Metagenome / Metatranscriptome Family F055154

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	70 residues
Representative Sequence	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFS
Number of Associated Samples	109
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.30 %
% of genes near scaffold ends (potentially truncated)	30.22 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.626 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.072 % of family members)
Environment Ontology (ENVO)	Unclassified (24.460 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.20% Coil/Unstructured: 97.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00498	FHA	3.60
PF00574	CLP_protease	1.44
PF03734	YkuD	1.44
PF10117	McrBC	0.72
PF14707	Sulfatase_C	0.72
PF12697	Abhydrolase_6	0.72
PF13649	Methyltransf_25	0.72
PF14534	DUF4440	0.72
PF02517	Rce1-like	0.72
PF14023	DUF4239	0.72
PF13884	Peptidase_S74	0.72
PF01479	S4	0.72
PF13414	TPR_11	0.72
PF00589	Phage_integrase	0.72
PF01471	PG_binding_1	0.72
PF04191	PEMT	0.72
PF07978	NIPSNAP	0.72
PF13620	CarboxypepD_reg	0.72
PF03167	UDG	0.72
PF00127	Copper-bind	0.72
PF04055	Radical_SAM	0.72
PF13730	HTH_36	0.72
PF00501	AMP-binding	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.44
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.44
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.44
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.72
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.63 %
Unclassified	root	N/A	32.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.63 %
Unclassified	root	N/A	32.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.63 %
Unclassified	root	N/A	32.37 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	40.29 %
Unclassified	root	N/A	32.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	40.29 %
Unclassified	root	N/A	32.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.37 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	30.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.37 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig36790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
2166559005\|cont_contig48244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
2170459002\|FZY7DQ102IWQVK	Not Available	530	Open in IMG/M
2170459004\|F62QY1Z01CQABG	Not Available	523	Open in IMG/M
2170459005\|F1BAP7Q01BZMI5	Not Available	525	Open in IMG/M
2170459005\|F1BAP7Q02F9RNS	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
2170459009\|GA8DASG02HCY5Q	Not Available	512	Open in IMG/M
2170459010\|GIO7OMY01DQQ3I	Not Available	530	Open in IMG/M
2170459011\|GI3SL7401A1IG0	Not Available	522	Open in IMG/M
2170459023\|GZGNO2B02IA8GN	Not Available	506	Open in IMG/M
2170459024\|GZTSFBX01DL781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
2170459024\|GZTSFBX01EFGLL	Not Available	525	Open in IMG/M
2199352024\|deeps__Contig_194025	Not Available	568	Open in IMG/M
3300000550\|F24TB_10214241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300000559\|F14TC_102176712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10141255	Not Available	582	Open in IMG/M
3300000709\|KanNP_Total_F14TBDRAFT_1014297	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300002899\|JGIcombinedJ43975_10108974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300004114\|Ga0062593_100669017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300004114\|Ga0062593_101851820	Not Available	665	Open in IMG/M
3300005174\|Ga0066680_10216221	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300005181\|Ga0066678_10413840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	895	Open in IMG/M
3300005186\|Ga0066676_10032201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2860	Open in IMG/M
3300005186\|Ga0066676_10240622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1178	Open in IMG/M
3300005294\|Ga0065705_10009028	All Organisms → cellular organisms → Bacteria	3607	Open in IMG/M
3300005295\|Ga0065707_10004089	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300005295\|Ga0065707_10886855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005332\|Ga0066388_100008127	All Organisms → cellular organisms → Bacteria	7811	Open in IMG/M
3300005332\|Ga0066388_105033023	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005332\|Ga0066388_106756153	Not Available	578	Open in IMG/M
3300005440\|Ga0070705_101642384	Not Available	542	Open in IMG/M
3300005446\|Ga0066686_10181053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1406	Open in IMG/M
3300005451\|Ga0066681_10024424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3134	Open in IMG/M
3300005456\|Ga0070678_101632127	Not Available	606	Open in IMG/M
3300005536\|Ga0070697_101776955	Not Available	552	Open in IMG/M
3300005557\|Ga0066704_10027685	All Organisms → cellular organisms → Bacteria → Proteobacteria	3423	Open in IMG/M
3300005569\|Ga0066705_10724478	Not Available	598	Open in IMG/M
3300005576\|Ga0066708_10431268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300005764\|Ga0066903_101910215	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1137	Open in IMG/M
3300005764\|Ga0066903_102244815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300005764\|Ga0066903_106608309	Not Available	604	Open in IMG/M
3300006046\|Ga0066652_101698513	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006172\|Ga0075018_10738956	Not Available	535	Open in IMG/M
3300006175\|Ga0070712_101585362	Not Available	573	Open in IMG/M
3300006852\|Ga0075433_10213195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1716	Open in IMG/M
3300007076\|Ga0075435_101957302	Not Available	515	Open in IMG/M
3300009012\|Ga0066710_102739062	Not Available	701	Open in IMG/M
3300010043\|Ga0126380_10002295	All Organisms → cellular organisms → Bacteria	7547	Open in IMG/M
3300010043\|Ga0126380_11915814	Not Available	540	Open in IMG/M
3300010046\|Ga0126384_10174173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1679	Open in IMG/M
3300010048\|Ga0126373_10043497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3962	Open in IMG/M
3300010301\|Ga0134070_10276490	Not Available	635	Open in IMG/M
3300010321\|Ga0134067_10037363	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300010329\|Ga0134111_10475251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300010333\|Ga0134080_10098132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1202	Open in IMG/M
3300010360\|Ga0126372_12525877	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010361\|Ga0126378_10081406	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300010376\|Ga0126381_103418998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300010398\|Ga0126383_11305326	Not Available	816	Open in IMG/M
3300010398\|Ga0126383_13017727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300010398\|Ga0126383_13119602	Not Available	541	Open in IMG/M
3300012202\|Ga0137363_10089029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2319	Open in IMG/M
3300012202\|Ga0137363_11501455	Not Available	565	Open in IMG/M
3300012349\|Ga0137387_10244505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1293	Open in IMG/M
3300012351\|Ga0137386_11278246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012355\|Ga0137369_10059974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3273	Open in IMG/M
3300012357\|Ga0137384_10711955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300012469\|Ga0150984_119020007	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300012884\|Ga0157300_1038011	Not Available	714	Open in IMG/M
3300012897\|Ga0157285_10122726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300012905\|Ga0157296_10123907	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300012907\|Ga0157283_10177722	Not Available	652	Open in IMG/M
3300012929\|Ga0137404_10030715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3970	Open in IMG/M
3300012960\|Ga0164301_10344047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1022	Open in IMG/M
3300012977\|Ga0134087_10459055	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012986\|Ga0164304_10420943	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300015053\|Ga0137405_1228685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3256	Open in IMG/M
3300015201\|Ga0173478_10731453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300016270\|Ga0182036_10936783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300016319\|Ga0182033_11568732	Not Available	595	Open in IMG/M
3300016357\|Ga0182032_10718453	Not Available	840	Open in IMG/M
3300016357\|Ga0182032_11787237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300016371\|Ga0182034_10955056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300018431\|Ga0066655_10006508	All Organisms → cellular organisms → Bacteria	4832	Open in IMG/M
3300018431\|Ga0066655_10149575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1384	Open in IMG/M
3300018431\|Ga0066655_11063761	Not Available	563	Open in IMG/M
3300018482\|Ga0066669_10012074	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300018482\|Ga0066669_10174955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1611	Open in IMG/M
3300019356\|Ga0173481_10718210	Not Available	542	Open in IMG/M
3300019885\|Ga0193747_1000550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12174	Open in IMG/M
3300019887\|Ga0193729_1182781	Not Available	731	Open in IMG/M
3300020170\|Ga0179594_10397811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300021560\|Ga0126371_10086764	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300025910\|Ga0207684_11171754	Not Available	637	Open in IMG/M
3300025915\|Ga0207693_10076553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2620	Open in IMG/M
3300026326\|Ga0209801_1022215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3099	Open in IMG/M
3300026369\|Ga0257152_1004745	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300026498\|Ga0257156_1028425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1128	Open in IMG/M
3300026537\|Ga0209157_1007491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7705	Open in IMG/M
3300027371\|Ga0209418_1098536	Not Available	524	Open in IMG/M
3300027402\|Ga0207465_102228	Not Available	530	Open in IMG/M
3300027526\|Ga0209968_1076761	Not Available	599	Open in IMG/M
3300030917\|Ga0075382_11663859	Not Available	510	Open in IMG/M
3300030945\|Ga0075373_11652377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300030945\|Ga0075373_11659381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3624	Open in IMG/M
3300030967\|Ga0075399_11463908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300030968\|Ga0075376_11488529	Not Available	518	Open in IMG/M
3300030969\|Ga0075394_12022512	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300030973\|Ga0075395_11432080	Not Available	613	Open in IMG/M
3300031057\|Ga0170834_100441538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300031057\|Ga0170834_102084022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300031057\|Ga0170834_102671379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1278	Open in IMG/M
3300031128\|Ga0170823_10689316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300031231\|Ga0170824_104247119	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031231\|Ga0170824_111684321	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031231\|Ga0170824_116446328	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300031446\|Ga0170820_13941174	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031446\|Ga0170820_15997006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	569	Open in IMG/M
3300031469\|Ga0170819_11767195	Not Available	533	Open in IMG/M
3300031474\|Ga0170818_104368878	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300031573\|Ga0310915_10561078	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031719\|Ga0306917_10178746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1594	Open in IMG/M
3300031720\|Ga0307469_10800698	Not Available	864	Open in IMG/M
3300031740\|Ga0307468_100352214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1099	Open in IMG/M
3300031744\|Ga0306918_10114075	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300031890\|Ga0306925_10282318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1787	Open in IMG/M
3300031945\|Ga0310913_10566224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	806	Open in IMG/M
3300031946\|Ga0310910_11042157	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032180\|Ga0307471_101127259	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300032180\|Ga0307471_104044550	Not Available	518	Open in IMG/M
3300032205\|Ga0307472_100627726	Not Available	953	Open in IMG/M
3300032205\|Ga0307472_100773592	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300032261\|Ga0306920_100169094	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300032261\|Ga0306920_101866958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	846	Open in IMG/M
3300033412\|Ga0310810_10237056	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300033412\|Ga0310810_10279201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1813	Open in IMG/M
3300033412\|Ga0310810_10459512	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300033412\|Ga0310810_10550644	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.96%
Host-Associated	Host-Associated	3.60%
Engineered	Engineered	1.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.24%
Plants	Host-Associated → Plants	3.60%
Modeled	Engineered → Modeled	1.44%
Aquatic	Environmental → Aquatic	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	1.44%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.44%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.44%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	5.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	2.16%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	1.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000709	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027402	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-12 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030968	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0790.00002810	2166559005	Simulated	MKTILLLHDDSGSAKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGWHQRLD
cont_0244.00003430	2166559005	Simulated	MKAILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTLGSASGS
E1_00537490	2170459002	Grass Soil	LKPIPLLHDESGSPKPILQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVGRFAATTYDERDRGE
E4B_02140140	2170459004	Grass Soil	MKTILLLHDETGSPKPGFQDVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSAGFVTCGD
E41_02486420	2170459005	Grass Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASDGTPGCNCDRWGHPYPDRVEHNVQAQPNLST
E41_01004200	2170459005	Grass Soil	MKPNPLLHDESGSPKPILQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTS
F47_01888220	2170459009	Grass Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHSVQVQPKLESTHAHWGLTSSR
F62_05805190	2170459010	Grass Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPNRVEHNVQAQPNLSTPGSASVRDVS
F64_00737230	2170459011	Grass Soil	PKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTLGSASGS
FA3_02162000	2170459023	Grass Soil	MKPIPLLHDESGSPKPILQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVGRFAATTYDERDRGE
FD1_04805780	2170459024	Grass Soil	MKTILLLHDESGSPKRRFQNVAGCKVTQRASEETPGCNCDRWGHPYPDRVEHNVQGQPKLSKHQRIGD
FD1_00825560	2170459024	Grass Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPNRVEHNVQAQPNLSTPGSASGSWTCRD
deeps_03698810	2199352024	Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS
F24TB_102142413	3300000550	Soil	MKTILLLHDESGSPKPRFQNVACSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS*
F14TC_1021767122	3300000559	Soil	MKTILLLHESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKVTTIGTRACPTGND*
AF_2010_repII_A1DRAFT_101412551	3300000597	Forest Soil	MKAILLSHDESGSPQPRFQNVARVKATQRPSEGTPGCNCDRWGHPSPDYVEHNVQVQPNLSTSVAAKK*
KanNP_Total_F14TBDRAFT_10142972	3300000709	Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFS
JGI1027J12803_1040836852	3300000955	Soil	MKTILLLHDESASPESRLQNVADSKVTQRPSERTAGCNCDRWGHPFPDYVERQDPSATEVIDFRTFQK*
JGIcombinedJ43975_101089742	3300002899	Soil	MKTILLHDESGSPKPRLQNVAGSKVTQPPSEGTPGCNCDRWGHPSPDCVEHNVQVQ
Ga0062593_1006690173	3300004114	Soil	MKTVLLLLDENGSLKPRLQNVAGGKVTQRPSEGTPGCTCDRWGHPSPDCLEHNVQVQLKLSFSTSVPQPTEWQNVR*
Ga0062593_1018518201	3300004114	Soil	HDESGSPKPRFQKVAGCKVTKHATEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSKRQRIGE*
Ga0066680_102162211	3300005174	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEYNVQVQPKLSTSVPAKNEVSAWNT*
Ga0066678_104138402	3300005181	Soil	MKTILLLHDESGSPEPRLQNVAGSKVRQRPSEGTPGCSCDRWGHPSPDCVEHNVQAQLKVSTLGSVSGSVVRVSRLSHNLLR*
Ga0066676_100322015	3300005186	Soil	MKTILLLHDESGSPKPRLQNVADSKVTQRPSEGTFGCSCDRWGHPSPDCVEHNVQVQPKLSTSVPAKNEVSAWNT*
Ga0066676_102406222	3300005186	Soil	MKTILLLHDESGSPKPRFQNGAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGSWRAVTGSASAL*
Ga0065705_100090282	3300005294	Switchgrass Rhizosphere	MKTILLLHDESGSPKPRFQNVAGGKVTQRASEGTPDCNCDRWGXPYPDRVEHNVQAQPNLSTPGSAXGS*
Ga0065707_100040892	3300005295	Switchgrass Rhizosphere	MKTILLLHDESGSPKPRFQNVAGGKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS*
Ga0065707_108868551	3300005295	Switchgrass Rhizosphere	MKTILLLDDENGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHYVQVQLKLSSSTSVP*
Ga0066388_1000081276	3300005332	Tropical Forest Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDYVEHNVQVQPEVIDFNTCQK*
Ga0066388_1050330231	3300005332	Tropical Forest Soil	MKAILLLHDKSGSPKSRSQNVPGSKMTQRPSEGTPGCNCDRWGHPSPGCVEHNVQVQPS
Ga0066388_1067561532	3300005332	Tropical Forest Soil	MNALLLLHDESDSPGDVAGVKVTQRPSEGTPGCNCDRWGHPSPDYVDRNVQAQPKSSTLVLPEK*
Ga0070705_1016423841	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILLLYDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPAKNEVSAWNT*
Ga0066686_101810533	3300005446	Soil	MKTILLLHNESGSPKPRSQNVAGCKVTQRASEGTPGCNCDRWGHPYPDRAEHIVQAQPNLSTPGSAFRVS*
Ga0066681_100244243	3300005451	Soil	MKTILLLHDESGSPKPRLQNVAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQPNLSAPGSASGSVVRVSRLSHNLLR*
Ga0070678_1016321271	3300005456	Miscanthus Rhizosphere	MKTILLLDDENGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVP*
Ga0070697_1017769552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKIVQYFSAIG
Ga0066704_100276855	3300005557	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPAKNEVSAWNT*
Ga0066705_107244781	3300005569	Soil	MKTILLLHDESGSPKPRLQNVAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQPNLSAPGSASGSVVRVSRLSHNL
Ga0066708_104312681	3300005576	Soil	MKTILLLHDESGSPEPRLQNVAGSKVRQRPSEGTPGCSCDRWGHPSPDCVEHNVQAQLKVSTLGSVSGSVAVLAVYLITYSDERSL*
Ga0066903_1019102152	3300005764	Tropical Forest Soil	MKTILLLHDENRLPKPRFQNVASSKMAQRASAGTSGCNCDRWGHPYADRVEHNVQVQPNLSTPGSARFCDVP*
Ga0066903_1022448152	3300005764	Tropical Forest Soil	MKTVLLLHDEKGSPKPRLRNVAGGKVTPRPSEGTPGCTCDRWGHPFPDCLEHNVQVQLKLSFSNSVPQTTKWQRIGKLV*
Ga0066903_1066083092	3300005764	Tropical Forest Soil	MKTILLLHDESGSPKPRLQNVAGSKVRQRPCEGTPGCNCDRWGHPSPDCVEHNVQVQ
Ga0066652_1016985132	3300006046	Soil	MKTILLLHDESGSPKPRLQNVACSKVIQRPSEGTPGCSCDRWGHPSPDCFEHNVQVQLKLSF
Ga0075018_107389562	3300006172	Watersheds	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPRLSTSVPSKNEVSAWNT*
Ga0070712_1015853621	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILLLYDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPFPDCVEHNVQVQPKLSTSLPAKNEVSAWNT*
Ga0075433_102131952	3300006852	Populus Rhizosphere	MKTVLLLHDESGSPKPRLQNVAGGKVTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQLKLSFSTSVP*
Ga0075435_1019573021	3300007076	Populus Rhizosphere	MKTVLLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSDSPLKHGLQSP*
Ga0066710_1027390621	3300009012	Grasslands Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQLQLKL
Ga0126380_100022951	3300010043	Tropical Forest Soil	MKTILLLHDEGGSPKARLQNIAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPAKNEVSAWNT*
Ga0126380_119158141	3300010043	Tropical Forest Soil	MKTVLLLHDEKGSPKPRLQNVAEGKVTTRTSEGTPGCTCDRWGHPFPDCLEHNVQVQLKLSFGPSVP*
Ga0126384_101741734	3300010046	Tropical Forest Soil	MKTVLLLHDENGSPKPRLQNVAGGKVTPRPSEGTPGCTCDRWGHPFPDCLEHNVQVQLKLSFSTSVPQPTKWQRIGKLV*
Ga0126373_100434974	3300010048	Tropical Forest Soil	MKTILLLHDKSRSPKPRSQNVAGRKVTHRASEGMPGCSCDRWGHPSPDCVEHNVQLQLKLLFSTSVP*
Ga0134070_102764902	3300010301	Grasslands Soil	MKTILLLHDESGSPKPRLQNIAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQAKLSIQYLPKNEVSSWNT*
Ga0134067_100373633	3300010321	Grasslands Soil	MKTILLLHDESGSPKPRLQNVAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQ
Ga0134111_104752512	3300010329	Grasslands Soil	MKTILLLHDESGSPKPRLQNVAGSKVIERPSEGTPGCSCDRWGHPSPDCFEHNVQVQLKLSFSTSVP*
Ga0134080_100981321	3300010333	Grasslands Soil	MKTILLLHDESGSPKPRFQNGAGSKVTQRASEGTPGCNCDRWGHPYPDRAEHIVQAQPNLSTPGSAFRVS*
Ga0126372_125258771	3300010360	Tropical Forest Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDYVEHNVQVQPEV
Ga0126378_100814063	3300010361	Tropical Forest Soil	MKTILLLQDESGSPRLRLQNAAGSKVTQRPSEGMPDCSCDRWGHPSPDWVEHNVQVQLKFSFNTSALKPIE*
Ga0126381_1034189982	3300010376	Tropical Forest Soil	MKTILWLHDKSKSPNPRLQNVAGSKVTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQLKLSFSASVP*
Ga0126383_113053261	3300010398	Tropical Forest Soil	MKTILLLHDESRSPNARLHNVGGTKVTQRHSAGTPGCNCDLWGHPLPDCVADNVQRQLKLAVSTS
Ga0126383_130177271	3300010398	Tropical Forest Soil	TILLLHEESGSLNARLQNVPGSKVTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQLKLSFSASVP*
Ga0126383_131196021	3300010398	Tropical Forest Soil	MKTILLLHDESGPPKPRFQNVAGSKVTQRASEGMPGCNCDRWGHPSPDCVEHNVQVRRSVQECFGAVVPT*
Ga0137363_100890293	3300012202	Vadose Zone Soil	MKPNPLLHDESGSPKPILQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVP*
Ga0137363_115014551	3300012202	Vadose Zone Soil	MKTILLLHDESGSPKPILQNVAGSKVTQRPGEGTPGCSCDRWGHPSPDCVEHDVQV
Ga0137387_102445051	3300012349	Vadose Zone Soil	MKTILLLHDESGSPKPRFQNGAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGSWRAVT
Ga0137386_112782461	3300012351	Vadose Zone Soil	MKTILLLRDESGSPKPRLQNIPGSKLTQRPSEGTPGCSCDRWGHPSPDCFEHNVH
Ga0137369_100599744	3300012355	Vadose Zone Soil	MKTILLLHDESGSPKPRFQNVACSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGSVVRVSRLSHNLLR*
Ga0137384_107119553	3300012357	Vadose Zone Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPAKK*
Ga0150984_1190200072	3300012469	Avena Fatua Rhizosphere	MKTILFLNDKTGSPKLRLQNFTGDKVTVRSNEGTPGSNCDRWGHLCPDGVEHNVQVQA
Ga0157300_10380111	3300012884	Soil	MKTILLLHDESGSPKPRFQKVAGCKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS*
Ga0157285_101227261	3300012897	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPEVIDFSTCQK*
Ga0157296_101239071	3300012905	Soil	MKTILLLHDESGSPKPRFQKVAGCKVTKHATEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSKRPRIGE*
Ga0157283_101777221	3300012907	Soil	MKTILLLHDESGSPGPRFQKVAGCKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS*
Ga0137404_100307152	3300012929	Vadose Zone Soil	MKTILLLHDESGSPEPRLQNVAGSKVRQRPSEGTPGCSCDRWGHPSPHCVEHNVQAQLKLSTPGSASGSVVRVSRLSHNLLR*
Ga0164301_103440472	3300012960	Soil	MKTILLLHDESGSPKPRFRNVAGSKVTQRANEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTSGSASGS*
Ga0134087_104590551	3300012977	Grasslands Soil	LMKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQLQLKLSFITSVPQPTEWQRIGN*
Ga0164304_104209431	3300012986	Soil	MKTVLLLDDESGSPKPRLQNVAGSKVIQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQLKLSFSTSVP*
Ga0137405_12286852	3300015053	Vadose Zone Soil	MKTILLLHDESGSPEPRLQNVAGSKVRQRPSEGTPGCSCDRWGHPSPDCVEHNVQAQLKLSTPGSASDSVVRVSRLSHNLLR*
Ga0173478_107314531	3300015201	Soil	MKTILLLHDESGSPKPRFQKVAGCKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASAS*
Ga0182036_109367831	3300016270	Soil	MKTILLLHDESGSRKPRFQNVADSKVTQRPSEGMPGCNCDRWGHPYPDRVEHNVQVQPKLSTPRSARVRDVPD
Ga0182033_115687321	3300016319	Soil	MKPILLLHDESGSPKPRSQNLAGSKVTQRPSEGTPAPTCDRWGHPSPDCVEHNVQVQVKLSFSTSVP
Ga0182032_107184531	3300016357	Soil	MTTIPFLHDESGSRKSRLQNVAGSKVGQRPSEGMPGCNCDRWGHPSPDCVEHNVQVQPKLSTRA
Ga0182032_117872371	3300016357	Soil	MKTILLLHDESGSRKPRFQNVADSKVTQRASEGTLGCNCDRWGHPYPDRVEHNVQVQPILSTSGS
Ga0182034_109550562	3300016371	Soil	MKTALLLHDQNGLPKPRSQNVAGGKVTRRPSEGTPGCTCDRWGHPSPDCVEHNVQVQLKLSFSTSVP
Ga0066655_100065085	3300018431	Grasslands Soil	MKTILLLHDESGSPKPRLQNVAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQPNLSAPGSASGSVVRVSRLSHNLLR
Ga0066655_101495752	3300018431	Grasslands Soil	MKTILLLHNESGSPKPRSQNVAGCKVTQRASEGTPGCNCDRWGHPYPDRAEHIVQAQPNLSTPGSAFRVS
Ga0066655_110637611	3300018431	Grasslands Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQLQLKLSFITSIRQATEWQ
Ga0066669_100120743	3300018482	Grasslands Soil	MKTILLLHDESGSRKPRLQNVAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQPNLSAPGSASGSVVRVSRLSHNLLR
Ga0066669_101749551	3300018482	Grasslands Soil	MKTILLLHDESGSPKPRFQNGAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGSWRAVTGSASAL
Ga0173481_107182101	3300019356	Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASGGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS
Ga0193747_100055013	3300019885	Soil	MKPIPLLHDESGSPKPRFQNVAGSKVTQHASEGTLGCNCDRWGHPHPDRVEHNVQAQQNLSFSTSVP
Ga0193729_11827812	3300019887	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRRSEGTPGCNCDRWGHPSPDCVEHNVQ
Ga0179594_103978112	3300020170	Vadose Zone Soil	MKAILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQAKLSIQYLPKNEVSSWNT
Ga0126371_100867645	3300021560	Tropical Forest Soil	MKTILLLQDESGSPRLRLQNAAGSKVTQRPSEGMPDCSCDRWGHPSPDWVEHNVQVQLKFSFNTSALKPIE
Ga0207684_111717541	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILFLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDWVEHNVQVQPKLSTSVPAKNEVSPWNT
Ga0207693_100765535	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILLLYDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLST
Ga0209801_10222153	3300026326	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEYNVQVQPKLSTSVPAKNEVSAWNT
Ga0257152_10047451	3300026369	Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQPPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVPQPTE
Ga0257156_10284253	3300026498	Soil	MKTILLLHDESGSPKPRLQNIAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQAKLSIQYLPKNEVSAWNT
Ga0209157_10074918	3300026537	Soil	MKTILLLHDESGSPKPRLQNAAGSKVRQRPSEGMPGCNCDRWGHPYPDRVEHNVQAQPNLSAPGSASGSVVRVSRLSHNLLR
Ga0209418_10985361	3300027371	Forest Soil	MKTILLLHDESGSPKPRLQNAAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQLQLKLSFITSVP
Ga0207465_1022281	3300027402	Soil	MKTILLLHDERGSPKPRLQNVAGSKVTQRPTEGTPGCNCDRWGHPSPDCVDQHVQLRPKLSTSVPAKMEV
Ga0209968_10767613	3300027526	Arabidopsis Thaliana Rhizosphere	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPEVIDFSTCQK
Ga0075382_116638592	3300030917	Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQRASEGTLGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS
Ga0075373_116523771	3300030945	Soil	MKTILLLHDDSGSAKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQVQLKLSFSTSVP
Ga0075373_116593815	3300030945	Soil	MKTILLLDDESGSPKLRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVP
Ga0075399_114639081	3300030967	Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPRLRFGFVTCRD
Ga0075376_114885292	3300030968	Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASGGTLGCNCDRWGHPYPDRVEHNVQ
Ga0075394_120225122	3300030969	Soil	MKTILLLHDDSGSAKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGSRRAVTSNASAL
Ga0075395_114320802	3300030973	Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVKAQPNLSTPGSAFFGFRDVP
Ga0170834_1004415381	3300031057	Forest Soil	MKTILLLDDESGSPKLRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSF
Ga0170834_1020840221	3300031057	Forest Soil	MKTILLLHDESGSPNPKFQNVADSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPGSASGS
Ga0170834_1026713792	3300031057	Forest Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSLPAKNEVSAWNT
Ga0170823_106893161	3300031128	Forest Soil	MKTILLLHDESGSPNPKFQNVADSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSKWQRIGN
Ga0170824_1042471191	3300031231	Forest Soil	MKPILLLHDESGSPKPRFQNLAGSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNL
Ga0170824_1116843211	3300031231	Forest Soil	MEPISLLHDESGSPKPSLQNVAASKVTQRPGEGTPGCSCDRWGHPSPDCVEHNVQVQL
Ga0170824_1164463282	3300031231	Forest Soil	MKTILLLHDESGSPKPRFQNVAGCKVTQRASEGAPGCNCDRWGHPYPDRVEHNVQAQPNLSTLGSAFFGFRDVP
Ga0170820_139411741	3300031446	Forest Soil	METILLLHDESGSPKPRFQKVAGCKVTQRASEETPGCNCDRWGHPYPDRVEHNVQAQPNLSKRQRIGD
Ga0170820_159970061	3300031446	Forest Soil	MKPILLLHDESGSPKPRLQNVADSKVTQRPSKGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTS
Ga0170819_117671951	3300031469	Forest Soil	MKTILLLHDESGSPKPRLQNIAGSKRTQRPSEPTPGCNCDRWGHPYPDRVEHNVKAQPNLSTPGSAFFGFRDVP
Ga0170818_1043688782	3300031474	Forest Soil	MKTILLLHDESGSPKPRLQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCAEHNVQVQLKLSFSTSVPEATEWQRRGN
Ga0310915_105610781	3300031573	Soil	MKTALLLHDQNGLPKPRSQNVAGGKVTQRPSEGTPGCTCDRWGHPSPDCVEHNVQVQLKLSFSTSVP
Ga0306917_101787462	3300031719	Soil	MKTALLLHDQNGLPKPRSQNVAGGKVTQRPSEGTPGCTCDRWGHPSPDCVEHNVQVQLKLSFSTSVPQSTEWERIGN
Ga0307469_108006981	3300031720	Hardwood Forest Soil	MKPILLLHDESGSPKPRSQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVPLATKREEHR
Ga0307468_1003522141	3300031740	Hardwood Forest Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQHASEGTPGCNCDRWGHPHPDRVEHNVQAQPNLSTPGSASG
Ga0306918_101140752	3300031744	Soil	MKTALLLHDQNGLPNPRSQNVAGGKVTQRPSEGTPGCTCDRWGHPSPDCVEHNVQVQLKLSFSTSVPQSTEWERIGN
Ga0306925_102823183	3300031890	Soil	MKTILLLPDKSRSANPRLQNVAGCKVIQRPSEGTPGCSCDRWGHPSPDYVEHNVQVQLKLSFRPSVP
Ga0310913_105662242	3300031945	Soil	METVLSLHDESGSRKSRLQNVAGSKVGQRPSEGMPGCNCDRWGHPSPDCVEHNVQVQPKLSTRAPCDLL
Ga0310910_110421571	3300031946	Soil	MKTALLLHDQNGLPKPRSQNVAGGKVTQRPSEGTPGCTCDRWGHPSPDCVEHNVQVQLKLSFSTS
Ga0307471_1011272591	3300032180	Hardwood Forest Soil	MKSIPLLHDKSESPKPRLQNAAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKL
Ga0307471_1040445501	3300032180	Hardwood Forest Soil	MKTILLLHDESGSPKLRLQNIAGSKLTQRPSEGTPGCNCDRWGHPYPDCVEHNVQVQAKLSIQYLPKNEVSAWNT
Ga0307472_1006277261	3300032205	Hardwood Forest Soil	MKPILLLHDESGSPKPGSQNVAGSKVTQRPSEGTPGCSCDRWGHPSPDCVEHNVQVQLKLSFSTSVPLATKREEHR
Ga0307472_1007735921	3300032205	Hardwood Forest Soil	MKTILLLHDESGSPKPRFQNVAGSKVTQRASEGTPGCNCDRWGHPHPDRVEHNVQAQPNLSTPGSASGS
Ga0306920_1001690942	3300032261	Soil	MKAILLLHDESGPRKPRLQNVVGAKVTQRPSVGMPGCNCDRWGHPYPYRVDHDFQMQPKLSTPGLRSGS
Ga0306920_1018669582	3300032261	Soil	MEIVLSLHDESGSRKSRLQNVAGSKVGQRPSEGMPGCNCDRWGHPSPDCVEHNVQVQPKLSTRAPCDLL
Ga0310810_102370563	3300033412	Soil	MKTILLLHDESGSPKPRLQTVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPP
Ga0310810_102792012	3300033412	Soil	MKTILLLHESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKVTTIGTRACPTGND
Ga0310810_104595122	3300033412	Soil	MKTILLLHDESGSPKPRLQNVAGSKLTQRPSEGTPGCNCDRWGHPSPDCVEHNVQVQPKLSTSVPAKNEVSAWNT
Ga0310810_105506441	3300033412	Soil	MKTILLLHDESGSPKPRFQNVACSKVTQRASEGTPGCNCDRWGHPYPDRVEHNVQAQPNLSTPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055154

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences