NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055159

Metagenome / Metatranscriptome Family F055159

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055159
Family Type Metagenome / Metatranscriptome
Number of Sequences 139
Average Sequence Length 57 residues
Representative Sequence MHHSFQSIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPGVGLAFRPDSV
Number of Associated Samples 115
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.29 %
% of genes near scaffold ends (potentially truncated) 80.58 %
% of genes from short scaffolds (< 2000 bps) 71.94 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.576 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.389 % of family members)
Environment Ontology (ENVO) Unclassified
(18.705 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.201 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 10.00%    Coil/Unstructured: 70.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF03444HrcA_DNA-bdg 81.29
PF00012HSP70 4.32
PF01025GrpE 3.60
PF05173DapB_C 0.72
PF00684DnaJ_CXXCXGXG 0.72
PF01041DegT_DnrJ_EryC1 0.72
PF00226DnaJ 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 81.29
COG0443Molecular chaperone DnaK (HSP70)Posttranslational modification, protein turnover, chaperones [O] 4.32
COG0576Molecular chaperone GrpE (heat shock protein HSP-70)Posttranslational modification, protein turnover, chaperones [O] 3.60
COG02894-hydroxy-tetrahydrodipicolinate reductaseAmino acid transport and metabolism [E] 0.72
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.72
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.72
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 0.72
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.72
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.72
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.72
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.58 %
UnclassifiedrootN/A19.42 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001151|JGI12713J13577_1016646All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300001593|JGI12635J15846_10663851All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300001661|JGI12053J15887_10173568All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300002245|JGIcombinedJ26739_100879688All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300002910|JGI25615J43890_1063633All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300004082|Ga0062384_100388001All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300004092|Ga0062389_100654098All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300005538|Ga0070731_11053597All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005541|Ga0070733_10555409All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300005610|Ga0070763_10129151All Organisms → cellular organisms → Bacteria1302Open in IMG/M
3300005712|Ga0070764_10900135All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005921|Ga0070766_10568528All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005994|Ga0066789_10004005All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae6468Open in IMG/M
3300005995|Ga0066790_10026295All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2544Open in IMG/M
3300006638|Ga0075522_10598430All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300007265|Ga0099794_10381497All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300009500|Ga0116229_10168145All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae1907Open in IMG/M
3300009627|Ga0116109_1134559All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300009633|Ga0116129_1009607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3836Open in IMG/M
3300009665|Ga0116135_1197866All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300009665|Ga0116135_1240487All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300009701|Ga0116228_11057338All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300009709|Ga0116227_10830700All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009709|Ga0116227_10874297All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300009759|Ga0116101_1187304All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300010396|Ga0134126_12466362All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300010865|Ga0126346_1363861All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300011270|Ga0137391_10939981All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300012096|Ga0137389_11214333All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012202|Ga0137363_11262103All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300012685|Ga0137397_10261833All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300012924|Ga0137413_11497920All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012944|Ga0137410_10280551All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300012944|Ga0137410_12026800All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300014165|Ga0181523_10788132All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300014167|Ga0181528_10452765All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300014201|Ga0181537_10353458All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300014201|Ga0181537_10827092All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300014201|Ga0181537_11170741All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300014495|Ga0182015_11044047All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300014499|Ga0182012_10951986All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300014501|Ga0182024_12221816All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300014658|Ga0181519_10952630All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300015193|Ga0167668_1016422All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300017955|Ga0187817_10030051All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3284Open in IMG/M
3300018034|Ga0187863_10689943All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300018035|Ga0187875_10361639All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300018038|Ga0187855_10223176All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300018086|Ga0187769_10146378All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1727Open in IMG/M
3300019886|Ga0193727_1024622All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2114Open in IMG/M
3300019890|Ga0193728_1035409All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2470Open in IMG/M
3300019890|Ga0193728_1094824All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300020021|Ga0193726_1124598All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300020034|Ga0193753_10033920All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2863Open in IMG/M
3300020579|Ga0210407_10343867All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300020579|Ga0210407_10497850All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300020580|Ga0210403_11276236All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300020583|Ga0210401_10684759All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300021086|Ga0179596_10175115All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300021170|Ga0210400_10468432All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300021178|Ga0210408_10592250All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → Ferrovum myxofaciens878Open in IMG/M
3300021180|Ga0210396_10036332All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4548Open in IMG/M
3300021180|Ga0210396_11489167All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300021405|Ga0210387_10247562All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1558Open in IMG/M
3300021406|Ga0210386_10428982All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300021477|Ga0210398_11622106All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300022726|Ga0242654_10212681All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium677Open in IMG/M
3300024225|Ga0224572_1088948All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300024279|Ga0247692_1031509All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300024288|Ga0179589_10156298All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300024323|Ga0247666_1002227All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4422Open in IMG/M
3300025463|Ga0208193_1021721All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1712Open in IMG/M
3300025527|Ga0208714_1015157All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1938Open in IMG/M
3300025634|Ga0208589_1022800All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1763Open in IMG/M
3300025664|Ga0208849_1088692All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300026214|Ga0209838_1019621All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300026215|Ga0209849_1063445All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300026294|Ga0209839_10008014All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4600Open in IMG/M
3300026304|Ga0209240_1156377All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300027037|Ga0209005_1027301All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300027860|Ga0209611_10518060All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300028036|Ga0265355_1013252All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300028775|Ga0302231_10472809All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300028801|Ga0302226_10278286All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300028801|Ga0302226_10424855All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300028801|Ga0302226_10427345All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300028906|Ga0308309_10314440All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300029907|Ga0311329_10822557All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300029944|Ga0311352_10938260All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300029944|Ga0311352_11255268All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300029954|Ga0311331_11428096All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300030013|Ga0302178_10317783All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300030056|Ga0302181_10052879All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2131Open in IMG/M
3300030056|Ga0302181_10138363All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300030503|Ga0311370_10615683All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300030549|Ga0210257_10901396All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300030646|Ga0302316_10140924All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300030646|Ga0302316_10247679All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300030707|Ga0310038_10517327All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300030916|Ga0075386_11863971All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300030940|Ga0265740_1047310All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031057|Ga0170834_108282198All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300031234|Ga0302325_10433166All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans2028Open in IMG/M
3300031258|Ga0302318_10715553All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300031524|Ga0302320_11276492All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300031708|Ga0310686_114795560All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300031715|Ga0307476_10991947All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300031715|Ga0307476_11159592All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300031788|Ga0302319_10407090All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300031902|Ga0302322_102671024All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300032174|Ga0307470_10204568All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300032805|Ga0335078_10458638All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1652Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.39%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.79%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa10.79%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.76%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated5.76%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.04%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.32%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog4.32%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.60%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.16%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.16%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.44%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.72%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.72%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.72%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.72%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.72%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.72%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.72%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.72%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.72%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001151Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009627Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10EnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025527Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025634Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026214Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)EnvironmentalOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027037Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028036Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2Host-AssociatedOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030549Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030646Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12713J13577_101664623300001151Forest SoilMPQEFKSIALVGNAKDLRVAECMLGLAAHFHARGLPVLVDPSVGLAFKAGSVVLCPEQSFATRADLIVAIG
JGI12635J15846_1066385123300001593Forest SoilMSHSFQSVALVGNAKDLRVAECMLSLAGHFHSQGVRALVDPGVGLAFRPDSVV
JGI12053J15887_1017356813300001661Forest SoilMSHSFKSIALVGNAKDLRVAECMLSLASHFYLKGVRALVDPGLGLAFRPDSVVPCPEQSFATRAD
JGIcombinedJ26739_10087968823300002245Forest SoilMSHSFESVALVGRPTDLRVAECMLSLAGHFHSVGVRTLVDPGVGLAFR
JGI25615J43890_106363323300002910Grasslands SoilMSQSFQSIALVGNAKDLRVAECMLSLAGHFHSQGVRALVDPGVGLAFRPDSVVPCPEQSFATR
Ga0062384_10038800123300004082Bog Forest SoilMPQSFQSIALVGRPTDLRVAECMLSLTAHFHAYGMRVLVDPSVALAFKAGSVE
Ga0062384_10050174013300004082Bog Forest SoilMPQVFKSIALVGNAKDLRVAECMLGLAAHFQVRGLPVLVDP
Ga0062389_10065409823300004092Bog Forest SoilMPQSFKSIALVGNAKDLRVAEVILSLAAHFHARGQRALIDPGVGLEFPPGSIVPCPEQSFATRAELII
Ga0070731_1105359713300005538Surface SoilMSKSFKSIALVGNVKDLRVAECMLSLAAHFHSRGQPALVDPGIGLEFPKSTVVACPEQAFASR
Ga0070733_1055540913300005541Surface SoilMPQVFKSIALVGNAKDLRVAECMLGLAAHFQACGVPVLVDPSVGLAFKAGSVVLCPEQSFATRADLIVA
Ga0070763_1012915113300005610SoilMTAFKSIALVGNAKDLRVAECMLSLVGHFQSRGQRALVDPDIGLAFPRDSIVSCPESAFA
Ga0070764_1090013523300005712SoilVPQLFKSIALVGNTKDLRVAECMLSLAGYFQGRGQPALVDPGVGIEFPHGTVVPCPEEAFADKAD
Ga0070766_1056852813300005921SoilMPHSFHSIALVGNAQDSRVAECMLSLASHFYSRGQRALVDPKVALEFPPDSVVRCPE
Ga0066789_1000400513300005994SoilMPQSFQCIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPDLGLPFGPDTVL
Ga0066790_1002629513300005995SoilMSHSFQSIALVGRPSDLRVAECMLSLASHLYSRGLCALVDPGLGLAFPPGSVVLC
Ga0075018_1048097023300006172WatershedsMSHSFQSIALVGNTKDLRVAECMQSLVGHFYSKGVRALVDPDVGLA
Ga0075522_1059843013300006638Arctic Peat SoilMSHSFQSIALVGNAKDLRVAECMLSLAGHFYSHKVRALVDPSVGLAFKPDSVVLCPEQSFAT
Ga0099794_1038149713300007265Vadose Zone SoilMHHSFQSIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPGVGLAFRPDSV
Ga0116229_1016814513300009500Host-AssociatedMSYVFKSIALVGNAKDPRVAECMLALAAHFHARGLHTLVDPGVGLAFPFDSVTFCPEQAFATRAELI
Ga0116229_1075025323300009500Host-AssociatedMSHTFETIALVGRPTDVRVAECMLSLAGHLLAKGLHTLVNPGVNL
Ga0116109_109568713300009627PeatlandMSAFKSIALVGNAKDQRVAECMLSLIGHFQSRGQRALVDPGVEL
Ga0116109_113455923300009627PeatlandMSHSFKSIALVGNAKDLRVAECMLSLSGHFHARGLCVMVDPSVGLAFPAGCVTVCP
Ga0116129_100960743300009633PeatlandMPQSFKSIALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPEVSLAFEPDSVAMCPEQSFATR
Ga0116135_119786613300009665PeatlandMSHSFKSIALVGNAKDLRVAECMLSLAGHFSARGLCVMVDPSVGLAFPAGCVTVCPEQSF
Ga0116135_124048713300009665PeatlandMPKSFKSIALVGNAKDLRVAECMLTLAGHFYARGQPALVDPGVGLEFPRNTVLACPEAAFASRAELI
Ga0116228_1105733813300009701Host-AssociatedMSHTFATIALVGRPTDLRVAECMLGLAAHFSSKGLRTLVDPGVDLKFPANSVEP
Ga0116227_1083070013300009709Host-AssociatedMSHTFKSIALVGNAKDLRVAECMLSLSGHFHARGLRAMVDPSVGLAFPAGSVAVCPGQSFATRADLIVA
Ga0116227_1087429713300009709Host-AssociatedMSHSFKSVALVGNAKDLRVAECMLSVAGHFHERGLCALVDPGVGLAFPPGTVVPCPEQSFATRAELIVSIGGDG
Ga0116227_1148565213300009709Host-AssociatedMSHGFKSIALVGRPTDPRVADCMLSLAAHFKSRGLRPMVDPGN
Ga0116101_118730413300009759PeatlandVTGSWRTCYKGDVPQSFKSIALVGNATDRRVAECMSSLAGYFVGRGQRALVDPGVGVEFPPDTVERCPQESFADKADLIV
Ga0099796_1012067323300010159Vadose Zone SoilMSHSFKSIALVGNALDLRVAECMLSLTGHLHARGLAPLVDPGVGLAF
Ga0134126_1246636213300010396Terrestrial SoilVTGPRRTCYKGDVPHSFKSIALVGNPKDLRVAECMLSLAGYFHGRGQRALVDPSVGIEFPPDTVVPCPQDFFAERADLIV
Ga0126346_136386113300010865Boreal Forest SoilMPHSFQSIALVGNAKDLRVAECMLGLAAHFQERGLSVLVDPGVGLAFKAD
Ga0137391_1093998123300011270Vadose Zone SoilMHHSFQSIALVGNAKDLRVAECMLSLAGHFHSQGVRTLVDPGVGLAFRPDSVVPCP
Ga0137389_1121433323300012096Vadose Zone SoilMSHSFQSIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPGVGLAFRPDSVVPCPEAS
Ga0137363_1126210323300012202Vadose Zone SoilMSQSFQSVALVGNAKDLRVAECMLSLAGHFQSQGVRALVDPGVGLAFRP
Ga0137397_1026183323300012685Vadose Zone SoilMSHSFKSIALVGNAEDLRVAECMLSLTGHLHARGLAPLVDPGVGLAFPPGSVAPCPE
Ga0137413_1149792013300012924Vadose Zone SoilMSHSFKSIALVGNALDLRVAECMLSLTGHLYARGLAPLVDPGVGLAFA
Ga0137419_1106485113300012925Vadose Zone SoilMPHSFQSIALVGNAKDLRVAECMLSLAAHFYSKGVRALVDPGVGL
Ga0137410_1028055113300012944Vadose Zone SoilMTHSFQSVALVGNAKDLRVAECMLSLAGHFYSQGVRALVDPGVGLAFRPDSVVPCPEAS
Ga0137410_1202680023300012944Vadose Zone SoilMHHSFQSIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPGVGLAFRPDSVVPWPEASFATRADLIIA
Ga0181523_1078813213300014165BogMPQSFKSVALIGNAKDSRVADGMLSLVSHFYARGQRTLVDPGVDLAFPQGSILPCPEA
Ga0181528_1045276513300014167BogMPHSFNSVALVGNAKDLRVAECMLSLVGHLRARGVSVLVEPGTGLAFPPDSVV
Ga0181537_1035345823300014201BogMGSCYKDACFMSHSFKSIALVGNAKDLRVAECMLSLAGHFFARGLCVMVDPSVGL
Ga0181537_1082709213300014201BogMTAFKSIALVGNAKDLRVAECMLSLIGHFQSRGRRALVDPGVELDFPRDSIVSCPESAFASRADLI
Ga0181537_1117074123300014201BogMSQSFRSIALVGNTQDLRVAECMLSLAGYFHTRGRQALIDPGVGLEFPADTVVRCAEESFATRADLIVAIG
Ga0182015_1104404713300014495PalsaMSHSFKSIALVGNANDLRVSECMLSLASHIYARGMRALVDPGVGLAFKPDSVVPCPEP
Ga0182012_1095198613300014499BogMSHSFKSIALVGNAKDLRVAECMLSLASHFYARGICALVDPGVGLAFPPDSVVPCPEQAFATRAELI
Ga0182024_1222181613300014501PermafrostMSHSFKSIALVGNADDLRVSECMLSLASHIYSRGLRALVDPRIAPSFEPDSVLPCSEPDLASRADL
Ga0181525_1008380033300014654BogMLLRTDIMPHTFKSIALVGNARDARVSECMLSLAGYVQTRGERALID
Ga0181519_1095263013300014658BogMSQSFKSIALVGNTKDLRVAECMLSLVVHFHSQGVRALVDPGVDLDFAPDT
Ga0167668_101642213300015193Glacier Forefield SoilMSHSFKSIALVGNALDLRVAECMLSLAGHFYSHGVRALVDPGVDLAFQPDSVEPCPEH
Ga0187817_1003005113300017955Freshwater SedimentMPQSFKSIAFVGNAKDLRVAECMLSLASHFYARGHRALIDPGVGLAFPPGSIVPCPEQSFATRAELIIAIG
Ga0187863_1068994313300018034PeatlandMTAFKSIALVGNARDVRVAECMQSLVGHFQLRGQRTLVDPDLGLEFPRGAV
Ga0187875_1036163923300018035PeatlandMLQRLTMTAFKSIALVGNARDLRVAECMQSLVGHFQLRGQRTLVDPDLGLEFPRGAVESC
Ga0187855_1022317613300018038PeatlandMSHSFQSIALVGRPSDLRVAECMLSLASHLYSRGLCALVDPGVGLSFPPGSVVICPEQSFATRAELI
Ga0187769_1014637833300018086Tropical PeatlandMPQSFKSIALVGNAKDLRVAECMLSLASHFHARGQRALIDPSVDLAFPPDSIVPCPEQSFASRAD
Ga0193727_102462243300019886SoilMPHSFQSVALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPSVGLAFKADSVVL
Ga0193728_103540913300019890SoilMSHSFKSIALVGNALDLRVAECMLSLTGHLHARGLAPLVDPGLGLAFAPGTVVPCPEQAF
Ga0193728_109482413300019890SoilMSHSFKSIALVGRPTDLRVAECMLSLASHFYARGLSALVDPGVGLAFPPDSVVL
Ga0193726_112459813300020021SoilMPHSFQSIALVGNAKDLRVAECMLGLAAHFHSRGVQVLVDPTVGLAFKADSVVLCPEQSFAT
Ga0193753_1003392013300020034SoilMPHSFQSIALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPSVGLAFKADSVVLCPEQSFATRADLIVA
Ga0210407_1034386723300020579SoilMPRSFQSIALVGNVKDLRVAECMLSLVGHFYSQGVRALVDPGVGLAFRPDSI
Ga0210407_1049785013300020579SoilMPHSFQSIALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPGVGLAFKANSVVLCPEQSFATRADLIV
Ga0210403_1127623613300020580SoilMTHSFQSIALVGNAKDLRVAECMLGLAGHFYSKGVRALVDPGVGLAFQPDSV
Ga0210401_1068475913300020583SoilMPQSFKSIALVGNAKDSRVAECMLSLAAHFSARGQRALIDPGVGLRFPP
Ga0179596_1017511523300021086Vadose Zone SoilMSHSFKSIALVGNAEDLRVAECMLSLTGHLHARGLAPLVDPGLGLAFAPGTVVPCPEQA
Ga0210400_1046843223300021170SoilMSHSFQSIALVGNAKDLRVADCMLSLAGHFHTKGVRPLVDPGLGLAFPPGSVVPCPEQSFATRADLIIAIGGD
Ga0210408_1059225023300021178SoilMSQSFQSIALVGRPTDLRVAECMLSLAGHFHSHGVRTLVDPGVGLAFRPDSVVPCP
Ga0210396_1003633213300021180SoilMSHSFQSIALVGNAKDLRVAECMLSLAAHFDARGVRALVDPGIGLKFKPDSVVPCPEQEFVTRANLIIAIGG
Ga0210396_1148916713300021180SoilMSQSFQSIALVGNTKDSRVAECMLSLAAHFHAKGVRALVDPEVGLAFRPETVLPC
Ga0210387_1024756233300021405SoilMPQVFKSIALVGNATDLRVAECMLGLAAHFQVRGLPVLVDPSVGLAFKAG
Ga0210386_1042898223300021406SoilMPHSFQSIALVGNAKDLRVAECMLSLAGHFHSKGLRALVDPGVGLAFAP
Ga0210398_1138613023300021477SoilMPQVFKSIALVGNSNDLRVAECMLGLAAHFQARGLPVLVDPSVGL
Ga0210398_1162210623300021477SoilMSHSFESIALVGNAKDLRVAECMLSLAGHFHSKGVCALVDPDVGLAFKPDSVLYCPEQSFAARADLIVAI
Ga0210409_1079939123300021559SoilMSQVFKSIALVGNAKDLRVAECMLGLAAHFQARGMPVLVDPSVGLAFKA
Ga0210409_1112884223300021559SoilMPQSFKSIALVGNAKDLRVAECMLSLAAHFSARGQRALIDPGV
Ga0242654_1021268113300022726SoilMPKSFKSIALVGNAKDLRVAECMLTLAGHFYARGQPALVDPGVGLEFPHNTVLVCPEAAFASSAELIVAIG
Ga0224572_108894823300024225RhizosphereMTAFKSIALVGNAKDLRVAECMLSLVGHFQSRGRRALVDPGVGLEFPPESIVSCPESAFASRADLIVAIG
Ga0247692_103150923300024279SoilMPPSFQSVAMVGNAKDLRVAECMLSLASHLHAQGLRALVDPAVGLAFHPDSIVPCPESSLATRADL
Ga0179589_1015629823300024288Vadose Zone SoilMTHSFQSVALVGNAKDLRVAECMLSLAGHFYSQGVRALVDPGVGLAFRPDSVVPCPEASFATRADLII
Ga0179589_1022217613300024288Vadose Zone SoilMTHSFKSIALVGNAKDLRVSECMLGLAAHFQARGVPVLVDPAVGLAF
Ga0179589_1037476323300024288Vadose Zone SoilMSHSFKSIALVGNAEDLRVAECMLSLTGHLHARGLAPLVDPGVGLAF
Ga0247666_100222753300024323SoilMPPSFQSVAMVGNARDLRVAECMLSLASHLHAQGLRALVDPAVGLAFHPDSIVPCPETSLATRA
Ga0208193_102172113300025463PeatlandMPQSFKSIALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPEVSLAFEPDSVAMCP
Ga0208686_102443333300025500PeatlandMPHPFKSIALVGNAKDSRVSDYMLSLAGHLFGRGLRALVDPRNGLGFP
Ga0208714_101515743300025527Arctic Peat SoilMPQSFKSIALIGNARDSRVAECMLSLVSHLSARGQRALVDPDIALAFPPDGILPCP
Ga0208219_109068723300025625Arctic Peat SoilMSQSFQSIALVGNTKDLRVAECMLSLAAHFHSKGVRALVDPDV
Ga0208589_102280033300025634Arctic Peat SoilMSHSFQSIALVGNAKDLRVAECMLSLAGHFYSHKVRALVDPGVGLAFRPDSVVLCPEQSFATRAD
Ga0208849_108869223300025664Arctic Peat SoilMPHSFHSIAMVGRTADLRVAECMLSLAAHFKARGVQALVDPSVDLTFPEDSVVACPEASFATR
Ga0209838_101962113300026214SoilMAHAFQSIALIGNAKDLRVAECMLSLTAHFQARGVRPLVDPSVGLAFKADSVIPCPEQAFATRADL
Ga0209849_106344523300026215SoilMTHSFKSIALVGNARDLRVAECMLGLAAHFQARGVAVLVDPAVGLAFKADSVLICPEQSFATR
Ga0209839_1000801413300026294SoilMSHSFQSIALVGRPSDLRVAECMLSLASHLYSRGLCALVDPGLGLAFPP
Ga0209240_115637723300026304Grasslands SoilMSQSFQSIALVGNAKDLRVAECMLSLAGHFHSQGVRALVDPGVGLAFRPDSVVPCPEQSFATRTDLII
Ga0257161_110994313300026508SoilMSHSFKSIALVGNALDLRVAECMLSLTGHLHARGLAPLVDPGLGLA
Ga0209005_102730123300027037Forest SoilMTHSFKSIALVGNAKDLRVAECMLGLAAHFQARGVPVMVDPGVGLAFKAGSVMLCPEQSFAT
Ga0208988_110116523300027633Forest SoilMSHSFQSIALVGNAKDLRVAECMLSLAGHFHTKGVRPLVDPGL
Ga0209611_1027062413300027860Host-AssociatedMPHPFNSIALVGNAKDSRVSECMLSLAGHLFSRGLRALVDNRG
Ga0209611_1051806013300027860Host-AssociatedMSNSFKSIALVGNTTDLRVAECMLSLAHHLYSRGIRALVDPGTGLAFPPGSVEPCPEQSFATRAQLIMAIGGD
Ga0209701_1016358913300027862Vadose Zone SoilMSQTFQSIALVGRPTDLRVAECMLSLAGHFHSRGVRTLVDPGVGLAF
Ga0209380_1015005813300027889SoilMPHSFHSIALVGNAQDSRVAECMLSLASHFYSRGQRALVDPKVALEF
Ga0265355_101325223300028036RhizosphereMPQEFKSIALVGNAKDLRVAECMLGLAAHFHARGLPVLVDPSVGLAFKA
Ga0302231_1047280923300028775PalsaMPQVFKSIALVGNAKDLRVAECMLGLAAHFQARGVPVLVDPSVGLAFKAGSVVLCPEQSFATRADLI
Ga0302226_1027828613300028801PalsaMPHSFHSIALVGNAQDPRVAECMLSLASHFYSRGQRALVDPKVALEFPPDSVVRCPEQSFATR
Ga0302226_1042485513300028801PalsaMPQSFQSIALVGNAKDLRVAECMLSLAGHFHSKGVRALVDPGVGLPFAPDSVLYCPEQCFAA
Ga0302226_1042734523300028801PalsaMTAFTSIALVGNAKDLRVAECMLSLIGHFQSRGQRALVDPGVSLALPRDAVVSCPESEFASRADLI
Ga0308309_1031444023300028906SoilMSQSFQSIALVGNTKDSRVAECMLSLAAHFHSKGVRALVDPEVGLAFRP
Ga0311368_1011344513300029882PalsaMTAFKSIALVGNAKDVRVAECMLSLVGHFQVRGRRALVDPGVGL
Ga0311329_1082255713300029907BogMSHSFQSIALVGNAADSRVSECMLSVASHIYGLGMRALVDPGVGLAFA
Ga0311359_1101711113300029914BogMSHPFKSIALVGNAKDSRVSECMLNLAGHLFARGLRALVDTRNTLAFAA
Ga0311352_1093826023300029944PalsaMSHSFKSIALVGNAKDLRVAECMLSLAAHFFSRGLCVMADPSVGLAFPAGCVTLCPEQAF
Ga0311352_1125526813300029944PalsaMSHSFKSIALVGNAGDLRVSECMLSLASHIYGRGIRPLVDPGVGLAFKPDTVVPCPEPAFATR
Ga0311331_1142809623300029954BogMTAFTSIALVGNAKDLRVAECMLSLIGHFQSSGRRALVDPGVDLAFPHDSIVSCPESAFASRADLIVAIG
Ga0302178_1031778313300030013PalsaMPHSFHSIALVGNAQDPRVAECMLSLASHFYSRGQRALVDPKVALEFPPDSVVRCPEQSFATRAELIIAI
Ga0302181_1005287913300030056PalsaMPHSFHSIALVGNAQDPRVAECMLSLASHFYSRGQRALVDPKVALEFPPDSVVRCPEQSF
Ga0302181_1013836313300030056PalsaMTAFTSIALVGNAKDLRVAECMLSLIGHFQSRGQRALVDPGVSLALPRDA
Ga0302184_1031966713300030490PalsaMPHSFHSIALVGNAQDPRVAECMLSLASHFYSRGQRALVDPKV
Ga0311370_1061568323300030503PalsaMSHTFQTIALVGNAKDLRVAECMLSLTGHFHSKGVRALVDPGVGLAFPPDSVVACPEQAFAAQADLIIAIGGD
Ga0210257_1090139623300030549SoilMPQVFKSIALVGNAKDLRVAECMLGLAAHFQARGLPVLVDPSVGLAVKTEKGK
Ga0302316_1014092413300030646PalsaMGRFSMSEALRRTCYKDHMTAFKSIALVGNAKDVRVAECMLSLVGHFQVRGQRALVDPGVGLEFPRGAVESCPESA
Ga0302316_1024767913300030646PalsaMSHTFQTIALVGNAKDLRVAECMLSLTGHFHSKGVRALVDPGVGLAFPPDSVVACPEQAFAAQADLIIA
Ga0310038_1051732723300030707Peatlands SoilMPQSFLSVALVGNARDLRVAECMLSLAGHLYARGQRALVDPGVDLAFPPD
Ga0075386_1186397123300030916SoilMTHSFKSIALVGNAKDLRVSECMLGLAAHFQARGVQVLVDPAVGLAFKAGSVVMCPEQSFATRAD
Ga0265740_104731013300030940SoilMPQSFQSIALVGNAKDLRVAECMLSLAGHFHSKGVRALVDPGVGLPFAPDSVLY
Ga0170834_10828219823300031057Forest SoilMPQVFKSIALVGNAADLRVAECMLGLAAHFQARGVPVLVDPSVGLAFKAGS
Ga0302325_1043316613300031234PalsaMSHSFQSIALVGRPTDLRVAECMLSLAGHFHSRGVRALVDPGVGLAFRPDSVLP
Ga0302318_1071555313300031258BogMSHSFQSIALVGNAKDSRVAECMLSLVGHFQSQGLTPLVDPDVGLAFRPDSVLPCPQASFATRADLL
Ga0302320_1127649223300031524BogMPHPFKSIALVGRAKDARVAECMLSLARHLLAKGLRALVDTHVGLPFPAGS
Ga0310686_10048730213300031708SoilMSHSFQSIALVGNAKDLRVAECMLSLAGHFFSRGVRALVDPGVG
Ga0310686_11479556013300031708SoilMPHSFHSIALVGNAQDSRVAECMLSLASHFYSRGQRALVDPKVALEFPPDSV
Ga0307476_1099194723300031715Hardwood Forest SoilMPKSFKSIALVGNAKDLRVAECMLTLAGHFHARGQPALVDPGVGLEFPHNTVLA
Ga0307476_1115959213300031715Hardwood Forest SoilMPQVFKSIALVGNATDLRVAECMLGLAAHFQVRGLPVLVDPSVGLAFKAGSVVLCPEQSFATRADLIVAI
Ga0302319_1040709013300031788BogVTGLRRTCYKGDVPQSFKSIALVGNAKDLRVAECMLSLAGYFMGRGQRALVDPGVGIEFPPGAVVPCPEQSFADKADLI
Ga0307478_1119483623300031823Hardwood Forest SoilMPKSFKSIALVGNAKDLRVAECMLTLAGHFYARGQPALVDPEVGL
Ga0302322_10267102423300031902FenMSHSFQCIALVGNTKDLRVAECMLSLAGHFNARGVRALVDPSVGLAFRPDSVVPCP
Ga0307470_1020456823300032174Hardwood Forest SoilMPHSFQSIALVGNAKDLRVAECMLGLAAHFHARGVPVLVDPNVGLAFKADSVV
Ga0307471_10022794533300032180Hardwood Forest SoilMTHSFQSVALVGNAKDLRVAECMLSLAGHFYSKGVRALVDPGVG
Ga0335078_1045863833300032805SoilMSKPFTSIALVGNAKDLRVAECMLSLADYFRARGQPPLVDPGVGLEFPKETVVSCPEAD
Ga0334804_171465_401_5293300033818SoilMPHSFQSIALVGNAKDLRVAECMLSLAAHFHSKGVRALVDPAV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.