NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F055006

Metagenome / Metatranscriptome Family F055006

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F055006
Family Type Metagenome / Metatranscriptome
Number of Sequences 139
Average Sequence Length 70 residues
Representative Sequence MWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGERAWKGRSYQCNKLPGGML
Number of Associated Samples 107
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.82 %
% of genes near scaffold ends (potentially truncated) 35.25 %
% of genes from short scaffolds (< 2000 bps) 80.58 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.273 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(35.971 % of family members)
Environment Ontology (ENVO) Unclassified
(69.784 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.295 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 36.11%    β-sheet: 8.33%    Coil/Unstructured: 55.56%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF07486Hydrolase_2 27.34
PF01970TctA 2.16
PF05050Methyltransf_21 2.16
PF04055Radical_SAM 2.16
PF02310B12-binding 1.44
PF00474SSF 0.72
PF01583APS_kinase 0.72
PF01041DegT_DnrJ_EryC1 0.72
PF01713Smr 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 27.34
COG1784TctA family transporterGeneral function prediction only [R] 2.16
COG3333TctA family transporterGeneral function prediction only [R] 2.16
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.72
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.72
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.72
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 0.72
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.72
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.72
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.27 %
All OrganismsrootAll Organisms41.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10010211Not Available6079Open in IMG/M
3300000101|DelMOSum2010_c10249973All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon559Open in IMG/M
3300001450|JGI24006J15134_10120527All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium906Open in IMG/M
3300001450|JGI24006J15134_10249877Not Available510Open in IMG/M
3300001460|JGI24003J15210_10008951All Organisms → Viruses → Predicted Viral4121Open in IMG/M
3300001460|JGI24003J15210_10014511All Organisms → cellular organisms → Bacteria → Proteobacteria3109Open in IMG/M
3300001460|JGI24003J15210_10015760All Organisms → cellular organisms → Bacteria → Proteobacteria2964Open in IMG/M
3300001460|JGI24003J15210_10036909Not Available1732Open in IMG/M
3300001460|JGI24003J15210_10051592All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1369Open in IMG/M
3300001472|JGI24004J15324_10143712Not Available559Open in IMG/M
3300001589|JGI24005J15628_10216840Not Available525Open in IMG/M
3300002482|JGI25127J35165_1013544All Organisms → cellular organisms → Bacteria → Proteobacteria2051Open in IMG/M
3300004097|Ga0055584_102401745Not Available534Open in IMG/M
3300004448|Ga0065861_1133692Not Available1086Open in IMG/M
3300005941|Ga0070743_10034196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371750Open in IMG/M
3300006191|Ga0075447_10069572All Organisms → Viruses → Predicted Viral1260Open in IMG/M
3300006752|Ga0098048_1032555All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1693Open in IMG/M
3300006802|Ga0070749_10305259Not Available891Open in IMG/M
3300006810|Ga0070754_10201186Not Available928Open in IMG/M
3300006870|Ga0075479_10398017Not Available532Open in IMG/M
3300006916|Ga0070750_10209985Not Available858Open in IMG/M
3300006924|Ga0098051_1199082Not Available524Open in IMG/M
3300007539|Ga0099849_1032660All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300007539|Ga0099849_1341649Not Available534Open in IMG/M
3300007640|Ga0070751_1162807Not Available886Open in IMG/M
3300007692|Ga0102823_1074807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37900Open in IMG/M
3300008221|Ga0114916_1074604All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage872Open in IMG/M
3300008470|Ga0115371_11077986Not Available2389Open in IMG/M
3300009000|Ga0102960_1175406Not Available768Open in IMG/M
3300009001|Ga0102963_1046489Not Available1799Open in IMG/M
3300009024|Ga0102811_1174605Not Available804Open in IMG/M
3300009071|Ga0115566_10138972All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1526Open in IMG/M
3300009080|Ga0102815_10386785Not Available777Open in IMG/M
3300009149|Ga0114918_10110055Not Available1696Open in IMG/M
3300009149|Ga0114918_10308341Not Available883Open in IMG/M
3300009149|Ga0114918_10498237Not Available652Open in IMG/M
3300009172|Ga0114995_10091967All Organisms → Viruses → Predicted Viral1704Open in IMG/M
3300009172|Ga0114995_10255970All Organisms → cellular organisms → Bacteria → Proteobacteria967Open in IMG/M
3300009172|Ga0114995_10533541Not Available641Open in IMG/M
3300009172|Ga0114995_10573247Not Available617Open in IMG/M
3300009172|Ga0114995_10803057Not Available515Open in IMG/M
3300009173|Ga0114996_11257956Not Available516Open in IMG/M
3300009420|Ga0114994_10704450Not Available659Open in IMG/M
3300009425|Ga0114997_10046579All Organisms → Viruses → Predicted Viral2804Open in IMG/M
3300009428|Ga0114915_1160776Not Available633Open in IMG/M
3300009432|Ga0115005_11800823Not Available502Open in IMG/M
3300009435|Ga0115546_1019225All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2920Open in IMG/M
3300009449|Ga0115558_1108737All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1205Open in IMG/M
3300009512|Ga0115003_10353406All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300009526|Ga0115004_10408578All Organisms → cellular organisms → Bacteria → Proteobacteria804Open in IMG/M
3300009529|Ga0114919_10330480Not Available1067Open in IMG/M
3300009785|Ga0115001_10321978All Organisms → cellular organisms → Bacteria → Proteobacteria977Open in IMG/M
3300009786|Ga0114999_10720179Not Available745Open in IMG/M
3300010368|Ga0129324_10349459Not Available576Open in IMG/M
3300010392|Ga0118731_115416349Not Available600Open in IMG/M
3300012919|Ga0160422_10064927All Organisms → Viruses → Predicted Viral2127Open in IMG/M
3300013010|Ga0129327_10013454All Organisms → cellular organisms → Bacteria → Proteobacteria4434Open in IMG/M
3300016797|Ga0182090_1237363Not Available1352Open in IMG/M
3300017697|Ga0180120_10201489Not Available824Open in IMG/M
3300017724|Ga0181388_1165368Not Available524Open in IMG/M
3300017727|Ga0181401_1011096Not Available2842Open in IMG/M
3300017746|Ga0181389_1104796Not Available776Open in IMG/M
3300017746|Ga0181389_1122380Not Available705Open in IMG/M
3300017753|Ga0181407_1067473Not Available921Open in IMG/M
3300017762|Ga0181422_1242765Not Available534Open in IMG/M
3300017767|Ga0181406_1186732All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon618Open in IMG/M
3300017771|Ga0181425_1114755Not Available860Open in IMG/M
3300017786|Ga0181424_10201537Not Available843Open in IMG/M
3300017824|Ga0181552_10035343All Organisms → cellular organisms → Bacteria → Proteobacteria3023Open in IMG/M
3300017824|Ga0181552_10137812All Organisms → Viruses → Predicted Viral1313Open in IMG/M
3300017950|Ga0181607_10589625Not Available585Open in IMG/M
3300018410|Ga0181561_10338282Not Available693Open in IMG/M
3300018417|Ga0181558_10331180Not Available823Open in IMG/M
3300020165|Ga0206125_10021543All Organisms → cellular organisms → Bacteria → Proteobacteria3825Open in IMG/M
3300020165|Ga0206125_10168895Not Available868Open in IMG/M
3300020191|Ga0181604_10325856Not Available688Open in IMG/M
3300020376|Ga0211682_10369860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage526Open in IMG/M
3300020419|Ga0211512_10245727Not Available816Open in IMG/M
3300020436|Ga0211708_10251006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage715Open in IMG/M
3300020440|Ga0211518_10001625Not Available17992Open in IMG/M
3300020463|Ga0211676_10018980All Organisms → cellular organisms → Bacteria5522Open in IMG/M
3300020810|Ga0181598_1163568Not Available885Open in IMG/M
3300021085|Ga0206677_10129620All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300021185|Ga0206682_10000066Not Available98237Open in IMG/M
3300021185|Ga0206682_10087722All Organisms → Viruses → Predicted Viral1572Open in IMG/M
3300021365|Ga0206123_10264651All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon742Open in IMG/M
3300021375|Ga0213869_10001852Not Available15270Open in IMG/M
3300021375|Ga0213869_10081385All Organisms → Viruses → Predicted Viral1609Open in IMG/M
3300021958|Ga0222718_10023397All Organisms → cellular organisms → Bacteria → Proteobacteria4242Open in IMG/M
3300021960|Ga0222715_10627066Not Available551Open in IMG/M
3300021964|Ga0222719_10298817Not Available1045Open in IMG/M
3300024228|Ga0228633_1111542Not Available630Open in IMG/M
3300024247|Ga0228675_1055312Not Available827Open in IMG/M
3300024262|Ga0210003_1015198Not Available4960Open in IMG/M
3300024262|Ga0210003_1175171Not Available899Open in IMG/M
(restricted) 3300024264|Ga0233444_10007914Not Available9087Open in IMG/M
3300024281|Ga0228610_1045385Not Available604Open in IMG/M
3300024346|Ga0244775_10008956Not Available9681Open in IMG/M
3300025048|Ga0207905_1001778Not Available4547Open in IMG/M
3300025083|Ga0208791_1049365All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300025120|Ga0209535_1023299Not Available3078Open in IMG/M
3300025120|Ga0209535_1034624All Organisms → Viruses → Predicted Viral2337Open in IMG/M
3300025120|Ga0209535_1064030All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300025120|Ga0209535_1079640Not Available1249Open in IMG/M
3300025120|Ga0209535_1088189All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1150Open in IMG/M
3300025120|Ga0209535_1097976All Organisms → cellular organisms → Bacteria → Proteobacteria1058Open in IMG/M
3300025120|Ga0209535_1102294All Organisms → cellular organisms → Bacteria → Proteobacteria1022Open in IMG/M
3300025120|Ga0209535_1160868Not Available691Open in IMG/M
3300025138|Ga0209634_1057608All Organisms → Viruses → Predicted Viral1883Open in IMG/M
3300025138|Ga0209634_1142389All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon991Open in IMG/M
3300025168|Ga0209337_1136368All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium1083Open in IMG/M
3300025276|Ga0208814_1007126Not Available4211Open in IMG/M
3300026183|Ga0209932_1079518Not Available748Open in IMG/M
3300026183|Ga0209932_1122992Not Available556Open in IMG/M
3300027571|Ga0208897_1052403All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300027668|Ga0209482_1176615All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage609Open in IMG/M
3300027687|Ga0209710_1064866Not Available1578Open in IMG/M
3300027687|Ga0209710_1078209All Organisms → Viruses → Predicted Viral1376Open in IMG/M
3300027687|Ga0209710_1132560All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300027779|Ga0209709_10223394Not Available857Open in IMG/M
3300027788|Ga0209711_10140228Not Available1172Open in IMG/M
3300027791|Ga0209830_10027948Not Available3191Open in IMG/M
3300028115|Ga0233450_10323425Not Available644Open in IMG/M
3300028127|Ga0233401_1119669All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon592Open in IMG/M
3300028197|Ga0257110_1144662All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon960Open in IMG/M
3300028282|Ga0256413_1356209Not Available512Open in IMG/M
3300031175|Ga0308020_1105347All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage792Open in IMG/M
3300031519|Ga0307488_10109702All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1996Open in IMG/M
3300031519|Ga0307488_10161193All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300031542|Ga0308149_1022145Not Available796Open in IMG/M
3300031594|Ga0302131_1144145Not Available805Open in IMG/M
3300031598|Ga0308019_10242205All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage686Open in IMG/M
3300031626|Ga0302121_10089619Not Available911Open in IMG/M
3300031628|Ga0308014_1045695All Organisms → Viruses → Predicted Viral1087Open in IMG/M
3300031637|Ga0302138_10037210All Organisms → Viruses → Predicted Viral1951Open in IMG/M
3300031637|Ga0302138_10108002Not Available996Open in IMG/M
3300031675|Ga0302122_10265975Not Available618Open in IMG/M
3300031694|Ga0308015_10112019All Organisms → Viruses → Predicted Viral1122Open in IMG/M
3300034418|Ga0348337_182760Not Available546Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine35.97%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.47%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.47%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.76%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.04%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.04%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface4.32%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.88%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water2.88%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.16%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.16%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.16%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.16%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.16%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.16%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.16%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.16%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.44%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.44%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.72%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.72%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.72%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.72%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.72%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.72%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.72%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300016797Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300020419Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020440Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300024228Seawater microbial communities from Monterey Bay, California, United States - 41DEnvironmentalOpen in IMG/M
3300024247Seawater microbial communities from Monterey Bay, California, United States - 36D_rEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024281Seawater microbial communities from Monterey Bay, California, United States - 11DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300028115Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)EnvironmentalOpen in IMG/M
3300028127Seawater microbial communities from Monterey Bay, California, United States - 49DEnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031175Marine microbial communities from water near the shore, Antarctic Ocean - #349EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031542Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_331_5m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031594Marine microbial communities from Western Arctic Ocean, Canada - CB9_20mEnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031628Marine microbial communities from water near the shore, Antarctic Ocean - #229EnvironmentalOpen in IMG/M
3300031637Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031694Marine microbial communities from water near the shore, Antarctic Ocean - #231EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_10010211123300000101MarineMWKAVLVVCSIGSPDKCETWQDMMGPSVSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
DelMOSum2010_1024997323300000101MarineMWKAVLVVCSIGSPDKCETWQDMTGPSVSYQACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
JGI24006J15134_1012052743300001450MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYDACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
JGI24006J15134_1024987723300001450MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEQAWKGRSYQCDKLPGGML*
JGI24003J15210_1000895113300001460MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEQAWKGRSYQ
JGI24003J15210_1001451153300001460MarineMWKAVLVVCSIGSPDKCETWQDMTGPSVSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
JGI24003J15210_1001576013300001460MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLXGWKGEQAWKGRSYQCDKLPGGML*
JGI24003J15210_1003690913300001460MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
JGI24003J15210_1005159213300001460MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYDACVERAMQMNEDAFKHLQFYKGERAWKGRSYQC
JGI24004J15324_1014371223300001472MarineMWKAVLVVCSMTAPDKCETWVDAIGPSASYEACVLRALEMNADAFKSLAWYKGQQAWKGRSYQCNKLPGGML*
JGI24005J15628_1021684023300001589MarineLVVCSIGSPDKCETWQDMIGPSASYEACVERAMQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
JGI25127J35165_101354443300002482MarineMWKAMVIVCSITAPDKCETWVDAIGPSKSYEQCVERALQMSKDAFVHLRDYNGEIAWKGKRYQCNKLPGGML*
Ga0055584_10240174513300004097Pelagic MarineMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCDKLPGGML*
Ga0065861_113369233300004448MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYDACVTRALEMNADAFEWLQGWKGQQAWKGRSYQCNKLPGGML*
Ga0070743_1003419653300005941EstuarineMWKAVLVVCSIGSPDKCETWQDMIGPSVSYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0075447_1006957223300006191MarineMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML*
Ga0098048_103255523300006752MarineMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0070749_1030525923300006802AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCIDRALEMNEHAFTHLRNYKGEPAWKGRSYQCNKLPNGTL*
Ga0070754_1020118633300006810AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRNYKGEPAWKGRSYQCDKLPGGML*
Ga0075479_1039801723300006870AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL*
Ga0070750_1020998523300006916AqueousMWKAVLVVCSITSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL*
Ga0098051_119908223300006924MarineMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0099849_103266033300007539AqueousMWKAVVVVCSLTAPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCNKLPGGML*
Ga0099849_134164933300007539AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNK
Ga0070751_116280733300007640AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCDKLPNGTL*
Ga0102823_107480733300007692EstuarineMWKAVLVVCSIGSPDKCETWQDMIGPSATYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0114916_107460413300008221Deep OceanAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0115371_1107798653300008470SedimentSMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYQCNKLPGGML*
Ga0102960_117540623300009000Pond WaterMWKAVLIVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL*
Ga0102963_104648933300009001Pond WaterMWKAVVVVCSLTAPDTCETWIDAIGPSKNRDQCISRALEMNAHAFTHLRDYKGEPAWKGKSYRCDKLPNGAL*
Ga0102811_117460513300009024EstuarineSLCIRRSSMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML*
Ga0115566_1013897223300009071Pelagic MarineMWKAVLVVCSIGSPDKCESWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0102815_1038678523300009080EstuarineMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML*
Ga0114918_1011005523300009149Deep SubsurfaceMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCDKLPGGML*
Ga0114918_1030834123300009149Deep SubsurfaceMTSPDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEPAWKGRSYQCNKLPGGML*
Ga0114918_1049823723300009149Deep SubsurfaceMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFNHLRDYKGEPAWKGRSYQCNKLPNGTL*
Ga0114995_1009196733300009172MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML*
Ga0114995_1025597033300009172MarineMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML*
Ga0114995_1053354113300009172MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKG
Ga0114995_1057324713300009172MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQPAWKGRSYQCNKLPGGML*
Ga0114995_1080305713300009172MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKG
Ga0114996_1125795623300009173MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGG
Ga0114994_1070445023300009420MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML*
Ga0114997_1004657953300009425MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML*
Ga0114915_116077613300009428Deep OceanMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNK
Ga0115005_1180082323300009432MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYDACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML*
Ga0115546_101922553300009435Pelagic MarineVVCSLTAPDKCETWIDAIGPSKNRDKCISRALEMNAHAFTHLRDYKGEPAWKGKSYRCDKLPNGEL*
Ga0115558_110873713300009449Pelagic MarineAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0115003_1035340613300009512MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGERAWKGRSYQCNKLPGGML*
Ga0115004_1040857833300009526MarineMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQC
Ga0114919_1033048033300009529Deep SubsurfaceMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRNYKGEPAWKGRSYQCNKLPSGML*
Ga0115001_1032197813300009785MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQPAWKGRSY
Ga0114999_1072017933300009786MarineMWKAVLVVCSMTSPDKCKTWTDAIGPSKSYEACVTRALEMNADAFEWLQGWNGERAWNGRSYQCDKLPGGML*
Ga0129324_1034945923300010368Freshwater To Marine Saline GradientMWKAVLVVCSLTSPDNCETWVDAIGPSKSYEQCINRALKMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL*
Ga0118731_11541634913300010392MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRVLEMNADAFEWLQGWKGEQAWKGRSYQCDKLPGGML*
Ga0160422_1006492733300012919SeawaterMWKAMVIVCSITAPDKCETWVDAIGPSKSYEQCVERALQMSKDAFVYLRDYNGEIAWKGKRYQCNKLPGGML*
Ga0129327_1001345473300013010Freshwater To Marine Saline GradientMWKAVLVVCSIGSPDKCETWQDMMGPSTSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML*
Ga0182090_123736313300016797Salt MarshKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0180120_1020148923300017697Freshwater To Marine Saline GradientMWKAVVVVCSLTAPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCDKLPGGML
Ga0181388_116536823300017724SeawaterLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML
Ga0181401_101109653300017727SeawaterVCSIGSPDKCETWVDAIGPSKTYEACIDRALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181389_110479633300017746SeawaterMWKAVLVVCSIGSPDKCETWQDMIGPSVSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181389_112238033300017746SeawaterCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML
Ga0181407_106747323300017753SeawaterMWKAVLVVCSIGSPDKCETWQDMIGPSTSYEACVERALEMNEDAFKHLQFYKGERAWKVRSYQCNKLPGGML
Ga0181422_124276513300017762SeawaterVLVVCSIGSPDKCETWQDMIGPSTSYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181406_118673213300017767SeawaterFNYWKGSGIMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181425_111475533300017771SeawaterMWKAILVVCSIGSPDKCETWQDMIGPSTSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181424_1020153713300017786SeawaterNYWKGSGIMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181552_1003534323300017824Salt MarshMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCNKLPGGML
Ga0181552_1013781233300017824Salt MarshMWKAVLVVCSITSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0181607_1058962523300017950Salt MarshMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEECINRALEMNEHAFTHLRYYKGEPAWKGRSYQCNKLPGGML
Ga0181561_1033828223300018410Salt MarshMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0181558_1033118013300018417Salt MarshTSPDKCETWVDAIGPSKSYEECINRALEMNEHAFTHLRYYKGEPAWKGRSYQCNKLPGGM
Ga0206125_1002154333300020165SeawaterMWKAVLVVCSIGSPDKCESWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0206125_1016889523300020165SeawaterMWKAVLVVCSIGSPDKCETWQDMMGPSVSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181604_1032585613300020191Salt MarshRNSMWKAVLVVCSITSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0211682_1036986023300020376MarineSMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0211512_1024572723300020419MarineMWKAILVVCSIGSPDKCETWVDAIGPSKTYEACIDRALEMNEDAFKHLQFYKGERAWKGKSYQCNKLPGGML
Ga0211708_1025100623300020436MarineMWKAMVIVCSITAPDKCETWVDAIGPSKSYEQCVERALQMSKDAFVHLRDYNGEIAWKGKRYQCNKLPGGML
Ga0211518_1000162553300020440MarineMWKAVLVVCSIGSPDKCETWQDMTGPSKTYEACVDRALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0211676_1001898093300020463MarineMWKAVLVVCSIGSPDKCETWVDAIGPSKTYEACIDRALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0181598_116356833300020810Salt MarshVVCSITSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0206677_1012962033300021085SeawaterMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML
Ga0206682_10000066553300021185SeawaterMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0206682_1008772223300021185SeawaterMWKAVLVVCSIGSPDKCETWQDMIGPSTSYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0206123_1026465123300021365SeawaterNMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0213869_10001852203300021375SeawaterMWKAVLVVCSIGSPDKCETWQDMMGPSTSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0213869_1008138543300021375SeawaterMWKAVVVVCSLTAPDKCETWIDAIGPSKNFDQCISRALEMNAHAFTHLRDYKGEPAWKGKSYRCDKLPNGAL
Ga0222718_1002339783300021958Estuarine WaterMWKAVVVVCSLTAPDTCETWIDAIGPSKNRDQCISRALEMNAHAFTHLRDYKGEPAWKGKSYRCDKLPNGAL
Ga0222715_1062706623300021960Estuarine WaterMWKAVLIVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0222719_1029881743300021964Estuarine WaterMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALQMNEDAFTHLQFYKGERAWKGKSYQCNKLPGGML
Ga0228633_111154233300024228SeawaterMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQ
Ga0228675_105531233300024247SeawaterMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKG
Ga0210003_101519853300024262Deep SubsurfaceMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRYYKGEPAWKGRSYQCDKLPGGML
Ga0210003_117517123300024262Deep SubsurfaceMWKAVLVVCSMTSPDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEPAWKGRSYQCNKLPGGML
(restricted) Ga0233444_10007914143300024264SeawaterMWKAVLVVCSIGSPDKCETWQDMVGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0228610_104538523300024281SeawaterTMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML
Ga0244775_10008956143300024346EstuarineMWKAVLVVCSIGSPDKCETWQDMIGPSVSYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0207905_100177833300025048MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0208791_104936513300025083MarineMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_102329953300025120MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYDACVERALQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_103462443300025120MarineMWKAVLVVCSIGSPDKCETWQDMTGPSVSYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_106403033300025120MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEQAWKGRSYQCDKLPGGML
Ga0209535_107964023300025120MarineMWKAVLVVCSIGSPDKCETWQDMIGPSATYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_108818913300025120MarineSMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEQAWKGRSYQCDKLPGGML
Ga0209535_109797613300025120MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYDACVERAMQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_110229413300025120MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYEACVERAMQMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209535_116086833300025120MarineMWKAVLVVCSIGSPDKCETWQDMTGPSVSYQACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0209634_105760843300025138MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGERAWKGRSYQCNKLPGGML
Ga0209634_114238923300025138MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLRGWKGEQAWKGRSYQCDKLPGGML
Ga0209337_113636813300025168MarineMWKAVLVVCSIGSPDKCETWQDMIGPSASYEACVERAMQMNEDAFKHLQFYKGERAWKGRSYQCNKLPG
Ga0208814_100712663300025276Deep OceanMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0209932_107951813300026183Pond WaterMWKAVVVVCSLTAPDTCETWIDAIGPSKNRDQCISRALEMNAHAFTHLRDYKGEPAWKGK
Ga0209932_112299213300026183Pond WaterAVLIVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0208897_105240313300027571EstuarineRRSSMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVDRALKMNEDAFVHLRDYKGEAAWKGRSYQCNKLPGGML
Ga0209482_117661513300027668MarineRNSMWKAVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0209710_106486633300027687MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0209710_107820943300027687MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0209710_113256023300027687MarineMWKAVLVVCSMTAPDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0209709_1022339423300027779MarineDKCETWVDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0209711_1014022833300027788MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0209830_1002794823300027791MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0233450_1032342523300028115Salt MarshVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRDYKGEPAWKGRSYQCNKLPNGTL
Ga0233401_111966913300028127SeawaterGWRSSMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKLPGGML
Ga0257110_114466213300028197MarineMWKAVLVVCSIGSPDKCETWQDMIGPSATYEACVERALEMNEDAFNHLQFYKGERAWKGRSYQCNKLPGGML
Ga0256413_135620923300028282SeawaterMWKAVLVVCSIGSPDKCETWQDMMGPSQTYEACVERALEMNEDAFKHLQFYKGERAWKGRSYQCNKL
Ga0308020_110534723300031175MarineVLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0307488_1010970233300031519Sackhole BrineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGERAWKGRSYQCNKLPGGML
Ga0307488_1016119313300031519Sackhole BrineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGEQAWKGRSYQCNKLPGGML
Ga0308149_102214523300031542MarineMWKAVLVVCSMTSPDKSETWTDAIGPSKSYEACVNRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0302131_114414513300031594MarineNSMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0308019_1024220513300031598MarineLVVCSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0302121_1008961913300031626MarineRNSMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGML
Ga0308014_104569513300031628MarineSMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0302138_1003721053300031637MarineTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPGGM
Ga0302138_1010800213300031637MarineMWKAVLVVCSMTSPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSYQCNKLPG
Ga0302122_1026597513300031675MarineMWKAVLVVCSMTAPDKCETWTDAIGPSKSYEACVTRALEMNADAFEWLQGWKGQRAWKGRSY
Ga0308015_1011201943300031694MarineMTAPDKCETWIDAIGPSKSYEACVSRALEMNADAFEWLQGWKGQPAWKGRSYECNKLPGGML
Ga0348337_182760_243_4613300034418AqueousMWKAVLVVCSLTSPDKCETWVDAIGPSKSYEQCINRALEMNEHAFTHLRNYKGEPAWKGRSYQCNKLPNGTL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.