105454671	3300027894	Watersheds	MAIALEKYLAARPTTKREADVVAFKLFCLFLFILVGLIAAGIL
Ga0209068_108648092	3300027894	Watersheds	MAVALGKYLAASPTTKREADVVAFKLFCLFSFILVGLIMAGIL
Ga0209583_102369251	3300027910	Watersheds	MAIAPTSEKYLSLRPKSKREADVVAFKLFCLFSFILVGLIMAGIL
Ga0209698_112614211	3300027911	Watersheds	MAIAPTLEKHFVFRPTTKREADVVAVKLFCLFSFILVGLITAGIL
Ga0209069_109262611	3300027915	Watersheds	MNIALEKYLAGRPTTKREADVVAFKLFCLFSFILVGLIAAGIL
Ga0209857_10103773	3300027957	Groundwater Sand	MAIARKLEEYFWFHPATKREADVVALKLFCLFSFILVGMITAGVL
Ga0302046_115775281	3300030620	Soil	MAIARTLEKYFWFRPATKREADVVALKLFCLFSFILVG
Ga0307497_101980182	3300031226	Soil	KGGNNMAIAPALQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL
Ga0170824_1223571691	3300031231	Forest Soil	MAISPTLEKYLAAPTTRDADAMALRLFCLFSFILVGLITAGIP
Ga0315556_10968922	3300031256	Salt Marsh Sediment	MAIATTPRTHLWLRPATKREVDAMAAKLFCLFSFILVALIMAGVL
Ga0307505_103425401	3300031455	Soil	WGTARNTSRRKGGNNMAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL
Ga0170818_1098902282	3300031474	Forest Soil	MAISPTLEKYLAAPTTRDADAMALRLFCLFSFILVGLITAGIL
Ga0170818_1105376532	3300031474	Forest Soil	MTLTPTLEKYLPLSPATKHEADVMALKLFCLLSFILVGLITAGIL
Ga0310886_100581501	3300031562	Soil	APTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL
Ga0315535_11072332	3300031699	Salt Marsh Sediment	MAIATTPRTHLWLRPATKREVDAMAAKLFCLFSFILVALILAGVL
Ga0310686_1168324375	3300031708	Soil	MAIATALEKHFVLRPTTKREADVVAFKLFCLFSLILVGLITVGIL
Ga0307468_1001901703	3300031740	Hardwood Forest Soil	MAIAPTLQRHMAARARTKREADVVALKLFCLFSFILVGLIMAGVL
Ga0310901_102171011	3300031940	Soil	MAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL
Ga0307470_102040814	3300032174	Hardwood Forest Soil	MAIAPTLQRHLAARPRTKREADVVALKLFCLFSFILI
Ga0348332_125121602	3300032515	Plant Litter	MAIATTLEKHFVLRPTTKREADVVAFKLFCLFSFILVGLITAGIL
Ga0316628_1043048571	3300033513	Soil	MAIAPTLQRHLTARPRSKREADVVALKLFCLFSFIL
Ga0326723_0221149_67_264	3300034090	Peat Soil	MVGVSWWTARNTSRRKGGNNMAIAPTLQRHLTARPRSKREADVVALKLFCLFSFILVGLIMAGVL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055161

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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