Metagenome / Metatranscriptome Family F055074

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055074
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	41 residues
Representative Sequence	SVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG
Number of Associated Samples	101
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.84 %
% of genes from short scaffolds (< 2000 bps)	92.81 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.144 % of family members)
Environment Ontology (ENVO)	Unclassified (25.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.799 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.29% β-sheet: 24.29% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF03030	H_PPase	7.91
PF08240	ADH_N	4.32
PF00082	Peptidase_S8	2.88
PF00293	NUDIX	2.16
PF10162	G8	2.16
PF02597	ThiS	2.16
PF13415	Kelch_3	1.44
PF13418	Kelch_4	1.44
PF02391	MoaE	1.44
PF10041	DUF2277	0.72
PF07394	DUF1501	0.72
PF03793	PASTA	0.72
PF04545	Sigma70_r4	0.72
PF01344	Kelch_1	0.72
PF13964	Kelch_6	0.72
PF07676	PD40	0.72
PF02445	NadA	0.72
PF16884	ADH_N_2	0.72
PF02801	Ketoacyl-synt_C	0.72
PF00535	Glycos_transf_2	0.72
PF13602	ADH_zinc_N_2	0.72
PF13574	Reprolysin_2	0.72
PF02423	OCD_Mu_crystall	0.72
PF02909	TetR_C_1	0.72
PF17164	DUF5122	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	7.91
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	2.16
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	2.16
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	1.44
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.72
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.72
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.06 %
Unclassified	root	N/A	30.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.06 %
Unclassified	root	N/A	30.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.06 %
Unclassified	root	N/A	30.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.32 %
Unclassified	root	N/A	30.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.73 %
Unclassified	root	N/A	30.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.16 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.81 %
Unclassified	root	N/A	30.94 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.16 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.44 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	31.65 %
Unclassified	root	N/A	30.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.16 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.72 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.72 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.65 %
Unclassified	root	N/A	30.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.16 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.72 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	0.72 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.65 %
Unclassified	root	N/A	30.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.16 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.72 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	0.72 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.65 %
Unclassified	root	N/A	30.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.16 %
Miltoncostaea marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea marina	0.72 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.72 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig540981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
2170459019\|G14TP7Y02GHRXM	Not Available	545	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c029501	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100808184	Not Available	1040	Open in IMG/M
3300000956\|JGI10216J12902_103503252	Not Available	602	Open in IMG/M
3300004114\|Ga0062593_102853014	Not Available	552	Open in IMG/M
3300005093\|Ga0062594_103072853	Not Available	522	Open in IMG/M
3300005164\|Ga0066815_10006718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1307	Open in IMG/M
3300005164\|Ga0066815_10091462	Not Available	561	Open in IMG/M
3300005168\|Ga0066809_10044775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300005172\|Ga0066683_10193997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300005186\|Ga0066676_10308705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300005329\|Ga0070683_100039054	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300005329\|Ga0070683_100041248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4245	Open in IMG/M
3300005332\|Ga0066388_107488833	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005459\|Ga0068867_101701049	Not Available	591	Open in IMG/M
3300005526\|Ga0073909_10238868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300005535\|Ga0070684_101051308	Not Available	765	Open in IMG/M
3300005558\|Ga0066698_10169540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1483	Open in IMG/M
3300005558\|Ga0066698_10231529	Not Available	1271	Open in IMG/M
3300005564\|Ga0070664_102103791	Not Available	536	Open in IMG/M
3300005713\|Ga0066905_100233879	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005713\|Ga0066905_100685190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300005764\|Ga0066903_100144928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3391	Open in IMG/M
3300005764\|Ga0066903_106979862	Not Available	586	Open in IMG/M
3300006175\|Ga0070712_100277735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300006175\|Ga0070712_101056332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300006358\|Ga0068871_101254316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	696	Open in IMG/M
3300006572\|Ga0074051_11694153	All Organisms → cellular organisms → Bacteria → Terrabacteria group	676	Open in IMG/M
3300006574\|Ga0074056_11658248	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006575\|Ga0074053_11133785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300006575\|Ga0074053_11932178	Not Available	600	Open in IMG/M
3300006576\|Ga0074047_11988975	Not Available	510	Open in IMG/M
3300006580\|Ga0074049_13149681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	937	Open in IMG/M
3300006604\|Ga0074060_11944095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300006845\|Ga0075421_101616804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300006854\|Ga0075425_100550445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328	Open in IMG/M
3300006854\|Ga0075425_101426948	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300006854\|Ga0075425_101696086	Not Available	711	Open in IMG/M
3300006854\|Ga0075425_102817563	Not Available	535	Open in IMG/M
3300006876\|Ga0079217_11014787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300006881\|Ga0068865_100744657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300006894\|Ga0079215_11469074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300006953\|Ga0074063_14174932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300006953\|Ga0074063_14249149	Not Available	930	Open in IMG/M
3300007076\|Ga0075435_100885804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	778	Open in IMG/M
3300007076\|Ga0075435_101309682	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009148\|Ga0105243_10640535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300009162\|Ga0075423_11730953	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010041\|Ga0126312_10366743	Not Available	1022	Open in IMG/M
3300010043\|Ga0126380_11742891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010326\|Ga0134065_10161646	Not Available	789	Open in IMG/M
3300010359\|Ga0126376_13054247	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	517	Open in IMG/M
3300010362\|Ga0126377_12918647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300010364\|Ga0134066_10376354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010373\|Ga0134128_11515874	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300010375\|Ga0105239_12685575	Not Available	581	Open in IMG/M
3300010398\|Ga0126383_11461128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300010400\|Ga0134122_11477391	Not Available	698	Open in IMG/M
3300010403\|Ga0134123_12123967	Not Available	622	Open in IMG/M
3300011107\|Ga0151490_1206805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300012507\|Ga0157342_1064771	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012899\|Ga0157299_10061283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300012902\|Ga0157291_10114787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea marina	754	Open in IMG/M
3300012948\|Ga0126375_10447055	Not Available	948	Open in IMG/M
3300012955\|Ga0164298_10560839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300012958\|Ga0164299_10958589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300012960\|Ga0164301_10895875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300012960\|Ga0164301_11478222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012961\|Ga0164302_11105226	Not Available	626	Open in IMG/M
3300012961\|Ga0164302_11267045	Not Available	594	Open in IMG/M
3300012961\|Ga0164302_11271920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012988\|Ga0164306_11634671	Not Available	557	Open in IMG/M
3300012989\|Ga0164305_10083906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1991	Open in IMG/M
3300012989\|Ga0164305_11508689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300014157\|Ga0134078_10153343	Not Available	908	Open in IMG/M
3300014326\|Ga0157380_10834703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	942	Open in IMG/M
3300014745\|Ga0157377_11062135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300015371\|Ga0132258_10109566	All Organisms → cellular organisms → Bacteria	6531	Open in IMG/M
3300015371\|Ga0132258_11250087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1877	Open in IMG/M
3300015371\|Ga0132258_11363735	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300015371\|Ga0132258_11441414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1739	Open in IMG/M
3300015371\|Ga0132258_11680951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1601	Open in IMG/M
3300015372\|Ga0132256_100043636	Not Available	4132	Open in IMG/M
3300015372\|Ga0132256_101077330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300015372\|Ga0132256_101630741	Not Available	755	Open in IMG/M
3300015373\|Ga0132257_100235239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2183	Open in IMG/M
3300015373\|Ga0132257_100350552	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300015373\|Ga0132257_101717178	Not Available	805	Open in IMG/M
3300015373\|Ga0132257_102994994	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300015374\|Ga0132255_100564976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1678	Open in IMG/M
3300015374\|Ga0132255_100813367	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300015374\|Ga0132255_104049919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300015374\|Ga0132255_104296250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300018031\|Ga0184634_10062642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1564	Open in IMG/M
3300018031\|Ga0184634_10528091	Not Available	524	Open in IMG/M
3300018072\|Ga0184635_10195061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300018073\|Ga0184624_10138508	Not Available	1063	Open in IMG/M
3300018074\|Ga0184640_10055832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1643	Open in IMG/M
3300018077\|Ga0184633_10334390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300018081\|Ga0184625_10628808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018081\|Ga0184625_10655510	Not Available	508	Open in IMG/M
3300019884\|Ga0193741_1010206	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300020016\|Ga0193696_1112813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300021078\|Ga0210381_10032622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1475	Open in IMG/M
3300021080\|Ga0210382_10347431	Not Available	655	Open in IMG/M
3300021510\|Ga0222621_1132258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300022756\|Ga0222622_11315684	Not Available	532	Open in IMG/M
3300022901\|Ga0247788_1026593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300025915\|Ga0207693_10393451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1084	Open in IMG/M
3300025916\|Ga0207663_10531890	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300025920\|Ga0207649_11466341	Not Available	540	Open in IMG/M
3300025937\|Ga0207669_10805943	All Organisms → cellular organisms → Bacteria → Terrabacteria group	779	Open in IMG/M
3300025944\|Ga0207661_10168061	Not Available	1907	Open in IMG/M
3300025944\|Ga0207661_10218503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1683	Open in IMG/M
3300025944\|Ga0207661_10391580	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300025944\|Ga0207661_11639465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300025945\|Ga0207679_10072645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2599	Open in IMG/M
3300025945\|Ga0207679_11397308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300026078\|Ga0207702_10705314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	995	Open in IMG/M
3300026078\|Ga0207702_10949259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300026089\|Ga0207648_10259084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1552	Open in IMG/M
3300026116\|Ga0207674_10214759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1872	Open in IMG/M
3300027560\|Ga0207981_1051365	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027821\|Ga0209811_10050685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1419	Open in IMG/M
3300028708\|Ga0307295_10190953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300028712\|Ga0307285_10070817	Not Available	893	Open in IMG/M
3300028715\|Ga0307313_10214879	Not Available	597	Open in IMG/M
3300028715\|Ga0307313_10215103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300028719\|Ga0307301_10225854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300028720\|Ga0307317_10006784	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300028720\|Ga0307317_10150817	Not Available	780	Open in IMG/M
3300028771\|Ga0307320_10074466	Not Available	1272	Open in IMG/M
3300028784\|Ga0307282_10061181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1697	Open in IMG/M
3300028796\|Ga0307287_10296260	Not Available	612	Open in IMG/M
3300028819\|Ga0307296_10094879	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300028819\|Ga0307296_10343038	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300028824\|Ga0307310_10220806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	901	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.06%
Host-Associated	Host-Associated	30.22%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.43%
Plants	Host-Associated → Plants	30.22%
Aquatic	Environmental → Aquatic	8.63%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.39%
Sediment	Environmental → Aquatic → Sediment	7.19%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Roots	Host-Associated → Plants → Roots	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.92%
Loam	Environmental → Terrestrial → Soil → Loam	11.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.04%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.44%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.44%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.07%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_16401900	2124908045	Soil	SVGRVRRVRARRSLRGRVVSQAPRPGTVKRRGFPVKLAVGR
4MG_01595350	2170459019	Switchgrass, Maize And Mischanthus Litter	VRSRRSLRGRVVKQTPRPGTIKRRNFPVRLKVGRG
ARSoilOldRDRAFT_0295011	3300000044	Arabidopsis Rhizosphere	HCAVGRISRVRSRRSLRGRVVKQTPRPGTIKRRNFPVRLSVGRG*
INPhiseqgaiiFebDRAFT_1008081841	3300000364	Soil	VRSRRSLRGRVVSQNPRPGAIKRRNFPVRLAVGRL*
JGI10216J12902_1035032523	3300000956	Soil	VGQVSRVRSRRSLRGRVVKQTPRPGTIKRRNFPVRLKVGRG*
Ga0062593_1028530141	3300004114	Soil	GRVRKARSRRSLRGRVINQSPRPGSLRRRGFPVKLVVGRR*
Ga0062594_1030728531	3300005093	Soil	AHCSVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRG*
Ga0066815_100067182	3300005164	Soil	AHCSVGRVRRARARRSLVGRVVKQTPRPGTIKRRNFPVALVVGRR*
Ga0066815_100914622	3300005164	Soil	AHCSVGNIRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRS*
Ga0066809_100447753	3300005168	Soil	GRVRGVRSKRALRGRVVAQTPRPGAVRRQGFPVKLLVGRR*
Ga0066683_101939973	3300005172	Soil	HCSLGKVRHVRSRRSLRGRVVSQSPRAGSTRRLNFPVMLAVGRG*
Ga0066676_103087052	3300005186	Soil	CSIGRVSRVRSRRSLYGRVVNQAPRPGAIKRRGFPVKLAVGRP*
Ga0070683_1000390541	3300005329	Corn Rhizosphere	SVGRVTRVRSRRSLRGRVVKQTPRPGTIKRRNFPVRLKVGRG*
Ga0070683_1000412481	3300005329	Corn Rhizosphere	SVGRVRRVRARRSLRGRVVRQSPRPGTIKRRNFPVKLAVGRG*
Ga0066388_1074888331	3300005332	Tropical Forest Soil	CSVGRVRRVRSRRSLRGRVVNQAPRPGTVKRRGFPVSLAVGRG*
Ga0068867_1017010492	3300005459	Miscanthus Rhizosphere	RAHCSVGNVRRVRSRRSLVGRVVSQNPRPGAIKRRNFPVKLAVGRR*
Ga0073909_102388682	3300005526	Surface Soil	AHCSVGNVRRVRSRRSLRGHVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0070684_1010513081	3300005535	Corn Rhizosphere	HCSVGSVRRVISRRSLVGRVVRQSPRPGSIRRRGFPVNLWVGRR*
Ga0066698_101695401	3300005558	Soil	AHCSVGRVRRVRSRRSLWGRVVNQAPRPGAIRRQGFPVKLAVGRS*
Ga0066698_102315291	3300005558	Soil	SVGRVRRARARRSLRGRVVRQTPRPGTIRRRGFPVALVVGRR*
Ga0070664_1021037912	3300005564	Corn Rhizosphere	GQVSRVRSRRSLRGRVVKQTPRPGTIKRQNFPVRLKVGRG*
Ga0066905_1002338791	3300005713	Tropical Forest Soil	RAHCTVGRVSRVRSRRSLRGRVVRQIPRPGTIKRRNFPVRLSVGRG*
Ga0066905_1006851902	3300005713	Tropical Forest Soil	VGRVRRVVSRRSLRGRVVSQSPRPGAVRRRGFPVSLRVGRG*
Ga0066903_1001449285	3300005764	Tropical Forest Soil	GRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0066903_1069798622	3300005764	Tropical Forest Soil	VRARRSLRGRVVSQNPRPGAVKRRNFPVKLAIGRL*
Ga0070712_1002777351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RRARARRSLRGRIVKQTPRPGTIKRRNFPVALVVGR*
Ga0070712_1010563322	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0068871_1012543162	3300006358	Miscanthus Rhizosphere	CSVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLKVGRG*
Ga0074051_116941531	3300006572	Soil	CSVGRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRR*
Ga0074056_116582481	3300006574	Soil	HCSVGNVRRVRSRRSLRGRVVNQSPRPGAIKRRNFPVKLAVGRG*
Ga0074053_111337852	3300006575	Soil	RRARRSLRGRVVNQVPRPGTIRRRGFPVSLAIGRR*
Ga0074053_119321782	3300006575	Soil	RVRARRSLRGRVVNQSPRPGTVKRRNSPVKLAVGRP*
Ga0074047_119889751	3300006576	Soil	CSVGRVRRVRSRRSLRGRVVNQAPRPGTIKRRNFPVKLAVGRG*
Ga0074049_131496811	3300006580	Soil	AAHCSVGQIRRARARRSLRGRVVNQSPRPGTIKRRNFPVRLVVGRR*
Ga0074060_119440952	3300006604	Soil	GRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRR*
Ga0075421_1016168041	3300006845	Populus Rhizosphere	RANCRVGTVRRVRSRRSLRGRVVAQNPRPGAIRRAGFPVNLRVGRG*
Ga0075425_1005504451	3300006854	Populus Rhizosphere	AHCSVGNVRRVRSRRSLRGRVVNQAPRPGTVKRRNFPVKLAVGRG*
Ga0075425_1014269481	3300006854	Populus Rhizosphere	SVGNVRRVRSRRSLRGRVVNQSPRPGTVKRRNFPVKLAIGRR*
Ga0075425_1016960862	3300006854	Populus Rhizosphere	VRSRRSLRGRVVNQNPRPGSIRRRGFPVNLAIGRR*
Ga0075425_1028175632	3300006854	Populus Rhizosphere	RSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRS*
Ga0079217_110147873	3300006876	Agricultural Soil	RVGTVRRVRSRRQLRGRVVGQSPRGGAVRRVGFRVNLRVGRG*
Ga0068865_1007446572	3300006881	Miscanthus Rhizosphere	GNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRS*
Ga0079215_114690741	3300006894	Agricultural Soil	RRCRVGTIRRVRSRRNRIGRVVGQSPRGGAVRRVGFRVNLRVGRR*
Ga0074063_141749322	3300006953	Soil	VGRVRRARARRSLRGRVVNQSPRPGTIKRRNFPVKLVVGRR*
Ga0074063_142491491	3300006953	Soil	NVRRVRSRRSLVGRVVSQNPRPGAIKRRNFPVKLAVGRR*
Ga0075435_1008858041	3300007076	Populus Rhizosphere	NVRRVRSRRSLRGRVVNQSPRPGTVKRRNFPVKLAVGRG*
Ga0075435_1013096821	3300007076	Populus Rhizosphere	RVRSRRSLRGRVVNQAPRPGTVKRRNFPVKLAVGRG*
Ga0105243_106405352	3300009148	Miscanthus Rhizosphere	VRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRL*
Ga0075423_117309532	3300009162	Populus Rhizosphere	RVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRP*
Ga0126312_103667432	3300010041	Serpentine Soil	VGTVRRVRTRRSLRGRVVGQSPRPGAVRRVGFPVNLRVGRG*
Ga0126380_117428912	3300010043	Tropical Forest Soil	AHCSVGRIRRVAARRSLRGRVVNQSPRPGTVKRRGFPVRMAVGR*
Ga0134065_101616462	3300010326	Grasslands Soil	RRVRSRRSLRGRVVNQAPRPGTIKRRGFPVKLAVGRG*
Ga0126376_130542472	3300010359	Tropical Forest Soil	VRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0126377_129186472	3300010362	Tropical Forest Soil	VGRIRRVAARRSLRGRVVNQSPRPGTVKRRGFPVKMAVGR*
Ga0134066_103763542	3300010364	Grasslands Soil	VRSRRSLRGRVVNQAPRPGTIKRRGFPVKLAVGRG*
Ga0134128_115158741	3300010373	Terrestrial Soil	RAHCSVGSVRRGLSRRSLVGRVVKQTPGPGALRRRGFPVNLVVGRR*
Ga0105239_126855752	3300010375	Corn Rhizosphere	IRRVRSKHSLRGRVVKQSPRPGTIKRRNFPVSLALGRG*
Ga0126383_114611282	3300010398	Tropical Forest Soil	CSVGNVRRVRSRRSLRGRVVSQKPRPGSVKRRNFPVKLAIGRS*
Ga0134122_114773911	3300010400	Terrestrial Soil	HCSVGNVRRVRSRRSLVGRVVSQNPRPGAIKRRNFPVKLAVGRR*
Ga0134123_121239671	3300010403	Terrestrial Soil	CSVGNVRRVRSRRSLVGRVVSQNPRPGAIKRRNFPVKLAVGRR*
Ga0151490_12068051	3300011107	Soil	AHCSVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRS*
Ga0157342_10647711	3300012507	Arabidopsis Rhizosphere	RRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRS*
Ga0157299_100612831	3300012899	Soil	VRSRRTLRGRVVSQSPRVGAIKRRNFPVSLAVGRG*
Ga0157291_101147872	3300012902	Soil	VGRVRRVRSRRALRSRVVGQSPRAGAIKRRGFPVSLLVGRG*
Ga0126375_104470551	3300012948	Tropical Forest Soil	HCTVGRVRRQRSRRQLVGRVVKQTPRAGALKRRGFPVALVVGRR*
Ga0164298_105608392	3300012955	Soil	GQVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRG*
Ga0164299_109585892	3300012958	Soil	HCSVGRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRL*
Ga0164301_108958751	3300012960	Soil	HCSVGRVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0164301_114782221	3300012960	Soil	HCSVGNVRRVRSRRSLRGHVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0164302_111052262	3300012961	Soil	RVRRARARRSLVGRVVKQTPRPGTIKRRNFPVALVVGRR*
Ga0164302_112670452	3300012961	Soil	SVGQVRRVRSKRSLRGRVVNQSPRPGAVRRVNFPVKLAVGRG*
Ga0164302_112719201	3300012961	Soil	VGQVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0164307_107862281	3300012987	Soil	HCSVGRIRRAHARRSLRGRVVNQSPRPGTIKRRNFPVKLVVGRR*
Ga0164306_116346711	3300012988	Soil	VRSRRSLRGRVVNQSPPPGTVKRRNFPVKLAVGRG*
Ga0164305_100839063	3300012989	Soil	VGNVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRS*
Ga0164305_115086891	3300012989	Soil	GNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRP*
Ga0134078_101533432	3300014157	Grasslands Soil	GRVRRVGARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0157380_108347031	3300014326	Switchgrass Rhizosphere	RAAHCSVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRL*
Ga0157377_110621353	3300014745	Miscanthus Rhizosphere	SVGNVRRVRSRRSLSGRVVSQSPRPSALRRRGFPVELAVGRR*
Ga0132258_101095663	3300015371	Arabidopsis Rhizosphere	RRVRARRSLRGRVVNQSPRPGTVKRRNFPVKLAIGRR*
Ga0132258_112500871	3300015371	Arabidopsis Rhizosphere	NVRRVRSRRSLRGRVVNQNPRPGTVKRRNFPVKLAVGRG*
Ga0132258_113637352	3300015371	Arabidopsis Rhizosphere	CSVGNVRRVRSRRSLRGRVVSQNPRPGVIKRRNFPVKLAIGRS*
Ga0132258_114414141	3300015371	Arabidopsis Rhizosphere	TRVRSRRSLRGRVVKQTPRAGTVKRRNFPVALKVGRS*
Ga0132258_116809513	3300015371	Arabidopsis Rhizosphere	HCSVGRVTRVRSRRSLRGRVVKQTPRPGTIKRRNFPVALKVGRG*
Ga0132256_1000436362	3300015372	Arabidopsis Rhizosphere	VGRIRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0132256_1010773302	3300015372	Arabidopsis Rhizosphere	SVGRIRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0132256_1016307411	3300015372	Arabidopsis Rhizosphere	GTVRRVRTRRSLRGRVVGQNPRPGAIRARGFHVNLRVGRR*
Ga0132257_1002352392	3300015373	Arabidopsis Rhizosphere	IRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR*
Ga0132257_1003505524	3300015373	Arabidopsis Rhizosphere	VGHVRRVRSRRSLRGRVVSQNPRPGVIKRRNFPVKLAIGRS*
Ga0132257_1017171782	3300015373	Arabidopsis Rhizosphere	CSVGRVRRVRARRSLRGRVVNQSPRPGTVKRRNFPVKLAIGRR*
Ga0132257_1029949942	3300015373	Arabidopsis Rhizosphere	VGNVRRVRSRRSLRGRVVNQNPRPGTVKRRNFPVKLAVGRG*
Ga0132255_1005649761	3300015374	Arabidopsis Rhizosphere	AHCSVGKVRRVRARRSLCGRVVSQSPKPRVVKRRNFPVKLAIGRR*
Ga0132255_1008133673	3300015374	Arabidopsis Rhizosphere	AHCAVGRVRRARARRSLVGRVVKQTPRPGTIKRRNFPVALVVGRR*
Ga0132255_1040499191	3300015374	Arabidopsis Rhizosphere	RRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG*
Ga0132255_1042962502	3300015374	Arabidopsis Rhizosphere	GRVTRVRSRRSLRGRVVKQTPRPGTIKRRNFPVKLKVGRG*
Ga0184634_100626423	3300018031	Groundwater Sediment	VGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRG
Ga0184634_105280911	3300018031	Groundwater Sediment	AHCTVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRR
Ga0184635_101950611	3300018072	Groundwater Sediment	HCSVGRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRR
Ga0184624_101385082	3300018073	Groundwater Sediment	RRVRARRSLRGRVVSQNPRPGAIKRRNFPVKLAIGRR
Ga0184640_100558321	3300018074	Groundwater Sediment	VGNVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRP
Ga0184633_103343902	3300018077	Groundwater Sediment	AAHCSVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRL
Ga0184625_106288081	3300018081	Groundwater Sediment	RRAHCSVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRG
Ga0184625_106555101	3300018081	Groundwater Sediment	VRRVRARRSLRGRVVNQAPRPGTIRRRGFPVNLAVGRR
Ga0193741_10102064	3300019884	Soil	KVRKRRCSVGRVRRIRVRRSLRGKVIGQSLRAGTVKRRNVPVKLSVGSR
Ga0193696_11128131	3300020016	Soil	RVRSRRSLRGRVVNQAPRPGTIKRRNFPVKLAVGRS
Ga0210381_100326221	3300021078	Groundwater Sediment	VRSRRSLRGRVVNQSPRPGTIKRQNFPVKLAVGRV
Ga0210382_103474311	3300021080	Groundwater Sediment	AAHCSVGRVRRVRSRRSLRGRVVKQSPRPGTIKRRNFPVKLAVGRS
Ga0222621_11322581	3300021510	Groundwater Sediment	HCSVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRL
Ga0222622_113156841	3300022756	Groundwater Sediment	VRARRSLRGRVVHQSPRPGTIKRRNFPVKLAIGRR
Ga0247788_10265932	3300022901	Soil	CSVGRVRHVRSRRTLRGRVVSQSPRVGAIKRRNFPVSLAVGRG
Ga0207693_103934512	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRP
Ga0207663_105318903	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SVGRVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR
Ga0207649_114663412	3300025920	Corn Rhizosphere	AAHCSVGRVRHVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRS
Ga0207669_108059431	3300025937	Miscanthus Rhizosphere	SVGNVRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVRLAVGRG
Ga0207661_101680612	3300025944	Corn Rhizosphere	HCSVGRVRRVRARRSLRGRVVRQSPRPGTIKRRNFPVKLAVGRG
Ga0207661_102185033	3300025944	Corn Rhizosphere	SVGRVTRVRSRRSLRGRVVKQTPRPGTIKRRNFPVRLKVGRG
Ga0207661_103915801	3300025944	Corn Rhizosphere	VRRVRSRRSLRGRVVNQSPRPGTVKRRNFPVKLAVGRG
Ga0207661_116394651	3300025944	Corn Rhizosphere	RVRRVRSRRSLYGRVVNQSPRPRTVKRRGFPVKLAVGRR
Ga0207679_100726451	3300025945	Corn Rhizosphere	VRSRRSLRGRVVKQTPRPGTIKRQNFPVRLKVGRG
Ga0207679_113973082	3300025945	Corn Rhizosphere	VGNVRRVRSRRSLRGRVVNQTPRPGTIKRRNFPVKLAVGRG
Ga0207702_107053141	3300026078	Corn Rhizosphere	RVRARRSLRGRVVHQSPRPGTIKRRNFPVKLAVGRG
Ga0207702_109492592	3300026078	Corn Rhizosphere	RRAHCSVGKVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAIGRR
Ga0207648_102590841	3300026089	Miscanthus Rhizosphere	HCSVGNVRRVRSRRSLVGRVVSQNPRPGAIKRRNFPVKLAVGRR
Ga0207674_102147591	3300026116	Corn Rhizosphere	VRARRSLRGRVVRQSPRPGTIKRRNFPVKLAVGRG
Ga0207981_10513651	3300027560	Soil	HCSVGNVRRVRSRRSLRGRVVNQTPRPGTIKRRNFPVKLGVGRG
Ga0209811_100506851	3300027821	Surface Soil	GNIRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRS
Ga0307295_101909531	3300028708	Soil	RAHCSVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRG
Ga0307285_100708171	3300028712	Soil	RRAHCSVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAIGRR
Ga0307313_102148791	3300028715	Soil	AHCSVGNVRRVRARRSLRGRVVKQSPRPGTVKRRNFPVKLAIGRR
Ga0307313_102151031	3300028715	Soil	VRRVRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG
Ga0307301_102258543	3300028719	Soil	RRAHCTVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRG
Ga0307317_100067846	3300028720	Soil	VRSRRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRG
Ga0307317_101508172	3300028720	Soil	SVGRVRRVRSRRSLRGRVVKQSPRPGTIKRRNFPVKLAVGRS
Ga0307320_100744662	3300028771	Soil	RVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAIGRR
Ga0307282_100611811	3300028784	Soil	RVRRVRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRR
Ga0307287_102962601	3300028796	Soil	CSVGNVRRVRSRRSLRGRVVSQNPRPGTIKRRNFPVKLAVGRR
Ga0307296_100948791	3300028819	Soil	RVRARRSLRGRVVHQSPRPGTIKRRNFPVKLAIGRR
Ga0307296_103430382	3300028819	Soil	VRARRSLRGRVVNQSPRPGTIKRRNFPVKLAVGRR
Ga0307310_102208061	3300028824	Soil	VGRVRRVRARRSLRGRVVNQSPRPATIKRRNFPVKLAVGRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055074

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences