Metagenome / Metatranscriptome Family F055100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	44 residues
Representative Sequence	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Number of Associated Samples	116
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.39 %
% of genes near scaffold ends (potentially truncated)	69.06 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.813 % of family members)
Environment Ontology (ENVO)	Unclassified (33.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.007 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 0.00% Coil/Unstructured: 83.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00133	tRNA-synt_1	21.58
PF13191	AAA_16	18.71
PF00296	Bac_luciferase	6.47
PF08264	Anticodon_1	2.88
PF13424	TPR_12	2.16
PF13193	AMP-binding_C	0.72
PF13006	Nterm_IS4	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	21.58
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	21.58
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	21.58
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	21.58
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	6.47

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.17 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.17 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	60.43 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	22.30 %
Unclassified	root	N/A	13.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.32 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.30 %
Unclassified	root	N/A	13.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.32 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.30 %
Unclassified	root	N/A	13.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.32 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	3.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.30 %
Unclassified	root	N/A	13.67 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	3.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Streptomyces alboflavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	1.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_12699874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300000956\|JGI10216J12902_100099498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300001356\|JGI12269J14319_10073229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1872	Open in IMG/M
3300002245\|JGIcombinedJ26739_100097591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2749	Open in IMG/M
3300004063\|Ga0055483_10033058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300004091\|Ga0062387_101348040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300005172\|Ga0066683_10342010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300005332\|Ga0066388_100513889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1832	Open in IMG/M
3300005363\|Ga0008090_10012353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300005363\|Ga0008090_15818763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005434\|Ga0070709_11455190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	555	Open in IMG/M
3300005467\|Ga0070706_100038892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4390	Open in IMG/M
3300005467\|Ga0070706_100178989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1979	Open in IMG/M
3300005764\|Ga0066903_100053134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4963	Open in IMG/M
3300005764\|Ga0066903_101153403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1434	Open in IMG/M
3300005764\|Ga0066903_102482933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1003	Open in IMG/M
3300005764\|Ga0066903_103599053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300005764\|Ga0066903_105329643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300005899\|Ga0075271_10049416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300005900\|Ga0075272_1042945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300006028\|Ga0070717_10049178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3460	Open in IMG/M
3300006034\|Ga0066656_10597774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300006049\|Ga0075417_10016952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2843	Open in IMG/M
3300006052\|Ga0075029_100611796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	729	Open in IMG/M
3300006057\|Ga0075026_100749206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300006162\|Ga0075030_101401373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300006174\|Ga0075014_100176198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300006579\|Ga0074054_12146376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300006755\|Ga0079222_11716845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300006796\|Ga0066665_10491837	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300006854\|Ga0075425_102649593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	553	Open in IMG/M
3300006854\|Ga0075425_102675231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300006903\|Ga0075426_10156213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1646	Open in IMG/M
3300009038\|Ga0099829_11440900	Not Available	569	Open in IMG/M
3300009089\|Ga0099828_11907198	Not Available	521	Open in IMG/M
3300009698\|Ga0116216_10996397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300009700\|Ga0116217_10077175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2322	Open in IMG/M
3300010043\|Ga0126380_11952150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010048\|Ga0126373_10666248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1097	Open in IMG/M
3300010326\|Ga0134065_10410729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300010333\|Ga0134080_10483910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300010358\|Ga0126370_10461730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300010358\|Ga0126370_11871315	Not Available	583	Open in IMG/M
3300010360\|Ga0126372_11555330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300010361\|Ga0126378_10391029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1502	Open in IMG/M
3300010361\|Ga0126378_11504030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300010366\|Ga0126379_13777496	Not Available	507	Open in IMG/M
3300010376\|Ga0126381_101284108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300010376\|Ga0126381_101314712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1045	Open in IMG/M
3300010376\|Ga0126381_103406169	Not Available	626	Open in IMG/M
3300010876\|Ga0126361_11175359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300011270\|Ga0137391_10027983	All Organisms → cellular organisms → Bacteria	4709	Open in IMG/M
3300011270\|Ga0137391_10219663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1651	Open in IMG/M
3300011270\|Ga0137391_11569553	Not Available	502	Open in IMG/M
3300011271\|Ga0137393_10320630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1321	Open in IMG/M
3300012198\|Ga0137364_10271352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1256	Open in IMG/M
3300012208\|Ga0137376_10931030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300012361\|Ga0137360_11435509	Not Available	594	Open in IMG/M
3300012507\|Ga0157342_1070376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012944\|Ga0137410_10853466	Not Available	768	Open in IMG/M
3300012955\|Ga0164298_10482250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300012961\|Ga0164302_11026498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	645	Open in IMG/M
3300013100\|Ga0157373_10856990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300015372\|Ga0132256_101002996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300016445\|Ga0182038_10406533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300017939\|Ga0187775_10048860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1283	Open in IMG/M
3300017943\|Ga0187819_10463663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300018032\|Ga0187788_10193918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300018032\|Ga0187788_10263548	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018058\|Ga0187766_10412005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300018060\|Ga0187765_10010108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4225	Open in IMG/M
3300021404\|Ga0210389_11108859	Not Available	611	Open in IMG/M
3300021477\|Ga0210398_10271608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300021559\|Ga0210409_10384964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300021560\|Ga0126371_10605716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300021560\|Ga0126371_10811500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300025928\|Ga0207700_11878713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300025931\|Ga0207644_10326437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300026300\|Ga0209027_1278531	Not Available	538	Open in IMG/M
3300026551\|Ga0209648_10155774	Not Available	1798	Open in IMG/M
3300027310\|Ga0207983_1022028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	775	Open in IMG/M
3300027725\|Ga0209178_1031467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1670	Open in IMG/M
3300027905\|Ga0209415_10115797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2855	Open in IMG/M
3300027911\|Ga0209698_10106111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2347	Open in IMG/M
3300028015\|Ga0265353_1031182	Not Available	534	Open in IMG/M
3300028807\|Ga0307305_10298772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300028906\|Ga0308309_11006067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300030706\|Ga0310039_10175501	Not Available	855	Open in IMG/M
3300031469\|Ga0170819_17413153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300031543\|Ga0318516_10033167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2736	Open in IMG/M
3300031543\|Ga0318516_10080234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1821	Open in IMG/M
3300031544\|Ga0318534_10146408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1362	Open in IMG/M
3300031544\|Ga0318534_10285814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300031549\|Ga0318571_10289811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300031564\|Ga0318573_10659963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300031572\|Ga0318515_10074346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1751	Open in IMG/M
3300031572\|Ga0318515_10639206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031573\|Ga0310915_10565142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	807	Open in IMG/M
3300031573\|Ga0310915_11144856	Not Available	539	Open in IMG/M
3300031668\|Ga0318542_10280800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300031679\|Ga0318561_10449849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300031682\|Ga0318560_10086548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1604	Open in IMG/M
3300031736\|Ga0318501_10848033	Not Available	507	Open in IMG/M
3300031747\|Ga0318502_10325964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	906	Open in IMG/M
3300031747\|Ga0318502_10643804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300031751\|Ga0318494_10294331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	935	Open in IMG/M
3300031764\|Ga0318535_10275313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031770\|Ga0318521_10349847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300031771\|Ga0318546_10602896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300031779\|Ga0318566_10206886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300031781\|Ga0318547_10179182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1258	Open in IMG/M
3300031792\|Ga0318529_10376038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300031794\|Ga0318503_10206757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300031797\|Ga0318550_10382670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300031798\|Ga0318523_10070616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1677	Open in IMG/M
3300031819\|Ga0318568_10516396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300031821\|Ga0318567_10820562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300031831\|Ga0318564_10150277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1038	Open in IMG/M
3300031835\|Ga0318517_10219481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300031879\|Ga0306919_10205699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1465	Open in IMG/M
3300031897\|Ga0318520_10556830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300031959\|Ga0318530_10084194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300031959\|Ga0318530_10146513	Not Available	958	Open in IMG/M
3300031959\|Ga0318530_10499325	Not Available	506	Open in IMG/M
3300032008\|Ga0318562_10366854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300032010\|Ga0318569_10572884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300032041\|Ga0318549_10275697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300032043\|Ga0318556_10207006	Not Available	1021	Open in IMG/M
3300032044\|Ga0318558_10018365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	2787	Open in IMG/M
3300032054\|Ga0318570_10512623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300032059\|Ga0318533_10759304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300032063\|Ga0318504_10402446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300032067\|Ga0318524_10070150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1701	Open in IMG/M
3300032094\|Ga0318540_10166609	Not Available	1058	Open in IMG/M
3300032770\|Ga0335085_10456077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300032805\|Ga0335078_11553359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300032954\|Ga0335083_10994689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces alboflavus	660	Open in IMG/M
3300032955\|Ga0335076_10017068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7277	Open in IMG/M
3300032955\|Ga0335076_10499942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.24%
Host-Associated	Host-Associated	5.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.49%
Aquatic	Environmental → Aquatic	5.76%
Plants	Host-Associated → Plants	5.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Sediment	Environmental → Aquatic → Sediment	3.60%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Marine	Environmental → Aquatic → Marine	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.78%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.32%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.44%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005899	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_126998741	3300000550	Soil	VPRAARRGAVRLGAMSSDFRPSRALQTRQARLVPDKPSLDGIEEKWSRRWEESGVVHV*
JGI10216J12902_1000994981	3300000956	Soil	MSTDSQAPQAHKASLVPDKPTLDGIEDKWSRRWENSGVVQV*
JGI12269J14319_100732292	3300001356	Peatlands Soil	MSTNSRPAAEQQRRASLVPVKPSLDGIEEKWSRRWEEQGVVQV*
JGIcombinedJ26739_1000975911	3300002245	Forest Soil	VPNPHRVRGPGWATLAAMSTDSRPAAAARARVSQASPMPLKPSLEGIEEKWSRRWEESGVVQV*
Ga0055483_100330582	3300004063	Natural And Restored Wetlands	MSTDSRRAAGQQRRASLVPVKPSLDGIEDKWSRRWEEQGVVQV*
Ga0062387_1013480401	3300004091	Bog Forest Soil	AACATLTAMSTDSRPAAAPASPARAQASPMPLKPSLEGIEDTWSRRWEESGVVQV*
Ga0066683_103420102	3300005172	Soil	VPRAARRGAVRLGAMSSDSRPSRAQQMRQASLVPDKPSLDGIEEKWSRRWEESGVVHV*
Ga0066388_1005138892	3300005332	Tropical Forest Soil	VAGEPPGRTPPCGTLAPMSTDSRPSRARPARQAGPGPGKPSLDGIEEKWSRRWEEAGVVQV*
Ga0008090_100123531	3300005363	Tropical Rainforest Soil	MSTDSRPSRAQDTRQASLMPAKPTLEGLEEKWSRRWEESG
Ga0008090_158187631	3300005363	Tropical Rainforest Soil	LPAAAVYPGHMNTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV*
Ga0070709_114551901	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AAMSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVVHV*
Ga0070706_1000388923	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RAVRYPVRMSTDSHAQDAQQASLVPGKPSLDGIEDRWSRRWEISGVVQV*
Ga0070706_1001789895	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLHERSIGDPDSRPGDVPAKPALDGIEEKWSRRWEEARVVQV*
Ga0066903_1000531342	3300005764	Tropical Forest Soil	MSTDSRLSGAPDARQASLVPGKPSLDGIEDKWSRRWEESGVVQV*
Ga0066903_1011534031	3300005764	Tropical Forest Soil	MRYPGPMSTDSRPSRAQDARQASPVPGKPSLDGIEEKW
Ga0066903_1024829333	3300005764	Tropical Forest Soil	VRYATAMSTDSRPSRAQDARQASLVPAKPTLAGLEEKWSRRWEESGVVHV*
Ga0066903_1035990533	3300005764	Tropical Forest Soil	LLAAAVYPGHMNTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVV
Ga0066903_1053296431	3300005764	Tropical Forest Soil	MSTDSRLSGAPDARQASLVPGKPSLDGIEDTWSRRWEESGVVQV*
Ga0075271_100494162	3300005899	Rice Paddy Soil	MSTEPRLSRAPQARETSLVTGKPSLDGLEEKWSRRWEESAVVQV*
Ga0075272_10429452	3300005900	Rice Paddy Soil	MSTESRLSRAPQARETSLVTGKPSLDGLEEKWSRRWEESAVVQV*
Ga0070717_100491782	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVFAPHSGCATLAAMSTDSRPAAAPASPARASQASPVPLKPSLEGIEEKWSRRWEEAGVVQV*
Ga0066656_105977741	3300006034	Soil	MSTDSRLMGTQDARRASLVPGKPSLDGIEDKWSRRWEESGVVQV*
Ga0075417_100169523	3300006049	Populus Rhizosphere	VPRAARRSAVRLGAMSSDSRPSRAQQMRQARLVPDKPSLDGIEEKWSRRWEESGVVHV*
Ga0075029_1006117962	3300006052	Watersheds	VRYATHMSTDSGPSRARDARQASLVPAKPTLEGLEEKWSRRWEESGVVQV*
Ga0075026_1007492061	3300006057	Watersheds	MSTDSRSRRAQDALQASLLPGKPTLDGLEEKWSRRWEESGVVHV*
Ga0075030_1014013732	3300006162	Watersheds	ATHMSTDSGPSRARDARQASLVPAKPTLEGLEEKWSRRWEESGVVQV*
Ga0075014_1001761982	3300006174	Watersheds	RVRYATGMSTDSGSSRAQDARQASLVPAKPTLDGLEEKWSRRWEESGVVQV*
Ga0074054_121463761	3300006579	Soil	RTPPSGILAAMSTDSRPGRARRARQASPVPGKPSLDGIEEKWSRRWEEAGVVHV*
Ga0079222_117168451	3300006755	Agricultural Soil	MSTDSRPSRAQDAHQASPVPGKPSLDGIEAKWSRR
Ga0066665_104918372	3300006796	Soil	TGSHAPGAQKASLVPDKPSLDGIEDRWSRQWETSSVVQV*
Ga0075425_1026495931	3300006854	Populus Rhizosphere	AMSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVVHV*
Ga0075425_1026752312	3300006854	Populus Rhizosphere	VPRAARRSAVRLGAMSSDSRPSRAQQMRQASLVPDKPSLDGIEEKWSRRWEESGVVHV*
Ga0075426_101562131	3300006903	Populus Rhizosphere	APPSRTPPSGILAAMSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVVHV*
Ga0099829_114409003	3300009038	Vadose Zone Soil	MSTDSHDAPKALQASLVPDKPTLDGIEDKWSRRWENSGVVQV*
Ga0099828_119071981	3300009089	Vadose Zone Soil	LRAMSTDSCPSGAPRARRASLVPGKPSLDGIEEKWSRRWEDGLVVQV*
Ga0116216_109963971	3300009698	Peatlands Soil	MSTNSRPAAEQQRRASLVPVKPSLDGIEDKWSRRWEEQGVVQV*
Ga0116217_100771752	3300009700	Peatlands Soil	MSTNSRRAAEQQRRASLVPVKPSLDGIEEKWSRRWEEQGVVQV*
Ga0126380_119521501	3300010043	Tropical Forest Soil	MSTDSRPSRAQRARQASLVPDRPSLDGIEEKWSRRWEE
Ga0126373_106662482	3300010048	Tropical Forest Soil	CTLGTMSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV*
Ga0134065_104107292	3300010326	Grasslands Soil	MSTDSRPSRAQDAGQAGPVPGKPSLDGIEDKWSRRWEEG
Ga0134080_104839102	3300010333	Grasslands Soil	MSSDSRPSRAQQMRQASLVPDKPSLDGIEEKWSRRWEEAGVVQV*
Ga0126370_104617301	3300010358	Tropical Forest Soil	MSTDSRPSRAQDARQASPVPGKPSLDGIEEKWSRRWEE
Ga0126370_118713151	3300010358	Tropical Forest Soil	MSTESHALDARKASLVPDKPSLDGIEDRWSRRWEDSGVVQ
Ga0126372_115553302	3300010360	Tropical Forest Soil	MSTDSPALDARQASLVPDKPSLDGIEDKWSREWETSGVVQV*
Ga0126378_103910292	3300010361	Tropical Forest Soil	MNTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV*
Ga0126378_115040301	3300010361	Tropical Forest Soil	MSTDSRPSRAQDARPTSPVPGKPSLDGIEEKWSRRWDE
Ga0126379_137774961	3300010366	Tropical Forest Soil	MSTDSRLSGAQDARQASLVPGKPSLDGIEDKWSRRWEESGVVQV*
Ga0126381_1012841083	3300010376	Tropical Forest Soil	VVLARGCITLGSMSTESRPSASLVPGKPSLDGIEDKWSRRWEASGVV
Ga0126381_1013147121	3300010376	Tropical Forest Soil	MSTDSASSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV*
Ga0126381_1034061691	3300010376	Tropical Forest Soil	MSTDSHAHDARKASLVPDKPSLDGIEDRWSRQWETSGVVQV
Ga0126361_111753591	3300010876	Boreal Forest Soil	MSTDSRPSAADTRHASLVPGKPSLDGIEEKWSRRWEEAGVVQV
Ga0137391_100279835	3300011270	Vadose Zone Soil	SACATLAGMSTDSRPSAADTRQASLVPGKPSLDGIEEKWSRRWEEAAVVQV*
Ga0137391_102196633	3300011270	Vadose Zone Soil	MSTDSHDAPKALQASLVPDKPTLDGIEEKWSRQWDDSGVVQV*
Ga0137391_115695532	3300011270	Vadose Zone Soil	TLRAMSTDSCPSGAPRARRASLVPGKPSLDGIEEKWSRRWEDGLVVQV*
Ga0137393_103206303	3300011271	Vadose Zone Soil	MSTDSHDAPKARQASLVPDKPTLDGIEDKWSRRWENSGVVQV*
Ga0137364_102713521	3300012198	Vadose Zone Soil	MSTDSRPSRAQDARQASPVLGKPSLDGIEEKWSRRWEQAGVVHV
Ga0137376_109310303	3300012208	Vadose Zone Soil	MSTDSRPSRAPDARQASPVPGKPSLDGIEEKWSRRWEEA
Ga0137360_114355091	3300012361	Vadose Zone Soil	GLACAAGLVGVRYAGGMSTDSRPSAADTRQASLVPGKPSLDGIEEKWSRRWEEAGVVQV*
Ga0157342_10703762	3300012507	Arabidopsis Rhizosphere	MSTDSRPRRAQDARQASPVPGKPSLDGIEEKWSRRWDEAG
Ga0137410_108534661	3300012944	Vadose Zone Soil	LTAMSTDSRPAAAPASPARAQASPMPLKPSLEGIEDKWSRRWEETGVVQV*
Ga0164298_104822503	3300012955	Soil	MSTDSRPGRARRARQASPVPGKPSLDGIEEKWSRRWEE
Ga0164302_110264982	3300012961	Soil	MSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRQWDEAGVVHV*
Ga0157373_108569901	3300013100	Corn Rhizosphere	MSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAG
Ga0132256_1010029961	3300015372	Arabidopsis Rhizosphere	MSTDSRPSRARRARQASPVPGKPSLDGIEEKWSRRWEE
Ga0182038_104065333	3300016445	Soil	MSTDSHALGARQASLVPDKPSLDGIEDRWSRRWEDS
Ga0187775_100488603	3300017939	Tropical Peatland	MSTDSRPSRAQDARQARPVPGKPSLDGIEVKWSRRWEEGGVVQV
Ga0187819_104636632	3300017943	Freshwater Sediment	MSADSRSSRAQDARQASLVPGKPTLDGLEDKWSRRWEESGVVQV
Ga0187788_101939181	3300018032	Tropical Peatland	MRYPCPMTTDSRPSRAQDARQASPVPGKPSLDGIEEKWSRRWEEAGVVQV
Ga0187788_102635482	3300018032	Tropical Peatland	CPMTTDSRPSRAQDARQASPVPGKPSLEGIEEKWSRRWEEAGVVQV
Ga0187766_104120052	3300018058	Tropical Peatland	MSTDPGSSRAQDARQASLVPAKPTLDGLEEKWSRRWEESGVVHV
Ga0187765_100101082	3300018060	Tropical Peatland	MSPPRALLYSGTMSTDSRPSGAQQARQASLVPGKPSLDGIEDKWSRRWEESGVVHV
Ga0210389_111088591	3300021404	Soil	RGCVTLAAMSTDSRPAAAPAFPARAQASPMPLKPSLEGIEDTWSRRWEESGVVQV
Ga0210398_102716081	3300021477	Soil	MSTDSHARGAQQASLVPDKPSLDGIEDKWSRRWENS
Ga0210409_103849641	3300021559	Soil	MSTDSRALGAQQASLVPDKPSLDGIEDRWSRQWET
Ga0126371_106057163	3300021560	Tropical Forest Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVV
Ga0126371_108115002	3300021560	Tropical Forest Soil	MSTDSRLSGAQDARQASLVPGKPSLDGIEDKWSRRWEESGVVQV
Ga0207700_118787132	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSTESHAPGARQASLVPDKPTLDGIEDKWSRRWENSGVVQV
Ga0207644_103264371	3300025931	Switchgrass Rhizosphere	MSTDSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVVHV
Ga0209027_12785311	3300026300	Grasslands Soil	GAVRLGAMSSDSRPSRAQQMRQASLVPDKPSLDGIEEKWSRRWEESGVVHV
Ga0209648_101557743	3300026551	Grasslands Soil	MSTDSHDAPKARQASLVPDKPTLDGIEDKWSRRWENSGVVQV
Ga0207983_10220281	3300027310	Soil	PSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVVQV
Ga0209178_10314671	3300027725	Agricultural Soil	MSTDSHAPQARQASLVPDKPTLDGIEDKWSRRWENS
Ga0209415_101157972	3300027905	Peatlands Soil	MSTNSRPAAEQQRRASLVPVKPSLDGIEEKWSRRWEEQGVVQV
Ga0209698_101061112	3300027911	Watersheds	QPVRYATHMSTDSGPSRARDARQASLVPAKPTLEGLEEKWSRRWEESGVVQV
Ga0265353_10311821	3300028015	Soil	AILGGMSTDSHARDAQQASLVPDKPSLDGIEDKWSRRWENSGVVQV
Ga0307305_102987722	3300028807	Soil	MSTDSRPSRAQNARQASPVPGKPSLDGIEDKWSRQWDEAGVVHV
Ga0308309_110060671	3300028906	Soil	MSTDSRPAAALARARVSQASPMPLKPSLEGIEEKWSRRWEESGVVQ
Ga0310039_101755011	3300030706	Peatlands Soil	NSRPAAEQQRRASLVPVKPSLDGIEEKWSRRWEEQGVVQV
Ga0170819_174131532	3300031469	Forest Soil	MSTESHAPEARQASLVPDKPSLDGIEEKWSRRWEEAGVVHV
Ga0318516_100331674	3300031543	Soil	MSTDSHERAALQASLVPDKPTLDGIEDRWSRRWENSGVVQV
Ga0318516_100802342	3300031543	Soil	MSTDSGPSRAQDARQASLVPAKPTLDGLEEKWSRRWEESGVVQV
Ga0318534_101464081	3300031544	Soil	VRYSDGMSTDSHERAALQASLVPDKPTLDGIEDRWSRRWENSGVVQV
Ga0318534_102858143	3300031544	Soil	VRYSDGMSTDSHERAALQASLVPDKPTLDGIEDRWSRRWENS
Ga0318571_102898111	3300031549	Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRW
Ga0318573_106599632	3300031564	Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGV
Ga0318515_100743462	3300031572	Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Ga0318515_106392061	3300031572	Soil	MSTESHAPGARQASLVPDEPSLDGIEDKWSRRWEDSGV
Ga0310915_105651421	3300031573	Soil	PRPCTLGTMSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Ga0310915_111448561	3300031573	Soil	GMSTDSHERAALQASLVPDKPTLDGIEDRWSRRWENSGVVQV
Ga0318542_102808003	3300031668	Soil	MSTDSHALGARQASLVPDKPSLDGIEDRWSRRWEDSG
Ga0318561_104498492	3300031679	Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWE
Ga0318560_100865481	3300031682	Soil	VYPGHMSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Ga0318501_108480332	3300031736	Soil	MSTESHISASLVPGKPSLDGIEDKWSRRWEASGVVQV
Ga0318502_103259641	3300031747	Soil	MSTDSHALEAQQASLVPDKPSLDGIEDRWSRQWETSGVVQ
Ga0318502_106438041	3300031747	Soil	MSTESHAPGARQASLVPDKPTLDGIEDKWSRRWEN
Ga0318494_102943311	3300031751	Soil	APSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Ga0318535_102753131	3300031764	Soil	MSTESHAPGARQASLVPDKPTLDGIEDKWSRRWENSGVVQ
Ga0318521_103498471	3300031770	Soil	MSTESHAPGARQASLVPDKPTLDGIEDKWSRRWENSGVV
Ga0318546_106028963	3300031771	Soil	MRYPDGMSTDSHAPEGRQASLVPDKPTLDGIEDRWSRRWEN
Ga0318566_102068863	3300031779	Soil	MSTDSHERAALQASLVPDKPTLDGIEDRWSRRWENSGVV
Ga0318547_101791821	3300031781	Soil	SHERAALQASLVPDKPTLDGIEDRWSRRWENSGVVQV
Ga0318529_103760382	3300031792	Soil	VTCVTLGGMSTDSHALAARQASLVPDKPSLDGIEDRWSRRWEASGVVQV
Ga0318503_102067571	3300031794	Soil	MSTDSHALAARQASLVPDKPSLDGIEDRWSRRWEASG
Ga0318550_103826702	3300031797	Soil	MSTDSHALGARQASLVPDKPSLDGIEDRWSRRWEDSGVVQV
Ga0318523_100706161	3300031798	Soil	MSTDSGPSRAQDARQASLVPAKPTLDGLEEKWSRRWEES
Ga0318568_105163961	3300031819	Soil	MSTDSRPSSAQDARPASLVPAKPTLEGLEEKWSRRWEESGVVH
Ga0318567_108205622	3300031821	Soil	MRYPCAMSTESHISASLVPGKPSLDGIEDKWSRRW
Ga0318564_101502772	3300031831	Soil	PSSAQDARPASLVPAKPTLEGLEEKWSRRWEESGVVHV
Ga0318517_102194811	3300031835	Soil	MSTDSGPSRAQDARQASLVPAKPTLDGLEEKWSRR
Ga0306919_102056992	3300031879	Soil	AAAVYPGHMSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESGVVHV
Ga0318520_105568301	3300031897	Soil	MRYPCGMSTESRPSASLVPGKPSLDGIEDKWSRRWEAS
Ga0318530_100841941	3300031959	Soil	MSTDSRPSRAQDERQASPVPAKPTLAGLEEKWSRRWEESGVVHV
Ga0318530_101465131	3300031959	Soil	NEWGPAVTCVTLGGMSTDSHALAARQASLVPDKPSLDGIEDRWSRRWEDSGVVQV
Ga0318530_104993252	3300031959	Soil	YATAMSTDSRPSRAQDERQASPVPAKPTLAGLEEKWSRRWEESGVVQV
Ga0318562_103668543	3300032008	Soil	MSTDSRPDRAHRARQASPVPGKPSLDGIEEKWSRRWEEGRVVHV
Ga0318569_105728842	3300032010	Soil	MSTDSHAPQARQASLVPDKPTLDGIEDRWSRRWEH
Ga0318549_102756973	3300032041	Soil	MSTDSAPSRAPRARQASLVPDKPSLDGIEDKWSRRWEESG
Ga0318556_102070062	3300032043	Soil	GGMSTESRPSASLVPGKPSLDGIEDKWSRRWEASGVVQV
Ga0318558_100183651	3300032044	Soil	TESRLSGAPEARVPGKPSLDGIEDKWSRRWEASGVVQV
Ga0318570_105126232	3300032054	Soil	MSTDSRPSSAQDARPASLVPAKPTLEGLEEKWSRRWEESGVVHV
Ga0318533_107593042	3300032059	Soil	MSTDSHALGARQASLVPDKPSLDGIEDRWSRRWED
Ga0318504_104024461	3300032063	Soil	MSTESHAPGARQASIVPDKPTLDGIEDKWSRRWENSGVVQ
Ga0318524_100701503	3300032067	Soil	MSTDSHALAARQASLVPDKPSLDGIEDRWSRRWEA
Ga0318540_101666091	3300032094	Soil	RPSRAQDERQASPVPAKPTLAGLEEKWSRRWEESGVVHV
Ga0335085_104560773	3300032770	Soil	MRYPGRMATDSRPSRAQDARQASPVPGKPSLDGIE
Ga0335078_115533591	3300032805	Soil	MSTDSRPAAMTQRHTSATMPAKPTLDGIEEKWSRRWEERGVV
Ga0335083_109946891	3300032954	Soil	STDSRPGRARDARQASPVPGKPSLDGIEEKWSRRWEEAGVVHV
Ga0335076_100170686	3300032955	Soil	MSAPRALLYSGIMSTDSRPRGAQQARQASLVPGKSSLDGIEDKWSRRWEESGVVHV
Ga0335076_104999421	3300032955	Soil	MSTGSRPSRAQDARQASPVPGKPSLDGIEDKWSRRWDEAGVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences