NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055160

Metagenome / Metatranscriptome Family F055160

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055160
Family Type Metagenome / Metatranscriptome
Number of Sequences 139
Average Sequence Length 86 residues
Representative Sequence MTITLELPPEAEANLVAQAKARGLSLDAFLRTIITTQAAAMESVKSVQTLPREGEELDRAIDELFDTVQVPPGVGEGAMRRENWYR
Number of Associated Samples 117
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.04 %
% of genes near scaffold ends (potentially truncated) 31.65 %
% of genes from short scaffolds (< 2000 bps) 74.10 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.086 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.230 % of family members)
Environment Ontology (ENVO) Unclassified
(24.460 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.043 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150
1P1_C_00773140
2deeps_00778370
3JGI12270J11330_1000180512
4A10PFW1_101879191
5JGI12635J15846_100296031
6C687J26631_102861451
7JGI25617J43924_101381112
8Ga0062385_108665601
9Ga0062384_1006869572
10Ga0062387_1002519112
11Ga0062389_1006103841
12Ga0062389_1007002962
13Ga0062389_1025182972
14Ga0062389_1046103532
15Ga0058891_15616902
16Ga0062386_1006025782
17Ga0058899_110649642
18Ga0062388_1016404561
19Ga0066672_106807241
20Ga0070766_103935182
21Ga0075028_1000110392
22Ga0075028_1001628292
23Ga0075018_104688911
24Ga0070765_1004143861
25Ga0075021_110539311
26Ga0075522_100129962
27Ga0066659_112502422
28Ga0073928_103749073
29Ga0066710_1022151781
30Ga0066793_105899711
31Ga0099830_117277322
32Ga0066709_1034441821
33Ga0116220_104354392
34Ga0116136_10690772
35Ga0116111_100081519
36Ga0116105_10744762
37Ga0116129_100002211
38Ga0116135_13468321
39Ga0116215_11528571
40Ga0116224_105555001
41Ga0074046_100670852
42Ga0136449_1009598593
43Ga0150983_108337512
44Ga0137392_105743293
45Ga0137393_100520352
46Ga0137393_116685861
47Ga0137389_108637771
48Ga0137363_102503352
49Ga0137362_104460812
50Ga0137362_108440722
51Ga0137362_116558671
52Ga0137379_110981502
53Ga0137378_100620365
54Ga0150985_1149491192
55Ga0137375_107597651
56Ga0150984_1047127611
57Ga0150984_1229315042
58Ga0137398_110047922
59Ga0137395_104214142
60Ga0137395_104284802
61Ga0168317_10763522
62Ga0181518_104525211
63Ga0181534_107605842
64Ga0181537_105980122
65Ga0182014_100047559
66Ga0182013_100189264
67Ga0182024_1000138758
68Ga0182024_102359222
69Ga0182024_105076261
70Ga0181525_103495592
71Ga0181516_105688972
72Ga0181522_101725992
73Ga0167633_10002443
74Ga0167658_10027018
75Ga0163144_101107132
76Ga0136617_104626341
77Ga0187856_13137042
78Ga0187848_103598041
79Ga0187810_105367092
80Ga0187862_104575522
81Ga0187887_105122621
82Ga0187851_106645931
83Ga0187859_105132301
84Ga0184636_13520472
85Ga0163150_100037368
86Ga0210406_106927182
87Ga0210391_102768762
88Ga0210402_101250404
89Ga0212123_107734491
90Ga0224545_10078201
91Ga0224547_10176122
92Ga0179591_10400002
93Ga0208038_10311492
94Ga0208193_100012929
95Ga0209483_10086033
96Ga0207700_110480201
97Ga0257158_10115663
98Ga0209648_100036494
99Ga0209648_100588865
100Ga0209577_104849621
101Ga0179587_100431852
102Ga0209116_10794873
103Ga0208044_10281833
104Ga0208565_11122121
105Ga0308309_114515431
106Ga0311362_107213302
107Ga0311340_107847832
108Ga0311352_105897271
109Ga0311338_119925021
110Ga0311372_113905702
111Ga0311355_118398801
112Ga0073994_116076832
113Ga0170834_1026023302
114Ga0170822_110987131
115Ga0170823_132980851
116Ga0299914_108240012
117Ga0170824_1084614932
118Ga0302325_100510842
119Ga0302325_100543346
120Ga0302325_103332341
121Ga0302325_107101203
122Ga0302324_1018888992
123Ga0302324_1028056802
124Ga0170818_1012385742
125Ga0302326_1000702619
126Ga0302326_102812084
127Ga0310686_1032574591
128Ga0310686_10440203919
129Ga0310686_1052476472
130Ga0310686_1064184401
131Ga0310686_1196297782
132Ga0307479_116184621
133Ga0311301_100476577
134Ga0348332_121210323
135Ga0348332_121691492
136Ga0335081_102215395
137Ga0334790_004250_259_519
138Ga0370515_0355245_360_617
139Ga0370492_0119689_761_1021
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.12%    β-sheet: 0.00%    Coil/Unstructured: 50.88%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MTITLELPPEAEANLVAQAKARGLSLDAFLRTIITTQAAAMESVKSVQTLPREGEELDRAIDELFDTVQVPPGVGEGAMRRENWYRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
92.1%7.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Microbial Mat
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Polar Desert Sand
Iron-Sulfur Acid Spring
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Glacier Forefield Soil
Peatlands Soil
Arctic Peat Soil
Permafrost
Soil
Soil
Grasslands Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Soil
Untreated Peat Soil
Bog Forest Soil
Bog
Prmafrost Soil
Permafrost
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Palsa
Bog
Plant Litter
Weathered Mine Tailings
Avena Fatua Rhizosphere
Avena Fatua Rhizosphere
4.3%6.5%4.3%5.0%2.9%3.6%12.2%5.8%3.6%3.6%3.6%3.6%9.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_C_007731402140918006SoilMTITLELPPETEASLLAQAEARGLTLDAYLQTVIANQAATESVSPLQSLPTAGDDLDRAIDELFDTVQVPPGV
deeps_007783702199352024SoilMTITLELPPETEASLLAQARTRGLSLDDFVKTIIANQAAIAASMKPLETLPLRGEELDGAIDELFDTVQVPPGVGQGAMQRKNWYR
JGI12270J11330_10001805123300000567Peatlands SoilMTITLELQPETEASLLAQAQARGLSLDAYLRSIIISQAASAETARALPAFPRDGEDLDRAIDELFDTVEVPPGVGQGAMRRENWYR*
A10PFW1_1018791913300001538PermafrostMTITLILPPETEQTLLAQAKAKGVALDVFLQTIIANQAAAAESMKPQTIPRDGEDWDRSIDELFDTVQVPPGVGEGAMRRENWYR*
JGI12635J15846_1002960313300001593Forest SoilGGGRGTMLEEATMTIVLELPPDAEASLIAQAKARGLSLDAFLRTIIASQAGAEAPVKSMRGLSCEGEDLDRAIDELFDAVPVPPGVGEGVMRRENWYR*
C687J26631_1028614513300002124SoilMTITLELPPETEANLVEQAKARGVSLDVFLQTIIATQAAAVQAPNAIRTLPLEGEDLDRAIDEVFDTVPVPPGVGQGAMRRENWYR*
JGI25617J43924_1013811123300002914Grasslands SoilMTIKLEIPPEAEANLAAQAKARGLSLDAFLRTIIATQAAAMDSARSVQAIPREGEELDRAIDELFDIVQVPPGVGEGAMRRDN
Ga0062385_1086656013300004080Bog Forest SoilMTITLNLPPETEQTLLAQAKARGVSLDVFLQTIISSQVAAAEATKPLQHLLRQGEDLDRAIDELFDTVPVPAGVGKGAMHRENWYR*
Ga0062384_10068695723300004082Bog Forest SoilLVKGATMTITLNLPPETEQTLLAQAKARGVSLDVFLQTIISSQVAAAEATKPLQHLLRQGEDLDRAIDELFDTVPVPAGVGKGAMHRENWYR*
Ga0062387_10025191123300004091Bog Forest SoilMLKEAPMTITVELPPEAEANLVAQAKARGLSLDAFLRTIITTQASAMESVKAIQALPRDGEELDRAIDELFDAVQVPPGIGEGAMHRENWYR*
Ga0062389_10061038413300004092Bog Forest SoilPAISGWSEPIPRCQSRPKGDTLVKGATMTITLNLPPETEQTLLAQAKARGVSLDVFLQTIISSQVAAAEATKPLQHLLRQGEDLDRAIDELFDTVPVPAGVGKGAMHRENWYR*
Ga0062389_10070029623300004092Bog Forest SoilMTITLEHKLGGTMLKEAPMTITLELPPEAEANLVVQAKARGLSLDAFLRTIITTQAAAMEAVKPVQSLTQEEEELDRAIDELFRRSSDSVRALRREIWYR*
Ga0062389_10251829723300004092Bog Forest SoilLPPETEETLLAQAKARGVTLDVFLQTIIANQVATADTMEPSRDFPAEGEELDLSIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0062389_10461035323300004092Bog Forest SoilLSGTMLKEAPMTITVELPPEAEANLVAQAKARGLSLDAFLRTIITTQASAMESVKAIQALPRDGEELDRAIDELFDAVQVPPGIGEGAMHRENWYR*
Ga0058891_156169023300004104Forest SoilITLKLPPETEASLLAQAKARGVSLDDFLKSLIVNQAGSAETAEKLFQNLQGEELDRAIDELFDVVQVPPRVGQGAMRRENWYR*
Ga0062386_10060257823300004152Bog Forest SoilMTITLNIPPETEETLLAQAKARGVTLDVFLQTIIANQVAAAHTMEPSRNFPADGEELDRSIDDLFDTVQVPPGVGEGAMRRENWYR*
Ga0058899_1106496423300004631Forest SoilMTLTLELTPETEAKLAAQAEARGLSLDAFLRTIITTQAATMESVKPVQALPREEEDLDRAIDELFDTVKVPPGVGEGAMRRENWYR*
Ga0062388_10164045613300004635Bog Forest SoilITVELPPEAEANLVAQAKARGLSLDAFLRTIITTQASAMESVKAIQALPRDGEELDRAIDELFDAVQVPPGIGEGAMHRENWYR*
Ga0066672_1068072413300005167SoilMTITLELPPETEASLLAQAEARGLPLDAFLKILIVNQAGSVDTAGKLFQTLQGEELDRAIDELFDTVQVPPGVGRGAMHRENWYR*
Ga0070766_1039351823300005921SoilMTIILELPPDGEASLIAQAKARGLSLEAFLQTIITAQAGAGDPAKSMRNLAGEGEDVGRVIDELFDTVQVPPGVGEGAMCHENWYR*
Ga0075028_10001103923300006050WatershedsMTITLELPPDAEASLAAQAKARGLPLDAFLRTILATQAAAMESVQSVPALPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0075028_10016282923300006050WatershedsMTITLELSPEAEANLVAQATARGLSLDAFLRTIITTQAAAMEPARSVQPLAHEGDPDRAIDELFDTVEVPPGVGEGAMRRENWY*
Ga0075018_1046889113300006172WatershedsMTITLELPPDAEASLAAQAKARGLPLDAFLRTILATQAAAMESVQSVPALPREGEDLDRAIDELFDTVQVPPGVG
Ga0070765_10041438613300006176SoilMTITLELPPETEASLLAQAKARGLALDAFLKALIVNQAGTADAPGNLFQILQGEELDRAIDELFDTVQVPPGVGQGAMQRENWYR*
Ga0075021_1105393113300006354WatershedsMTITLELPSDIAASLASQAEARGLSLDAFLQSMVTAHAVEPVKSANGFPPGGEGSDGAIDELFDTVQVPPGVGQGAMRRENWYR*
Ga0075522_1001299623300006638Arctic Peat SoilMTILLELPPDAEASLMAQATACGLSLDAFLQTIITTQASAGAHAKSMRSLACEEDLDRAIDELFDTVPVPPGVGEGVMRRENWYR*
Ga0066659_1125024223300006797SoilMTITIELPPEIEASLLAQAKARGITLDAFVETIIANQAAAVEAPKPLETVSREADDVDRAIDEIFDTVQVPPG*
Ga0073928_1037490733300006893Iron-Sulfur Acid SpringMTITLELLLETEASLLAQARARGLSLDAFVKAIIANQAATAASVKPPETLSLRGEELERAIDELFDTVQVPPGVGHGAMQRENWYR*
Ga0066710_10221517813300009012Grasslands SoilMTITLELPPEAEANLVAQAKARGLSLDAFLRTIITTQAAAMESVKSVQTLPREGEELDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0066793_1058997113300009029Prmafrost SoilMLNEATMTITLELPPEAEENLVGQARARGLSLDAFLRAIITTQAAAFQPVKAVQALPREGEDLDRMIDELFDTV
Ga0099830_1172773223300009088Vadose Zone SoilMLKEATMTITLELTSEAEANLVAQAKARGLSLDAFLRTIITSQAAAMESVKSVQALPRDGEELDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0066709_10344418213300009137Grasslands SoilMLKEARMTITLELPPEAEANLVAQAKARGLSLDAFLRTIITTQAAAMESVKSVQTLPREGEELDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0116220_1043543923300009525Peatlands SoilMTITLELQPETEASLLAQAQARGLSLDAYLRSIIISQAASAETARALPAFPRDGEDLDRAIDELFDTVEVPPGVG
Ga0116136_106907723300009547PeatlandMTITLELPPEAGANLVAQAKARGLSLDAFLRTIIATQAAAVEPVKSVQAIPREGEDLDRAIDELFDTVQVPPGVGEGA
Ga0116111_1000815193300009616PeatlandMTITLELPPEAGANLVAQAKARGLSLDAFLRTIIATQAAAVEPVKSVQAIPREGEDLDRAIDELFDTVQVPPGVGEGATRRENWYR*
Ga0116105_107447623300009624PeatlandMTITLELPPEAEANLVAKAKARGLSLDAFLRTIITTQAAAMEAVKPVQSLTQEEEELDRAIDELLRRSSDSVRALRREIWYR*
Ga0116129_1000022113300009633PeatlandMLNEATMTITLELPPEAEASLVAQAEARGLSLDAFLRAIIKTQAAAEESANSAQALRRGGEDPDRAIDDIFDTVQVPPGVGEGAMRRENWYK*
Ga0116135_134683213300009665PeatlandLAAQVEARGLSLNAFLGAISATHAAALPVEPRQAPSEEEELDRVIDDLFDVVSVPPGVGEGAMRRENWYP*
Ga0116215_115285713300009672Peatlands SoilMTITLELQPETEASLLAQAQARGLSLDAYLRSIIISQAASAETARALPAFPRDGEDLDRAIDELFDTVEVPPGVGQGAMRREN
Ga0116224_1055550013300009683Peatlands SoilMTITLEIPAETEAKLLAQAKSRGLTLDAFVKTIIADQAAAAEAARPPGNLLPQGEESDRAIDELFDTVQVPPGVGDGAMRRENWYR*
Ga0074046_1006708523300010339Bog Forest SoilVTITLELPPETEANLVAQAKARGLSLDAFLRTIITTQAVVVESVKVVGDSPREQHDLDRAIDELFDTVQLPPGIGEGAMRRENWYR*
Ga0136449_10095985933300010379Peatlands SoilMTITLELPPDAEAGLAAQAQARGLSLDDLLRTIITSAAMESLKSAPTLPSQGEELDRAIDQLFDTVPIPLGVGQGAMRRENWYR*
Ga0150983_1083375123300011120Forest SoilTITLKLPPETEASLLAQAKARGVSLDDFLKSLIVNQAGSAETAEKLFQNLQGEELDRAIDELFDVVQVPPRVGQGAMRRENWYR*
Ga0137392_1057432933300011269Vadose Zone SoilAQAKARGLSLDAFLRTIITTQAAAMESVKSVQSFPREREDLDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0137393_1005203523300011271Vadose Zone SoilMLKEAPMTITLELPPEAEAKLVAQANARGLSLDAYLRTIITTQAAGMEPVESGQPLPREGEDLDRAIDELFDTVQVPPGVGEGAMRRANLCR*
Ga0137393_1166858613300011271Vadose Zone SoilVASPAYGHLSKIFEDVFPPEAEANLVAQARSRGLSLDAFVQTIITTQAATMESVKLFQALPREGDDIDRAIDELFDTVEVPLGVGEGAM
Ga0137389_1086377713300012096Vadose Zone SoilMLKEAMMTITLELPPEAEAKLVAQAKARGLSLDAFLRTIITTQAAAMESVKSVQPLPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0137363_1025033523300012202Vadose Zone SoilMLKEAPMTITLELPPEAEAKLVAQANACGLSLDAYLRTIITTQAAGMEPVESSQPLPREGEDLDRAIEELFDTVQVPPGVGEGAMRRENWYR*
Ga0137362_1044608123300012205Vadose Zone SoilMLKEAPMTITLELPPEAEAKLVAQANARGLSLDAYLRTIITTQAAGMEPVESSQPLPREGEDLDRAIEELFDTVQVPPGVGEGAMRRENWYS*
Ga0137362_1084407223300012205Vadose Zone SoilMTITLNLPPETEQSLLAQAQARGVSLNVFLETIIANQVAASEAMKPLQKLSRQGDELDRSIDELFDTVQVPPGIGEGAMRRENWYR*
Ga0137362_1165586713300012205Vadose Zone SoilTLELPPANGGESFRSAKARGLPLDAFLRTVIANQAASADTAGKLFQALQGEELDRAIDELFDTVQVPPGVGQGAMNRENWYR*
Ga0137379_1109815023300012209Vadose Zone SoilMLKEAPMTITLELPPEAEANLVAQAKARGLSLDAFLRTILTTQAAAPESVKSVQPLPREGEELDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0137378_1006203653300012210Vadose Zone SoilMLKEAPMTITLELPPEAEANLVAQAKARGLSLDAFLRIIITMQAAAMGSIKSAQALPREGEELDRAIDELFDTVQVPPGVGEGAMCRENWYR*
Ga0150985_11494911923300012212Avena Fatua RhizosphereMTITLELPPETESSLLAQAEARGLTLNAFLQTIIAEQAIAAESIQSAARRTHDAEASDRIIDELFDTISVPPGVGEGAMRRENWYRGSLSIPMF*
Ga0137375_1075976513300012360Vadose Zone SoilMMITLDLPPETEASLLAQAKERGLTLDDFVKTILANQATAAEALKPPVRFPGAGEELDRAIDELFDTVPLPPGVGEGAMRRQNWYR*
Ga0150984_10471276113300012469Avena Fatua RhizosphereMTITLELPPETEKSLIAQAEALGLTLDAFVRTIITNQAAATEAVKPLSNLPREGQELDEAIDEVFDTVRVPPGVGQGAMRRENWYR*
Ga0150984_12293150423300012469Avena Fatua RhizosphereMTITLELPPETESSLLAQAEARGLTLNAFLQTIIAEQAIAAESIQSAARRTHDAEASDRIIDELFDTIAVPPGVGEGAMRRENWYR*
Ga0137398_1100479223300012683Vadose Zone SoilMLKEAPMTITLELPPEAEAKLVAQANARGLSLDAYLRTIITTQAAGMEPVESSQPLPREGEDLDRAIEELFDTVQVPPGVGE
Ga0137395_1042141423300012917Vadose Zone SoilSPETKAKLVAQASARGLSLEAYLQTILTTQAAAMEPVKSVQPLPCEVEDSDRAIEELFDTVEVLPGVGERAMRRENWYR*
Ga0137395_1042848023300012917Vadose Zone SoilMLKEAPMTITLELPPEAEAKLVAQANARGLSLDAYLRTIITTQAAGMEPVESSQPLPREGEDLDRAIEELFDTVQVPPGVGEGAMRRENWYR*
Ga0168317_107635223300012982Weathered Mine TailingsMLEEPTMTIVLELPPDAEASLIAQAKACGLSLDAFLQIIITTQASAGAQAQSMRGLACEEDLDRAIDELFDTVQVPPGVGEGVMRRENWYR*
Ga0181518_1045252113300014156BogIFRRRLSRSFFAQANAGGLPLDAFLQTIIANQATAADATKPLQSRSGDLEESDRAIDELFDIVPVPPGVGQGAMRHENWYR*
Ga0181534_1076058423300014168BogMSITLELPPDAEANLAAQARSRGLSLDAFLRTIITAHAAAMEPATSVQAIPRQGEGLDRAIDQLFDAVPVPPGVGQGAMRRENWYR*
Ga0181537_1059801223300014201BogMNEVAMTITLELAPEAEASLVAQANARGLSQDAFLHTIIAAQAVAMESARSVQSLHSGGQDPDRLIDELFDIVQM
Ga0182014_1000475593300014491BogMTITLELPPDAEANLAAQARSRGLSLDAFLRTIIAAHAAAMEPVKPAQTIPRGGDELDRAIDRLFDAVPVPPGVGQGAMRRENWYR*
Ga0182013_1001892643300014492BogMTITLELPPDAEANLAAQARSRGLSLDAFLQTIIAAHAAAMEPVTSVQAISREGDELDREIDQLFDAVPVPPGIGRGAMRRENWYR*
Ga0182024_10001387583300014501PermafrostMTITLNLPPETEQTLLAQAKARGISLDVFLQTIITNQAAAAEAMKPIQDLPREGEELDRSIDELFDTVPVPPGVGQGAMRRENWYR*
Ga0182024_1023592223300014501PermafrostMLEGATMTIVLELPPDAEESLIAQAKARGLSLDAFLRTIITTQAGAEAPVKSMRDLSCEGEDLDRAVDELFDTVQVPPGVGEGVMRRENW*
Ga0182024_1050762613300014501PermafrostMLKEALMTITLELPPEAEAKLVAQAKARGLSLDAFLRTIITTQAAAMESVKPVQSLSREGEDRDRAIDELFDTVQVPPGVGEGAMRRENWY
Ga0181525_1034955923300014654BogVVAGDWWLVAGGAEEVRCLKEAMMTITLELPPEAEANLMAQAKARGVSLDAFLRGIIAAQAAAIESAKSAQALPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR*
Ga0181516_1056889723300014655BogMTITLELPPDAEANLAAQARSRGLSLDAFLQTIIAAHAAAMEPVTSVQAISREGDELDREIDQLFDAVPVPPGIG
Ga0181522_1017259923300014657BogMLKEATMTITLELPPEAEANLAAQAKARGLSLDAFLRGIIATQAAAMESVKSAHALPSEAEDLDRAIDELFDTVQVPPGVGDGAMRRENWYR*
Ga0167633_100024433300015069Glacier Forefield SoilMLKEATMTITLELPPETEATLVAQANARGLSLDVFLRTIIATQAAAMESVRSVQALSTEGEDLDGAIDELFDTVQIPPGVGQGAMRRENWYR*
Ga0167658_100270183300015195Glacier Forefield SoilMTITLNLQPEAEQSLLAQATARGLSLYAFLQTIITNQAAAAEATKPLGNLPSEGEELDRLIDELFDTVQVPPGVGKGVMHREN*
Ga0163144_1011071323300015360Freshwater Microbial MatMTITLELAPETEKSLIAQAEARGLTLDAFVKTIITNQAAAAEAVQPLSSLPRHGEELDRAIDEVFDTVRVPPGVGQGAMRRENWYR*
Ga0136617_1046263413300017789Polar Desert SandEKSLIVQAEARGLTLDAFVKTIITNQAAAAQAVKPLSTLPRDGQELERAIDEVFDTVQVPPGVGQGAMRRENWYR
Ga0187856_131370423300017925PeatlandMTITLELPPEAGANLVAQAKARGLSLDAFLRTIIATQAAAVEPVKSVQAIPREGEDLDRAIDELFDTVQVPPGVGEGATRRENWYR
Ga0187848_1035980413300017935PeatlandMTITLELPPDAEANLAAQARSRGLSLDAFLRTIIAAHAAAMEPVKPAQTIPRGGDELDRAIDRLFDAVPVPPGVGQGAMRRENWYR
Ga0187810_1053670923300018012Freshwater SedimentYDIARGTVTITLDLPPETEANLVAQAKARGLSLDAFLKTIITTQAAVVESVKVVAPREQRDLDRAIDELFDAVQLPPGIGEGAMRRENWYR
Ga0187862_1045755223300018040PeatlandMTITLELPPEAGANLVAQAKARGLSLDAFLRTIIATQAAAVEPVKSVQAIPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0187887_1051226213300018043PeatlandMLKEAPMTITLELPPEAEANLVAQAKARGLSLDAFLRTIITTQAAAMEAVKPVQSLTQEEEELDRAIDELLRRSSDSVRALRREIWYR
Ga0187851_1066459313300018046PeatlandMTITLELPPDAEANLAAQARSRGLSLDAFLRTIIAAHAAAMEPVKPAQTIPRGGDELDRAIDRLFDAVPV
Ga0187859_1051323013300018047PeatlandMLKEAPMTITLELPPEAEANLVAKAKARGLSLDAFLRTIITTQAAAMEAVKPVQSLTQEEEELDRAIDELLRRSSDSVRALRREIWYR
Ga0184636_135204723300018068Groundwater SedimentMTLTLELSPETEAGLLAQAKARGLSLDAFVKAIIVSQAAAAASEKPLESLPLQGEDLDRAIEELFDTVQVPPGVGQG
Ga0163150_1000373683300020195Freshwater Microbial MatMTITLELAPETEKSLIAQAEARGLTLDAFVKTIITNQAAAAEAVQPLSSLPRHGEELDRAIDEVFDTVRVPPGVGQGAMRRENWYR
Ga0210406_1069271823300021168SoilLPPEAEANLIAQAKARGLSLDAFLRTIIATQAAAMESPKSIQPFPREGDDLDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0210391_1027687623300021433SoilMTIILELPPDGEASLIAQAKARGLSLEAFLQTIITAQAGAGDPAKSMRNLAGEGEDVGRVIDELFDTVQVPPGVGEGAMCHENWYR
Ga0210402_1012504043300021478SoilMTITLELPPETEASLLAQAKSRGLPLDAFLKALLVNHARSGDAAGKLFQNLQGEELDRAIDELFDAVQVPPGVGQGAMHRENWYR
Ga0212123_1077344913300022557Iron-Sulfur Acid SpringMTITLELLLETEASLLAQARARGLSLDAFVKAIIANQAATAASVKPPETLSLRGEELERAIDELFDTVQVPPGVGHGAMQRENWYR
Ga0224545_100782013300022881SoilYFPTHLLSGTMLKEAPMTITLELPPEAEANLVAQAKARGLSLDAFLRTLITTQAAALESARSVQPLPREGEERDRAIDELFDTVQIPPGIGEGAMRRENWYR
Ga0224547_101761223300023255SoilMLKEAPMTITLELPPEAEANLVAQAKARGLSLDAFLRTLITTQAAALESARSVQPLPREGEERDRAIDELFDTVQIPPGIGEGAMRRENWYR
Ga0179591_104000023300024347Vadose Zone SoilMTITLELPPEAEISMLAQAEAHGLTLAAYLQTIIANQVAATESVKVLQRPAAEEDSDQTIDELFDIVQVPPGVGEGAMRRENWYR
Ga0208038_103114923300025446PeatlandLNEATMTITLELPPEAGANLVAQAKARGLSLDAFLRTIIATQAAAVEPVKSVQAIPREGEDLDRAIDELFDTVQVPPGVGEGATRRENWYR
Ga0208193_1000129293300025463PeatlandMTITLELPPEAEASLVAQAEARGLSLDAFLRAIIKTQAAAEESANSAQALRRGGEDPDRAIDDIFDTVQVPPGVGEGAMRRENWYK
Ga0209483_100860333300025862Arctic Peat SoilMTILLELPPDAEASLMAQATACGLSLDAFLQTIITTQASAGAHAKSMRSLACEEDLDRAIDELFDTVPVPPGVGEGVMRRENWYR
Ga0207700_1104802013300025928Corn, Switchgrass And Miscanthus RhizosphereMTITLELSPEDAAKLVAQAKARGLSLDAFLRTIITAQAAAMESVKSAQPLPREGEDLDRAIDELFDIVQLPPGVGERATRRENWYR
Ga0257158_101156633300026515SoilMKITLELPPEAEATLAAQAKAPGLSLDAFVRAIITTQAAAMEPVKSVQALPREAEDLDRAIDELFDTVQIPPGVGQGAMRRENWYR
Ga0209648_1000364943300026551Grasslands SoilMLTEATMTIKLEIPPEAEANLAAQAKARGLSLDAFLRTIIATQAAAMDSARSVQAIPREGEELDRAIDELFDIVQVPPGVGEGAMRRDNWYR
Ga0209648_1005888653300026551Grasslands SoilMTITLELPPETEASLLAQARAQGLSLDAFVKTIIANQAATAASVKPPEPLPLRGEELDRAIDELFDAVQVPPGVGQGAMQRENWYR
Ga0209577_1048496213300026552SoilNEQALLAQAKARGLTLEIFLQIIITNQAAAAEAIKPLGNLAREGEELDRYIDEIFDTVQVSPGVGEGAMRRENLLSMILVVLFCPS
Ga0179587_1004318523300026557Vadose Zone SoilMTITLELPPEAEAKLVAQANARGLSLDAYLRTIITTQAAGMEPVESSQPLPREGEDLDRAIEELFDTVQVPPGVGEGAMRRENWYR
Ga0209116_107948733300027590Forest SoilGTMLEEATMTIVLELPPDAEASLIAQAKARGLSLDAFLRTIIASQAGAEAPVKSMRGLSCEGEDLDRAIDELFDAVPVPPGVGEGVMRRENWYR
Ga0208044_102818333300027625Peatlands SoilMTITLELQPETEASLLAQAQARGLSLDAYLRSIIISQAASAETARALPAFPRDGEDLDRAIDELFDTVEVPPGVGQGAMRRENWYR
Ga0208565_111221213300027662Peatlands SoilMTITLELQPETEASLLAQAQARGLSLDAYLRSIIISQAASAETARALPAFPRDGEDLDRAIDE
Ga0308309_1145154313300028906SoilMTITLELPPETEASLLAQAKARGLALDAFLKALIVNQAGTADAPGNLFQILQGEELDRAIDELFDTVQVPPGVGQGAMQRENWYR
Ga0311362_1072133023300029913BogVTIALELPPETEERLLAQAQARGLSLDAFVQTIIVSQASATEAVKPLGSYPRNGEELDRAVDEIFDAVQVPPGVGRGAMRRENWYR
Ga0311340_1078478323300029943PalsaMLKEATMTVTLELPPEIGATLASQAEARGLSLDAFLRVIIATQAAAMESMSSAQPLPREVEDLDRAIDELFDAVHVPPGVGEGALRRENWYR
Ga0311352_1058972713300029944PalsaMMTITLELPPEAEANLMAQAKARGVSLDAFLRGIIAAQAAAIESAKSAQALPREGEDLDRAIDELFDTVQVPPGVG
Ga0311338_1199250213300030007PalsaLMAQAKARGVSLDAFLRGIIAAQAAAIESAKSAQALPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0311372_1139057023300030520PalsaMLNEATMTISLELPPEVEADLAAQAKMRGLSLDAFLRAIITTQAAAFEPVKAAPSLPREGEDPDRLIEEIFDAVQVPPGVGEGAMSRENWYR
Ga0311355_1183988013300030580PalsaMLKEATMTVTLELPPEIGATLASQAEARGLSLDAFLRVIIATQAAAMESMSSAQPLPREVEDLDRAIDELFDAVHVPP
Ga0073994_1160768323300030991SoilMTITLELPPETEISLIAQADACGLTLDAYLQTVIANQAASTESVKALQSPPPQVEDSDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0170834_10260233023300031057Forest SoilMTITLELPPETEKNLLAQAEAQGLTLDAYLQTVIANQVAASEPVRVFRNPSTEKEDSDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0170822_1109871313300031122Forest SoilMTITLELPPETEKSLLAQAEAQGLTLDAYLQTVIANQVAASEPVRVFRNPPAEKEDSDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0170823_1329808513300031128Forest SoilMPGWPFNAYILRYAKREEEALMTITLELPPETEKNLLAQAEAQGLTLDAYLQTVIANQVAASEPVRVFRNPSTEKEDSDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0299914_1082400123300031228SoilMTITLELPPETEARLVAQAEARGLTLDAFLKTIIANQAGAAESAQSLSNLPGDSADIDRALDEVFDAVQVPPGVGQGAMRRENWYR
Ga0170824_10846149323300031231Forest SoilMTITLELPPETEKNLLAQAEAQGLTLDAYLQTVIANQVAASEPVRVFRNPPAEKEDSDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0302325_1005108423300031234PalsaMMTITLELPPEAEANLMAQAKARGVSLDAFLRGIIAAQAAAIESAKSAQALPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0302325_1005433463300031234PalsaMTISLELPPEVEADLAAQAKMRGLSLDAFLRAIITTQAAAFEPVKAAPSLPREGEDPDRLIEEIFDAVQVPPGVGEGAMSRENWYR
Ga0302325_1033323413300031234PalsaMTIILELPPETEAKLVAQAEARGLSLDAFLRTIITTQAAAEESVKSVQAIPQGGEERDRAIDELFDTVQLPPGVGEGAMRRENWYR
Ga0302325_1071012033300031234PalsaVPKRYDINQATITITLELPPEAEASLVAQAEACGLSLDAFLRALIKTQAAAVEPVNSAQALGRGGEDPDRAIDDVFDAVQVPPGVGEGAMRRENWYK
Ga0302324_10188889923300031236PalsaNSLRQRRLFAGTLVDGEPMTITLNLPPETEQTLLAQAKARGISLDVFLQTILTNQAAVEEAMKPMEDLRREGEELDRSIDEVFDTVPVPPGVGQGAMSRENWYR
Ga0302324_10280568023300031236PalsaMTISLELPPEVEADLAAQAKARGLSLDAFLRAIITTQAAAFEPVKSAQALPREGEDPDRLIDELFDAVQVPPGVGKGAMSRENWYR
Ga0170818_10123857423300031474Forest SoilMTITLELPPETEISLLAQAEAHGLTLAAYLQTVITNQAAATESVKVLQSPPAEEDSDQAIDELFDIVQVPPGVGEGAMRRENWYR
Ga0302326_10007026193300031525PalsaVKGHDSRIVVAGDWWLVAGGAEEVRCLKETMMTITLELPPEAEANLMAQAKARGVSLDAFLRGIIAAQAAAIESAKSAQALPREGEDLDRAIDELFDTVQVPPGVGEGAMRRENWYR
Ga0302326_1028120843300031525PalsaVPKRYDINQATITITLELPPEAEASLVAQAEACGLSLDAFLRALSKTQAAAVEPVNSAQALGRGGEDPDPAIDDIFDTVQVPPRGRRGGDAP
Ga0310686_10325745913300031708SoilRGTMLKEATMRITLELSPEAEASLVAQAKARGLSLETLLRTIITTHAAMESLKSVETLPRQGEDLDRAIDELFDTVQVSPGVGEGAMRRENWYR
Ga0310686_104402039193300031708SoilMTITLDLPPETEANLVAQAKARGLSLDAFLKTIITTHAAVVEAAKLVEDSPRAQRDLDSVIDELFDAVQLPPGIGEGAMRRENWYR
Ga0310686_10524764723300031708SoilMTITVELPPEAEANLAAQAKARGLSLDAFLRSIIATQAAATESVKSAQALPSEGGDLDRVIDELFDTVQVPPGVGEGAMRRESWYR
Ga0310686_10641844013300031708SoilMLEEATMTIVLELPPDAEASLIAQAKARGLSLDAFLRTIIASQAGAEAPVKSMRGLSCEGEDLDRAIDELFDAVPVPPGVGEGVMRRENWYR
Ga0310686_11962977823300031708SoilMTITLELPLEIEADITAQAKARGLSLDAFLRAIITAQAGALEPVKSAQTLPGEGEDPDRVIDELFDIVQIPPGIGEGAMRRENWYR
Ga0307479_1161846213300031962Hardwood Forest SoilMTITLELPPETEANLVAQAKARGLSLDVFLRTIITTQACAMEPVKSVHALPREGEDLDRAIEELFDTVQVPPGVGQGAMRRENWYR
Ga0311301_1004765773300032160Peatlands SoilMTITLEIPAETEAKLLAQAKSRGLTLDAFVKTIIADQAAAAEAARPPGNLLPQGEESDRAIDELFDTVQVPPGVGDGAMRRENWYR
Ga0348332_1212103233300032515Plant LitterTITVELPPEAEANLAAQAKARGLSLDAFLRSIIATQAAATESVKSAQALPSEGGDLDRVIDELFDTVQVPPGVGEGAMRRESWYR
Ga0348332_1216914923300032515Plant LitterTITLELPPEAEASLVAQAEARGLSLDAYLRAIIKTQAAAVEPVKPAQALRHGGEDPDRMIDDLFDAVQVPPGVGEGAMRRENWYK
Ga0335081_1022153953300032892SoilMTITLDLQPETEACLLAQAQARGLSLDAYLQSIIIGQAASAETAGSVPAFPRDGEDLDRAVDELFDTVAVPPGVGQGAMPRENWYR
Ga0334790_004250_259_5193300033887SoilMTITLELPPEAEANLVAQAKARGLSLDAFLRTLITTQAAALESARSVQPLPREGEERDRAIDELFDTVQIPPGIGEGAMRRENWYR
Ga0370515_0355245_360_6173300034163Untreated Peat SoilMLNEATMTITLELPPEAEASLVAQAEARGLSLDAFLRAIIKTQAAAEESANSAQALRRGGEDPDRAIDDIFDTVQVPPGVGEGAMR
Ga0370492_0119689_761_10213300034282Untreated Peat SoilMTITLTLPPETEERLVAQAKARGLSLDAFLQTIIANQAAAAEAMKPLQNLPREGEALDRLINELFDIVQVPPSVGQGAMRRENWYR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.