Metagenome / Metatranscriptome Family F055089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	72 residues
Representative Sequence	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGILTVCC
Number of Associated Samples	119
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.84 %
% of genes near scaffold ends (potentially truncated)	94.96 %
% of genes from short scaffolds (< 2000 bps)	89.93 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (10.072 % of family members)
Environment Ontology (ENVO)	Unclassified (41.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.129 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.08% β-sheet: 4.17% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00072	Response_reg	89.21
PF00698	Acyl_transf_1	2.88
PF00691	OmpA	1.44
PF00392	GntR	0.72
PF01344	Kelch_1	0.72
PF00583	Acetyltransf_1	0.72
PF01019	G_glu_transpept	0.72
PF13517	FG-GAP_3	0.72
PF02130	YbeY	0.72
PF13690	CheX	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	0.72
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.44 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	51.08 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	51.08 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	51.08 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	22.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.35 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	7.19 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.47 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	5.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.88 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	2.16 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.47 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	5.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.88 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	2.16 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.44 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10007604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9223	Open in IMG/M
3300001593\|JGI12635J15846_10436768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	783	Open in IMG/M
3300003505\|JGIcombinedJ51221_10414143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300004082\|Ga0062384_100915600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	621	Open in IMG/M
3300004091\|Ga0062387_101183505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	597	Open in IMG/M
3300004091\|Ga0062387_101766302	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300004091\|Ga0062387_101774861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300004092\|Ga0062389_101579959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	838	Open in IMG/M
3300004152\|Ga0062386_101215451	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004152\|Ga0062386_101424774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	577	Open in IMG/M
3300004152\|Ga0062386_101777118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	514	Open in IMG/M
3300005467\|Ga0070706_100142933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2234	Open in IMG/M
3300005538\|Ga0070731_10273307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1122	Open in IMG/M
3300005557\|Ga0066704_10790612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	591	Open in IMG/M
3300005712\|Ga0070764_10635736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	653	Open in IMG/M
3300005995\|Ga0066790_10203945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	845	Open in IMG/M
3300006052\|Ga0075029_100203063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1238	Open in IMG/M
3300006059\|Ga0075017_101162290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	604	Open in IMG/M
3300006086\|Ga0075019_10010527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	5179	Open in IMG/M
3300006102\|Ga0075015_100707986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	598	Open in IMG/M
3300006162\|Ga0075030_101582118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	513	Open in IMG/M
3300006174\|Ga0075014_100598899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	630	Open in IMG/M
3300006864\|Ga0066797_1024084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2126	Open in IMG/M
3300007258\|Ga0099793_10481159	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009089\|Ga0099828_10512440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1082	Open in IMG/M
3300009143\|Ga0099792_10224998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1080	Open in IMG/M
3300009521\|Ga0116222_1096901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1270	Open in IMG/M
3300009521\|Ga0116222_1430688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	575	Open in IMG/M
3300009522\|Ga0116218_1279290	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009523\|Ga0116221_1151140	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300009630\|Ga0116114_1058538	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300009630\|Ga0116114_1168912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	552	Open in IMG/M
3300009632\|Ga0116102_1166817	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009641\|Ga0116120_1139116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	786	Open in IMG/M
3300009641\|Ga0116120_1231687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	581	Open in IMG/M
3300009643\|Ga0116110_1063930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1295	Open in IMG/M
3300009762\|Ga0116130_1039621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1510	Open in IMG/M
3300009764\|Ga0116134_1033767	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300009824\|Ga0116219_10585915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	613	Open in IMG/M
3300010341\|Ga0074045_10003727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	13686	Open in IMG/M
3300010341\|Ga0074045_10196289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1353	Open in IMG/M
3300010343\|Ga0074044_10173623	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300010379\|Ga0136449_100609536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1858	Open in IMG/M
3300010379\|Ga0136449_101477952	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300010379\|Ga0136449_104326516	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	525	Open in IMG/M
3300011270\|Ga0137391_10529231	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012096\|Ga0137389_10478014	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012683\|Ga0137398_10124473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1650	Open in IMG/M
3300012923\|Ga0137359_10064969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3184	Open in IMG/M
3300014153\|Ga0181527_1273692	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300014156\|Ga0181518_10103044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1591	Open in IMG/M
3300014158\|Ga0181521_10362442	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300014159\|Ga0181530_10218119	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300014160\|Ga0181517_10283778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	875	Open in IMG/M
3300014162\|Ga0181538_10032422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3437	Open in IMG/M
3300014162\|Ga0181538_10738411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	509	Open in IMG/M
3300014165\|Ga0181523_10169305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1277	Open in IMG/M
3300014168\|Ga0181534_10485954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	696	Open in IMG/M
3300014169\|Ga0181531_10893957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	556	Open in IMG/M
3300014200\|Ga0181526_10243741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1146	Open in IMG/M
3300014200\|Ga0181526_10278447	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300014502\|Ga0182021_11393346	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300016702\|Ga0181511_1430994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	582	Open in IMG/M
3300017823\|Ga0187818_10225853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	818	Open in IMG/M
3300017823\|Ga0187818_10510514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	540	Open in IMG/M
3300017931\|Ga0187877_1217957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	744	Open in IMG/M
3300017933\|Ga0187801_10110177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1050	Open in IMG/M
3300017938\|Ga0187854_10176613	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300017943\|Ga0187819_10424532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	763	Open in IMG/M
3300017948\|Ga0187847_10109113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1522	Open in IMG/M
3300017988\|Ga0181520_10521804	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300017995\|Ga0187816_10321472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300017996\|Ga0187891_1209491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	662	Open in IMG/M
3300017998\|Ga0187870_1328992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	508	Open in IMG/M
3300018007\|Ga0187805_10137586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1110	Open in IMG/M
3300018019\|Ga0187874_10184924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	870	Open in IMG/M
3300018023\|Ga0187889_10128717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1220	Open in IMG/M
3300018025\|Ga0187885_10299456	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300018034\|Ga0187863_10361913	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300018034\|Ga0187863_10851977	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300018044\|Ga0187890_10005699	All Organisms → cellular organisms → Bacteria	8243	Open in IMG/M
3300018047\|Ga0187859_10055650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2092	Open in IMG/M
3300018057\|Ga0187858_10184855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1369	Open in IMG/M
3300018085\|Ga0187772_10533156	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300018086\|Ga0187769_11432423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	522	Open in IMG/M
3300018088\|Ga0187771_11406804	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300019787\|Ga0182031_1247863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300019788\|Ga0182028_1376717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1780	Open in IMG/M
3300020199\|Ga0179592_10314825	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300021404\|Ga0210389_10046308	All Organisms → cellular organisms → Bacteria	3337	Open in IMG/M
3300021405\|Ga0210387_10401107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1215	Open in IMG/M
3300021405\|Ga0210387_10717211	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300021474\|Ga0210390_10304061	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300021475\|Ga0210392_10489175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	905	Open in IMG/M
3300024233\|Ga0224521_1134685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	524	Open in IMG/M
3300025444\|Ga0208189_1075573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	609	Open in IMG/M
3300026271\|Ga0209880_1023331	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300026273\|Ga0209881_1068247	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300026294\|Ga0209839_10198794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	644	Open in IMG/M
3300026557\|Ga0179587_10537314	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300027381\|Ga0208983_1072200	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300027545\|Ga0209008_1124187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	572	Open in IMG/M
3300027674\|Ga0209118_1061601	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300027824\|Ga0209040_10410664	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300027875\|Ga0209283_10332337	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300027898\|Ga0209067_10554683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	656	Open in IMG/M
3300027898\|Ga0209067_10857915	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300027905\|Ga0209415_11010694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	552	Open in IMG/M
3300028652\|Ga0302166_10047256	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300028747\|Ga0302219_10312473	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300028747\|Ga0302219_10365441	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300028798\|Ga0302222_10306173	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300029817\|Ga0247275_1078162	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300029944\|Ga0311352_10579520	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300029995\|Ga0302210_10161596	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031028\|Ga0302180_10057996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2313	Open in IMG/M
3300031232\|Ga0302323_101523642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	753	Open in IMG/M
3300031234\|Ga0302325_11093228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300031236\|Ga0302324_102285260	Not Available	668	Open in IMG/M
3300031238\|Ga0265332_10014287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3511	Open in IMG/M
3300031474\|Ga0170818_107766524	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031715\|Ga0307476_10562100	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031962\|Ga0307479_11441978	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300032174\|Ga0307470_11317682	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032180\|Ga0307471_103315358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	570	Open in IMG/M
3300032205\|Ga0307472_101241532	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300032805\|Ga0335078_10759610	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300032805\|Ga0335078_10891435	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032892\|Ga0335081_11086340	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300033405\|Ga0326727_10144444	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300033405\|Ga0326727_10270136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1722	Open in IMG/M
3300033433\|Ga0326726_11992353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	565	Open in IMG/M
3300033561\|Ga0371490_1139127	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300033808\|Ga0314867_050672	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	972	Open in IMG/M
3300033822\|Ga0334828_073546	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300033826\|Ga0334847_036762	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300034091\|Ga0326724_0320995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	852	Open in IMG/M
3300034125\|Ga0370484_0072731	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300034163\|Ga0370515_0483861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.28%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.83%
Aquatic	Environmental → Aquatic	42.45%
Plants	Host-Associated → Plants	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.88%
Freshwater	Environmental → Aquatic → Freshwater	36.69%
Peat	Environmental → Terrestrial → Peat	12.95%
Sediment	Environmental → Aquatic → Sediment	5.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.76%
Loam	Environmental → Terrestrial → Soil → Loam	5.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.47%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.47%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.60%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.16%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.16%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.16%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.16%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.44%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100076048	3300001593	Forest Soil	MSTDTSFVTRSHEENWLPVLELAVEEVFEIRLGCRVKPVAKVEHPAGAKFTAMIGLAGALCGIITVCCSAKT
JGI12635J15846_104367681	3300001593	Forest Soil	MSAASGLAKRSHEENWLPILELAIQEVFEIMLGCQVKPVAPSEHEANAEFTAMVGLAGALCGILTVCCDAKTARQIATRMLGD
JGIcombinedJ51221_104141431	3300003505	Forest Soil	MSTDSSFATRAQEENWLPILELAIEEVFEIMLGTRVKPAARTEPEAVRGYTAMIGLA
Ga0062384_1009156002	3300004082	Bog Forest Soil	MSTDTSFITRSQGENWLPVLELAVEEVFEIMLGCRVKPATQSEHAPNGEFTAMIGLAGRCAEF*
Ga0062387_1011835052	3300004091	Bog Forest Soil	MSTDTSFRTRAQEENWLPVLELAVEEVFEIMLGCRVKPSAEAEQKPKAEFTAMVGLAGALCGILTVRCDAKTA
Ga0062387_1017663021	3300004091	Bog Forest Soil	MTTDTSFATRSREEDWLPVLELAVEEVFEIMVGCRVKPVPPAEHRPKGEFTAMVGLAGA
Ga0062387_1017748611	3300004091	Bog Forest Soil	MSTDGTVASGSSFAVRSKEENWLPVLELAVEEVFAIMLNCKVKPTAQSENRPNGEFTAMVGLAGALCGILTVCCDRKTAGQLAKSMLGE
Ga0062389_1015799592	3300004092	Bog Forest Soil	MTTDISMVARSREENWLPILELAMEEVFEIMLGCRVKPVSKAEHATVGGCTAMVGLAGALCGIMTFSCDPKTAREVAKAMLGPEIADSQ
Ga0062386_1012154512	3300004152	Bog Forest Soil	MSTDTSLIVRSKEENWLPVLELATEEVFEIMVGTRVKPLPKGEGTPPGGYTAMVGIAGGLCGILTVTCDKKTAGEIAKAMLGPDIADS
Ga0062386_1014247742	3300004152	Bog Forest Soil	MSVDTSALVRSQEENWQPILELAVEEVLEIMMGCRVKPAPKSEYKTSREFTAMIGLA
Ga0062386_1017771181	3300004152	Bog Forest Soil	MSTDTSFITRSREENWHPVLELAVEVVFEIMVGCRVTPMTESEPAPNAEFTAMIGLAGALCGILT
Ga0070706_1001429332	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSAAGRLAERSQEENWLPILELAVEEVFEIMLGCRVKPAAQCEQKPTAEFTAMVGMAGSPCGILTVCCDAKTARQVAKCRLGTQPTPKNR*
Ga0070731_102733071	3300005538	Surface Soil	MNTDISLLTRSREENWLPILELAVEEVFEIMLGCRVRPETKTDGPVSGGCTAMVGLAGSLCGILTFSCDAKT
Ga0066704_107906122	3300005557	Soil	MSTAGGLAKRSHQENWLPILELAIQEVFEIMLGCQVKPMAPSEHKANAEFTAMVGLAGALCGIMTVCCDANTARQIATCMLRDETSSE
Ga0070764_106357362	3300005712	Soil	MSTDSSFATRAQEENWLPILELAIEEVFEIMLGTRVKPAARTEPEAVRGYTAMIGLAGALCGILTVCCDKKTAGQLAQAML
Ga0066790_102039452	3300005995	Soil	MSTDTSFITRSHEENWLPVLELAVEEVFEIMVASRVKPAQVEHKPSGEITAMIG
Ga0075029_1002030631	3300006052	Watersheds	MSTETSLAIHAQEENWLPILELAVEEVFEIMLGRRIKPVPKEGQDPPTEFTAMVGLAGALCGILTLCCDRK
Ga0075017_1011622902	3300006059	Watersheds	MSVDTSAAVRSHEENWQPILELAVEEVLEIMVGCRVKPAPKSECKTSREFTGMIGLAGSLCGVLTVSCSAETARQLAKCMLGDIVS
Ga0075019_100105271	3300006086	Watersheds	MSVDTSAAVRSREENWQPILELAVEEVFEIMVGCRVKPVPKSEHKGRGEFT
Ga0075015_1007079862	3300006102	Watersheds	MSTDAAFSRRVHEENWLPVLELAIEEVFEIMLGCKVMPAKEPGAAVKGEYTAMIGLAGALCGILTICCEAATARQI
Ga0075030_1015821181	3300006162	Watersheds	MSVDTSAAVRSHEEHWQPVLELAVEEVFEIMLGCRVKPTPKSEHQTSGEFTAMV
Ga0075014_1005988992	3300006174	Watersheds	MSTDISLVRRSHEESWLPILELAVEEVFEIMLGCRVKPIHNAEQHGTEGCTAVVGLAGALCGMLTFSCSPK
Ga0066797_10240844	3300006864	Soil	MSTDTSLATRSHEENWLPILELAVEEVFEIMVGCRVKPVAQSEHTPNAEFTAMVGMAGSLCGILTVCC
Ga0099793_104811592	3300007258	Vadose Zone Soil	VSAAGGLAKRSHEENWLPILELAIQEVFDIMLGCQVKPMAPSEHKANAEFTAMVGLAGALCGIMTVCCDANTARRIATCMLGDAVGS
Ga0099828_105124401	3300009089	Vadose Zone Soil	MSIDTTFATRSQQENWLPILELSVEEVFEIMLGCRVKPTAQSEPQVNREFTAMVGLAGALCGIVTVCCDAKTA
Ga0099792_102249983	3300009143	Vadose Zone Soil	MSTAGGLAKRSHQENWLPILELAIQEVFEIMLGCQVKPIVQSEHMPSGEFTAIVGLAGALCGILTVCCDENTA
Ga0116222_10969011	3300009521	Peatlands Soil	MTTDTSLVTRSREENWLPIIELAVEEVFEMMVGCRVKVAAPSENKPNEEFTAMVGLAGALCGILTV
Ga0116222_14306881	3300009521	Peatlands Soil	VTTDTSLVTRSPEENWLPVLELAVEEVFEIMVGCRVKVAAPSEHKPNEEFTAMVGLAGALCGIL
Ga0116218_12792901	3300009522	Peatlands Soil	MTTDTSLVTRSREENWLPIIELAVEEVFEMMVGCRVKVAAPSENKPNEEFTAMVGLAGALCGILAVCCDAKTAGEI
Ga0116221_11511401	3300009523	Peatlands Soil	MSTDTSFATRSHEENWLPVLVLAVEEVFEIMLGCRVKPAGETEHKAHGEFTAMVGLAGALCGVLTVSCYGETARQVAKRM
Ga0116114_10585383	3300009630	Peatland	MTTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAQSENKPNEEFTAMVGLAGALCGILAVCCDAKAAGEIA
Ga0116114_11689121	3300009630	Peatland	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEIAKRMLGDTA
Ga0116102_11668171	3300009632	Peatland	VSTDTSFATRSHEENWLPILVLAVEEVFEIMLGSEVKPAAQSEHRPHGEFTAMVGLAGAL
Ga0116120_11391161	3300009641	Peatland	MNTDASLVTRSHEENWLPILELAVEEVFEIMVGCRVKVAEQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEVAKRMLGDTADSQQQVADAL
Ga0116120_12316872	3300009641	Peatland	MSTDTSFVTRSKEENWLPVLELAVEEVFEIMLGCRVKPVAPAEHTPNGEFTAMIGLAGALCGILTVCCSATT
Ga0116110_10639301	3300009643	Peatland	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEV
Ga0116130_10396213	3300009762	Peatland	MNTDASLVTRSHEENWLPILELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGIL
Ga0116134_10337672	3300009764	Peatland	MSTDTELATRSHEENWLPILVLAVEEVFEIMLGCRVTPVAQSECRPHGEFTALVGLAGALCGVLTVCCDAKTAGLIAKSMLGTQPSPKMKSWTLWERSAT*
Ga0116219_105859151	3300009824	Peatlands Soil	MTTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAQSENKPNEEFTAMVGLAGALCGILAVCC
Ga0074045_100037271	3300010341	Bog Forest Soil	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEIAKRML
Ga0074045_101962891	3300010341	Bog Forest Soil	MSTDTSFITRSREENWHPVLELAVEEVFEIMVGCRVTPMTESEPAPNAEFTAMIGLAGALCGILTVCCDAKTAGQIAKKML
Ga0074044_101736233	3300010343	Bog Forest Soil	MSTDTSFITRSREENWHPVLELAVEEVFEIMVGCRVTPMTESEPAPNAEFTAMIGLAGALCGILTV
Ga0136449_1006095364	3300010379	Peatlands Soil	VSTDISSSTRAHKESWLPILDLAVEEVFEIMLGCRVKPVTPSEHPVHGEFTAMVGLAGSLCGVLTVRC
Ga0136449_1014779521	3300010379	Peatlands Soil	MSTDTSLLVRSHEENWLPVLELAIEEVFEIMVGQRVKPAPKAERPSPGGFTAMVGIAG
Ga0136449_1043265162	3300010379	Peatlands Soil	MSTETSLVMHAQEENWLPILELAVEEVFEIMLGRRVKPVPKEGQQPPTEFTAMVGLAGTLCGILTFCCDQKSARELATCMLGPEIADSE
Ga0137391_105292311	3300011270	Vadose Zone Soil	MSAAGGLAKRSHEENWLPILELAIEEVFEIMLGCQVKPIVQSEHKPSGEFTAMV
Ga0137389_104780141	3300012096	Vadose Zone Soil	MTTDICITRRSHEEGWLPVLELAVEEVFEIMLGCRVKPAAQSEPQVNREFTAMVGLAGA
Ga0137398_101244734	3300012683	Vadose Zone Soil	MSAAGGLAKRSHQENWLPILELAIQEVFEIMLGCQVKPIVQSERMPSGEFTAIVGLAGALCGILTVCCDENTA
Ga0137359_100649695	3300012923	Vadose Zone Soil	MSAAGGLAKRSHQENWLPILELAIQEVFEIMLGCQVKPVEQSEHQANAEFTAMVGLAGALCGIMTVCCDANTARQIATCMLRDET
Ga0181527_12736921	3300014153	Bog	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGI
Ga0181518_101030444	3300014156	Bog	MTTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAQFENKPNEEFTAMVGLAGALCGILAVCCDAKTAGEIAKRMLG
Ga0181521_103624422	3300014158	Bog	MSTDTSFVTRSHEENWLPVLELAVEEVFEIMLGTRVKPVAPSEHMPSGEFTAMIGLAGALCGILTVSCDAKTAGQVAKSMLGDTAKSAE
Ga0181530_102181191	3300014159	Bog	MSTDTVFATRSQEEDWLPILQLAIQEVFEIMLGCQVKAVEQSEHQQQHGGFTAMVGLAGALCGV
Ga0181517_102837782	3300014160	Bog	VSTDTSFATRAQEENWLPVLELAVEEVFEIMLGSRVKPVTQPELKPKGEFTAMVGLAGSLCGILTVCCSAKTAAEMAKRMLG
Ga0181538_100324221	3300014162	Bog	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGAL
Ga0181538_107384111	3300014162	Bog	MSTDTSFVTRSHEENWLPVLELAVEEVFEIMLGTRVKPVAPSEHAPSGEFTAMIGLAGALCGILTVSCDAKTAG
Ga0181523_101693053	3300014165	Bog	MSTDTSFVTRSKEENWLPVLELAVEEVFEIMLGCRVKPVAPAEHTPNGEFTAMIGLAGALCGILTVCCSA
Ga0181534_104859542	3300014168	Bog	MSTDTSFITRSHEENWLPVLELAIEEVFEIMLGCRVKPMARSESLPNAEFTAMIGLAGALCGILTVCCSHRTA
Ga0181531_108939572	3300014169	Bog	MSTDTSFAARAQEENWLPVLELAIEEVFEIMLGSRVKPEARIVPGSEPSRGYTAMVGLAGALCGILTVCCDKKAAGQMAQAMLGAAAESESQVG
Ga0181526_102437411	3300014200	Bog	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGILTVCC
Ga0181526_102784473	3300014200	Bog	VSTDASFTPRSHEENWLPTLVHAVEEVFEIMLGCKVKPATPSERELPHGEFTAMVGLAGALCGVLTVCCAAKTAGLIGKNMLGGT
Ga0182021_113933463	3300014502	Fen	MSTDTSFVVRSHEENWLPVLELAVEEVFEIMLGCRVKPVAPSEQTPNAEFTAMI
Ga0181511_14309941	3300016702	Peatland	MSASTALTKRSQEENWLPILELAIKEVFEIMLGCRVTPSAETEHGPHGE
Ga0187818_102258531	3300017823	Freshwater Sediment	MSVDTTAAARSHEENWKAILELAVEEVFEIMISCRVKPAPISEKTNAEFT
Ga0187818_105105141	3300017823	Freshwater Sediment	MSVDTSAVVRSHEENWQPILELAVEEVLEIMVGCRVKPAPKSECKTSPEFTGMIGLAGSLCGVLTVSCGAETARQLAKCILGDIVS
Ga0187877_12179571	3300017931	Peatland	MTTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAPSENKPNEEFTAMVGLAG
Ga0187801_101101773	3300017933	Freshwater Sediment	MSTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAQSEHKPNEEFTAMVGLAGALCGILAVCCDAKT
Ga0187854_101766132	3300017938	Peatland	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEIAKRMLGD
Ga0187819_104245321	3300017943	Freshwater Sediment	VSTDISFATRAQEENWLPILELAVEEVFEIMLGFRVKPASSEHVVNWEFTAM
Ga0187847_101091134	3300017948	Peatland	MSTDTSFVARSHEENWLPVLELAVEEVFEIMLGCRVKPMAQSEQVPSREFTAMVGLAGSLCGILTVCCDAKTAAQIAKSMLGDVADSPA
Ga0181520_105218041	3300017988	Bog	MSTDTSLAVRSHEENWLPILELATEEVFEIMLGCRVKPMDKSELPTQPGGFTAMVGLAGALC
Ga0187816_103214721	3300017995	Freshwater Sediment	VSTDISSSTRAQEENWLAILELAVEEVFEIMLGCRVKPVPPSEHAVHGEFTAMVGLAGSL
Ga0187891_12094911	3300017996	Peatland	MSTDTSFVTRSHEENWLPVLELAVEEVFEIMLGTRVKPVAPSEHAPSGEFTAMIGLAGALCGILTVSCDAKTAGQIAK
Ga0187870_13289921	3300017998	Peatland	MNTDASLVTRSHEENWLPILELAVEEVFEIMVGCRVKVAEQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGE
Ga0187805_101375861	3300018007	Freshwater Sediment	VSTDISFATRAQEENWLPILELAVEEVFEIMLGCRVKPASSEHVVNWEFTAMVGLAGALCGVLTVRCDAKT
Ga0187874_101849242	3300018019	Peatland	MNTDASLVTRSHEENWLPILELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMV
Ga0187889_101287173	3300018023	Peatland	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAM
Ga0187885_102994562	3300018025	Peatland	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGILTVCCS
Ga0187863_103619131	3300018034	Peatland	MSTDTSFITRSHEENWLPVLELAIEEVFEIMVGCRVKSVAGSEHRPNGEFTAMI
Ga0187863_108519772	3300018034	Peatland	MSTDTSLAVRSHEENWLPVLELAVEEVFEIMVGQRVKPVSKTEHAPKREFTAMVGLAG
Ga0187890_100056996	3300018044	Peatland	MSTDTSLAVRSHEENWLPVLELAVEEVFEIMVGQRVKPVSKTEHAPKREFTAMVGLAGALCGILTITCARTTAREMTKCML
Ga0187859_100556501	3300018047	Peatland	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQTEHPPSSEFTAMIGLAGALCGVITVCCSAKSA
Ga0187858_101848551	3300018057	Peatland	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGILTV
Ga0187772_105331561	3300018085	Tropical Peatland	MSTDTSLVVRSHEENWLPILELAVEEVFEIMLGCRVKPMAASEHEPNAEFTAMIGLAGALCGI
Ga0187769_114324232	3300018086	Tropical Peatland	VSVDISLAARAHEEDWLPVLELAVEEVFEIMLGCRVKPAASADYTRHWEFTGMVGLAGALRGVLSVCCQATTASQMAKSMLGEAT
Ga0187771_114068042	3300018088	Tropical Peatland	MSTDTSFAARSREENWLPILELAVGEVFEIMLGSRVKPVAPPEHALNNEFTAMIGLAGALCGIL
Ga0182031_12478633	3300019787	Bog	MSIETSLAARSQEENWLPILELAVEEVFEIMLGSRVKPVSKDQHTLSTEFTAMVGLAGALCGILTFCCDRKTARELAKSMLGAEIADSEDQYRTRWAKSAT
Ga0182028_13767171	3300019788	Fen	MSTDTAFAKRSREENWLPILELATREVFEIMLACKVKPVAQSEGKPNAGFTAMVGLAGALCGVVTVCCDAKTAGLIAKACWEKLPKAKNRWGTRSENSAT
Ga0179592_103148253	3300020199	Vadose Zone Soil	MSAAGGLAKRSHEENWLPILELAIQEVFEIMLGCAVKPMAPSEHKANAEFTAMVG
Ga0210389_100463084	3300021404	Soil	MSTDTSLIVRSQEENWLPVLELAIEEVFEIMIGTRVKPVPKSKTPPGGYTAMVGIAGGLCGVLTVA
Ga0210387_104011073	3300021405	Soil	MSTDTSFRTRAHEENWLPVLELAVEEVFEIMLGCRVEPSAQAEQKPKAEFTAMVGLAGALCGILTVRCDAKTAALVAKA
Ga0210387_107172112	3300021405	Soil	MSTDTSLAVRSQEENWLPVLELAIEEVFEIMVGSRVKPVGKTDAPPPGGFTAMVGIAGGLCGILTVTCNKKTAGEIAKAMR
Ga0210390_103040611	3300021474	Soil	MSTDTSLIVRSQEENWLPVLELAIEEVFEIMIGTRVKPVPKSKTSPGGYTAMVGIAGGLCGVLTVACDKKTAGEIAKRMLGPEIAD
Ga0210392_104891753	3300021475	Soil	MSTDTSFRTRAHEENWLPVLELAVEEVFEIMLGCRVKPSAQAEQKPKAEFT
Ga0224521_11346852	3300024233	Soil	MSTDTSFVTRSHEENWLPVLELAVAEVFEIMVGCRVKPAAPSEHTPNGEFTAMIGLAGALCGILTVSCDAKTAGQIAKSMLGDTANSAEEVG
Ga0208189_10755732	3300025444	Peatland	MNTDASLVTRSHEENWLPIIELAVEEVFEIMVGCRVKVAGQSEHKPNEEFTAMVGLAGALCGILTVCCDAKTAGEIAK
Ga0209880_10233314	3300026271	Soil	MSTDTSLATRSHEENWLPILELAVEEVFEIMVGCRVKPVAQSEHTPNAEFTAMVGMAGSLCGILTVCCDANTARQVANCMLGDTADSEEQVADA
Ga0209881_10682472	3300026273	Soil	MSTDTSLATRSHEENWLPILELAVEEVFEIMVGCRVKPVAQSEHTPNAEFTAMVGMAGSL
Ga0209839_101987941	3300026294	Soil	MSTDTSFITRSHEENWLPVLELAVEEVFEIMVASRVKPAQVEHKPSGEITAMIGLAG
Ga0179587_105373142	3300026557	Vadose Zone Soil	VSTDTSLITRSHAENWLPVLELAAEEVFEIMLGCRVKPGPPPEQIPTAEFTAMVGLAGALCGVLTVRCAAKTAAQVAKAMLGDMAESQEQVADA
Ga0208983_10722001	3300027381	Forest Soil	MSAAGGLAKRSHEENWLPILELAIQEVFDIMLGCQVKPMAPSEHKANAEFTAMVGLAG
Ga0209008_11241872	3300027545	Forest Soil	MSTDTSLIVRSQEENWLPVLELAIEEVFEIMVGTRVKPMAKTETPPPGGYTAMVGIAGGL
Ga0209118_10616011	3300027674	Forest Soil	MSAASGLAKRSHEENWLPVLELAIQEVFEIMLGCNVKPVAPAEHQANTEYTAMVGLAGALCGILTV
Ga0209040_104106641	3300027824	Bog Forest Soil	MSTDTSLIVRSKEENWLPVLELATEEVFEIMVGTRVKPLPKGEGTPPGGYTAMVGIAGGLCGILTVTCDKKTAGEIAKAMLGPDIADSEE
Ga0209283_103323371	3300027875	Vadose Zone Soil	MSIDTTFATRSQQENWLPILELSVEEVFEIMLGCRVKPTAQSEPQVNREFTAMVGLAGAL
Ga0209067_105546831	3300027898	Watersheds	MSVDTSAAVRSREENWQPILELAVEEVFEIMVGCRVKPVPKSEHKGRGEFTA
Ga0209067_108579151	3300027898	Watersheds	MSTDISMAARSHEENWLPILELAVEEVFEIMLGCRVKPASKAEQGTVGGCMAMVGLAGALCGILTFTCDPK
Ga0209415_110106941	3300027905	Peatlands Soil	MTTDTSLVTRSHEENWLPIIELAVEEVFEMMVGCRVKVAAQSENKPNEEFTAMVGLAGALCGI
Ga0302166_100472561	3300028652	Fen	MSVDTSLPARAHEENWRPVLELAVEEVFEIMLGCRVKPAATQPPATWKTEFTAMVGLAGSLCGILTFACDQPTAREVAKCM
Ga0302219_103124732	3300028747	Palsa	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGHTPHGEFTAMIGLAGALCGILT
Ga0302219_103654411	3300028747	Palsa	MSTDTSFATRAQEENWLPVLELAIEEVFEIMLGTRVKPEARIALESEPSRGYTAMVGLAGALCGILTVC
Ga0302222_103061731	3300028798	Palsa	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGHTPHGEFTAMIGLAGALCGILTVCCDAKTAGQIAKKMLGDAT
Ga0247275_10781622	3300029817	Soil	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGCRVKPVAQSEHKPNGEYTAMIGLAGALCGILTVCCSAKTAGHIAKIM
Ga0311352_105795203	3300029944	Palsa	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGHTPHGEFTAMIGLAGALCGILTV
Ga0302210_101615962	3300029995	Fen	MSVDTSLPARAHEENWRPVLELAVEEVFEIMLGCRVKPAATQPPATWKTEFTAMVGLAGSLCGILTFACDQPTAREVAKCMLGPEIADS
Ga0302180_100579961	3300031028	Palsa	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGHTPHGEFTAMIGLAGALCG
Ga0302323_1015236422	3300031232	Fen	MSVDTSLPTRAHEENWRPVLELAVEEVFEIMLGCRVKPVATQPPATWKTEFTAMVGLAGSLCGVLTFACDQPTAREVAKCMLGPEIADSEGRFQM
Ga0302325_110932282	3300031234	Palsa	MTSDTTLATRSREENWLPILELAVEEVFEVMVGSRVKPVAHSGVKPREEFTAIV
Ga0302324_1022852601	3300031236	Palsa	MTSDTTLATRSREENWLPILELAVEEVFEVMVGSRVKPVAHSGVKPREEFT
Ga0265332_100142871	3300031238	Rhizosphere	MSTDTSLVVRSHEENWLPILELAVEEVFEIMLGCRVKPVPKGENAVTGEYTAMVGLAGALCGILTLTCNK
Ga0170818_1077665241	3300031474	Forest Soil	MTTDTTFVTRSHEENWQPVLELAIEEVFEIMVGCRVKPTALAVHSPEHEFTAMV
Ga0307476_105621003	3300031715	Hardwood Forest Soil	MSTDPSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGLTPHREFTAMIGLAGALCGILTVCCDAKTAGQIAKTMLGDTT
Ga0307479_114419782	3300031962	Hardwood Forest Soil	MSAAGGLVKRSHEENWLPILELAIQEVFEIMLGSRVSTVATSEHQANAEFTAMVGLAGALCGIMTV
Ga0307470_113176821	3300032174	Hardwood Forest Soil	MSAAGGLAKRSREENWLPILELAIQEVFEIMLGCQVKPIVLSEHTPSGEFTAMVGVAGALCGVLTVSCDAKTARHI
Ga0307471_1033153581	3300032180	Hardwood Forest Soil	MSAAGGLVKRSHEENWLPILELAIQEVFEIMLGSRVNTVATSEHQANAEFT
Ga0307472_1012415323	3300032205	Hardwood Forest Soil	MSTDTTLTTRSHEENWQPVLELAVEEVFEIMLGCRVKPVAKSEHPTSRDFTAMVGLAGALCGILTICCSSITAHQL
Ga0335078_107596101	3300032805	Soil	MSTDTSLTARSHEENWLPVLELAIEEVFEIMVGRRVKPAPKTETGPPGGFTAMVGIAGALCGILTVSCDKKTAREVAK
Ga0335078_108914351	3300032805	Soil	MSTDTSLLMRSHQENWLPVLELAIEEVFEIMVGQRVKPAPKTEELPPGGFTAMVGIAGALCGILTISCSKKTA
Ga0335081_110863403	3300032892	Soil	MTTDTSLAVRSHEENWLPILELAVEEVFEIMLGHRVKPAEGLQKVGSTEFTAMVGLAGALCGILTLCCDRKTARQLAS
Ga0326727_101444441	3300033405	Peat Soil	MSTDTSFVTRSHEENWLPVLELAVEEVFEIMLGTRVKPAEKSEHTPNGEFTAMIGLAGSLCGILTVSCDAKTAGQIARSMLDDTAKSAE
Ga0326727_102701363	3300033405	Peat Soil	MSTDISFATRSREENWLPVLELAVEEVFEIMVGCRVKPVAQFEHTPNEEFTAMIGLAGALCGILTVSCDAKTAGQ
Ga0326726_119923532	3300033433	Peat Soil	MSIDTSSAVRSHEENWQPILELAVEEVFEIMVGCRVKPAPKSAHKANGEFTAMIG
Ga0371490_11391272	3300033561	Peat Soil	MSTDTSLTTRSHQENWLPVLELAIEEVFQIMLGQRVTPAAPSDGHDPGGFTAMVGIAGALCGILTISCSKKAARDVAICMIGPEIADSEEQV
Ga0314867_050672_1_174	3300033808	Peatland	MSTEMSLAMHAQDESWLPILELAVEEVFEIMLGHQVRPIAKEGQRPPTGFTAMVGLAG
Ga0334828_073546_623_883	3300033822	Soil	MSTDTSFATRSREENWLPVLELAVEEVFEIMVGCRVKPVAQFEHTPNEEFTAMIGLAGALCGILTVSCDAKTAHQVAKSMLGDTANS
Ga0334847_036762_3_185	3300033826	Soil	MSTDTSFVVRSHEENWLPVLELAVEEVFEIMLGCRVKPVAPSEQTPNAEFTAMIGLAGAL
Ga0326724_0320995_385_651	3300034091	Peat Soil	VSTDISFATRAQEENWLPILELAVEEVFEIMLGCRVKPASSEHVVNWEFTAMVGLAGALCGVLTVRCDAKTAHQVAKSKGMRSERFAT
Ga0370484_0072731_2_283	3300034125	Untreated Peat Soil	MSTDISFAARSHEENWLPILELAVEEVFEMMVGCRVKPVAQSEHQPNGEFTAMVGLAGSLCGILTVCCDAKTAGQIAKSMLGDTATSQEEVEDA
Ga0370515_0483861_1_249	3300034163	Untreated Peat Soil	MSTDTSFITRSHEENWLPVLELAVEEVFEIMLGSRVKPVAPSEGHTPHGEFTAMIGLAGALCGILTVCCDAKTAGQIAKKMLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences