Metagenome / Metatranscriptome Family F055128

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055128
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	100 residues
Representative Sequence	MAKRVLLATRDLLFRSKLGGVVAAAGADVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRDLLNT
Number of Associated Samples	114
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.71 %
% of genes near scaffold ends (potentially truncated)	30.94 %
% of genes from short scaffolds (< 2000 bps)	61.15 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.683 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.899 % of family members)
Environment Ontology (ENVO)	Unclassified (46.763 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.676 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 17.19% Coil/Unstructured: 45.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.0: automated matches	d2rjna_	2rjn	0.81815
c.23.1.1: CheY-related	d1ny5a1	1ny5	0.81787
c.23.1.0: automated matches	d6wsha1	6wsh	0.81717
c.23.1.1: CheY-related	d1zgza1	1zgz	0.81687
c.23.1.1: CheY-related	d1m5ta_	1m5t	0.81499

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF03129	HGTP_anticodon	35.25
PF00011	HSP20	25.18
PF00850	Hist_deacetyl	8.63
PF13378	MR_MLE_C	3.60
PF06262	Zincin_1	2.88
PF02595	Gly_kinase	2.16
PF01475	FUR	1.44
PF13738	Pyr_redox_3	1.44
PF00579	tRNA-synt_1b	0.72
PF02769	AIRS_C	0.72
PF00270	DEAD	0.72
PF00271	Helicase_C	0.72
PF04389	Peptidase_M28	0.72
PF02239	Cytochrom_D1	0.72
PF00903	Glyoxalase	0.72
PF00203	Ribosomal_S19	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	35.25
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	35.25
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	35.25
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	35.25
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	25.18
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	17.27
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG1929	Glycerate kinase	Carbohydrate transport and metabolism [G]	2.16
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	1.44
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	36.69 %
Unclassified	root	N/A	4.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	36.69 %
Unclassified	root	N/A	4.32 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	10.07 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.91 %
Unclassified	root	N/A	4.32 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	10.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.91 %
Unclassified	root	N/A	4.32 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.07 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.91 %
Unclassified	root	N/A	4.32 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.91 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	7.19 %
Unclassified	root	N/A	4.32 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.72 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.91 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7.19 %
Unclassified	root	N/A	4.32 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.72 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1008016	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300002908\|JGI25382J43887_10019372	All Organisms → cellular organisms → Bacteria	3601	Open in IMG/M
3300002908\|JGI25382J43887_10031478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2867	Open in IMG/M
3300002909\|JGI25388J43891_1002697	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300002914\|JGI25617J43924_10076900	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300002916\|JGI25389J43894_1077342	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300005166\|Ga0066674_10066780	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300005171\|Ga0066677_10001421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8503	Open in IMG/M
3300005172\|Ga0066683_10032016	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300005172\|Ga0066683_10162251	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300005174\|Ga0066680_10007976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5271	Open in IMG/M
3300005175\|Ga0066673_10001848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7536	Open in IMG/M
3300005175\|Ga0066673_10065491	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300005178\|Ga0066688_10001667	All Organisms → cellular organisms → Bacteria	8935	Open in IMG/M
3300005179\|Ga0066684_10008532	All Organisms → cellular organisms → Bacteria	4821	Open in IMG/M
3300005180\|Ga0066685_10217159	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300005180\|Ga0066685_10473664	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005180\|Ga0066685_11131355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	510	Open in IMG/M
3300005406\|Ga0070703_10009926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2686	Open in IMG/M
3300005440\|Ga0070705_100006170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5869	Open in IMG/M
3300005444\|Ga0070694_101350168	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005444\|Ga0070694_101377978	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005445\|Ga0070708_100061816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3347	Open in IMG/M
3300005445\|Ga0070708_100851601	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005446\|Ga0066686_10433140	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005518\|Ga0070699_100046874	All Organisms → cellular organisms → Bacteria	3740	Open in IMG/M
3300005518\|Ga0070699_101708041	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005536\|Ga0070697_100004938	All Organisms → cellular organisms → Bacteria	10235	Open in IMG/M
3300005545\|Ga0070695_100279252	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005546\|Ga0070696_100143446	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300005549\|Ga0070704_100561316	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005553\|Ga0066695_10164660	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300005553\|Ga0066695_10723170	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005557\|Ga0066704_10035800	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300005560\|Ga0066670_10001452	All Organisms → cellular organisms → Bacteria	8116	Open in IMG/M
3300005576\|Ga0066708_10023521	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300006046\|Ga0066652_101326723	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006173\|Ga0070716_100775581	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006755\|Ga0079222_10032002	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300006791\|Ga0066653_10161026	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300006794\|Ga0066658_10347937	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300006796\|Ga0066665_10861019	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006852\|Ga0075433_10004186	All Organisms → cellular organisms → Bacteria	11194	Open in IMG/M
3300006854\|Ga0075425_101440669	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300006871\|Ga0075434_100008664	All Organisms → cellular organisms → Bacteria	9468	Open in IMG/M
3300006954\|Ga0079219_10549860	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009038\|Ga0099829_10128288	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300009038\|Ga0099829_10134153	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300009088\|Ga0099830_10342702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1200	Open in IMG/M
3300009088\|Ga0099830_10379459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1140	Open in IMG/M
3300009089\|Ga0099828_10086699	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300009089\|Ga0099828_10240264	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300009090\|Ga0099827_10794699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	819	Open in IMG/M
3300009137\|Ga0066709_100007384	All Organisms → cellular organisms → Bacteria	9488	Open in IMG/M
3300010301\|Ga0134070_10365271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	563	Open in IMG/M
3300010303\|Ga0134082_10000737	All Organisms → cellular organisms → Bacteria	11326	Open in IMG/M
3300010304\|Ga0134088_10600586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300010320\|Ga0134109_10000470	All Organisms → cellular organisms → Bacteria	7957	Open in IMG/M
3300010320\|Ga0134109_10367408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	568	Open in IMG/M
3300010326\|Ga0134065_10202041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	720	Open in IMG/M
3300010329\|Ga0134111_10018863	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300010333\|Ga0134080_10488749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300010335\|Ga0134063_10389956	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	682	Open in IMG/M
3300010336\|Ga0134071_10000153	All Organisms → cellular organisms → Bacteria	19955	Open in IMG/M
3300010373\|Ga0134128_10496187	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300010396\|Ga0134126_10742370	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300011270\|Ga0137391_10200758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1734	Open in IMG/M
3300011271\|Ga0137393_10076361	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300011271\|Ga0137393_10616326	Not Available	931	Open in IMG/M
3300012096\|Ga0137389_10062438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2855	Open in IMG/M
3300012199\|Ga0137383_10169096	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300012199\|Ga0137383_10320868	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300012204\|Ga0137374_10085838	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300012207\|Ga0137381_10687187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	890	Open in IMG/M
3300012208\|Ga0137376_10033691	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300012208\|Ga0137376_10940569	Not Available	741	Open in IMG/M
3300012209\|Ga0137379_10646666	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300012210\|Ga0137378_10047206	All Organisms → cellular organisms → Bacteria	3866	Open in IMG/M
3300012211\|Ga0137377_11665291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	560	Open in IMG/M
3300012285\|Ga0137370_10014323	All Organisms → cellular organisms → Bacteria	3862	Open in IMG/M
3300012353\|Ga0137367_10205531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1426	Open in IMG/M
3300012355\|Ga0137369_11126560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300012356\|Ga0137371_10359751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1131	Open in IMG/M
3300012359\|Ga0137385_10511954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300012363\|Ga0137390_10762858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	927	Open in IMG/M
3300012410\|Ga0134060_1151478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	820	Open in IMG/M
3300012532\|Ga0137373_10479866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	953	Open in IMG/M
3300012917\|Ga0137395_10546038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300012929\|Ga0137404_11440443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300012972\|Ga0134077_10156056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	913	Open in IMG/M
3300015264\|Ga0137403_10071997	All Organisms → cellular organisms → Bacteria	3508	Open in IMG/M
3300015356\|Ga0134073_10034533	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300015358\|Ga0134089_10130208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	982	Open in IMG/M
3300015358\|Ga0134089_10338423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	632	Open in IMG/M
3300017656\|Ga0134112_10000044	All Organisms → cellular organisms → Bacteria	22422	Open in IMG/M
3300017659\|Ga0134083_10298429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	683	Open in IMG/M
3300018431\|Ga0066655_10088128	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300018431\|Ga0066655_10210442	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300018433\|Ga0066667_10062942	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300018433\|Ga0066667_10650445	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300018468\|Ga0066662_10039208	All Organisms → cellular organisms → Bacteria	2908	Open in IMG/M
3300018482\|Ga0066669_11220922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300021046\|Ga0215015_10727807	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300021046\|Ga0215015_10792045	Not Available	595	Open in IMG/M
3300021086\|Ga0179596_10029995	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300022724\|Ga0242665_10182238	Not Available	682	Open in IMG/M
3300025885\|Ga0207653_10004273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4487	Open in IMG/M
3300025910\|Ga0207684_10039130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4024	Open in IMG/M
3300025910\|Ga0207684_10425772	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300025922\|Ga0207646_10001572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	27945	Open in IMG/M
3300025939\|Ga0207665_10011420	All Organisms → cellular organisms → Bacteria	5834	Open in IMG/M
3300026277\|Ga0209350_1011656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2818	Open in IMG/M
3300026298\|Ga0209236_1240669	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300026301\|Ga0209238_1068001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1255	Open in IMG/M
3300026313\|Ga0209761_1284392	Not Available	589	Open in IMG/M
3300026314\|Ga0209268_1009256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4060	Open in IMG/M
3300026324\|Ga0209470_1283012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300026326\|Ga0209801_1000002	All Organisms → cellular organisms → Bacteria	362283	Open in IMG/M
3300026332\|Ga0209803_1000073	All Organisms → cellular organisms → Bacteria	56261	Open in IMG/M
3300026527\|Ga0209059_1339982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300026528\|Ga0209378_1056756	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300026536\|Ga0209058_1087572	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300026536\|Ga0209058_1234664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	666	Open in IMG/M
3300026537\|Ga0209157_1127154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1172	Open in IMG/M
3300026540\|Ga0209376_1056416	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300026551\|Ga0209648_10038499	All Organisms → cellular organisms → Bacteria	4142	Open in IMG/M
3300026551\|Ga0209648_10043495	All Organisms → cellular organisms → Bacteria	3875	Open in IMG/M
3300027725\|Ga0209178_1182723	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300027846\|Ga0209180_10015344	All Organisms → cellular organisms → Bacteria	4006	Open in IMG/M
3300027862\|Ga0209701_10022686	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300027862\|Ga0209701_10111373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1701	Open in IMG/M
3300027875\|Ga0209283_10561137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	728	Open in IMG/M
3300027903\|Ga0209488_10018746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5024	Open in IMG/M
3300031720\|Ga0307469_10002198	All Organisms → cellular organisms → Bacteria	7756	Open in IMG/M
3300031720\|Ga0307469_10179997	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300031820\|Ga0307473_11125995	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300031962\|Ga0307479_10754740	Not Available	950	Open in IMG/M
3300032180\|Ga0307471_100051429	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300032205\|Ga0307472_101403693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.84%
Host-Associated	Host-Associated	2.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.84%
Plants	Host-Associated → Plants	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.73%
Loam	Environmental → Terrestrial → Soil → Loam	15.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.16%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.16%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10080161	3300002557	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPAATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI*
JGI25382J43887_100193723	3300002908	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLNR*
JGI25382J43887_100314786	3300002908	Grasslands Soil	TRSNRCASPPIGSRHTSRSGLAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLNR
JGI25388J43891_10026972	3300002909	Grasslands Soil	MPRQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
JGI25617J43924_100769002	3300002914	Grasslands Soil	MSGPGAAPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVPNSEVAAALGDLLR*
JGI25389J43894_10773422	3300002916	Grasslands Soil	MPRQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVXADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
Ga0066674_100667801	3300005166	Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLNR*
Ga0066677_100014212	3300005171	Soil	MLRPYGVPLMPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066683_100320162	3300005172	Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLSR*
Ga0066683_101622511	3300005172	Soil	MLRPYGLPLMPMAKRVLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066680_100079767	3300005174	Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATEKIGELVGRGIPVLAYGAHVRPELLRSARDAGALAVPNSQVEARLRDLLKQ*
Ga0066673_100018483	3300005175	Soil	LFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
Ga0066673_100654911	3300005175	Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLN
Ga0066688_100016676	3300005178	Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATETIGELVGRGIPVLAYGAHVRPELLRSARDAGAMAVPNSQVEARLRDLLKQ*
Ga0066684_100085324	3300005179	Soil	MPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066685_102171593	3300005180	Soil	FRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066685_104736642	3300005180	Soil	RSMPRQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
Ga0066685_111313551	3300005180	Soil	MLRPDGVPLMAMAKRVLLATRDLLFRSKLGAVVAAAGGHVSRDEAACDLAVLELGGPEAVERIGELARRGIPVLAYGSHVQAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0070703_100099262	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRDLLNA*
Ga0070705_1000061702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAGCDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVHVELLRAARDAGATAVPNSQVEAQLRDLLT*
Ga0070694_1013501681	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLLRSKLGGVVAAAGAEVSRDEAGCDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVHVELLRAARDAGATAVPNSQVEAQLRDLLT
Ga0070694_1013779781	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRDLLNA*
Ga0070708_1000618165	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLLRSKLGGVVAAAGAEVSRDEAGCDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVHVELLRAARDAGATAVPNSQVEAQLRDLLT*
Ga0070708_1008516012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRELLKA*
Ga0066686_104331402	3300005446	Soil	MAKRVLLATRDLLFRSKLGGVVAAAGAEVSRDETACDLAVLELSGPGATERIGELVRRGIPVLAYGSHVEVELLRTAREAGATAVPNSQVEERLRDLLNT*
Ga0070699_1000468745	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPN
Ga0070699_1017080411	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSRDEAACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0070697_1000049384	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAKRVLLATRDLLFRSKLGAVVSAGGAAVSRDEAACDLAVLELGIPGAAERIGELVRRGIPVIAYGSHVHAELLRGAREAGATAVPNSQVEACLRELLNT*
Ga0070695_1002792523	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PSRRRSSMAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRDLLNA*
Ga0070696_1001434463	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSRDEAACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEA
Ga0070704_1005613162	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSQDEAACDLAVLELGGSGATDRIAELVRRGIPVLAYGSHVQVEQLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0066695_101646602	3300005553	Soil	MLRPYGVPLMPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGEFARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066695_107231702	3300005553	Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI*
Ga0066704_100358006	3300005557	Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATEKIGELVGRGIPVLAYGAHVRPELLRSARDAGAMAVPNSQVEARLRDLLKQ*
Ga0066670_100014523	3300005560	Soil	MLRPYGLPLMPMAKRVLLGTRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0066708_100235211	3300005576	Soil	RQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
Ga0066652_1013267232	3300006046	Soil	TRSNRCASPPIGSRHTSRSGLAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPAATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI
Ga0070716_1007755812	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVFLIAPDLLFRSKLGVVIAESGAEVSRDETASDLVVIELGDARAIDRIGQLVERGVPVLAYGAHVRPELLRAARDAGAVA
Ga0079222_100320024	3300006755	Agricultural Soil	VAKRVLLVTADLMFRSKLGSVVAAAGGEVTRDESACDLAVLELGEGPFVERLGDLVQRGIPVLAYGSHVRPEVLRAARETGATAVPNSQVAERLRKLLETK*
Ga0066653_101610262	3300006791	Soil	YATATRSNRCASPPIGSRHTSRSGLAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLSR*
Ga0066658_103479371	3300006794	Soil	MLRPYGVPLMPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQ
Ga0066665_108610191	3300006796	Soil	SKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI*
Ga0075433_100041863	3300006852	Populus Rhizosphere	MAKRVLVATRDLLFRSKLGGVVAAAGGVVSRDEGACDLAVLELDGPGATQRIGELVRHGIPVLAYGSHVHVELLRAARDAGAMAVPNSQVEERLRDLLNT*
Ga0075425_1014406691	3300006854	Populus Rhizosphere	SPMAKRVLVATRDLLFRSKLGGVVAAAGGVVSRDEGACDLAVLELDGPGATQRIGELVRHGIPVLAYGSHVHVELLRAARDAGAMAVPNSQVEERLRDLLNT*
Ga0075434_1000086644	3300006871	Populus Rhizosphere	MAKRVLVATRDLLFRSKLGGVVAAAGGVVSRDEGACDLAVLELDGPGATQRIGELVRQGIPVLAYGSHVHVELLRAARDAGAMAVPNSQVEERLRDLLNT*
Ga0079219_105498602	3300006954	Agricultural Soil	MGKRVFLATRDLLFRAKLGGAVAAAGAEVTRDEGTSDLVVLDLADPAALGRIGDLVQRGVAVLAYGAHVEPDVLRAARAAGATAVPNSEVERRLRDLLNA*
Ga0099829_101282885	3300009038	Vadose Zone Soil	RSKLGGVVAAAGAEVSRDEGACDLAVLELGGLGATDRIAELVRRGIPVLAYGSHVQVDLLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0099829_101341533	3300009038	Vadose Zone Soil	MPKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEGACDLAVLDLGGLGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDVLTK
Ga0099830_103427023	3300009088	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDVLTK*
Ga0099830_103794592	3300009088	Vadose Zone Soil	VPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVP
Ga0099828_100866993	3300009089	Vadose Zone Soil	VPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVPNSEVAAALGDLLR*
Ga0099828_102402642	3300009089	Vadose Zone Soil	MPKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELAGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0099827_107946992	3300009090	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAELSREEAACDLAVLELAGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0066709_1000073848	3300009137	Grasslands Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATETIGELVGRGIPVLAYGAHVRPELLRSARDAGALAVPNSQVEARLRDLLKQ*
Ga0134070_103652712	3300010301	Grasslands Soil	MPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGEFARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0134082_1000073715	3300010303	Grasslands Soil	LLGTRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0134088_106005861	3300010304	Grasslands Soil	MLRPYGVPLMAMAKRVLLATRDLLFRSKLGAVVAAAGGHVSRDEAACDLAVLELGGPEAVERIGELARRGIPVLAYGSHVQAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0134109_100004708	3300010320	Grasslands Soil	MAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0134109_103674082	3300010320	Grasslands Soil	RDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLSR*
Ga0134065_102020412	3300010326	Grasslands Soil	LSKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI*
Ga0134111_100188634	3300010329	Grasslands Soil	VLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ*
Ga0134080_104887492	3300010333	Grasslands Soil	MTKRVWLATRDLLFRSKLGGIVAAAGADLSRDEAACDLAGVELGGSGATERIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRELLIG*
Ga0134063_103899561	3300010335	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPAATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLNR*
Ga0134071_1000015320	3300010336	Grasslands Soil	MPRQVFLATRDLVFRSKLARVVDAAGAEVTRDEAACELAVLEIESAGSTARIKTLVARGTSVLAYGSHVRPDLLRSAREAGATAVPNSQVEERLRELLGAADPGPAARG*
Ga0134128_104961874	3300010373	Terrestrial Soil	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEGACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRELLKA*
Ga0134126_107423703	3300010396	Terrestrial Soil	LLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRDLLNA*
Ga0137391_102007583	3300011270	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSRDEAACDLAVLELGAPGATDRIAELVRRGVPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDVLTK*
Ga0137393_100763615	3300011271	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSRDEAACDLAVLELGAPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0137393_106163262	3300011271	Vadose Zone Soil	MSGPGAAPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRA
Ga0137389_100624385	3300012096	Vadose Zone Soil	MPKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEGACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDVLTK*
Ga0137383_101690964	3300012199	Vadose Zone Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLTR*
Ga0137383_103208682	3300012199	Vadose Zone Soil	MLRPYRVPLVPVAKRVLLATRDLLFRSKLGGIVAAAGGEVSRNEAACDLAVLELGGPGATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLNR*
Ga0137374_100858382	3300012204	Vadose Zone Soil	MAKRVLLATRDLLFRSKLGGVVAAAGADVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRDLLNT*
Ga0137381_106871872	3300012207	Vadose Zone Soil	MAKRVFLATRDLLFRAKLGGAVTAAGGDVSREEEACDLVVLDLADPAAVRRIEDLVQRGLAVLAYGSHIQPDLLRAARAAGATAVPNSEVERRLRELVRT*
Ga0137376_100336915	3300012208	Vadose Zone Soil	MAKRVLLATRDLLFRSKLGAVVATAGGDVSRDEAASDLAVVDLGEAGAMERIGELVRRGIPVLAYGSHVRVDLLHAARGAGATAVPNSQVEERLRDLLNA*
Ga0137376_109405692	3300012208	Vadose Zone Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQ
Ga0137379_106466662	3300012209	Vadose Zone Soil	MAKRVLLVTRDVLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIGELVRRDIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRELLIG*
Ga0137378_100472064	3300012210	Vadose Zone Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLNR*
Ga0137377_116652912	3300012211	Vadose Zone Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLL
Ga0137370_100143236	3300012285	Vadose Zone Soil	LSKRVLLATRDLLLRSKLGAVVAAAGAAVSRDEAACDLAVLELGGSDATERIDELVRRGIPVLAYGSHVHAELLRAARQAGATAVPNSQVEERLRELLNQ*
Ga0137367_102055312	3300012353	Vadose Zone Soil	LLATRDLLFRSKLGGVVAAAGADVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRDLLNT*
Ga0137369_111265602	3300012355	Vadose Zone Soil	MAKRVLLATRDLVFRSKLGAVVATAGGDVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRDLLNT*
Ga0137371_103597511	3300012356	Vadose Zone Soil	ASWRSRRSMAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRELLIG*
Ga0137385_105119541	3300012359	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEERLRELLIG*
Ga0137390_107628582	3300012363	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELAGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0134060_11514782	3300012410	Grasslands Soil	RDLVFRSKLARVVDAAGAEVTRDEAACELAVLEIESAGSTARIKTLVARGTSVLAYGSHVRPDLLRSAREAGATAVPNSQVEERLRELLGAADPGPAARG*
Ga0137373_104798662	3300012532	Vadose Zone Soil	LLATRDLLFRSKLGGVVAAAGADVSRDEAACDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVP
Ga0137395_105460381	3300012917	Vadose Zone Soil	MPKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEGACDLAVLELGGLGATDRIAELVRRGIPVLAYGSHVQVDLLRAARDAGATAVPNSQVEAQLRDLLTK*
Ga0137404_114404432	3300012929	Vadose Zone Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGQVSRDEAACDLAVLELGGPEATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRELLAI*
Ga0134077_101560561	3300012972	Grasslands Soil	TRDLLFRSKLGGVVAAAGAEVSRDETACDLAVLELSGPGATERIGELVRRGIPVLAYGSHVEVELLRTAREAGATAVPNSQVEERLRDLLNT*
Ga0137403_100719972	3300015264	Vadose Zone Soil	MFRGKLGAVCAAAGAAVVRDETACDLAVLELDAPGAADRLRGLVGRGVPVLAFGLHVHAEQLRAARDAGADAVPNSQVEARLRVLLDA*
Ga0134073_100345332	3300015356	Grasslands Soil	ARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG*
Ga0134089_101302082	3300015358	Grasslands Soil	MAKRVLLATRDLLFRSKLGGVVAAAGAEVSRDETACDLAVLELSGPGATERIGELVRRGIPVLAYGSHVEVELLRTAREAGATAVPNSQVEERLRELLTQ*
Ga0134089_103384232	3300015358	Grasslands Soil	MLRPYGLPLMPMAKRVLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLREL
Ga0134112_100000441	3300017656	Grasslands Soil	RDLVFRSKLARVVDAAGAEVTRDEAACELAVLEIESAGSTARIKTLVARGTSVLAYGSHVRPDLLRSAREAGATAVPNSQVEERLRELLGAADPGPAARG
Ga0134083_102984292	3300017659	Grasslands Soil	LLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATETIGELVGRGIPVLAYGAHVRPELLRSARDAGAMAVPNSQVEARLRDLLKQ
Ga0066655_100881282	3300018431	Grasslands Soil	MPRQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG
Ga0066655_102104422	3300018431	Grasslands Soil	MLRPDGVPLMAMAKRVLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0066667_100629421	3300018433	Grasslands Soil	MLRPYGVPLMPMAKRVLLETRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0066667_106504452	3300018433	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLSR
Ga0066662_100392083	3300018468	Grasslands Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATEKIGELVGRGIPVLAYGAHVRPELLRSARDAGALAVPNSQVEARLRDLLKQ
Ga0066669_112209221	3300018482	Grasslands Soil	MPKRVLLATRDLLFRSKLGGVVAAAGADVSRDEAACDLAVLELGGPDATERIDELVRRGIPVLAYGSHVHAELLRVARQAGATAVPNSQVEERLRELLNQ
Ga0215015_107278073	3300021046	Soil	VPKRVCLLTADLLFRSKLGAVVAGAGGEVTRDDARCDLAVVDLADGTRAGQVGELVGRGIPVLAYGSHVRPELLRAARDAGARAVPNSEVAAALSDLLR
Ga0215015_107920451	3300021046	Soil	VSGPGAAPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAALDVFVLPSEDKELIYDL
Ga0179596_100299952	3300021086	Vadose Zone Soil	MFRGKLGAVCAAAGAEVVRDETACDLAVLELDAPGAADRLRGLVGRGVPVLAFGSHLHAEQLRAARDAGADAVPNSQVEARLRVLLDA
Ga0242665_101822381	3300022724	Soil	MLCRYGVSVMPMAKRVLLATRDLLFRSKLGAVVAAAGAEVSRDEAACDLAVLELAGTGAAERIAELVRRGTPVLAYGSHVQVELLRAAREA
Ga0207653_100042738	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRDLLNA
Ga0207684_100391307	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLATRDLLFRSKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLRAARQAGATAVPNSQVEERLRELLKA
Ga0207684_104257721	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SKLGGVVAAAGAAVSRDEAACDVAVLELGGPGAVERIGELVRRGIPVLAYGSHVQVELLHAARQAGATAVPNSQVEERLRELLNA
Ga0207646_100015725	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRVLLVTRDLLFRSKLGGVAAAAGAEVSRDEAACDLAVLELGGPRATDRIAELVRRGIPVLAYGSHVQVEQLRAARDAGATAVPNSQVEAQLRDLLTK
Ga0207665_100114206	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVFLIAPDLLFRSKLGVVIAESGAEVSRDETASDLVVIELGDARAIDRIGQLVERGVPVLAYGAHVRPELLRAARDAGAVAVP
Ga0209350_10116566	3300026277	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPAATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLAI
Ga0209236_12406692	3300026298	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGQVSRDEAACDLAVLELGGPEATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQVEARLRDLLNR
Ga0209238_10680013	3300026301	Grasslands Soil	LSKRVLLATRDLLFRSKLGAVVAAAGAAVSRDEAACDLAVLELGGSDATERIDELVRRGIPVLAYGSHVHAELLRAARQAGATAVPNSQVEERLRELLNQGAGNT
Ga0209761_12843921	3300026313	Grasslands Soil	LAKRVLLATRDLLFRSKLGAVVAAGGGQVSRDEAACDLAVLELGGPEATERIDELVRRGIPVLAYGSHVHAELLHAARQAGATAEPN
Ga0209268_10092568	3300026314	Soil	RCASPPIGSRHTSRSGLAKRVLLATRDLLFRSKLGAVVAAGGGEVSRDEAACDLAVLELGGPGATERIDQLVRRGIPVLAYGSHVHAELLHAARQAGATAVPNSQIEARLRDLLSR
Ga0209470_12830122	3300026324	Soil	MLRPYGVPLMPMAKRVLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0209801_1000002323	3300026326	Soil	MGKRVLLATGDLLFRSKLSAVVTAAGGEVSRDAARCDLAVLELAEPGATETIGELVGRGIPVLAYGAHVRPELLRSARDAGAMAVPNSQVEARLRDLLKQ
Ga0209803_10000731	3300026332	Soil	TRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLGTADGGLPG
Ga0209059_13399822	3300026527	Soil	MPRQVFLGTRDLLFRSKLARVVAATGAELTRDEVACDLAVLEIEPAGSMDRIAALVARGTPVLAYGSHVQADLLRAARDAGAAAVPNSQVEERLRELLG
Ga0209378_10567563	3300026528	Soil	MPRQVFLATRDLVFRSKLARVVDAAGAEVTRDEAACELAVLEIESAGSTARIKTLVARGTSVLAYGSHVRPDLLRSAREAGATAVPNSQVEERLRELLGAADPGPAARG
Ga0209058_10875722	3300026536	Soil	MLRPDGVPLMAMAKRVLLATRDLLFRSKLGAVVAAAGGHVSRDEAACDLAVLELGGPEAVERIGELARRGIPVLAYGSHVQAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0209058_12346642	3300026536	Soil	MLRPYGLRLMPMAKRVLLGTPDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0209157_11271543	3300026537	Soil	MAKRVLLATRDLLFRSKLGGVVAAAGAEVSRDETACDLAVLELSGPGATERIGELVRRGIPVLAYGSHVEVELLRTAREAGATAVPNSQVEERLRDLLNT
Ga0209376_10564162	3300026540	Soil	MAKRVLLGTRDLLFRSKLGAVVAAAGADVSRDEAACDLAVIELGGPGATERIGELARRGIPVLAYGSHVHAELLRAARQAGAAAVPNSQVEERLRELLTQ
Ga0209648_100384993	3300026551	Grasslands Soil	MSGPGAAPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVPNSEVAAALGDLLR
Ga0209648_100434956	3300026551	Grasslands Soil	VSGPGAVPKRVCLLTADLLFRSKLGAVVAGAGGEVTRDDARCDLAVVDLADGTRAGRVGELVGRGIPVLAYGSHVRPELLRAARDAGARAVPNSEVAAALSDLLR
Ga0209178_11827232	3300027725	Agricultural Soil	VAKRVLLVTADLMFRSKLGSVVAAAGGEVTRDESACDLAVLELGEGPFVERLGDLVQRGIPVLAYGSHVRPEVLRAARETGATAVPNSQVAERLRKLLETK
Ga0209180_100153443	3300027846	Vadose Zone Soil	VSGPGAVPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADSARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVPNSEVAAALGDLLR
Ga0209701_100226862	3300027862	Vadose Zone Soil	VSGPGAVPKRICLLTADLLFRSKLGAVVAAAGGEVTRDDAGCDLAVIDLADGARAGRVGEFVGRGIPVLAYGSHVRPEVLRAARDAGARAVPNSEVAAALGDLLR
Ga0209701_101113733	3300027862	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDVLTK
Ga0209283_105611372	3300027875	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAACDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK
Ga0209488_100187462	3300027903	Vadose Zone Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAELSREEAACDLAVLELAGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK
Ga0307469_100021984	3300031720	Hardwood Forest Soil	MPKRVFLATRDLLFQSKLGAVVTAAGAEVSRDEAACDLAVLELADPGALERIAELVGRGIPVLAYGAHVRPELLRSARDAGALAVPNSQVLEQLSAILGAPT
Ga0307469_101799974	3300031720	Hardwood Forest Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAEVSRDEAGCDLAVLELGGPGTTDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLAK
Ga0307473_111259952	3300031820	Hardwood Forest Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAELSRDEAGCDLAVLELGGPGATDRIGELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEAQLRDLLTK
Ga0307479_107547402	3300031962	Hardwood Forest Soil	VSPPAAAPKRVCLLTADLLFRSKLGAVVAAAGGEVTRDEAACELAVVDLADGARAGRIGDFVGRGIPVLAYGSHVRPELLRAARDAGARAVPNSQ
Ga0307471_1000514296	3300032180	Hardwood Forest Soil	MPKRVFLATRDLLFRSKLGAVVTAAGAEVSRDEAACDLAVLELADPGALERIAELVGRGIPVLAYGAHVRPELLRSARDAGALAVPNSQVLEQLSAILGAPT
Ga0307472_1014036932	3300032205	Hardwood Forest Soil	MAKRVLLVTRDLLFRSKLGGVVAAAGAELSRDEAGCDLAVLELGGPGATDRIAELVRRGIPVLAYGSHVQVELLRAARDAGATAVPNSQVEARLRDLLTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055128

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences