Metagenome / Metatranscriptome Family F055008

Basic Information
Family ID	F055008
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	115 residues
Representative Sequence	YYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Number of Associated Samples	125
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (25.899 % of family members)
Environment Ontology (ENVO)	Unclassified (51.079 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.647 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.74% β-sheet: 9.26% Coil/Unstructured: 25.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01070	FMN_dh	64.03
PF08220	HTH_DeoR	10.07
PF00370	FGGY_N	2.88
PF03797	Autotransporter	0.72
PF14342	DUF4396	0.72
PF01019	G_glu_transpept	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	64.03
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	64.03
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.72

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.40%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.60%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	27.34%
Unclassified	Environmental → Aquatic → Marine → Unclassified	26.62%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.99%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.79%
Strait	Environmental → Aquatic → Marine → Strait	6.47%
Inlet	Environmental → Aquatic → Marine → Inlet	4.32%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.60%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.16%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	27.34%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	26.62%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.51%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.19%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.32%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.60%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	25.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	24.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.51%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.19%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.47%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.32%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.88%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.16%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.16%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.44%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.44%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.44%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.72%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.72%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.72%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.72%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.72%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.72%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.72%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000223	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P4 10m	Environmental	Open in IMG/M
3300000265	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10	Environmental	Open in IMG/M
3300001950	Marine microbial communities from Delaware Bay, New Jersey, USA - GS011	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020240	Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556046-ERR598982)	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020296	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)	Environmental	Open in IMG/M
3300020301	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997)	Environmental	Open in IMG/M
3300020305	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX556024-ERR599003)	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020362	Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX556035-ERR599049)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020402	Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022853	Saline water microbial communities from Ace Lake, Antarctica - #371	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023240	Saline water microbial communities from Ace Lake, Antarctica - #870	Environmental	Open in IMG/M
3300023245	Saline water microbial communities from Ace Lake, Antarctica - #423	Environmental	Open in IMG/M
3300023293	Saline water microbial communities from Ace Lake, Antarctica - #1165	Environmental	Open in IMG/M
3300024188	Seawater microbial communities from Monterey Bay, California, United States - 2D	Environmental	Open in IMG/M
3300024192	Seawater microbial communities from Monterey Bay, California, United States - 47D	Environmental	Open in IMG/M
3300024221	Seawater microbial communities from Monterey Bay, California, United States - 80D	Environmental	Open in IMG/M
3300024226	Seawater microbial communities from Monterey Bay, California, United States - 81D	Environmental	Open in IMG/M
3300024229	Seawater microbial communities from Monterey Bay, California, United States - 54D	Environmental	Open in IMG/M
3300024230	Seawater microbial communities from Monterey Bay, California, United States - 48D	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024247	Seawater microbial communities from Monterey Bay, California, United States - 36D_r	Environmental	Open in IMG/M
3300024248	Seawater microbial communities from Monterey Bay, California, United States - 48D_r	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024266	Seawater microbial communities from Monterey Bay, California, United States - 75D	Environmental	Open in IMG/M
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental	Open in IMG/M
3300024292	Seawater microbial communities from Monterey Bay, California, United States - 37D	Environmental	Open in IMG/M
3300024296	Seawater microbial communities from Monterey Bay, California, United States - 36D	Environmental	Open in IMG/M
3300024314	Seawater microbial communities from Monterey Bay, California, United States - 70D	Environmental	Open in IMG/M
3300024315	Seawater microbial communities from Monterey Bay, California, United States - 20D	Environmental	Open in IMG/M
3300024318	Seawater microbial communities from Monterey Bay, California, United States - 46D	Environmental	Open in IMG/M
3300024321	Seawater microbial communities from Monterey Bay, California, United States - 31D	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300024335	Seawater microbial communities from Monterey Bay, California, United States - 90D	Environmental	Open in IMG/M
3300024359	Seawater microbial communities from Monterey Bay, California, United States - 34D	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026491	Seawater microbial communities from Monterey Bay, California, United States - 52D	Environmental	Open in IMG/M
3300026513	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027298	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028124	Seawater microbial communities from Monterey Bay, California, United States - 25D	Environmental	Open in IMG/M
3300028127	Seawater microbial communities from Monterey Bay, California, United States - 49D	Environmental	Open in IMG/M
3300028128	Seawater microbial communities from Monterey Bay, California, United States - 57D	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300028136	Seawater microbial communities from Monterey Bay, California, United States - 9D	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028273	Seawater microbial communities from Monterey Bay, California, United States - 51D	Environmental	Open in IMG/M
3300028290	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028414	Seawater microbial communities from Monterey Bay, California, United States - 33D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100470901	3300000101	Marine	NKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRTQTVLKNKKEIGTSLGATNLFNIKKKNKLQTITINKYQNQSFETIYKNWENNLFKKKMFNHS*
LPjun09P410mDRAFT_10103012	3300000223	Marine	YNDYLIYPSYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTAINKYQNHSFETVYKNWENKLYEKKMFSHS*
LP_A_09_P04_10DRAFT_10195871	3300000265	Marine	YDYLTKIFKIPTNTKCIKNFKYSDYLIYPSYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS*
GOS2227_10088922	3300001950	Marine	IAFMLNFCLNKMNSNNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSHP*
GOS2242_10229172	3300001967	Marine	MLNYCLNKMNSKNTVILDGPITKNLMIMKLLSTLRPKQTVLKNKREIGTSLGATNLFNINRKNKLDTISIKKFQNQSLFSLYQLWESNLYKKELFSHP*
GOScombined01_1066270482	3300002040	Marine	MKLLSSLRTIQVVLKNKKEIGTSLGATNLFDMKRKNKLDTIIIKKFHSNSLQNIFQLWEANLYKKELFSHP*
JGI26273J51734_101825301	3300003620	Marine	FLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNDS*
Ga0055584_1026574021	3300004097	Pelagic Marine	SYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNATIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS*
Ga0066865_102178122	3300005523	Marine	LFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNFKNVYNIWEENLYKKKLLNSS*
Ga0066835_101876062	3300005606	Marine	ICLYISFVINFCLNQMKSSNTIILDGPITKNFTIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS*
Ga0078893_103756642	3300005837	Marine Surface Water	LYIAFLINFCLNKLNSANTIILDGPITKNNSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYNIWEGNLYKKKLFNNS*
Ga0078893_104446692	3300005837	Marine Surface Water	SKNTIILDGPITKNLMIMKLLSSLRPKQTVLKNKREIGTSLGATNLFNINSKNKLDTISIKKFQNQSLFSLYQLWESNLYKKELFSHP*
Ga0075446_101713772	3300006190	Marine	MLFHNHFCLNKMKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSLEKIYKNWENNLFKKDMFSHS*
Ga0099675_14186313	3300006334	Marine	MKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKENKLQTVVIKKYQNQSLQAIYK
Ga0102954_10841742	3300007778	Water	MNSNNTIILDGPITKNPTIMKLLASLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSHP*
Ga0105744_10583941	3300007863	Estuary Water	LYKKLKKAEIYYLICLYIAFLINFCLDKLNSANTIILDGPITKNDCIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYNIWEGNLYKKKLFNNS*
Ga0115551_12624352	3300009193	Pelagic Marine	MKSSNTIILDGPITKNATIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDINRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS*
Ga0114994_102578621	3300009420	Marine	KKHNINTNLFKSLNKGQIYFLICIYMSFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRTQTVLKNKKEIGTSLGATNLFNIKKKNKLQTITINKYQNQSFETIYKNWENNLFKKEMFSHS*
Ga0115003_103239971	3300009512	Marine	MKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS*
Ga0115003_103593852	3300009512	Marine	MKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSLEKIYKNWENNLFKKDMFSHS*
Ga0115004_104445211	3300009526	Marine	SNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS*
Ga0115001_104234833	3300009785	Marine	DGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS*
Ga0115001_106470071	3300009785	Marine	IILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKDIFRHS*
Ga0160422_105489322	3300012919	Seawater	SNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFYIKKKNKLQTVIIKKYQNQSLEAIYKNWEQNLYKKELFRHS*
Ga0163111_122011522	3300012954	Surface Seawater	LNFCLNKMNSNNTIILDGPITKNPMIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDMKRKNKLDTIIIKKFHSNSLQNIFQLWEANLYKKELFSHP*
Ga0181398_10344812	3300017725	Seawater	KVFKITTNTKVLKNFNYKNYLIYPSYASGGAFINKKININFFKKLKKGQIYYLICLYIAFVINFSLNKMKSSNTIILDGPITKNITIMKILSSLRPKQLVLKNKKEIGTTLGATNLFNIKKKNKLQTVDIPKYQNQSMKSSYKLWEEDLYKKELFSHS
Ga0181398_10525861	3300017725	Seawater	EIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNNSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0181418_11508381	3300017740	Seawater	PLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYIAFLINFCLNKLNSANTIILDGPITKNNSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYNIWEGSLYKKKLFNNS
Ga0181421_10127021	3300017741	Seawater	RINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0181421_10693582	3300017741	Seawater	FNIISNTKPLTKFNFEDYLIYTSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYIAFLINFCLNKLNSANTIILDGPITKNDSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0181397_11958741	3300017744	Seawater	RITSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMKSSNTIILDGPITKNDCIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIKKKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS
Ga0181411_10409221	3300017755	Seawater	TSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNDS
Ga0187221_12290131	3300017769	Seawater	ADGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0181394_11622401	3300017776	Seawater	KTFNITSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0181583_107166381	3300017952	Salt Marsh	NNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQIWEANLYKKELFSHP
Ga0181582_100672381	3300017958	Salt Marsh	KMNSNNTIILDGPITKNTTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0181590_100131161	3300017967	Salt Marsh	NLSKRQVYYLVCLYIAFMLNFCLNKMNSNNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0181553_102307141	3300018416	Salt Marsh	KKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0181593_100958901	3300018423	Salt Marsh	QVYYLVCLYIAFMLNFCLNKMNSNNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0181568_112230082	3300018428	Salt Marsh	SRTRFVYWIYYSPKFITKKYYLVCLYIAFILNYCLEKMNSKNTIILDGPITKNANIMRVLSTLRPKQTVLKNKREIGTSLGATNLFDIKKKNKLETVTIPKLQKHSFMTAYQLWEVNLSKKELFSHP
Ga0181595_100481044	3300020053	Salt Marsh	NNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0181578_101181581	3300020189	Salt Marsh	FNKMNSNNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0181604_101021761	3300020191	Salt Marsh	ITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0211494_10729922	3300020240	Marine	MLNYCLNKMNSKNTIILDGPITKNLMIMKLLSTLRPKQTVLKNKREIGTSLGATNLFNINRKNKLNTISIKKFQNQSLFSLYQLWESNLHKKELFSHP
Ga0211529_10740222	3300020258	Marine	IAFMLNYCLNKMNSKNTIILDGPITKNLMIMKLLSTLRPKQTVLKNKREIGTSLGATNLFNINRKNKLDTISIKKFQNQSLFSLYQLWESNLYKKELFSHP
Ga0211519_10062955	3300020266	Marine	FNYKDFLIYPSYAAGGAFIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNNCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0211519_10515852	3300020266	Marine	NKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQSLYKKELFRHS
Ga0211474_10197332	3300020296	Marine	LIYPSYASGGGFSINKINIGFYKGLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQYLQTIYKNWEQNLYKKELFRHS
Ga0211474_10207841	3300020296	Marine	IYYLICLYIAFVINFSLNKMKSSNTIILDGPITKNITIMKILSSLRPKQLVLKNKKEIGTTLGATNLFNIKKKNKLQTVDIPKYQNQSMKSSYKLWEEDLYKKELFSHS
Ga0211650_10511431	3300020301	Marine	YIAFKLNFCLNKMNSNNTIILDGPITKNPIIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDMKRKNKLDTIIIKKFHSNSLQNIFQLWEANLYKKELFSHP
Ga0211513_10468981	3300020305	Marine	RISNKTRAIKNFSFHDYLIYPSYASGGGFSINKINIGFYEGLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211690_11290471	3300020335	Marine	FKQHHINTNLFKGLNKGQIYFLICIYISFVMNFCLNKIKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKKKNKLQTTTINKYKNHSFETIYKNWENSLFKKKMFSHS
Ga0211510_10384271	3300020336	Marine	FVINFSLNKMKSSNTIILDGPITKNITIMKILSSLRPKQLVLKNKKEIGTTLGATNLFNIKKKNKLQTVDIPKYQNQSMKSSYKLWEEDLYKKELFSHS
Ga0211488_101179461	3300020362	Marine	LICLYIVFELNFCLDKMNSNNTIILDGPITKNSTMMSLLSCLRPDQKILKNKKEVGTSLGATNLFNIKRKNKLDTITINTTSNKKVKKIYQTWEENLYNKELFSHA
Ga0211477_102527841	3300020374	Marine	LYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQTVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQYLQTIYKNWEQNLYKKELFRHS
Ga0211476_101048531	3300020381	Marine	YAAGGAFIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNNCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0211476_101882711	3300020381	Marine	NKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQTVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQYLQTIYKNWEQNLYKKELFRHS
Ga0211476_101883741	3300020381	Marine	NKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNINKKNKLQTVVIKKYQNQSLQAIYKNWEQSLYKKELFRHS
Ga0211675_100599951	3300020391	Marine	YASGGGFSINKINIGFYEGLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211583_100941272	3300020397	Marine	GPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKENKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211499_101012421	3300020402	Marine	GGFSINKINISFYERLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKENKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211516_101173991	3300020413	Marine	EGLNKGQIYYLICLYISFVINFCLNQMRSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211644_101901102	3300020416	Marine	NKNKFKSLSKKQIYYLVCLYIAFVLNYCLNKMNSNNTIILDGPITKNSTIMKVLSTLRPKQLVLKNKKEIGTSLGATNLFDIKRKNKLDTVTIKKIHSKSLQDIYQLWDANLYKKELFSY
Ga0211653_103411012	3300020421	Marine	MNSKNTIILDGPITKNLMIMKLLSTLRPKQTVLKNKREIGTSLGATNLFNINRKNKLDTILIKKFQNQSLFSFYQLWESNLYKKELFSHP
Ga0211518_100927991	3300020440	Marine	ILDGPITKNSTIMKVLSTLRPKQLVLKNKKEIGTSLGATNLFDIKRKNKLDTVTIKKIHSKSLQDIYQLWDANLYKKELFSYP
Ga0211695_102648572	3300020441	Marine	IGFYKGLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211559_105667251	3300020442	Marine	IYYLICLYIAFELNFCLDKMNSNNTIILDGPITKNSTIMNLLSCLRPDQKILKNKKEVGTSLGATNLFNIKRKNKLDTITINATSNQKVKKIYQTWEENLYNKELFSHA
Ga0211641_101735722	3300020450	Marine	MNSKNTIILDGPITKNIMIMKLLSTLRPKQTVLKNKREIGTSLGATNLFNINRKNKLDTISIKKFQNQSLFSLYQLWESNLYKKELFSHP
Ga0211641_102952552	3300020450	Marine	SSNTIILDGPITKNITIMKILSSLRLKQLVLKNKKEIGTTLGATNLFNIKKKNKLETVVISKYQNKSLQSLYQLWDKNLHKKELFSHSK
Ga0211548_104646071	3300020454	Marine	IKEFKITTNTKALKNFDYKDYLIYPSYASGGAFANKKININLFKKLNRGQIYYLICLYIAFVINFCLNTIKSSNTIILDGPITKNITIMKILSSLREKQLVLKNKKEIGTTLGATNLFNINKKNKLQTVTISKYQNKSLKSLYQLWEKNLYRKELFSHSK
Ga0211548_106154922	3300020454	Marine	IYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211643_101559441	3300020457	Marine	IKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKINSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNFKNVYNIWEENLYKKKLLNSS
Ga0211546_100489793	3300020462	Marine	REYDHLMGVFRISNKTRAIKNFSFHDYLIYPSYASGGGFSINKINIGFYEGLNKGQIYYLICLYISFVINFCLNQMKSSNTIILDGPITKNITIMKILSSLRKKQIVLKNKREIGTTLGATNLFNIKKKNKLQTVVIKKYQNQSLQAIYKNWEQNLYKKELFRHS
Ga0211546_104049052	3300020462	Marine	PSYASGGAFANKKININLFKKLNRGQIYYLICLYIAFVINFCLNTIKSSNTIILDGPITKNITIMKILSSLREKQLVLKNKKEIGTTLGATNLFNINKKNKLQTVTISKYQNKSLKSLYQLWEKNLYRKELFSHSK
Ga0211547_103924372	3300020474	Marine	SGGAFINKKININFFKKLKKGQIYYLICLYIAFVINFSLNKMKSSNTIILDGPITKNITIMKILSSLRPKQLVLKNKKEIGTTLGATNLFNIKKKNKLQTVDIPKYQNQSMKSSYKLWEEDLYKKELFSHS
Ga0211547_105615892	3300020474	Marine	NINLFKKLNRGQIYYLICLYIAFVINFCLNTIKSSNTIILDGPITKNITIMKILSSLREKQLVLKNKKEIGTTLGATNLFNINKKNKLQTVTISKYQNKSLKSLYQLWEKNLYRKELFSHSK
Ga0181598_10558351	3300020810	Salt Marsh	NYKEFLIYPSYAAGGAFIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0206683_103557171	3300021087	Seawater	YDHLIKTFNITSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0213862_101796971	3300021347	Seawater	LSKRQVYYLVCLYIAFMLNFCLNKMNSNNTIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0213858_100372011	3300021356	Seawater	IILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0222717_100821741	3300021957	Estuarine Water	LDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS
Ga0222652_10091061	3300022853	Saline Water	MKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKN
Ga0255775_10923421	3300022907	Salt Marsh	FIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0255755_10409433	3300022909	Salt Marsh	YKDFLIYPSYAAGGAFIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0255758_100449544	3300022928	Salt Marsh	DFLIYPSYAAGGAFIKKRINTGLFKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0255752_101468201	3300022929	Salt Marsh	FKKLKKGEVYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMKILSTLRDKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKAINKFQNKNLKNVYNIWEENLYKKKLFNSS
Ga0255774_105225612	3300023087	Salt Marsh	KNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
(restricted) Ga0233432_102544212	3300023109	Seawater	TIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNDS
Ga0255759_100834473	3300023178	Salt Marsh	TIILDGPITKNPTIMKLLSSLRTKQVVLKNKKEIGTSLGATNLFDIKRKNKLDTVIIKKIHSNSLQNIFQLWEANLYKKELFSYP
Ga0222676_10136802	3300023240	Saline Water	MKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS
Ga0222655_10353531	3300023245	Saline Water	LICVYISFVINFCLNKMKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS
Ga0222688_10402711	3300023293	Saline Water	CVYISFVINFCLNKMKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS
Ga0228602_10991571	3300024188	Seawater	NIKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKINSTNTIILYGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKRNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228637_10139951	3300024192	Seawater	YLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228666_10092824	3300024221	Seawater	DGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228667_11031882	3300024226	Seawater	PSYEAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0233402_10241152	3300024229	Seawater	GPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228638_10322802	3300024230	Seawater	NTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0233399_10263943	3300024231	Seawater	AEIYYLCLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228653_10229891	3300024237	Seawater	YKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228675_10335082	3300024247	Seawater	TSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228676_10619971	3300024248	Seawater	LIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228677_10207942	3300024250	Seawater	ILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
(restricted) Ga0233438_101413114	3300024255	Seawater	PITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSNS
(restricted) Ga0233444_103950342	3300024264	Seawater	FKYSDYLIYPSYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS
Ga0228661_10774051	3300024266	Seawater	YMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228660_10394061	3300024291	Seawater	TIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228630_10118051	3300024292	Seawater	LYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228629_10818572	3300024296	Seawater	YYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228657_10105194	3300024314	Seawater	GGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228618_10070601	3300024315	Seawater	KRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0233400_10102125	3300024318	Seawater	PITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228626_10202171	3300024321	Seawater	TKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
(restricted) Ga0233443_12738542	3300024324	Seawater	KRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNDS
Ga0228672_10494572	3300024335	Seawater	LKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228628_10221212	3300024359	Seawater	AFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228632_10093431	3300024420	Seawater	SNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0209666_10804301	3300025870	Marine	NFKYSDYLIYPSYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS
Ga0209425_103815221	3300025897	Pelagic Marine	AAGGAFLKKKVNTSLFKKLKKGEIYYLICLYMAFLINFCLNKMNSKNTIILDGPITKNDCIMRILSTLRSKQIVLKNKKEIGTSLGATNLFDIKKKNKLDTKSINKYQNKTFKNVYNIWEENLYKKKLFNKS
Ga0228641_11006162	3300026491	Seawater	KKLKKAEIYYLICLYIAFLINFCLNKLNSANTIILDGPITKNNSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYSIWEGNLYKKKLFNNS
Ga0247590_10259373	3300026513	Seawater	IILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0208970_10315091	3300027298	Marine	LICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0209384_11262892	3300027522	Marine	MLFHNHFCLNKMKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSLEKIYKNWENNLFKKDMFSHS
Ga0209830_101953792	3300027791	Marine	RLNKAQIYFLICIYISFVINFCLNKMKSSNTIILDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS
Ga0209359_101269591	3300027830	Marine	TKALKNFDYNDYLIYPSYASGGAFANKKININLFKKLNRGQIYYLICLYIAFVINFCLNTIKSSNTIILDGPITKNITIMKILSSLREKQLVLKNKKEIGTTLGATNLFNINKKNKLQTVTISKYQNKSLKSLYQLWEKNLYRKELFSHSK
Ga0228621_10086572	3300028124	Seawater	SYAAGGAFIKKRINTKLYKKLKKTEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0233401_10276002	3300028127	Seawater	LDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228645_10152682	3300028128	Seawater	DYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228619_10181151	3300028130	Seawater	FNITSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228608_10217671	3300028136	Seawater	GREYDNLIKTFNITSNTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKSEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0257114_11615161	3300028196	Marine	ICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNDS
Ga0257114_11904371	3300028196	Marine	KNFNYNDYLIYPSYAAGGAFKQHHIDTNLFKGLNKGQIYFLICVYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRKQTVLKNKKEIGTSLGATNLFDIKRKNKLLTTTINKYQNHSFETVYKNWENKLYEKKMFSHS
Ga0228640_10168502	3300028273	Seawater	KFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFDINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0247572_10188521	3300028290	Seawater	AFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0228627_10282561	3300028414	Seawater	NTKPLSKFNFEDYLIYPSYAAGGAFIKKRINTKLYKKLKKAEIYYLICLYMAFLINFCLNKMNSTNTIILDGPITKNDCIMRILSSLRDKQIVLKNKKEIGTSLGATNLFNINKKNKLDTKSINKYQNKSFKNVYNIWEGNLYKKKLFNNS
Ga0307488_101008721	3300031519	Sackhole Brine	YFLICIYISFVMNFCLNKMKSSNTIILDGPITKNETIMKILSTLRRTQTVLKNKKEIGTSLGATNLFNIKKKNKLQTITINKYQNQSFETIYKNWENNLFKKEMFSHS
Ga0302114_102874301	3300031621	Marine	KYNINTNLFKRLNKGQIYFLICIYISFVINFCLNKMKSSNTIIFDGPITKNETIMKILSTLRIKQTVLKNKKEIGTSLGATNLFNIKRKNKLQTITINKYQNQSFEKIYKNWENNLFKKNMFRHS
Ga0315320_101000493	3300031851	Seawater	AFIKKRINTKLYKKLKKAEIYYLICLYIAFLINFCLNKLNSANTIILDGPITKNNSIMRILSTLRDKQTVLKNKKEIGTSLGATNLFDIDKKNKLDTKSISKYQNKSFKNVYSIWEGNLYKKKLFNNS
Ga0315330_102029012	3300032047	Seawater	LICLYIAFVINFCLNTIKSSNTIILDGPITKNITIMKILSSLREKQLVLKNKKEIGTTLGATNLFNINKKNKLQTVTISKYQNKSLKTLYQLWEKNLYRKELFSHSK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055008

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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