Metagenome / Metatranscriptome Family F055036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055036
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	88 residues
Representative Sequence	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVSRILDNRLKNGSGS
Number of Associated Samples	104
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.58 %
% of genes near scaffold ends (potentially truncated)	27.34 %
% of genes from short scaffolds (< 2000 bps)	79.14 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.245 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.971 % of family members)
Environment Ontology (ENVO)	Unclassified (49.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.784 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF07992	Pyr_redox_2	28.78
PF09836	DUF2063	15.83
PF05114	DUF692	6.47
PF07681	DoxX	2.88
PF08448	PAS_4	1.44
PF13426	PAS_9	1.44
PF13490	zf-HC2	1.44
PF13188	PAS_8	0.72
PF01527	HTH_Tnp_1	0.72
PF06764	DUF1223	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	6.47
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.88
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.88
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.24 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.37 %
Unclassified	root	N/A	5.76 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.30 %
Unclassified	root	N/A	5.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.04 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.30 %
Unclassified	root	N/A	5.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.88 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	22.30 %
Unclassified	root	N/A	5.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.88 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.30 %
Unclassified	root	N/A	5.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.88 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12120029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300001546\|JGI12659J15293_10141479	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300002245\|JGIcombinedJ26739_100090711	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300002245\|JGIcombinedJ26739_100260214	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300003350\|JGI26347J50199_1000066	All Organisms → cellular organisms → Bacteria	5302	Open in IMG/M
3300003352\|JGI26345J50200_1000164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	4731	Open in IMG/M
3300003370\|JGI26337J50220_1023128	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300003505\|JGIcombinedJ51221_10404755	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300004082\|Ga0062384_101394542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300004092\|Ga0062389_100268383	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300004092\|Ga0062389_104439515	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300004152\|Ga0062386_100011753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6245	Open in IMG/M
3300004152\|Ga0062386_100836753	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005332\|Ga0066388_103929095	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005538\|Ga0070731_10223979	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300005591\|Ga0070761_10007636	All Organisms → cellular organisms → Bacteria	6178	Open in IMG/M
3300005591\|Ga0070761_10093684	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300005591\|Ga0070761_10324786	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005602\|Ga0070762_10390645	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005610\|Ga0070763_10409256	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005712\|Ga0070764_10041442	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300006176\|Ga0070765_100072290	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300006893\|Ga0073928_10545428	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300009038\|Ga0099829_10816451	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300009038\|Ga0099829_11279065	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009143\|Ga0099792_11050858	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300009552\|Ga0116138_1072388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300010343\|Ga0074044_10212887	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300010376\|Ga0126381_103547986	Not Available	612	Open in IMG/M
3300010379\|Ga0136449_101049569	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300011271\|Ga0137393_10253603	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300012189\|Ga0137388_10869778	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012361\|Ga0137360_10183104	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300012363\|Ga0137390_10880792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300012683\|Ga0137398_10636064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300012917\|Ga0137395_10842753	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012924\|Ga0137413_10963638	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012927\|Ga0137416_11622874	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300014201\|Ga0181537_10171876	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300014501\|Ga0182024_12007601	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300014657\|Ga0181522_10301026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300016341\|Ga0182035_10264170	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300016422\|Ga0182039_10200090	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300017946\|Ga0187879_10000263	All Organisms → cellular organisms → Bacteria	36920	Open in IMG/M
3300018025\|Ga0187885_10444945	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300020579\|Ga0210407_10295970	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300020579\|Ga0210407_10700496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300020580\|Ga0210403_10143987	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300020580\|Ga0210403_10950052	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300020581\|Ga0210399_10206698	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300020581\|Ga0210399_10259591	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300020582\|Ga0210395_10556050	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300020582\|Ga0210395_11273687	Not Available	539	Open in IMG/M
3300020583\|Ga0210401_10239747	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300020583\|Ga0210401_10350738	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300020583\|Ga0210401_10833209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300020583\|Ga0210401_10947946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300021088\|Ga0210404_10418744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300021170\|Ga0210400_10318399	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300021170\|Ga0210400_10568678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	935	Open in IMG/M
3300021171\|Ga0210405_10239931	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300021171\|Ga0210405_10982554	Not Available	637	Open in IMG/M
3300021180\|Ga0210396_10178790	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300021181\|Ga0210388_10107469	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300021181\|Ga0210388_10249125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1559	Open in IMG/M
3300021181\|Ga0210388_10271677	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300021401\|Ga0210393_10000756	All Organisms → cellular organisms → Bacteria	28020	Open in IMG/M
3300021401\|Ga0210393_10624081	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300021402\|Ga0210385_10564273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
3300021403\|Ga0210397_10241360	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300021405\|Ga0210387_10116197	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
3300021405\|Ga0210387_10664597	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300021405\|Ga0210387_11450911	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300021406\|Ga0210386_10555956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	992	Open in IMG/M
3300021406\|Ga0210386_10705746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	869	Open in IMG/M
3300021407\|Ga0210383_10500144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1049	Open in IMG/M
3300021407\|Ga0210383_10538995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1007	Open in IMG/M
3300021407\|Ga0210383_11535880	Not Available	550	Open in IMG/M
3300021420\|Ga0210394_10053890	All Organisms → cellular organisms → Bacteria → Proteobacteria	3509	Open in IMG/M
3300021433\|Ga0210391_10870351	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300021474\|Ga0210390_11185544	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021477\|Ga0210398_10014281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6918	Open in IMG/M
3300021477\|Ga0210398_10023640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5211	Open in IMG/M
3300021477\|Ga0210398_10367212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1173	Open in IMG/M
3300021478\|Ga0210402_10525420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1099	Open in IMG/M
3300021479\|Ga0210410_10226302	All Organisms → cellular organisms → Bacteria → Proteobacteria	1677	Open in IMG/M
3300021479\|Ga0210410_11078458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300021560\|Ga0126371_11136877	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300024347\|Ga0179591_1062292	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300026490\|Ga0257153_1037150	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300026555\|Ga0179593_1218704	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300027590\|Ga0209116_1012448	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300027619\|Ga0209330_1025728	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300027629\|Ga0209422_1148618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300027692\|Ga0209530_1223794	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300027692\|Ga0209530_1227604	Not Available	510	Open in IMG/M
3300027698\|Ga0209446_1006027	All Organisms → cellular organisms → Bacteria → Proteobacteria	2972	Open in IMG/M
3300027701\|Ga0209447_10002158	All Organisms → cellular organisms → Bacteria → Proteobacteria	5888	Open in IMG/M
3300027729\|Ga0209248_10023775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1915	Open in IMG/M
3300027767\|Ga0209655_10007548	All Organisms → cellular organisms → Bacteria	3717	Open in IMG/M
3300027767\|Ga0209655_10016151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2513	Open in IMG/M
3300027768\|Ga0209772_10029403	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300027795\|Ga0209139_10336316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300027824\|Ga0209040_10019228	All Organisms → cellular organisms → Bacteria	4494	Open in IMG/M
3300027829\|Ga0209773_10008055	All Organisms → cellular organisms → Bacteria	3972	Open in IMG/M
3300027853\|Ga0209274_10123991	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300027869\|Ga0209579_10015662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4408	Open in IMG/M
3300027889\|Ga0209380_10020003	All Organisms → cellular organisms → Bacteria	3789	Open in IMG/M
3300027908\|Ga0209006_10051645	All Organisms → cellular organisms → Bacteria → Proteobacteria	3691	Open in IMG/M
3300029636\|Ga0222749_10083643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1472	Open in IMG/M
3300030053\|Ga0302177_10026899	All Organisms → cellular organisms → Bacteria	3632	Open in IMG/M
3300030632\|Ga0210250_11358755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300030743\|Ga0265461_10689558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300030759\|Ga0265745_1025754	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300030855\|Ga0075374_11180407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300030923\|Ga0138296_1365797	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300030939\|Ga0138303_1459123	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300031022\|Ga0138301_1310037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1453	Open in IMG/M
3300031057\|Ga0170834_105734069	Not Available	581	Open in IMG/M
3300031128\|Ga0170823_12783553	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031231\|Ga0170824_102594036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300031231\|Ga0170824_113847755	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300031474\|Ga0170818_108769611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300031708\|Ga0310686_102377653	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300031708\|Ga0310686_103078284	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300031708\|Ga0310686_113313936	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031715\|Ga0307476_10010806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5699	Open in IMG/M
3300031718\|Ga0307474_10300235	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300031718\|Ga0307474_10459874	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300031719\|Ga0306917_10552672	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031754\|Ga0307475_10113904	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300031754\|Ga0307475_10170723	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300031754\|Ga0307475_11078839	Not Available	629	Open in IMG/M
3300031823\|Ga0307478_10086918	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300031823\|Ga0307478_10354535	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031910\|Ga0306923_11538265	Not Available	694	Open in IMG/M
3300031962\|Ga0307479_11243088	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300032160\|Ga0311301_11458056	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300032174\|Ga0307470_10077390	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.45%
Aquatic	Environmental → Aquatic	16.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.73%
Freshwater	Environmental → Aquatic → Freshwater	15.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030632	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_121200291	3300000789	Soil	MRRKQTVQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLVSKILDARLKLQSGS*
JGI12659J15293_101414791	3300001546	Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGS
JGIcombinedJ26739_1000907112	3300002245	Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS*
JGIcombinedJ26739_1002602142	3300002245	Forest Soil	MRRKQTVQRSELTCREFVGLIRRLRDXELSDVDRRSFLQHRGECVRCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLV
JGI26347J50199_10000663	3300003350	Bog Forest Soil	VQRSELTCREFVALIRRLRDDELSDVDRRTFLQHRANCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS*
JGI26345J50200_10001641	3300003352	Bog Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRANCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS*
JGI26337J50220_10231282	3300003370	Bog Forest Soil	MRGEQIVLRELTCREFVGLIRRLRDDELSDVDRRTFSQHRAKCVRCSDYLKGYELTITAAKRVAEDSRDTSETVIPKSLVDRILDARLKNGSGS*
JGIcombinedJ51221_104047551	3300003505	Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS*
Ga0062384_1013945422	3300004082	Bog Forest Soil	VQPSELTCRQFVGLIRKLRDDELSDVDRRSLLQHRAECPRCSDYLKGYELTISAAKRIAKDSRDSSEKTMPKSLVTRILDARLKLQSGS*
Ga0062389_1002683831	3300004092	Bog Forest Soil	EFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSAKEMIPESLVRRILGHPSNRRGRVDR*
Ga0062389_1044395151	3300004092	Bog Forest Soil	MKRKQAVQPSELTCREFVGLIGRLRDDELSDVERRTFLQHRARCVQCAEYLKGYELTISAARRIAEDSRDSGETLMPKSLVNRVLDSRLKNGNGS*
Ga0062386_1000117534	3300004152	Bog Forest Soil	VQRELTCREFVGLIRRLRDDELSDVDRRSFLLHRRKCVRCSDYLKGYELTIGATRRIAENSPDSGETTMPKSLVSKILRARLKRPSAS*
Ga0062386_1008367532	3300004152	Bog Forest Soil	VQRELTCRAFVGLIRRLREDELSDIDRRLFLQHRAKCRRCAEYLKGYEQTISAIKGIAEDSRDSSKVMMPESLVRRILAHTTNRRGRLDR*
Ga0066388_1039290952	3300005332	Tropical Forest Soil	MRGKQAVPREIRCRAFVGLIRALREAELSDSDRRSFFQHGAKCVRCAHYLKGYELTISAIKRIGEDLLDSSETKMPTSLVSRILTKRLKAQNGS*
Ga0070731_102239792	3300005538	Surface Soil	ARRHRKALMRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSDYLKGYELTIRAAKRMAEDSFDSSETVMPKSLVNRILDNRLKNGSGS*
Ga0070761_100076362	3300005591	Soil	VQREVTCRQFVGLIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNRILDSRLKNGSGS*
Ga0070761_100936842	3300005591	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS*
Ga0070761_103247862	3300005591	Soil	VPRSELTCREFVGLIRSLREDELSDVDRRLFLQHRAKCRRCAGYLKGYELTISATKGIAEDSRDSAKEMMPESLVRRILSNRP*
Ga0070762_103906451	3300005602	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILD
Ga0070763_104092562	3300005610	Soil	QHRKGLMRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIGEIPRDSCETVMPKSLVKRILDSRLKNGSG*
Ga0070764_100414423	3300005712	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVSRILDNRLKNGSGS*
Ga0070765_1000722902	3300006176	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRVAEDSRDSSETVIPKSLVDRILDNRLKNGSGS*
Ga0073928_105454281	3300006893	Iron-Sulfur Acid Spring	MRGKQAVQRELTCREFVGLIRRLRDDELSDVDRRSFSLHRQKCVRCSEYLKGYELTISATRRIAEDSRDSGETTMPK
Ga0099829_108164512	3300009038	Vadose Zone Soil	VPREIRCREFVGLIRALREGELSDTDRRSFFQHGRKCARCADYLMGYERTISAIKRIAEDSLDPNETAISKSLVSRILSNRLKQQSGS*
Ga0099829_112790652	3300009038	Vadose Zone Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAGDSRDSGEKTMPKSLVSKILDARLKLQSGS*
Ga0099792_110508582	3300009143	Vadose Zone Soil	VPRSGISCREFVALIRGLRDDELSDGDRRSFLEHRQKCARCADYLKGYELTISAIKRIAGDSLDPNETAIPKSLVSRILSARPKLQSGS*
Ga0116138_10723882	3300009552	Peatland	VQRSELTCREFVGLMRRLRDGELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIVEDSRDSSETVMPKSLVNRILDSRLKNGSGS*
Ga0074044_102128872	3300010343	Bog Forest Soil	VQRSELTCREFVALIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS*
Ga0126381_1035479861	3300010376	Tropical Forest Soil	DSPSPRCHRKSPMRGKQAVPREIRCRAFVGLIRALREAELSDSDRRSFFQHGAKCVRCAHYLKGYELTVSAIKRIGEDLLDSSETKMPTSLVSRILTKRLKAQNGS*
Ga0136449_1010495692	3300010379	Peatlands Soil	VQRSELTCREFGGLIRRLRDDELSDVDRRTFLQHRAECVRCSDYLKGYELTISAAKRIVEDSRDSSETVMPKSLVNRILDSRLKNGSGS*
Ga0137393_102536034	3300011271	Vadose Zone Soil	GLIRGYRDGELSSTDRQSFSQHGAACARCSNYLKGYELTISTVRRIGEDSRAGELTIPKSLVRKILGD*
Ga0137388_108697782	3300012189	Vadose Zone Soil	VPRSDLTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGEKTMPKSFVSRILSARPKQQSGS*
Ga0137360_101831042	3300012361	Vadose Zone Soil	VPRREITCREFVGLIRALRDGELSDVDRRSFLEHRQKCVRCADYLKGYELTTSAIKRMAGDPLDPNEMAIPKCLVSRILSARPKQQSGS*
Ga0137390_108807922	3300012363	Vadose Zone Soil	VQRSELTCREFVSLIRRLRDDELSDVDRRSFLQHRGDCARCSEYLKGYELTISAAKRIAEDSRDSGETTVPKSLVSKILDARLKLQSGS*
Ga0137398_106360641	3300012683	Vadose Zone Soil	DGELSDTDRGSFSRHARKCGRCSDYLRGYELTISATKRMEDDANDSAETMIPKSLVSRILGDRPKRPSAS*
Ga0137395_108427531	3300012917	Vadose Zone Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLVSKILDARLKRQSGS*
Ga0137413_109636381	3300012924	Vadose Zone Soil	VPRSGISCREFVALIRGLRDDELSDGDRRSFLEHRQKCARCADYLKGYELTISAIKRIAGDSLDPNETAIPKSLVSKILSARPKLQSGS*
Ga0137416_116228741	3300012927	Vadose Zone Soil	MRRKQTVQRSELTCREFVGLIRRLRDDELSDVDRRSFLRHRGDCTRCSDYLKGYELTIGAAKRIAEGSRDSGETTMPKSLVSKILDAR
Ga0181537_101718762	3300014201	Bog	MTCRKFVGLIRVLRDGELSDTDRRSFSEHAGNCGRCSDYLKGYELTISATKRIVDDANDSAETMMPESLVNRILDSRLKNGSGS*
Ga0182024_120076011	3300014501	Permafrost	VQREVTCRQFVGLIGRLREGELSDVDRRSFLQHGQKCVRCSGYLKGYELTISATKRIADDANDSAETMMPESLVNRILDSRLKNGSGL*
Ga0181522_103010262	3300014657	Bog	LIRVLRDGELSDTDRRSFSEHAGNCGRCSDYLKGYELTISATKRIVDDANDSAETMMPESLVNRILDSRLKNGSGS*
Ga0182035_102641703	3300016341	Soil	MRGKQARPHEITCRDFVGSIRALREAELSDADLRSFFQHGRKCARCAYYLKGYELTIRAIKRIGEDSLDPSETKMPKSLVSRILSKRLKLQNGP
Ga0182039_102000903	3300016422	Soil	MRGKQARPHETTCRDFVGSIRALREAELSDADLRSFFQHGRKCARCAHYLKGYELTIRAIKRIGEDSLDPSETKMPKSLVSRILSKRLKLQNGS
Ga0187879_100002636	3300017946	Peatland	VQRSELTCREFVGLMRRLRDGELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIVEDSRDSSETVMPKSLVNRILDSRLKNGSGS
Ga0187885_104449452	3300018025	Peatland	VQRSELTCREFVGLMRRLRDGELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIVEDSRDSSETVMPKSLVNRIL
Ga0210407_102959702	3300020579	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGEKTMPKSLVSKILDARLK
Ga0210407_107004962	3300020579	Soil	VPRSGISCRKFVALIRGLRDDELSDGDRRSFLEHRQECARCADYLKGYELTISAIKRIVGDSLDPNEAAIPKSLVSRILSARSKLQSGS
Ga0210403_101439872	3300020580	Soil	VPRSGISCRKFVALIRGLRDDELSDGDRRSFLEHRQECARCADYLKGYELTISAIKRIVGDSLDPNEAAIPKSLVSRILNARSKLQSGS
Ga0210403_109500522	3300020580	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLLSKILDAR
Ga0210399_102066982	3300020581	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLLSKILDARLKLQSGS
Ga0210399_102595912	3300020581	Soil	VQRSELTCRKFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSCDSSETVTPKSLVNRILDNRLKNGSGS
Ga0210395_105560502	3300020582	Soil	MRRKQTVQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEGSRDSDEMVMPKSLVNRILDNRLKNGSGS
Ga0210395_112736872	3300020582	Soil	VPRSELTCREFVGLIRSLREDELSDVDRRLFLQHRAKCRRCAGYLKGYELTISATKGIAEDLRDSAKEMMPESLIRRILGRKF
Ga0210401_102397472	3300020583	Soil	VQRSELTCREFVGLIRRLRDHELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLVSKILDARLKLLQSGS
Ga0210401_103507382	3300020583	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSRETVMPKSLVNRILDNRLRNGSGS
Ga0210401_108332092	3300020583	Soil	RLRDNELSDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEGSRDSDEMVMPKSLVNRILDNRLKNGSGS
Ga0210401_109479461	3300020583	Soil	SELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGEKTMPKFLVTKILDARLKLRSGS
Ga0210404_104187441	3300021088	Soil	VLRSELTCREFVDLIRRLRDDELSDVERPSFLQHRTKCVRCSDYLRGYELTISAAKRIAEDSSETVMPKSLVNRILDNRLKNGSGS
Ga0210400_103183993	3300021170	Soil	VQRSELTCREFVGLIRRLRDNELIDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEGSRDSDEMVMPKSLVNRILDNRLKNGSGS
Ga0210400_105686782	3300021170	Soil	CREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGEKTMPKFLVTKILDARLKLRSGS
Ga0210405_102399312	3300021171	Soil	VQRSPEMTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSGYLKGYELTISAAKRIAEDSRDFSETVMPKSLVNRILDNRLKNGSGS
Ga0210405_109825542	3300021171	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTVSAAKRIAEGSRDSGETTMPKSLVSKILDARLKLQSGS
Ga0210396_101787902	3300021180	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVSRILDNRLKNGSGS
Ga0210388_101074692	3300021181	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVSRILDNRLKNGSGS
Ga0210388_102491252	3300021181	Soil	MRGKQTVLRSELTCREFVDLIRRLRDDELSDVERPSFLQHRTKCVRCSDYLRGYELTISAAKRIAEDSSETVMPKSLVNRILDNRLKNGSGS
Ga0210388_102716772	3300021181	Soil	VQREVTCRQFVGLIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNRILDSRLKNGSGS
Ga0210393_1000075616	3300021401	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAKDSRDSSETVMPKSLVDRILDNRLKNGSGS
Ga0210393_106240811	3300021401	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEDSRDSSETVMPKSLVSRILDSRLKNGSGS
Ga0210385_105642731	3300021402	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS
Ga0210397_102413602	3300021403	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAKDSRDSSETVMPKSLVDRILDNRLKNGSGS
Ga0210387_101161973	3300021405	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRANCVRCSDYLKGYELTISAAKRIAEDSCDSSETVMPTSLVNRILDNRPKNGSGS
Ga0210387_106645972	3300021405	Soil	VPREITCREFVSLIRALREGELSDVDRRSFFQHGTECARCTHYLRGYELTIGAIKRISEESLDPNETTIPRPLVRRILSNRLKPGSNS
Ga0210387_114509111	3300021405	Soil	MRGKQTVQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDFSETVMPKSLVNRILDNRLKNGSGS
Ga0210386_105559561	3300021406	Soil	RLRDHELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLVSKILDARLKLLQSGS
Ga0210386_107057461	3300021406	Soil	RKGLMRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS
Ga0210383_105001442	3300021407	Soil	CREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELAISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS
Ga0210383_105389952	3300021407	Soil	MRRKQTVQRSELTCREFVGLIGRLRDNELSDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEGSRDSDEMVMPKSLVNRILDNRLKNGSGS
Ga0210383_115358801	3300021407	Soil	QAVPRSELTCREFVGLIRSLREDELSDVDRRLFLQHRAKCRRCAGYLKGYELTISATKGIAEDSRDSAKEMMPESLVRRILGRKF
Ga0210394_100538902	3300021420	Soil	VQRSELTCREFIGLIRRLRDDELSEVDRRSFLQHRAECARCSGYLKEYELTISAAKRIAEDSRDSSETVMPKSLVNRILDNRLKNGSGS
Ga0210391_108703511	3300021433	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRVAEDSRDSSETVIPKSLVDRILDNRLKNGSGS
Ga0210390_111855441	3300021474	Soil	MRRKQTVQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHREKCARCSDYLKGYERTISAAKRIAEGSRDSDEMVMPKSLVNRILDNRLKNGSGS
Ga0210398_100142814	3300021477	Soil	VQRSELTCREFVGLIRRLRDDELSEVDRRSFLQHRAECARCSGYLKEYELTISAAKRIAEDSRDSSETVMPKSLVNRILDNRLKNGSGS
Ga0210398_100236406	3300021477	Soil	VPRSELTCREFVGLIRSLREDELSDVDRRLFLQHRAKCRRCAGYLKGYELTISATKGIAEDSRDSAKEMMPESLIRRILGRKF
Ga0210398_103672122	3300021477	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELAISAAKRIAEDSRDSSETVIPKSLVNRILDNRLKNGSGS
Ga0210402_105254202	3300021478	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGEKTMPKSLVSKILDARLKLQSGS
Ga0210410_102263023	3300021479	Soil	MRGKQTVQRSELTCREFVGLIRRLRDHELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSLLSKILDARLKLQSGS
Ga0210410_110784581	3300021479	Soil	RLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISVAKRIAEDSRDSSETVMPMSLVNRILDNRLKNGSGS
Ga0126371_111368772	3300021560	Tropical Forest Soil	MWGAPAVPREITCREFVRLIRELRDDELSDVDRRSFWRHRAKCSRCSAYLKGYELTISATRRIKEDSRDTAGKTIPESVVSRILDGGLKHRSSS
Ga0179591_10622925	3300024347	Vadose Zone Soil	VPRREITCQEFIGLIRALRDGELRDTDRRSFSQHARKCGRCSDYLKGYELTISATKRMADDANDSAEAMIPKSLVSRILGDRPKRPSAS
Ga0257153_10371502	3300026490	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSRDSGETTMPKSL
Ga0179593_12187042	3300026555	Vadose Zone Soil	VPREIRCREFVGLIRALREGELSDTDRRSFFQHGRKCARCADYLMGYERTISAIKRIAEDSLDPNETAISKSLVSRILSNRLKQRSGS
Ga0209116_10124482	3300027590	Forest Soil	MRRGKQIVQREVTCRQFVGLIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNRILDSRLKNGSGS
Ga0209330_10257282	3300027619	Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVMPKSLVNRILDNRLKNGSGS
Ga0209422_11486182	3300027629	Forest Soil	VQRSDLTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSDYLKGYELTIRAAKRIAEDSRDSGEKTMPKSLVSRILDARQKLQSGS
Ga0209530_12237941	3300027692	Forest Soil	VQREVTCRQFVGLIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNR
Ga0209530_12276042	3300027692	Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLEHRAKCVRCSDYLKGYELTISAAKRIAKDSRDSSETVIPKSLVNRILDTRLKNGSGS
Ga0209446_10060272	3300027698	Bog Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAECVRCSDYLKGYELTISAVKRIAEDSRDSSETVMPKSLVNRILDSRLKNGSGL
Ga0209447_100021583	3300027701	Bog Forest Soil	VQRSELTCREFVALIRRLRDDELSDVDRRTFLQHRANCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS
Ga0209248_100237752	3300027729	Bog Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRANCVRCCDYLKGYELTISAAKRVAEDSRDSSETVIPKSLVNRILDSRLKNGTGS
Ga0209655_100075483	3300027767	Bog Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRANCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS
Ga0209655_100161513	3300027767	Bog Forest Soil	MRGEQIVLRELTCREFVGLIRRLRDDELSDVDRRTFSQHRAKCVRCSDYLKGYELTITAAKRVAEDSRDTSETVIPKSLVDRILDARLKNGSGS
Ga0209772_100294032	3300027768	Bog Forest Soil	VLRELTCREFVGLIRRLRDDELSDVDRRTFSQHRAKCVRCSDYLKGYELTITAAKRVAEDSRDSSETVIPKSLVNRILDARLKNGSGS
Ga0209139_103363161	3300027795	Bog Forest Soil	EFVGLIRRLRDDELSDVDRRSFLQHRANCVRCCDYLKGYELTISAAKRVAEDSRDSSETVIPKSLVNRILDSRLKNGTGS
Ga0209040_100192283	3300027824	Bog Forest Soil	VQRELTCREFVGLIRRLRDDELSDVDRRSFLLHRRKCVRCSDYLKGYELTIGATRRIAENSPDSGETTMPKSLVSKILRARLKRPSAS
Ga0209773_100080553	3300027829	Bog Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRANCVRCSDYLKGYELTISAVKRMAEDSRHSSETVPKSLVNRILDSRLKNGSGS
Ga0209274_101239912	3300027853	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELAISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS
Ga0209579_100156626	3300027869	Surface Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSDYLKGYELTIRAAKRMAEDSFDSSETVMPKSLVNRILDNRLKNGSGS
Ga0209380_100200034	3300027889	Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSSETVIPKSLVNRILDNKLKNGSGS
Ga0209006_100516452	3300027908	Forest Soil	VQRSELTCREFVGLIRRLRDHELSDVDRRSFLQHRGECVRCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLVSKILDARLKLQSGS
Ga0222749_100836432	3300029636	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLVSKILGAR
Ga0302177_100268993	3300030053	Palsa	VQHNVMTCRKFVGLIRVLRDGELSDTDRRSFSEHAGNCGRCSDYLKGYELTISATKRIVDDANDSAETMMPESLVNRILDSRLKNGSGS
Ga0210250_113587552	3300030632	Soil	CRQFVGLIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNRILDSRLKNGSGS
Ga0265461_106895581	3300030743	Soil	PIGRLRDGELSDVDRRSFLQHGQKCVRCSDYLKGYELTISATKRIADDAIDSAETIMPKSLVNRILDSRLKNGSGS
Ga0265745_10257541	3300030759	Soil	MRGKQTVQRSELTCREFVGLIRRFRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIGENSHDSSETVMPKSLVNRIL
Ga0075374_111804072	3300030855	Soil	VQRSELTCREFVGLIRRFRDDELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRVAEDSRDSGETIMPKSLVSRILSDRQKLQSGS
Ga0138296_13657972	3300030923	Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSEYLKGYELTISAAKRITEDSRDSGETTMPKSLVSKILDARLKLQSNS
Ga0138303_14591232	3300030939	Soil	VQRSELTCREFVGLIRRFRDDELSAVDRRSFLQHRGECARCSDYLKGYELTISAARRITEDSRDSGEKTMPKSLVSRILSDRLKLQSGS
Ga0138301_13100373	3300031022	Soil	RSELTCREFVGLIRRFRDDELSAVDRRSFLQHRGECARCSEYLKGYELTISAAKQIAEDSRVSGEKTIPRSLVTKILDARMKLQSGS
Ga0170834_1057340692	3300031057	Forest Soil	MRKKQTAQRSELTCREFVGLIRRLRGDELSDVDRRSFLQHRGECAGCSEYLKGYELTISAVKRIAEDSRDSGETIMPKSLVSRILSVRQKLQSGS
Ga0170823_127835532	3300031128	Forest Soil	VQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSEYLKGYELTISAAKRIAEESRDSGETTMPKSLVSRILSVRQKLQSGS
Ga0170824_1025940361	3300031231	Forest Soil	REFVGLIRRLRDDELSDVDRRSFLQHRGECARCSEYLKGYELTISAVKRIAEDSRDSGETIMPKSLVSRILSVRQKLQSGS
Ga0170824_1138477552	3300031231	Forest Soil	MRGKQTVQRSELTCREFVGLIRRFREDELSDVDRRSFLQHRGECARCSEYLKGYELTISAAKRIAEDPRDSGEKPMPKSLVSRILSDREKLQSGS
Ga0170818_1087696111	3300031474	Forest Soil	PDILRTLLHRKALLRRKQTVQRSELTCREFVGLIRRLRDDELSDVDRRSFLQHRGECARCSEYLKGYELTISAVKRIAEDSRDSGETIMPKSLVSRILSVRQKLQSGS
Ga0310686_1023776531	3300031708	Soil	MRGKQTVQRSELTCREFVGLMRRLRDGELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIAEDSRDSTETVMPKSLVNR
Ga0310686_1030782842	3300031708	Soil	GKQTVQRSDLTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIGENSHDSSETVMPKPLVNRILDNRLKNGSGS
Ga0310686_1133139362	3300031708	Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDFSETMMPKSLVNRILDNRLKNGSGS
Ga0307476_100108065	3300031715	Hardwood Forest Soil	VQRSELTCREFVRLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRITEDSRDFSETVMPKSLVNRILDNRLKNGSGS
Ga0307474_103002352	3300031718	Hardwood Forest Soil	MRGKQTVQRSELTCREFVGLIRRLRDDELSDVDRRTFLQHRAKCVRCSDYLKGYELTISAAKRIGEIPRDSCETVMPKSLVNSILDNRLKNGSGS
Ga0307474_104598742	3300031718	Hardwood Forest Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGETVMPKSLVKRILDNRLK
Ga0306917_105526721	3300031719	Soil	MRGKQARPHETTCRDFVGSIRALREAELSDADLRSFFQHGRKCARCAHYLKGYELTIRAIKRIGEDSLDPSETKMPKSLVSRILSKRLKLQNGP
Ga0307475_101139042	3300031754	Hardwood Forest Soil	VPRELTCREFVNLIRALRDDELSDADRRSFLHHRAKCARCSDYLKGYELTISATKRMANDSRDCGETTMPKSLVSRILSQRPKLQSGS
Ga0307475_101707233	3300031754	Hardwood Forest Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLVSKILDARPKLQSGS
Ga0307475_110788391	3300031754	Hardwood Forest Soil	VPLREITCREFVGLIRVLRDGESSDTDRRSFSQHAAKCGRCSDYLKGYELTITATKRIADDANDSAETTVPKSLVSRILGDRAKRPSPS
Ga0307478_100869182	3300031823	Hardwood Forest Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGETTMPKSLVSKILDARLKLQSGS
Ga0307478_103545352	3300031823	Hardwood Forest Soil	VQRSELTCREFVGLIRRLRDHELSDVDRRSFLQHRGECARCSDYLKGYELTIGAAKRIAEDSLDSGETTMPKSLVSKILDARLKLQSGS
Ga0306923_115382652	3300031910	Soil	PMRGKQARPHETTCRDFVGSIRALREAELSDADLRSFFQHGRKCARCAHYLKGYELTIRAIKRIGEDSLDPSETKMPKSLVSRILSKRLKLQNCP
Ga0307479_112430881	3300031962	Hardwood Forest Soil	VQRSELTCREFVGLIRRLRDNELSDVDRRSFLQHREECARCSDYLKGYELTIGAAKRIAEDSRDSGEKTMPKSLVSKILDA
Ga0311301_114580561	3300032160	Peatlands Soil	MRGKQTVQRSELTCREFGGLIRRLRDDELSDVDRRTFLQHRAECVRCSDYLKGYELTISAAKRIVEDSRDSSETVMPKSLVNRILDSRLK
Ga0307470_100773902	3300032174	Hardwood Forest Soil	VQRSELTCREFVGLIGRLRDNQLSDVDRRSFLQHRGECARCSDYLKGYELTISAAKRIAEDSRDSGEKTMPKFLVSKILDARQKLQSGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences