Metagenome / Metatranscriptome Family F055057

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	58 residues
Representative Sequence	FDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG
Number of Associated Samples	118
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.39 %
% of genes near scaffold ends (potentially truncated)	87.77 %
% of genes from short scaffolds (< 2000 bps)	92.09 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.691 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.604 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.88% β-sheet: 9.30% Coil/Unstructured: 55.81%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF05231	MASE1	11.51
PF00890	FAD_binding_2	7.91
PF13466	STAS_2	5.04
PF13185	GAF_2	2.88
PF13193	AMP-binding_C	2.16
PF01163	RIO1	1.44
PF13683	rve_3	1.44
PF01544	CorA	1.44
PF00561	Abhydrolase_1	0.72
PF07366	SnoaL	0.72
PF13492	GAF_3	0.72
PF13622	4HBT_3	0.72
PF06197	DUF998	0.72
PF00296	Bac_luciferase	0.72
PF01408	GFO_IDH_MocA	0.72
PF04978	DUF664	0.72
PF00589	Phage_integrase	0.72
PF12728	HTH_17	0.72
PF00211	Guanylate_cyc	0.72
PF08450	SGL	0.72
PF07045	DUF1330	0.72
PF09084	NMT1	0.72
PF03572	Peptidase_S41	0.72
PF00578	AhpC-TSA	0.72
PF00440	TetR_N	0.72
PF00583	Acetyltransf_1	0.72
PF14685	Tricorn_PDZ	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	11.51
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	11.51
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	11.51
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.44
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.72
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.72
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.72
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.86 %
Unclassified	root	N/A	9.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.14 %
Unclassified	root	N/A	9.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.54 %
Unclassified	root	N/A	9.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	61.87 %
Unclassified	root	N/A	9.35 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.16 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.87 %
Unclassified	root	N/A	9.35 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.16 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.44 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.87 %
Unclassified	root	N/A	9.35 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.16 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.44 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.72 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.87 %
Unclassified	root	N/A	9.35 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.16 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.44 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.72 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12837172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005167\|Ga0066672_10992829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300005184\|Ga0066671_10382311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300005332\|Ga0066388_100076094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3696	Open in IMG/M
3300005439\|Ga0070711_100426461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300005468\|Ga0070707_100169724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2126	Open in IMG/M
3300005539\|Ga0068853_100015095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6350	Open in IMG/M
3300005764\|Ga0066903_103790863	Not Available	812	Open in IMG/M
3300005764\|Ga0066903_104655102	Not Available	731	Open in IMG/M
3300005898\|Ga0075276_10044004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300005900\|Ga0075272_1057607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300006175\|Ga0070712_100942214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300006175\|Ga0070712_101772503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300006358\|Ga0068871_100148977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1994	Open in IMG/M
3300009038\|Ga0099829_11282835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300009137\|Ga0066709_101092533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300009176\|Ga0105242_11485656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300009551\|Ga0105238_11291223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300009698\|Ga0116216_10235274	Not Available	1120	Open in IMG/M
3300009700\|Ga0116217_10658873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300010048\|Ga0126373_13297154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300010154\|Ga0127503_10625828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010154\|Ga0127503_10799574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300010159\|Ga0099796_10318183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300010358\|Ga0126370_10426114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300010361\|Ga0126378_12126041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300010379\|Ga0136449_100110826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5572	Open in IMG/M
3300010379\|Ga0136449_100901940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1440	Open in IMG/M
3300010379\|Ga0136449_101245896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1166	Open in IMG/M
3300010868\|Ga0124844_1043003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1540	Open in IMG/M
3300011270\|Ga0137391_11172670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012096\|Ga0137389_11191771	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300012205\|Ga0137362_11325261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300012209\|Ga0137379_10493420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1133	Open in IMG/M
3300012209\|Ga0137379_10884948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300012357\|Ga0137384_10427543	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012357\|Ga0137384_10431885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300012362\|Ga0137361_11274114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300012917\|Ga0137395_10426737	Not Available	951	Open in IMG/M
3300012917\|Ga0137395_10552435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300012951\|Ga0164300_10437231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300012957\|Ga0164303_10816951	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012958\|Ga0164299_10040310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2108	Open in IMG/M
3300012984\|Ga0164309_11611295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300012987\|Ga0164307_11574697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300013307\|Ga0157372_10679094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1199	Open in IMG/M
3300014838\|Ga0182030_10638681	Not Available	1015	Open in IMG/M
3300015264\|Ga0137403_10665949	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300015374\|Ga0132255_100531755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1731	Open in IMG/M
3300016270\|Ga0182036_10789980	Not Available	773	Open in IMG/M
3300016341\|Ga0182035_11565335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	594	Open in IMG/M
3300016357\|Ga0182032_10439690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300016357\|Ga0182032_10861319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300016371\|Ga0182034_10412309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300016387\|Ga0182040_10511149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300016445\|Ga0182038_11996218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300017924\|Ga0187820_1092870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300017961\|Ga0187778_10039049	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300017972\|Ga0187781_11083903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300017975\|Ga0187782_11606803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300018001\|Ga0187815_10348047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300018007\|Ga0187805_10216995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300018058\|Ga0187766_10049048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2479	Open in IMG/M
3300018060\|Ga0187765_10737864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300018085\|Ga0187772_11433417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300020579\|Ga0210407_11239402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300020581\|Ga0210399_10157511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1879	Open in IMG/M
3300021170\|Ga0210400_10500836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300021181\|Ga0210388_10619174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300021401\|Ga0210393_10730119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300021402\|Ga0210385_11094796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300021404\|Ga0210389_10298897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300021405\|Ga0210387_10285899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1449	Open in IMG/M
3300021407\|Ga0210383_11104527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300021474\|Ga0210390_10327612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300022528\|Ga0242669_1096468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300022715\|Ga0242678_1057154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300025922\|Ga0207646_11557631	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300025929\|Ga0207664_10871094	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300026118\|Ga0207675_102045274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300026335\|Ga0209804_1278679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300027512\|Ga0209179_1066401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300027680\|Ga0207826_1061247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300027775\|Ga0209177_10413285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300027889\|Ga0209380_10827179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300030580\|Ga0311355_10267345	Not Available	1739	Open in IMG/M
3300030617\|Ga0311356_10601728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300030738\|Ga0265462_11225597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300030741\|Ga0265459_10975885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300031022\|Ga0138301_1449202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300031027\|Ga0302308_10530945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300031128\|Ga0170823_13893031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300031231\|Ga0170824_104482124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	646	Open in IMG/M
3300031546\|Ga0318538_10409470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300031549\|Ga0318571_10396445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300031564\|Ga0318573_10171854	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300031564\|Ga0318573_10729602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300031681\|Ga0318572_10263902	Not Available	1014	Open in IMG/M
3300031681\|Ga0318572_10889325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300031708\|Ga0310686_108502386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2904	Open in IMG/M
3300031708\|Ga0310686_110426423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300031723\|Ga0318493_10211061	Not Available	1027	Open in IMG/M
3300031736\|Ga0318501_10159415	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300031736\|Ga0318501_10367209	Not Available	775	Open in IMG/M
3300031744\|Ga0306918_10310812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300031768\|Ga0318509_10162429	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300031771\|Ga0318546_11152321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300031771\|Ga0318546_11177720	Not Available	538	Open in IMG/M
3300031777\|Ga0318543_10273178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300031781\|Ga0318547_10626934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300031798\|Ga0318523_10330188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300031819\|Ga0318568_10033520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2886	Open in IMG/M
3300031835\|Ga0318517_10249381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300031860\|Ga0318495_10092934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M
3300031890\|Ga0306925_10246103	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300031896\|Ga0318551_10711591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300031896\|Ga0318551_10854617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031897\|Ga0318520_10064267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1971	Open in IMG/M
3300031897\|Ga0318520_10635991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300031941\|Ga0310912_11391595	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031942\|Ga0310916_10548674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300031942\|Ga0310916_10628095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912	Open in IMG/M
3300032001\|Ga0306922_10902931	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300032001\|Ga0306922_12100334	Not Available	547	Open in IMG/M
3300032025\|Ga0318507_10244362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300032025\|Ga0318507_10319812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300032039\|Ga0318559_10594355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300032044\|Ga0318558_10166599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300032055\|Ga0318575_10616553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300032059\|Ga0318533_11155724	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300032063\|Ga0318504_10507630	Not Available	578	Open in IMG/M
3300032063\|Ga0318504_10661503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300032094\|Ga0318540_10576088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300032515\|Ga0348332_11549703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300032892\|Ga0335081_10265834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2302	Open in IMG/M
3300032955\|Ga0335076_10077538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3264	Open in IMG/M
3300033289\|Ga0310914_10327051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1385	Open in IMG/M
3300033289\|Ga0310914_11341571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300033808\|Ga0314867_036847	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.96%
Host-Associated	Host-Associated	5.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.37%
Plants	Host-Associated → Plants	5.04%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.49%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Peat	Environmental → Terrestrial → Peat	2.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.63%
Loam	Environmental → Terrestrial → Soil → Loam	8.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.16%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.16%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.16%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.44%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_128371721	3300000789	Soil	WGILFDPLESVWVAVHGKXTLVAASSPQALGERMEAATRGETGPDEGEQTQTWRALRRHRKG*
Ga0066672_109928291	3300005167	Soil	LFDPLESVWIAVRGKRTLVAASSPEKLTEQVEATARGEAGPDESDKTQTWRALRKHGRG*
Ga0066671_103823111	3300005184	Soil	GILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGARTQTWRALRKHGRG*
Ga0066388_1000760943	3300005332	Tropical Forest Soil	FDPLESMWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPHEGDKTETWRALRNQERG*
Ga0070711_1004264613	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGARTQTWRALRKHGRG*
Ga0070707_1001697242	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEDDKTERWRALRKHERG*
Ga0068853_1000150951	3300005539	Corn Rhizosphere	SVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHRRG*
Ga0066903_1037908632	3300005764	Tropical Forest Soil	LFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGETGPVEGDKTETWRALRKHKRG*
Ga0066903_1046551022	3300005764	Tropical Forest Soil	LFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGESGPVEGEKTETWRALRKHRPG*
Ga0075276_100440042	3300005898	Rice Paddy Soil	FDPLESVWVAVRGKGTLVAASSPERLTEQVEAAARGEAGLDEGDRTQTWRTHRRRGRG*
Ga0075272_10576071	3300005900	Rice Paddy Soil	DPLESMWVAVRGKRTLVAASSPEMLGERVEAVARGEDTPEEGEKTQTWRTLRRQPGG*
Ga0070712_1009422143	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGLDEGDKTQTWRALRKHRRG*
Ga0070712_1017725031	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG*
Ga0068871_1001489771	3300006358	Miscanthus Rhizosphere	WVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHRRG*
Ga0099829_112828351	3300009038	Vadose Zone Soil	MWVAVRGKRTLVAASSPEKLTEQVEAVAQGETGPQEGDKTQTWRALRRHERG*
Ga0066709_1010925332	3300009137	Grasslands Soil	FDPLESMWVAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGEKTQGWRALHKHERG*
Ga0105242_114856561	3300009176	Miscanthus Rhizosphere	MFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGLDEGDKTQTWRALRKHRR
Ga0105238_112912231	3300009551	Corn Rhizosphere	LESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGLDEGDKTQTWRALRKHRRG*
Ga0116216_102352742	3300009698	Peatlands Soil	FDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG*
Ga0116217_106588731	3300009700	Peatlands Soil	LFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG*
Ga0126373_132971541	3300010048	Tropical Forest Soil	RARFPRWGILFDPLESMWVAVSGKRTLVAASSPEKLTEQVEAAARGEPGPAEGDKTRTWRALRRYAQG*
Ga0127503_106258282	3300010154	Soil	MESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQAWRTLRKH*
Ga0127503_107995741	3300010154	Soil	SVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKQRRG*
Ga0099796_103181831	3300010159	Vadose Zone Soil	MFDPVERVWVAVRGKRTLVAASSPEKLTEQVEAAVRGEAGPDEGDKTQAWRALHCAVHSGAVLRQ
Ga0126370_104261142	3300010358	Tropical Forest Soil	MFDPVARIWVAVRGKRTLVAASSPEKLSEQVEAAARGEAGPAEGDKTQAWRALHQHERDQ
Ga0126378_121260412	3300010361	Tropical Forest Soil	AVRGRRTLVAASSPEKLTEQMEAAIRGETGPDEGAKTQTWRALRKYAQG*
Ga0136449_1001108268	3300010379	Peatlands Soil	MWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQGWRALRKHGRG
Ga0136449_1009019402	3300010379	Peatlands Soil	VAVRGKRTLVAASSPEKLTEQVEAAARDEAGPDEGDKTRAWRALRKHRRG*
Ga0136449_1012458962	3300010379	Peatlands Soil	DPLESMWVAVSGKRTLVAASSPQKLTEQVEAANRGEAGPAEGDKTRTWRALRKYAGS*
Ga0124844_10430031	3300010868	Tropical Forest Soil	SIWVAVSGKKTLVAASTPETLTQRVEAAARGEAGHDEGEKTQAWRALRKPASGLPKIP*
Ga0137391_111726702	3300011270	Vadose Zone Soil	VRIAVRGKRTLVAASSPQKLTEQVEAVAQGETGPQEGDKTQTWRALRRHERG*
Ga0137389_111917712	3300012096	Vadose Zone Soil	FPRWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRVLRKHGRG*
Ga0137362_113252611	3300012205	Vadose Zone Soil	VGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEATARGEAGPDESDKTQTWRALRKHGRG*
Ga0137379_104934203	3300012209	Vadose Zone Soil	GILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTRTWRALRKHGRG*
Ga0137379_108849482	3300012209	Vadose Zone Soil	LFDPLESVWVAVCGKRTLVAASSPEKLTEQVEAAARGEVGPDEGARTQTWRALRQHGRG*
Ga0137384_104275431	3300012357	Vadose Zone Soil	AVRGKRTLVAASSPEKLTEQVEAAGRGEPGPDEGDRTQTWRARRKHRQD*
Ga0137384_104318853	3300012357	Vadose Zone Soil	VFDPLESMWVAVRGKRMLVAASSPEKLTEQVEAATRGEAGPGEGDKTQRWRALR
Ga0137361_112741142	3300012362	Vadose Zone Soil	RARFLRWGILFDPLESVWVAVRGKRTLVAASTPETLTERVEAATRGQAAPDEGEKTQTWRARRRRMRT*
Ga0137395_104267373	3300012917	Vadose Zone Soil	PRWGILFDPLERVWVAVRGKRTLVAASTPETLTERVEAATRGQAAPDEGEKTQTWRARRRRTRT*
Ga0137395_105524351	3300012917	Vadose Zone Soil	VWVAVRGKRTIVAASSPEKLTEQVEAAARGKAGPDEGDKTQTWRALRKHGRG*
Ga0164300_104372312	3300012951	Soil	MFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHRRG*
Ga0164303_108169512	3300012957	Soil	VAVRGKRTLVAASSPEKLTEHVEAATRGETGLDEGDKTQTWRALRKHRRG*
Ga0164299_100403101	3300012958	Soil	RFPRWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHRRG*
Ga0164309_116112951	3300012984	Soil	PRWGILFDPLDSVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGARTQTWRALRKHGRG*
Ga0164307_115746972	3300012987	Soil	GIMFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAATRGETGLDEGDKTQTWRALRKHRRG*
Ga0157372_106790942	3300013307	Corn Rhizosphere	DPLESVWVAVRGKRTLVAASSPEKLTEQVEAATRGETGLDEGDKTQTWRALRKHRRG*
Ga0182030_106386812	3300014838	Bog	VAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQAWRALRKHGRG*
Ga0137403_106659492	3300015264	Vadose Zone Soil	FDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRARRKHRRD*
Ga0132255_1005317551	3300015374	Arabidopsis Rhizosphere	SVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGARTQTWRALRTHGRG*
Ga0182036_107899802	3300016270	Soil	AVRGKRTLVAASSPEKLTEQVEAAARGEAGPVEGDKTQTWRALRKQGHA
Ga0182035_115653352	3300016341	Soil	FDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRRHGRS
Ga0182032_104396902	3300016357	Soil	ESVWVAVRGRRTLVAASSPEKLSEQVEAVSRGEAGPVEGDKTQTWRALRKYAQG
Ga0182032_108613192	3300016357	Soil	FDPLESVWIAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTQAWRARRKHERG
Ga0182034_104123091	3300016371	Soil	FPRWGILFDPMESVWVAVRGRRTLVAASSPEKLTEQMEAAARGETGPDEGAKTQTWRALRKYAQG
Ga0182040_105111491	3300016387	Soil	MESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPSEGDKTQTLRALRKYAQG
Ga0182038_119962181	3300016445	Soil	VWVAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTQAWRARRRHERD
Ga0187820_10928701	3300017924	Freshwater Sediment	RFPRWGILFDPLESVWIAVRGRGTLVAASSPEKLTEQVEAAARGETGPDEGDKTRTWRALRRHERG
Ga0187778_100390494	3300017961	Tropical Peatland	RFPRWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQAWRALRKHGRG
Ga0187781_110839031	3300017972	Tropical Peatland	RDRFPGWGILFDPLESVWVAVLGKRTLVAASSPQALGERMEAATRGETGPDEGEKTQAWRALRRHRKG
Ga0187782_116068031	3300017975	Tropical Peatland	WGILFDPLESMWVAVRGKRTLVASSPEKLTEQVEAAARGEAGPAEGEKTRAWRALRRHER
Ga0187815_103480472	3300018001	Freshwater Sediment	ARFPRWGILFDPLESMWVAVRGKRTLVASSPEKLTEQVEAAARGEAGPDEGEKTQRWRALRKHERG
Ga0187805_102169952	3300018007	Freshwater Sediment	ARFPRWGILFDPLESMWVAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGEKTQRWRALRKQERR
Ga0187766_100490482	3300018058	Tropical Peatland	DPLESVWVAVRGKRTLVAASSPEKLTEQMEAATRGEAGPDEGDQTRTWRALRKHERG
Ga0187765_107378642	3300018060	Tropical Peatland	ARFPRWGILFDPLESMWVAVSGKRTMVAASSPQKLTEQVEAADRGEAGPPEGDKTRTWRALRKYAGG
Ga0187772_114334172	3300018085	Tropical Peatland	PRWGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTQTWRALRKHRRS
Ga0210407_112394022	3300020579	Soil	LFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGARTQTWRTLRKHGRG
Ga0210399_101575111	3300020581	Soil	ARFPRWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG
Ga0210400_105008362	3300021170	Soil	FDPVERVWVAVRGKRTLVAASSPEKLTEQVEAAVRGEAGPDEGDKTQAWRALHKHKRG
Ga0210388_106191742	3300021181	Soil	MRVAARGQRTMAAASRPVKLTGPVEAAARDEAGPDEGDKPQTWRALRKHGPG
Ga0210393_107301192	3300021401	Soil	FPRWGIMFDPVERVWVAVRGKRTLVAASSPEKLTEQVEAAVRGEAGPDEGDKTQAWRALHTRKRG
Ga0210385_110947962	3300021402	Soil	WGILFDPLESVWVAVRGKRTLVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHER
Ga0210389_102988971	3300021404	Soil	MRVAVRGQRTIAAAGRPEKLTGQVEAAARREAGPDEGDKTQTRRALRKHGPG
Ga0210387_102858992	3300021405	Soil	MRVAVRGQRTMAAASRPVKLTGPVEAAARDEAGPDEGDKTQTWRALRKHGPG
Ga0210383_111045272	3300021407	Soil	ESMWVAVRGKRTLVASSPEKLTEQVEAATRGEAGPDEGEKTQGWRTLRKHERG
Ga0210390_103276122	3300021474	Soil	VAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQAWRALHKHKRG
Ga0242669_10964681	3300022528	Soil	MFDPVERVWVAVRGKRTLVAASSPEKLTEQVEAAVRGEAGPDEGDKTQAWRALHTRKRG
Ga0242678_10571542	3300022715	Soil	MFDPVERVWVAVRGKRTLVAASSPEKLTEQVEAAVRGEAGPDEGDKTQAWRALHKHKRG
Ga0207646_115576312	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAAARGEAGLDEGDKTQTWRALRKHRRG
Ga0207664_108710942	3300025929	Agricultural Soil	WGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAATRGEAAPDEGDKTQTWRALRKHRRG
Ga0207675_1020452741	3300026118	Switchgrass Rhizosphere	ARFPRWGILFDPLESVWVAVRGKRTLVAASSPEKLTEQVEAATRGETGLDEGDKTQTWRALRKHRRG
Ga0209804_12786792	3300026335	Soil	FDPLESMWVAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGEKTQGWRALHKHERG
Ga0209179_10664012	3300027512	Vadose Zone Soil	FDPLESVWIAVRGKRTLVAASSPEKLTEQVEATARGEAGPDEGARTQTWRALRKHGRG
Ga0207826_10612471	3300027680	Tropical Forest Soil	ILFDPMESVWIAVRGRRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTQTWRALRKHERG
Ga0209177_104132851	3300027775	Agricultural Soil	ESVWVAVHGKRTLVAASSPQALGERMEAATRGETGPDEGEQTQTWRALRRHHKG
Ga0209380_108271791	3300027889	Soil	RFPRWGILFDPLESVWVAVRGKRTLVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHERG
Ga0311355_102673452	3300030580	Palsa	SMWVAVRGKRTIVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHERG
Ga0311356_106017281	3300030617	Palsa	PLESVWVAVRGKRTIVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHERG
Ga0265462_112255972	3300030738	Soil	WGILFDPLESMWVAVRGKRTLVASSPEKLTEQVEAATRGEAGPAEGEKTQKWRALRKHER
Ga0265459_109758852	3300030741	Soil	MWVAVRGKRTIVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHERG
Ga0138301_14492022	3300031022	Soil	AVRGKRTLVAASSPEKLTEQVEATARGEAGPDEGDKTQTWRALRKHGRG
Ga0302308_105309452	3300031027	Palsa	FDPLESMWVAVRGKRTIVASSPEKLTEQVEAATRGESGPDEGEKTQKWRALRKHERG
Ga0170823_138930313	3300031128	Forest Soil	FDPLESMWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTRTWRALRKHGPG
Ga0170824_1044821241	3300031231	Forest Soil	RWGIVFDPLESMWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHRRG
Ga0318538_104094701	3300031546	Soil	MESVWIAVRGRRTLVAASSPEKLTEQVEAVTRGEAGPVEGDKTQTWRALRKHQRG
Ga0318571_103964451	3300031549	Soil	VWVAVRGKRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTQAWRARRKHERG
Ga0318573_101718543	3300031564	Soil	PLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGESGPDEGDKTQTWRALRKHKRG
Ga0318573_107296021	3300031564	Soil	ILFDPMESVWIAVRGRRTLVAASSPEKLTEQVEAVTRGEAGPVEGDKTQTWRALRKHQRG
Ga0318572_102639021	3300031681	Soil	VWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPVEGDKTQTWRALRKQGHA
Ga0318572_108893251	3300031681	Soil	GILFDPMESVWVAVRGRRTLVAASSPEKLSEQVEAVSRGEAGPVEGDKTQTWRALRKYAQ
Ga0310686_1085023862	3300031708	Soil	WGILFDPLESMWVAVSGKRTLVAASSPQKLTEQVEAANRGEAGPAEGDKTRTWRALRKYAGS
Ga0310686_1104264232	3300031708	Soil	IAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGPG
Ga0318493_102110611	3300031723	Soil	ILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGAKTETWRALRKQRRG
Ga0318501_101594153	3300031736	Soil	VWVAVRGKRTLVAASSPEKLTEQVEAAARGESGPDEGDKTQTWRALRKHKRG
Ga0318501_103672092	3300031736	Soil	PRWGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTETWRALRKHKRG
Ga0306918_103108121	3300031744	Soil	ILFDPMESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPTEGDKTQTWRALRKYAQG
Ga0318509_101624292	3300031768	Soil	RFPRWGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTETWRALRKHKRG
Ga0318546_111523211	3300031771	Soil	ILFDPMESVWVAVRGRRTLVAASSPEKLSEQVEAVSRGEAGPVEGDKTQTWRALRKYAQG
Ga0318546_111777201	3300031771	Soil	FPRWGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTETWRALRKHKRG
Ga0318543_102731782	3300031777	Soil	ILFDPLESVWIAVRGRRTLVAASSPEKLTEQMEAATRGEAGPDEGDKTQTWRALRRHERG
Ga0318547_106269341	3300031781	Soil	ESMWVAVSGKRTLVAASSPQKLTEQVEAATRGEAGPAEGDKTRTWRALRKYAGG
Ga0318523_103301882	3300031798	Soil	RFPRWGILFDPMESVWVAVRGRRTLVAASSPEKLSEQVEAVSRGEAGPVEGDKTQTWRALRKYAQG
Ga0318568_100335204	3300031819	Soil	SVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTETWRALRKHKRG
Ga0318517_102493812	3300031835	Soil	PMESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPTEGDKTQTWRALRKYAQG
Ga0318495_100929341	3300031860	Soil	GILFDPLESVWIAVRGRRTLVAASSPEKLTEQMEAATRGEAGPDEGDKTQTWRALRRHER
Ga0306925_102461035	3300031890	Soil	PLESVWIAVRGERTLVAASSPEKLTEQVEAAARGESGPDEGDKTQTWRALRKHKRG
Ga0318551_107115912	3300031896	Soil	ESVWVAVLGKRTLVAASSPQALGERMEAATRGETAPDEGDKTQNWRALRRHRKG
Ga0318551_108546171	3300031896	Soil	RFPRWGILFDPMESVWVAVRGRRTLVAASSPEKLTEQVEAATRGEAGPDEGDRTQTWRALRNHERG
Ga0318520_100642671	3300031897	Soil	LFDPMESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPTEGDKTQTWRALRKYAQG
Ga0318520_106359912	3300031897	Soil	GILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAASRGEAGPDEGDKTQTWRALRKHER
Ga0310912_113915951	3300031941	Soil	DPIESVWIAVRGKRTLVAASSPEKLTEQVEAAARGESGPDEGDKTQTWRALRKHKRG
Ga0310916_105486741	3300031942	Soil	WVAVRGRRTLVAASSPEKLSEQVEAVSRGEAGPVEGDKTQTWRALRKYAQG
Ga0310916_106280952	3300031942	Soil	AVRGKRTLVAASSPEKLTEQVEAVARGEAGPDEGDRTRTWRALRDQG
Ga0306922_109029313	3300032001	Soil	RWGILFDPLESVWVAVLGKRTLVAASSPQALGERMEAATRGETAPDEGDKTQNWRALRRHRKG
Ga0306922_121003341	3300032001	Soil	PRWGILFDPLESMWVAVRGKQTLVASSPEKLTEQVEAAARGEAGPDEGDKTETWRALRKHKRG
Ga0318507_102443622	3300032025	Soil	PRWGILFDPMESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPSEGDKTQTWRALRKYAQG
Ga0318507_103198121	3300032025	Soil	LRTRFPRWGILFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAVARGEAGPDEGDRTRTWRALRDQG
Ga0318559_105943551	3300032039	Soil	RARFPGWGILFDPLESMWVAVSGKRTMVAASSPEKLTEQVEAATRGEAGPAEGDKTRTWRARRKYAGG
Ga0318558_101665993	3300032044	Soil	PLESVWIAVRGKRTLVAASSPEKLTEQVEAVARGEAGPVEGDKTRTWRALRDHEPG
Ga0318575_106165531	3300032055	Soil	FPRWGILFDPMESMWVAVRGRRTLVAASSPEKLTEQVEAATRGEAGPDEGAKTKTWRALRKQERG
Ga0318533_111557242	3300032059	Soil	VRIAVRGKRTLVAASSPEKLTKQVEAASRGEVGPAEGDKTQTWRALRKHG
Ga0318504_105076302	3300032063	Soil	LFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPVEGDKTQTWRALRKQGHA
Ga0318504_106615031	3300032063	Soil	GILFDPMESMWVAVRGRRTLVAASSPEKLTEQVEAATRGEAGPDEGDKTKTWRALRKQER
Ga0318540_105760882	3300032094	Soil	RWGILFDPMESVWVAVRGRRTLVAASSPEKLTEQVEAASRGEAGPSEGDKTQTWRALRKYAQG
Ga0348332_115497031	3300032515	Plant Litter	ARFPRWGIVFDPLESMWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKYGRG
Ga0335081_102658343	3300032892	Soil	RFPRWGIVFDPLESMWVAVRGKQALVAASSPEKLTEQVEAATRGEAGPDEGDKTRGWRALRRHERG
Ga0335076_100775382	3300032955	Soil	RARFPRWGILFDPLESMWVAVRGKTLVAASSPEKLTAQVEAATRGEAGPDEGDKTRTWRALRRHERG
Ga0310914_103270512	3300033289	Soil	ESVWVAVRGRRTLVAASSPEKLTEQMEAAARGETGPDEGAKTQTWRALRKYAQG
Ga0310914_113415711	3300033289	Soil	ESVWIAVRGKRTLVAASSPEKLTEQVEAVARGEAGPDEGDRTRTWRALRDQG
Ga0314867_036847_774_953	3300033808	Peatland	LFDPLESVWIAVRGKRTLVAASSPEKLTEQVEAAARGEAGPDEGDKTQTWRALRKHGRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences