Metagenome Family F055078

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055078
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	81 residues
Representative Sequence	MNNWQTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTATLEMILEFMERERIQ
Number of Associated Samples	97
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.41 %
% of genes near scaffold ends (potentially truncated)	28.78 %
% of genes from short scaffolds (< 2000 bps)	79.14 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.799 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.547 % of family members)
Environment Ontology (ENVO)	Unclassified (35.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.187 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.44% β-sheet: 14.68% Coil/Unstructured: 56.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01381	HTH_3	2.88
PF04392	ABC_sub_bind	2.16
PF00589	Phage_integrase	2.16
PF02781	G6PD_C	1.44
PF02979	NHase_alpha	0.72
PF00378	ECH_1	0.72
PF13403	Hint_2	0.72
PF00052	Laminin_B	0.72
PF08734	GYD	0.72
PF07045	DUF1330	0.72
PF02371	Transposase_20	0.72
PF13594	Obsolete Pfam Family	0.72
PF08996	zf-DNA_Pol	0.72
PF07690	MFS_1	0.72
PF00239	Resolvase	0.72
PF14659	Phage_int_SAM_3	0.72
PF13481	AAA_25	0.72
PF03401	TctC	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.16
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	1.44
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.72
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
All Organisms	root	All Organisms	48.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
cellular organisms	root	All Organisms → cellular organisms	48.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.51 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.60 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.72 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.44 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.44 %
unclassified Defluviicoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.44 %
Defluviicoccus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	0.72 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.72 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.72 %
Agrobacterium vitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium vitis	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10064517	Not Available	585	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1037173	Not Available	764	Open in IMG/M
3300000956\|JGI10216J12902_118443534	Not Available	2306	Open in IMG/M
3300003505\|JGIcombinedJ51221_10127656	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300005332\|Ga0066388_100182601	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300005332\|Ga0066388_100198949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2623	Open in IMG/M
3300005332\|Ga0066388_100657873	Not Available	1661	Open in IMG/M
3300005332\|Ga0066388_100792633	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005332\|Ga0066388_101000586	Not Available	1400	Open in IMG/M
3300005332\|Ga0066388_101600316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300005332\|Ga0066388_104597457	Not Available	702	Open in IMG/M
3300005332\|Ga0066388_104759706	Not Available	690	Open in IMG/M
3300005332\|Ga0066388_108342909	Not Available	516	Open in IMG/M
3300005367\|Ga0070667_100458398	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005467\|Ga0070706_100245514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300005518\|Ga0070699_101127143	Not Available	720	Open in IMG/M
3300005574\|Ga0066694_10271800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300005713\|Ga0066905_100320862	Not Available	1225	Open in IMG/M
3300005764\|Ga0066903_100023268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6712	Open in IMG/M
3300005764\|Ga0066903_100917275	Not Available	1588	Open in IMG/M
3300005764\|Ga0066903_100927028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	1580	Open in IMG/M
3300005764\|Ga0066903_101000394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1528	Open in IMG/M
3300005764\|Ga0066903_101206677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1405	Open in IMG/M
3300005764\|Ga0066903_101690949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300005764\|Ga0066903_101828368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300005764\|Ga0066903_103187058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	887	Open in IMG/M
3300005764\|Ga0066903_103557406	Not Available	839	Open in IMG/M
3300005764\|Ga0066903_107439646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300006046\|Ga0066652_100988002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300006175\|Ga0070712_100159320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1741	Open in IMG/M
3300006175\|Ga0070712_101139611	Not Available	677	Open in IMG/M
3300006175\|Ga0070712_101877838	Not Available	524	Open in IMG/M
3300006845\|Ga0075421_100035038	All Organisms → cellular organisms → Bacteria	6354	Open in IMG/M
3300006854\|Ga0075425_102409341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300009012\|Ga0066710_102972553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300009137\|Ga0066709_100886851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1299	Open in IMG/M
3300009147\|Ga0114129_10520704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1550	Open in IMG/M
3300009792\|Ga0126374_11817789	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300010046\|Ga0126384_10331420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1262	Open in IMG/M
3300010046\|Ga0126384_10495837	Not Available	1052	Open in IMG/M
3300010047\|Ga0126382_10498946	Not Available	978	Open in IMG/M
3300010358\|Ga0126370_10334495	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300010358\|Ga0126370_12119896	Not Available	552	Open in IMG/M
3300010359\|Ga0126376_10325296	Not Available	1350	Open in IMG/M
3300010360\|Ga0126372_10849717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300010361\|Ga0126378_10243342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1890	Open in IMG/M
3300010366\|Ga0126379_12040431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	676	Open in IMG/M
3300010376\|Ga0126381_104780725	Not Available	521	Open in IMG/M
3300010376\|Ga0126381_104964993	Not Available	510	Open in IMG/M
3300010398\|Ga0126383_10139369	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300010398\|Ga0126383_12000860	Not Available	667	Open in IMG/M
3300010398\|Ga0126383_12455615	Not Available	606	Open in IMG/M
3300010403\|Ga0134123_13015473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300012198\|Ga0137364_11050666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012201\|Ga0137365_10506031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	888	Open in IMG/M
3300012202\|Ga0137363_10510002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300012210\|Ga0137378_11248802	Not Available	659	Open in IMG/M
3300012359\|Ga0137385_10505902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300012582\|Ga0137358_10512336	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300012948\|Ga0126375_10206813	Not Available	1294	Open in IMG/M
3300012948\|Ga0126375_11902375	Not Available	522	Open in IMG/M
3300012961\|Ga0164302_11071966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium vitis	634	Open in IMG/M
3300012971\|Ga0126369_11077171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300012971\|Ga0126369_11872724	Not Available	688	Open in IMG/M
3300012971\|Ga0126369_13649367	Not Available	504	Open in IMG/M
3300012976\|Ga0134076_10485190	Not Available	562	Open in IMG/M
3300012977\|Ga0134087_10576902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300014968\|Ga0157379_11776647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	605	Open in IMG/M
3300015372\|Ga0132256_103273445	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300016270\|Ga0182036_10794031	Not Available	771	Open in IMG/M
3300016319\|Ga0182033_10969147	Not Available	755	Open in IMG/M
3300016341\|Ga0182035_10094104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2177	Open in IMG/M
3300016371\|Ga0182034_11927873	Not Available	522	Open in IMG/M
3300016404\|Ga0182037_10112079	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300016404\|Ga0182037_10307686	Not Available	1276	Open in IMG/M
3300016422\|Ga0182039_12155343	Not Available	514	Open in IMG/M
3300018027\|Ga0184605_10004317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5026	Open in IMG/M
3300018061\|Ga0184619_10207480	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300018431\|Ga0066655_11161857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300018433\|Ga0066667_10551169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300018433\|Ga0066667_11595202	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300020579\|Ga0210407_11030568	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300021361\|Ga0213872_10064822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1650	Open in IMG/M
3300021405\|Ga0210387_10765856	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300021560\|Ga0126371_12733876	Not Available	598	Open in IMG/M
3300021560\|Ga0126371_13653138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300025910\|Ga0207684_11267333	Not Available	608	Open in IMG/M
3300025915\|Ga0207693_10085041	All Organisms → cellular organisms → Bacteria → Proteobacteria	2478	Open in IMG/M
3300025915\|Ga0207693_10836313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	708	Open in IMG/M
3300026310\|Ga0209239_1170621	Not Available	834	Open in IMG/M
3300027104\|Ga0208095_1005927	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300027909\|Ga0209382_10075672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3972	Open in IMG/M
3300028716\|Ga0307311_10014168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1930	Open in IMG/M
3300028717\|Ga0307298_10253271	Not Available	523	Open in IMG/M
3300028718\|Ga0307307_10217702	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300028782\|Ga0307306_10118088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300028787\|Ga0307323_10071863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300028791\|Ga0307290_10317105	Not Available	571	Open in IMG/M
3300028796\|Ga0307287_10346301	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300031545\|Ga0318541_10310733	Not Available	879	Open in IMG/M
3300031546\|Ga0318538_10097446	Not Available	1514	Open in IMG/M
3300031573\|Ga0310915_10020022	All Organisms → cellular organisms → Bacteria → Proteobacteria	4056	Open in IMG/M
3300031680\|Ga0318574_10654763	Not Available	616	Open in IMG/M
3300031681\|Ga0318572_10613550	Not Available	648	Open in IMG/M
3300031713\|Ga0318496_10337699	Not Available	832	Open in IMG/M
3300031719\|Ga0306917_11288436	Not Available	566	Open in IMG/M
3300031744\|Ga0306918_10136368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1797	Open in IMG/M
3300031744\|Ga0306918_11141716	Not Available	603	Open in IMG/M
3300031751\|Ga0318494_10556086	Not Available	670	Open in IMG/M
3300031753\|Ga0307477_11151756	Not Available	505	Open in IMG/M
3300031771\|Ga0318546_10744054	Not Available	690	Open in IMG/M
3300031781\|Ga0318547_10183879	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031782\|Ga0318552_10239004	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300031890\|Ga0306925_11841728	Not Available	578	Open in IMG/M
3300031897\|Ga0318520_10874663	Not Available	565	Open in IMG/M
3300031910\|Ga0306923_11379320	Not Available	743	Open in IMG/M
3300031910\|Ga0306923_12567358	Not Available	501	Open in IMG/M
3300031912\|Ga0306921_10045020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4994	Open in IMG/M
3300031912\|Ga0306921_10958292	Not Available	968	Open in IMG/M
3300031912\|Ga0306921_11076817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300032001\|Ga0306922_11562368	Not Available	658	Open in IMG/M
3300032089\|Ga0318525_10390045	Not Available	714	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.81%
Host-Associated	Host-Associated	7.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.37%
Plants	Host-Associated → Plants	7.19%
Aquatic	Environmental → Aquatic	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.76%
Sediment	Environmental → Aquatic → Sediment	1.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.35%
Loam	Environmental → Terrestrial → Soil → Loam	23.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.44%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.44%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100645172	3300000858	Soil	MSDWQTYRNGNPRESWNLERLARHRAAKLGYRVHRSRRRKGPDNAGKFMLIHKANSTVLLGAGYTATVEMIFEFIERAADALTELVVQ*
AP72_2010_repI_A001DRAFT_10371732	3300000893	Forest Soil	MSSRVYEPERPDTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS*
JGI10216J12902_1184435345	3300000956	Soil	MSDWQTYRNGYPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGVGYTATVEMILNFMEREQRQ*
JGIcombinedJ51221_101276561	3300003505	Forest Soil	MTDWERYRNGSPRQPSDLERLARHRGAKLGYRVHRSRRRKGPGNAGELMLIHKASSTVLLGAGYTASVEIILEFMARERMQ*
Ga0066388_1001826012	3300005332	Tropical Forest Soil	MSQMTDWQTYRNGNPRDRWSSERMARHRAAKLGYRLHRSRRRKGRDNAGEFMLLHKASSTVLLGARFTATLEMILEFMEREATALAGAKGPHPPIG*
Ga0066388_1001989492	3300005332	Tropical Forest Soil	MNDWQTYRNGNPRSPWDLERLARHRGAKLGYRLHRSRRHKGPDNAGGLMLIHRASSTLLLGAGYTATPEMILEFIERERLQ*
Ga0066388_1006578731	3300005332	Tropical Forest Soil	TYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKKSSTVLLGSGFTATLEMILKFLEQESGCQELTASFH*
Ga0066388_1007926331	3300005332	Tropical Forest Soil	LTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGARFTATMEMILEFMERERMQ*
Ga0066388_1010005861	3300005332	Tropical Forest Soil	MGDWQTYRNGYPREPWNLERLARHRAAKLGYRVHRSRRRKGRDNAGRLMLIHKASSTVLLGAGYTATLEMILNFMEREQRQ*
Ga0066388_1016003162	3300005332	Tropical Forest Soil	MTDWQTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNAGNLMLIHKASSTVLLGIGYTATVEMILKFMERERMHVG*
Ga0066388_1045974571	3300005332	Tropical Forest Soil	MTNWLTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGAFMLLHKASSTVLLGAGFTATMEMILEFMEREQMQ*
Ga0066388_1047597062	3300005332	Tropical Forest Soil	MTNSNRNLPFKDLSTNWQTFRNGTPRESWHLERLARHRAAKLGYRLHRSRKRKDGKEFMLIHKASSTVLLGAGYTATVESILEFLERERMQ*
Ga0066388_1077323761	3300005332	Tropical Forest Soil	MSDWQTYRNGYPREPWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGARF
Ga0066388_1083429091	3300005332	Tropical Forest Soil	MNDWYRNGYPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAVRLMLIHKASSTVLLGAGYTATVEMILNFMEREQRR*
Ga0070667_1004583981	3300005367	Switchgrass Rhizosphere	QPWDLERLARHRASKLGYRVHRSRRRKGPKNAGELMLIHKASSTVLLGTGYTASVAMILDFIERERMQ*
Ga0070706_1002455142	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLLGVGYKMTLLPRCALPLRPLRH*
Ga0070699_1011271432	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQTYRNGNPRNNTDLQRLARHWAAKLGYRVHRSRRRKGPDNAGKFMLLHKASSTVLLGSGFTATLEMVLEFMEREATALAGGYPH*
Ga0066694_102718001	3300005574	Soil	MNNWQTYRNGNPRETWNLERLARHRAAKLGYCVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ*
Ga0066905_1003208622	3300005713	Tropical Forest Soil	MADWQTYRNGNPRRRCDLERLARHRAAKFGYRVHRSRRRKGDDNAGELMLIHKRSSTVLLGAGFTATVEMILEFIERERHALMEVFSRAQR*
Ga0068861_1027118271	3300005719	Switchgrass Rhizosphere	MTDWQTYRNGNPREIWDLERLSRHRAAKLGYRVHRSRRRKGSNNAGQFMLVHKGSSTVLLGDQPHGTSGGDAW*
Ga0066903_1000232684	3300005764	Tropical Forest Soil	MTSIDRSWRTYPRTGLPRDIWNLERLARHRAAKLGYRLHRSRRRMDGRGFMLIHKASSTVLLGAGYTATVESILEFLEHERMQ*
Ga0066903_1009172753	3300005764	Tropical Forest Soil	RRYEQSDWQTFRTGYPRESGHLERLARHRAAKLGYRMHRSRRRKGPNNAGEFMLIRKRSSTVLLGAGFTATIEMILDFIERERQHAKKS*
Ga0066903_1009270283	3300005764	Tropical Forest Soil	MTGWQTYRNGNPRQPWDLERLARHHAAKLGYRVHRSRRRKGPDNAGNLMLIHKASSTVLLGAGYTATVEMILKFMERERMHSSTAP
Ga0066903_1010003942	3300005764	Tropical Forest Soil	MSDWQTYRNGYPRQPWNLERLARHRAAKLGYPVHRSRRREGRDNAGRFMLIHKASSTVLLGAGYTATIEMILTFMERERMH*
Ga0066903_1012066772	3300005764	Tropical Forest Soil	MSDWQTYRNGYPREPWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGARFTATMEMILEFMERERMQ*
Ga0066903_1016909493	3300005764	Tropical Forest Soil	MSDWQTYRNGYPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAVRLMLIHKASSTVLLGAGYTATVEMILNFMEREQR
Ga0066903_1018283684	3300005764	Tropical Forest Soil	MTNWQTYQNGYPREPWNLERLARHRAAKLGYRVHRSRRRKGRDNAGRLMLIHKASSTVLLGGGYTATVEMILNFVEREQRQ*
Ga0066903_1031870581	3300005764	Tropical Forest Soil	MTDWQAYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNAGSLMLIHKASSTVLLGTGYTATIEMILKFMERERMQ*
Ga0066903_1035574062	3300005764	Tropical Forest Soil	MTNSNRNLPFKDLSTNWQTFRNGTPRECFHLERLARHRAAKLGYRLHRSRSRKGPDNAGEFVLIHRASSTVLLGAGYTATPEIILEFVERERKQAEQLEAQKKH*
Ga0066903_1074396461	3300005764	Tropical Forest Soil	NGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGNLMLLHEASSTVLLGTGYTATVEMILEFMERERMHVGRSFA*
Ga0066652_1009880022	3300006046	Soil	MNNWQTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ*
Ga0070712_1001593202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNNWQTYRNGNTREIWNLERLARHRAAKLGYRVQRSRRRKGRDNAGEFMLIHKASSTVLVGAGYTANLETILSFMERERMQ*
Ga0070712_1011396112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNVGTGYTATVEMILKFMERERMH*
Ga0070712_1018778381	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWERYRNGSPRQPSDLERLARHRAAKLGYRVHRSRRRKGPGNAGELMLIHKASSTVLLGAGYTASVEIIL
Ga0075421_1000350384	3300006845	Populus Rhizosphere	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGDFMLLHKKSSTVLLGAGYTATLEMILEFVERERTALAGAAH*
Ga0075425_1024093412	3300006854	Populus Rhizosphere	MTDWQTYRNGNPRNNTDLQRLARHWAAKLGYRVHRSRRRKGPDNAGKFMFHKASSTVLLGAGYTANL*
Ga0066710_1029725531	3300009012	Grasslands Soil	MNNWQTYRNGNLRETWNLERLARHRAAKLGYCVHRSRRRKGHDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ
Ga0066710_1038221851	3300009012	Grasslands Soil	MNDWHTYRNGNPRQPWDLERLARHRAAKLGYRAHRSRRRKGPQNAGGVMLIHKASST
Ga0066709_1008868511	3300009137	Grasslands Soil	MNNWQTYRNGNLRETWNLERLARHRAAKLGYCVHRSRRRKGHDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ*
Ga0114129_105207043	3300009147	Populus Rhizosphere	MMRAHSRRNRFDDWHTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNAGNLMLIHKVSSTVLLGAGYTATVKMILKFMERERMH*
Ga0126374_118177891	3300009792	Tropical Forest Soil	MTNWLTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGARFSATMEMILEFMERERMQ*
Ga0126384_103314201	3300010046	Tropical Forest Soil	MTGWQTYRNGNPRQPWNLERLARHRAAKLGYRVHRSRRRKGPDNAGELMLIHEASSTVLLGVGYTATVEMILTFMERERMQ*
Ga0126384_104958372	3300010046	Tropical Forest Soil	MAGWQTYRNGNPRRRCDLERLARHRAAKFGYRVHRSRRRKGDDNAGELMLIHKRSSTVLLGAGFTATVEMILEFIERERHALMEVFSRAQR*
Ga0126382_104989462	3300010047	Tropical Forest Soil	MLPMTRGYSKEESAMTGWQTHRNGNPRQPWDLERLARHHAAKLGYRVHRSRRRKGRDNAGRLMLIHKASSTVLLGAGYTATVEMILNFMEREQRQ*
Ga0126370_103344952	3300010358	Tropical Forest Soil	MTNSNRNLPFKDLSTNWQTFRNGTPRECFHLERLARHRAAKLGYRLHRSCSRKGPDNAGEFVLIHRASSTVLLGAGYTATPEIILEFVERERKQAERLEAQKKH*
Ga0126370_121198962	3300010358	Tropical Forest Soil	MTNWRTYRNGNSRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGAFMLLHKASSTVLLGAGFTATTEMILEFMEREQMQ*
Ga0126376_103252961	3300010359	Tropical Forest Soil	MTNSNRNLPFKDLSTNWQTFRNGTPRESWHLERLARHRAAKLGYRLHGSRKRKDGKEFMLIHKASSTVLLGAGYTATVESILEFLERERM
Ga0126372_108497171	3300010360	Tropical Forest Soil	MTNWLTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLLHKASSTVLLGARFTATLEMILEFMEREATALAGAKGPHPPIG*
Ga0126378_102433421	3300010361	Tropical Forest Soil	MTNSNGDLPFKDLSTNWQTFRNGTPRESWHLERLARHRAAKLGYRLHRSRRRKGPDNAGEFVLIHKASSTVLLGAGYTATPEIILEFVERERKQAEQLEAQKKH*
Ga0126379_120404312	3300010366	Tropical Forest Soil	MSDWQTYRNGYPREPWNLERLARHRAAKLGYRVHRSRRRKARDNAGRLMLIHKASSTVLLGAGYTATVEMILNFMEREQRR*
Ga0126379_133407302	3300010366	Tropical Forest Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVRRSRRRKGRDNAGEFAEAARTRA*
Ga0126381_1047807252	3300010376	Tropical Forest Soil	YPRQPWNLERLARHRAAKLGYPVHRSRRREGRDNAGRFMLIHKASSTVLLGAGYTATIEMILTFMERERMH*
Ga0126381_1049649931	3300010376	Tropical Forest Soil	MTNSNRNLPFKDLSTNWQTFRNGTPRECFHLERLARHRAAKLGYRLHRSRSRKGPDNAGEFVLIHRASSTVLLGAGYTATPEIILEFVERERKQAEQLEAQKKY*
Ga0126383_101393692	3300010398	Tropical Forest Soil	MAGWQTYRNGNPRRRCDLERLARHRAAKFGYRVHRSRRRKGDDNAGELMLIHKRSSTVLLGAGFTATVEMILEFIERERHADGGIQQSSALRPDLGPLG*
Ga0126383_120008601	3300010398	Tropical Forest Soil	MGDWQTYRNGYPREPWNLERLARHRAAKLGYRVHRSRRRTGRDNAGRLTLIHRASSTVLLGAGYTATVEMILNFMEREQRQ*
Ga0126383_124556151	3300010398	Tropical Forest Soil	MSDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLLGVGYTANLQMIMEFMERERIQ*
Ga0134123_130154732	3300010403	Terrestrial Soil	NLERLARHRAAKLGYRVQRSRRRKGRDNAGEFMLIHKASSTVLVGAGYTANLETILSFMQRERMQ*
Ga0137364_110506662	3300012198	Vadose Zone Soil	MNNWQTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTATLEMILEFMERERIQ*
Ga0137365_105060311	3300012201	Vadose Zone Soil	VNNWQKYRNGNPREPWNLERLARHRATKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTANLATIPEFVERERPQ
Ga0137363_105100021	3300012202	Vadose Zone Soil	MTDWQTYGNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGDFMLLHKVSSTVLLGAGYTATLDMILEFMERERMQ*
Ga0137378_112488021	3300012210	Vadose Zone Soil	MTDWQTYRNGNPREIWNLERLARHRSAKLGYRVHRSRRRKGRDNASEFMLVHEASSTVLLGAGYTANLATIPEFVERERPQ*
Ga0137385_105059021	3300012359	Vadose Zone Soil	MNNWQTYRNGNLRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLLHKASSTVLLGAGLILPS*
Ga0137358_105123361	3300012582	Vadose Zone Soil	TDWQTYRNGSPRQPWDLERLARHRATKLGYRVHRSRRRKGPDNPGNLMLIHKVSSTVLLGAGYTAIVEMILKFMERERRQ*
Ga0126375_102068131	3300012948	Tropical Forest Soil	MADWQTYRNGNPRRRCDLERLARHRAAKFGYCVHRSRRRKGDDNAGELMLIHKRSSTVLLGAGFTATVEMILEFIERERHALMEVFSRAQR*
Ga0126375_119023751	3300012948	Tropical Forest Soil	MSDWQTYRNGYPRQTWDLERLARHRAAKLGYRVHRSRRRESRYNAGRLMLIHKASSTVLLGAGYTATVEMILNFMEREQRQ*
Ga0164302_110719662	3300012961	Soil	MRDWQTYRNGNPRAIWDLERLSRHRAAKLGYRVHRSRRRKSRDNAGEFMLIHKASSTVLLGAGYTANWETILALRERQLMH*
Ga0126369_110771713	3300012971	Tropical Forest Soil	MTGWRTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGNLMLLHEASSTVLLGTGYTATVEMILEFMERERMHVGRSFA*
Ga0126369_118727242	3300012971	Tropical Forest Soil	MTDWQTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNAGSLMLIHKASSTVLLGTGYTATIEMILKFMERERKQAEQLEAQKKH*
Ga0126369_136493672	3300012971	Tropical Forest Soil	DWQTYRNGYPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGELMLLHKASSTVLLGVGYTATVEMILNFMEREQRQ*
Ga0134076_104851902	3300012976	Grasslands Soil	VNNWQKYRNGNPREPWNLERLARHRAAKLGYCVHRSRRRKGRDNASEFMLVHEASSTVLLGAGYTANLATIPEFVERERPQ*
Ga0134087_105769022	3300012977	Grasslands Soil	MNNWQTYRNGNLRETWNLERLARHRAAKLGYRVHRSRRRKVRDNAGEFMLVHKASSTVLLGAGYTANVETILEFMERERMQ*
Ga0157379_117766472	3300014968	Switchgrass Rhizosphere	MTDWQFYRNGYPRQPWDLERLARHRASKLGYRVHRSRRRKGPKNAGELMLIHKASSTVLLGTGYTASVAMILDFIERERMQ*
Ga0132256_1032734452	3300015372	Arabidopsis Rhizosphere	MNDWETYRNGNPRSPWDLERLARHRGAKLGYRVHRSRRRKGRDNAGGRMLIHKASSTVLLGAGYTAITEMILEFIERDRL
Ga0182036_107940312	3300016270	Soil	MTTRENQKMTNWQTYRNGNPRSIWNLERLARHRATKLGYRMHRSRSRKGRDNAGEFMLIHKASSTVLLGVGYTANAEMILEYMERKRTHAAADHSTHH
Ga0182033_109691471	3300016319	Soil	MTTRENEKMTNWQTYRNGNPRAIWNLERLARHRATKLGYRMHRSRSRKGRDNAGEFMLIHKASSTVLLGAGYTANAEMILEYMERKRTHAAADHSTHH
Ga0182035_100941044	3300016341	Soil	LMSSRVYEPERPDTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS
Ga0182034_119278731	3300016371	Soil	VTGWQTYRNGNPRQPWDSERLARHHAAKLGYRVHRSRRRKGSDDTSGLMLIHKASSTVLLGAGYTATVEMILKFMER
Ga0182040_110128221	3300016387	Soil	MTDWQTYRNGNPREPWDLERLARHHAAKLGYRVHRSRRRKGPDNASGLMLIHKASSTVLL
Ga0182037_101120794	3300016404	Soil	VNNWQTYRNGNPRDIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKASSTVLLGAGYSANLETILEFIKRERMQ
Ga0182037_103076862	3300016404	Soil	MTTRENEKMTNWQTYRNGNPRSISNLERLARHRATKLGYRMHRSRSRKGRDNAGEFMLIHKASSTVLLGVGYAANLS
Ga0182037_113147802	3300016404	Soil	VTGWQTYRNGNPRQPWDSERLARHHAAKLGYRVHRSRRRKGSDDTSGLMLIHKASSTVLLGAGYTA
Ga0182039_121553432	3300016422	Soil	WDLERLARHRAAKLGYRVHRSRRRKGPDNAGNLMLSHQASSTVLLGTGYTATVEMILKFMERERMHSSTPGRARWSKANGPS
Ga0184605_100043175	3300018027	Groundwater Sediment	MSDWRTYRNGNPRQTWDLERLARHRAAKFGYRVHRSRRRNGPDNAGKLMLTHKASSTVLLGAGYSATAEMILQFVQGELLQSTRYSPHQRIPDFLRTARH
Ga0184619_102074803	3300018061	Groundwater Sediment	MGAVKPMTDWRTFPTTGVPRDAGYLERLARHRGAKLGYRVHRSRRRKGRDNAGDFMLIHKASSTVVLGAGFTASLEAILDF
Ga0066655_111618571	3300018431	Grasslands Soil	MNNWQTYRNGNPRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ
Ga0066667_105511693	3300018433	Grasslands Soil	VKSWQTYWNGNVRPPWALEQLARQRAAKLGYRVHRSCRRKGPDNAGNLMLIHKASSTVLLGAGYTATPEMILEFLERERTQSRRYSPRRLVADLLRSMCH
Ga0066667_115952022	3300018433	Grasslands Soil	MNNWQTYRNGNLRETWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLVHKASSTVLLGAGYTANLETILEFMERERMQ
Ga0066662_107231202	3300018468	Grasslands Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNACEFMLIHKASSTVLLGAKHANDKSTKRLH
Ga0210407_110305681	3300020579	Soil	RRLGSSSNGSAKGKAESLGKREPAMTDWERYRNGSPRQPSDLERLARHRGAKLGYRVHRSRRRKGPGNAGELMLIHKASSTVLLGAGYTASVEIILEFMARERMQ
Ga0213872_100648221	3300021361	Rhizosphere	NVPNGNLRQPWDLERLVRHRAAKLGYCAHRSRRRKGPDNAGNLMLIHKASSTVLLGAGYTATVEMIPKFMERERMPDAGSPSLSVRM
Ga0210387_107658562	3300021405	Soil	MTDWQTYWNGSPRQPWDLERLARHRAAKLGYRVHRSRRRKGPGNAGNLMLIHKGSSTVLLGAGYTATVEMILNFMERERTQ
Ga0126371_127338761	3300021560	Tropical Forest Soil	MSDWQTYRNGYPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGRLMLIHKASSTVLLGAGYTATVEMILNFMEREQRQ
Ga0126371_136531382	3300021560	Tropical Forest Soil	MTGWRTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGRDNAGNLMLLHEASSTVLLGTGYTATVEMILEFMERERMHVGRSFA
Ga0207692_110817371	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQANRHGYQRDPVHLERLARHRAAKLGYRVHRSRRCEGPDKAGNFMLIHKA
Ga0207684_112673331	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLLGVGYKMTLLPRCALPLRPLRH
Ga0207693_100850413	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TYRNGNPREIWNLERLARHRAAKLGYRVQRSRRRKGRDNAGEFMLIHKASSTVLVGAGYTANLETILSFMERERMQ
Ga0207693_108363131	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTDWQTYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPDNVGNLMLIHKVSSTVLLGPGYTATVEMILKFMERERMH
Ga0207675_1019012201	3300026118	Switchgrass Rhizosphere	MTDWQTYRNGNPREIWDLERLSRHRAAKLGYRVHRSRRRKGSNNAGQFMLVHKGS
Ga0209239_11706212	3300026310	Grasslands Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGPDNAGKCMLLHKASSTVLLGAGFTATVESMLEFMERERIQ
Ga0208095_10059271	3300027104	Forest Soil	MTDWERYRNGSPRQPSDLERLARHRAAKLGYRVHRSRRRKGPGNAGELMLIHKASSTVLLGAGYTASVEIILEFMARERMQ
Ga0209382_100756722	3300027909	Populus Rhizosphere	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGDFMLLHKKSSTVLLGAGYTATLEMILEFVERERTALAGAAH
Ga0307311_100141683	3300028716	Soil	MSDWRTYRNGNPRQTWDLERLARHRAAKFGYRVHRSRRRKGPDNAGKLMLIHKASSTVLLGAGYSATAEMILQFVQGELLQSTRYSPHQRIPDFLRTARH
Ga0307298_102532712	3300028717	Soil	MTDWQSYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPNNAGELMLIHKASSTVLLGTGYTASAAMILNFMERE
Ga0307307_102177022	3300028718	Soil	MSDWRTYRNGNPRQTWDLERLARHRAAKFGYRVHRSRRRKGPDNAGKLMLIHKASSTVLLGAGYSATAEMILQFVQGELLQSTRYSPHQRIPDFLRTA
Ga0307306_101180882	3300028782	Soil	MSDWRTYRNGNPRQTWDLERLARHRAAKFGYRVHRSRRRKGPDNAGKLMLIHKASSTVLLGAGYSATAEMILQF
Ga0307323_100718632	3300028787	Soil	MSDWRTYRNGNPRQTWDLERLARHRAAKFGYRVHRSRRRKGPDNAGKLMLIHKASSTVLLGAGYSATAEMILQFVQGELLQSTRYSPH
Ga0307290_103171051	3300028791	Soil	MTDWQSYRNGNPRQPWDLERLARHRAAKLGYRVHRSRRRKGPNNAGEHMLIHKASSTVLLGTGYTASVAMILNFMERERMQ
Ga0307287_103463011	3300028796	Soil	MGTVKPMTDWRTYPTTGYPRDSGALQRLARHRGAKLGYRVHRSRRRKGRDNAGDFMLIHKASSTVVLGAGFTASLEAILDFIERE
Ga0318541_103107332	3300031545	Soil	MADWQTYRNGNPRRRCDLERLARHRAAKFGYRVHRSRRRKGDDNAGELMLIDKRSSTVLLGAGFTATVEMILEFIERERHALMEVFSRAPALRP
Ga0318538_100974461	3300031546	Soil	VNNWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKASSTVLLGAGYSANLETILEFIKRERMQ
Ga0310915_100200224	3300031573	Soil	MTGWQTYRNGNPREPWDLERLARHHAAKLGYRVHRSRRRKGPDNASGLMLIHKASSTVLLGAGYTATVEMILKFMERERIQ
Ga0318542_107617232	3300031668	Soil	VNNWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKASSTVLL
Ga0318561_104288841	3300031679	Soil	YRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS
Ga0318574_106547632	3300031680	Soil	VTGWQTYRNGNPRQPWDSERLARHHAAKLGYRVHRSRRRKGSDDTSGLMLIHKASSTVLLGAGYTATVE
Ga0318572_106135502	3300031681	Soil	RWDLERLARHHAAKLGYRVHRSRRRKGPDNAGGLMLIHKASSTVLLGAGYTATVEMILKFMERERMHSSTPGRARWSKANGPS
Ga0318496_103376992	3300031713	Soil	MTGWQTYRNGNPREPWDLERLARHHAAKLGYRVHRSRRRKGPDNASGLMLIHKASSTVLLGAGYTATVEMILKFMERE
Ga0318496_105247531	3300031713	Soil	CWAPDIPNPREIWNLERLARHRAAKLGYRVRRSRRRKGRDNVGEFMLIHKASSTVLLGVGYAANLS
Ga0306917_112884361	3300031719	Soil	MADWQTYRNGNPRRRCDLERLARHRAAKFGYRVHRSRRRKGDDNAGELMLIDKRSSTVLLGAGFTATVEM
Ga0306918_101363683	3300031744	Soil	MSSRVYEPERPDTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS
Ga0306918_111417161	3300031744	Soil	MTTRENEKMTNWQTYRNGNPRAIWNLERLARHRATKLGYRMHRARSRKGRDNAGEFMLIHKASSTVLLGAGYTANPEMILEYMERKRTHAAADHSTHH
Ga0318502_109432261	3300031747	Soil	HRLAKTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS
Ga0318494_105560862	3300031751	Soil	MTGWQTYRNGNPREPWDLERLARHHAAKLGYRVHRSRRRKGPDNASGLMLIHKASSTVLLGAGYTATVEMILK
Ga0307477_111517562	3300031753	Hardwood Forest Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKSRDNAGEFMLIHKASSTVLLGAGY
Ga0318535_104118452	3300031764	Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVRRSRRRKGRDNAGEFMLIHKASSTVPF
Ga0318509_105735212	3300031768	Soil	VNNWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKAS
Ga0318546_107440541	3300031771	Soil	YRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLVGVGYTANLEMILEFVERERIQ
Ga0318547_101838791	3300031781	Soil	YRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKASSTVLLGAGYSANLETILEFIKRERMQ
Ga0318552_102390041	3300031782	Soil	MTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLVGVGYTANLEMILEFVERERIQ
Ga0318552_103004833	3300031782	Soil	MTGWQTYRNGNPRKIWNLDRLARHRAAKLGYRVHRSRRRKSRDNAGEFMLIHKASSTVL
Ga0306925_118417282	3300031890	Soil	MTDWQTYRNGHPREIWDLERLARHHAAKLGYRVHRSRRRKGRDNAGELMLIHKASSTVLLGAGYTAPVEAILNFMAREQRQ
Ga0318520_108746631	3300031897	Soil	NGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGQFMLIHKASSTVLLGAGYSANLETILEFIKRERMQ
Ga0306923_113793201	3300031910	Soil	MRIAFTHRSENILTNEKMTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLVGVGYTANLEMILEFVERERIQ
Ga0306923_125673581	3300031910	Soil	MTDWHTYRNGNRREIWNLERLARHRAAKLGYRVCRSRRRKGRDNAGEFMLLHKASSTVLLGAGFTATLETIL
Ga0306921_100450202	3300031912	Soil	MAARDQTGSHRARLMSSRVYEPERPDTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAAEFMLIHKASSTVLLGVGYAANLS
Ga0306921_109582923	3300031912	Soil	MTTRENEKMTNWQTYRNGNPRSIWNLERLARHRATKLGYRMHRSRSRKGRDNAGEFMLIHKASSTVLLGAGYTANAEMILEYMERKRTHAAADHSTHH
Ga0306921_110768172	3300031912	Soil	IAFTHRSENILTNEKMTDWQTYRNGNPREIWNLERLARHRAAKLGYRVHRSRRRKGRDNAGEFMLIHKASSTVLVGVGYTANLEMILEFVERERIQ
Ga0306921_126949912	3300031912	Soil	MTGWQTYRNGNPRKIWNLDRLARHRAAKLGYRVHRSRRRKSRDNAGEFMLIHKASSTVLL
Ga0306922_115623682	3300032001	Soil	VTGWQTYRNGNPRQPWDSERLARHHAAKLGYRVHRSRRRKGPDDTSGLMLIHKASSTVLLGAGYTATVEMILKFMERSECIQA
Ga0318525_103900451	3300032089	Soil	MTGWQTYRNGNPREPWDLERLARHHAAKLGYRVHRSRRRKGPDNASGLMLIHKASSTVLLGAGYTATVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055078

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences